ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart31b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188347.1| Oryza sativa (japonica cultivar-group), Ozsa8098 predicted mRNA Length = 1206 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 38 ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccggcgtga 97 |||||||||| |||||| ||| | ||||||||||| ||| |||| |||||||||| |||| Sbjct: 1019 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccggagtga 1078 Query: 98 tctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 148 ||||||||||||||||||||| ||| | |||| |||||||||||||||||| Sbjct: 1079 tctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 1129
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 94 gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 148 ||||||||||||||||||||||||| ||| | |||| |||||||||||||||||| Sbjct: 5807209 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 5807263 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 38 ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 92 |||||||||| |||||| ||| | ||||||||||| ||| |||| |||||||||| Sbjct: 5807055 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 5807109 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||||||| |||||| Sbjct: 32006337 agcaggaggaggcgtccggcgcggc 32006313
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 94 gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 148 ||||||||||||||||||||||||| ||| | |||| |||||||||||||||||| Sbjct: 10950 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 11004 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 38 ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 92 |||||||||| |||||| ||| | ||||||||||| ||| |||| |||||||||| Sbjct: 10796 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 10850
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 94 gtgatctgcaccaaggccatcaacatgtatctcgaccacgagcgcaagcaggagg 148 ||||||||||||||||||||||||| ||| | |||| |||||||||||||||||| Sbjct: 131911 gtgatctgcaccaaggccatcaacacgtaccgcgactacgagcgcaagcaggagg 131965 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 38 ccgccggcgaagcctccaccacggtcctccgcttcttctccttcatcggcgccgg 92 |||||||||| |||||| ||| | ||||||||||| ||| |||| |||||||||| Sbjct: 131757 ccgccggcgaggcctcctccaagctcctccgcttcctctgcttcgtcggcgccgg 131811
>gb|AC153637.11| Mus musculus 6 BAC RP23-313A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226751 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 460 taataatacccctgttacacttt 482 ||||||||||||||||||||||| Sbjct: 208707 taataatacccctgttacacttt 208685
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05, complete sequence Length = 107407 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tccgcttcttctccttcatcggcgccggcg 94 ||||| ||||||||| |||||||||||||| Sbjct: 45207 tccgcgtcttctcctgcatcggcgccggcg 45236
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tccgcttcttctccttcatcggcgccggcg 94 ||||| ||||||||| |||||||||||||| Sbjct: 20311617 tccgcgtcttctcctgcatcggcgccggcg 20311646 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccgccggcgaagcctccaccacg 60 ||||||||||| |||||||||||| Sbjct: 20177044 gccgccggcgatgcctccaccacg 20177067
>dbj|AK068601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153B01, full insert sequence Length = 690 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 tccgcttcttctccttcatcggcgccggcg 94 ||||| ||||||||| |||||||||||||| Sbjct: 347 tccgcgtcttctcctgcatcggcgccggcg 376
>ref|XM_463438.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||||||| |||||| Sbjct: 47 agcaggaggaggcgtccggcgcggc 71
>gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus associated protein C1a-34 mRNA, complete cds Length = 921 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||| |||||||||| Sbjct: 578 agcaggaggaggcggccgccgcggc 602
>gb|AC163899.3| Mus musculus chromosome 1, clone RP24-383F13, complete sequence Length = 227890 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 tgttacacttttgtttgaaaa 492 ||||||||||||||||||||| Sbjct: 55480 tgttacacttttgtttgaaaa 55460
>emb|AJ001834.2|XLRNAIRO1 Xenopus laevis mRNA for an homeobox Iro protein 1 Length = 2069 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 157 gccgcggcagaagcagcagcggtcgcagc 185 |||||||||| ||||||||||| |||||| Sbjct: 402 gccgcggcagcagcagcagcggccgcagc 430
>emb|AL669852.6| Mouse DNA sequence from clone RP23-339F11 on chromosome 11, complete sequence Length = 116014 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 atctgcaccaaggccatcaac 117 ||||||||||||||||||||| Sbjct: 56724 atctgcaccaaggccatcaac 56704
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||||||| |||||| Sbjct: 48151 agcaggaggaggcgtccggcgcggc 48127
>dbj|AK107573.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-D05, full insert sequence Length = 1204 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||||||| |||||| Sbjct: 144 agcaggaggaggcgtccggcgcggc 168
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 agcaggaggaggcgtccgccgcggc 164 |||||||||||||||||| |||||| Sbjct: 103064 agcaggaggaggcgtccggcgcggc 103040
>ref|NM_202477.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.3 mRNA, complete cds Length = 2365 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 204 cagaagcagcagcggtagcagcca 181
>ref|NM_111020.2| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.1 mRNA, complete cds Length = 2392 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 234 cagaagcagcagcggtagcagcca 211
>ref|NM_180161.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.2 mRNA, complete cds Length = 2395 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 234 cagaagcagcagcggtagcagcca 211
>ref|NM_001035542.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant AT3G01540.4 mRNA, complete cds Length = 2289 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 234 cagaagcagcagcggtagcagcca 211
>ref|NM_014700.2| Homo sapiens RAB11 family interacting protein 3 (class II) (RAB11FIP3), mRNA Length = 4272 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 3187 ttcccccaccaccatgtccg 3168
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccgccggcgaagcctccaccacg 60 ||||||||||| |||||||||||| Sbjct: 65705 gccgccggcgatgcctccaccacg 65728
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcggcagaagcagcagcggt 179 |||||||||||||||||||| Sbjct: 1083576 gcggcagaagcagcagcggt 1083595
>gb|BC051360.1| Homo sapiens RAB11 family interacting protein 3 (class II), mRNA (cDNA clone MGC:59778 IMAGE:6646253), complete cds Length = 4272 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 3187 ttcccccaccaccatgtccg 3168
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccgccggcgaagcctccaccacg 60 ||||||||||| |||||||||||| Sbjct: 15316 gccgccggcgatgcctccaccacg 15339
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tcggcgccggcgtgatctgc 102 |||||||||||||||||||| Sbjct: 1010903 tcggcgccggcgtgatctgc 1010922
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tcatcggcgccggcgtgatc 99 |||||||||||||||||||| Sbjct: 1779018 tcatcggcgccggcgtgatc 1778999
>ref|XM_570633.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03920) partial mRNA Length = 985 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcggcagaagcagcagcggt 179 |||||||||||||||||||| Sbjct: 716 gcggcagaagcagcagcggt 697
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 38109 cagaagcagcagcggtagcagcca 38132
>emb|Z98882.4|HS356B8 Human DNA sequence from clone LA16c-356B8 on chromosome 16 Contains the 3' end of the RAB11FIP3 gene for RAB11 family interacting protein 3 (class II) and a CpG island, complete sequence Length = 36507 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 26399 ttcccccaccaccatgtccg 26380
>emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chromosome 1 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene and a CCR4-NOT transcription complex, subunit 7 (CNOT7) pseudogene, complete sequence Length = 96782 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 gttttatgtaatgtattgtgataa 372 ||||||||||||||||||| |||| Sbjct: 61881 gttttatgtaatgtattgtcataa 61858
>gb|AY130007.1| Homo sapiens MU-MB-17.148 mRNA, partial cds Length = 2368 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 1257 ttcccccaccaccatgtccg 1238
>gb|BT009670.1| Arabidopsis thaliana At3g01540 gene, complete cds Length = 1857 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 25 cagaagcagcagcggtagcagcca 2
>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8 Length = 260418 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 254010 ttcccccaccaccatgtccg 253991
>emb|CR622821.1| full-length cDNA clone CS0DF023YO22 of Fetal brain of Homo sapiens (human) Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 614 ttcccccaccaccatgtccg 595
>gb|AE012396.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 304 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cgccgccggcgaagcctcca 55 |||||||||||||||||||| Sbjct: 8763 cgccgccggcgaagcctcca 8782
>gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, complete sequence Length = 61958 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gccctgacctcggaggtggg 271 |||||||||||||||||||| Sbjct: 27665 gccctgacctcggaggtggg 27684
>gb|AF462866.1|AF462866 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA sequence Length = 2415 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 228 cagaagcagcagcggtagcagcca 205
>gb|AY062591.1| Arabidopsis thaliana RNA helicase, DRH1 (At3g01540; F4P13.9) mRNA, complete cds Length = 2264 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 228 cagaagcagcagcggtagcagcca 205
>gb|AF298118.1|AF298118 Zea mays putative transcription factor Golden2 gene, complete cds Length = 5168 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ccgccgcggcagaagcagcagcgg 178 |||||||||| ||||||||||||| Sbjct: 3966 ccgccgcggctgaagcagcagcgg 3989
>gb|AF428313.1|AF428313 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds Length = 2067 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 130 cagaagcagcagcggtagcagcca 107
>gb|AF395731.1|AF395731 Homo sapiens eferin mRNA, complete cds Length = 4080 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 3236 ttcccccaccaccatgtccg 3217
>gb|AY050375.1| Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds Length = 2165 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 228 cagaagcagcagcggtagcagcca 205
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccggcgaagcctcca 55 |||||||||||||||||||| Sbjct: 1557269 cgccgccggcgaagcctcca 1557250
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tccgccgccggcgaagcctccacc 57 |||||||||| ||||||||||||| Sbjct: 1624712 tccgccgccgccgaagcctccacc 1624689
>gb|AF318579.1|AF318579 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds Length = 2192 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ccgccgcggcagaagcagcagcgg 178 |||||||||| ||||||||||||| Sbjct: 1322 ccgccgcggctgaagcagcagcgg 1345
>emb|AL929088.23| Mouse DNA sequence from clone RP23-360J2 on chromosome 2, complete sequence Length = 77156 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 143 aggaggaggcgtccgccgcggcagaagcagcagcggtcgc 182 |||||| ||| || ||||| |||| ||||||||||||||| Sbjct: 64613 aggaggcggcctcagccgcagcagcagcagcagcggtcgc 64574
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 accatgtgaaattgtgaatg 418 |||||||||||||||||||| Sbjct: 28382528 accatgtgaaattgtgaatg 28382509
>emb|BX823517.1|CNS0A7FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2267 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 204 cagaagcagcagcggtagcagcca 181
>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence Length = 142193 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttctgttttatgtaatgtat 364 |||||||||||||||||||| Sbjct: 107574 ttctgttttatgtaatgtat 107555
>gb|AC011555.5|AC011555 Homo sapiens chromosome 19 clone LLNLR-280G7, complete sequence Length = 42546 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gccctgacctcggaggtggg 271 |||||||||||||||||||| Sbjct: 17405 gccctgacctcggaggtggg 17424
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 accatgtgaaattgtgaatg 418 |||||||||||||||||||| Sbjct: 108091 accatgtgaaattgtgaatg 108072
>dbj|AB014565.1| Homo sapiens mRNA for KIAA0665 protein, partial cds Length = 4080 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 3236 ttcccccaccaccatgtccg 3217
>dbj|AK120971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041G06, full insert sequence Length = 5151 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccgccggcgaagcctccaccacg 60 ||||||||||| |||||||||||| Sbjct: 232 gccgccggcgatgcctccaccacg 209
>dbj|AK065818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042K21, full insert sequence Length = 3553 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccgccggcgaagcctccaccacg 60 ||||||||||| |||||||||||| Sbjct: 232 gccgccggcgatgcctccaccacg 209
>gb|AY108112.1| Zea mays PCO067839 mRNA sequence Length = 773 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ccaccaccatgtccgccgccggcg 46 |||||||||||||| ||||||||| Sbjct: 601 ccaccaccatgtccaccgccggcg 578
>dbj|AP000462.2| Homo sapiens genomic DNA, chromosome 11q clone:B4H11, complete sequences Length = 114467 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cacttattctgttttatgta 358 |||||||||||||||||||| Sbjct: 47050 cacttattctgttttatgta 47031
>gb|AF038180.1|AF038180 Homo sapiens clone 23794 mRNA sequence Length = 1536 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttcccccaccaccatgtccg 37 |||||||||||||||||||| Sbjct: 633 ttcccccaccaccatgtccg 614
>dbj|AB010259.1| Arabidopsis thaliana mRNA for DRH1, complete cds Length = 1924 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cagaagcagcagcggtcgcagcca 187 |||||||||||||||| ||||||| Sbjct: 32 cagaagcagcagcggtagcagcca 9
>dbj|AB017654.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB4H11, complete sequence Length = 170965 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cacttattctgttttatgta 358 |||||||||||||||||||| Sbjct: 67418 cacttattctgttttatgta 67437 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,674,790 Number of Sequences: 3902068 Number of extensions: 4674790 Number of successful extensions: 119777 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119095 Number of HSP's gapped (non-prelim): 682 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
