Clone Name | bart31a10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_476727.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 1 atgtcgaacccgaagggctccaagatgctccagttcgtcaactaccggatgcgcgtgacg 60 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| ||||| || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 61 atccaggacgggcgccagctggtcggcaagttcatggcgttcgaccgccacatgaacctc 120 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 121 gtcctcggcgactgcgaggagttccgcaagctcccgccctccaagtcctccaagaccacc 180 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccgtggcgaggaggtcgtc 317 |||||||||||||||||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct: 181 ggcgagcgcgaggagcggaggacgctgggcctcctgctgctccgcggcgaggaggtcgtc 240 Query: 318 tccatgaccgtcgagggcccgcccccgcccgatgagtcccgggccaaggcc 368 ||||||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 241 tccatgaccgtcgagggcccgccaccgcccgacgagtcccgcgccaaggcc 291 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 442 tgctccaggcgcagcccggtctctctggccctgttcggggtgtaggcggtccggctcctg 501 |||||||||| ||||| || ||| | ||||| || || || || ||||| ||||| || | Sbjct: 365 tgctccaggcccagccagggctcgccggcccggtgcgtggcgtgggcgggccggcccccg 424 Query: 502 gcatgatgcagccgcagatctcgcgtccccctatgccgaacctctcagcgccgccggtcg 561 ||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 425 gcatgatgcagccgcagatctcgcgcccgccgatgccgaacctctcggcgccgccggtcg 484 Query: 562 catacccacaggtcgtccgcccgcc 586 | ||||| |||||||| |||||||| Sbjct: 485 cgtacccgcaggtcgtgcgcccgcc 509
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 3606663 atgtcgaacccgaagggctccaagatgctccagttcgtcaactaccggatgcgcgtgacg 3606722 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| ||||| || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 3606723 atccaggacgggcgccagctggtcggcaagttcatggcgttcgaccgccacatgaacctc 3606782 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 3606783 gtcctcggcgactgcgaggagttccgcaagctcccgccctccaagtcctccaagaccacc 3606842 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccgtggcgaggaggtcgtc 317 |||||||||||||||||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct: 3606843 ggcgagcgcgaggagcggaggacgctgggcctcctgctgctccgcggcgaggaggtcgtc 3606902 Query: 318 tccatgaccgtcgagggcccgcccccgcccgatgagtcccgggccaaggcc 368 ||||||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 3606903 tccatgaccgtcgagggcccgccaccgcccgacgagtcccgcgccaaggcc 3606953 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 442 tgctccaggcgcagcccggtctctctggccctgttcggggtgtaggcggtccggctcctg 501 |||||||||| ||||| || ||| | ||||| || || || || ||||| ||||| || | Sbjct: 3607027 tgctccaggcccagccagggctcgccggcccggtgcgtggcgtgggcgggccggcccccg 3607086 Query: 502 gcatgatgcagccgcagatctcgcgtccccctatgccgaacctctcagcgccgccggtcg 561 ||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 3607087 gcatgatgcagccgcagatctcgcgcccgccgatgccgaacctctcggcgccgccggtcg 3607146 Query: 562 catacccacaggtcgtccgcccgcc 586 | ||||| |||||||| |||||||| Sbjct: 3607147 cgtacccgcaggtcgtgcgcccgcc 3607171 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cctcgccgccgaaaccctaacc 35 |||||||||||||||||||||| Sbjct: 3606622 cctcgccgccgaaaccctaacc 3606643
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 75980 atgtcgaacccgaagggctccaagatgctccagttcgtcaactaccggatgcgcgtgacg 76039 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| ||||| || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 76040 atccaggacgggcgccagctggtcggcaagttcatggcgttcgaccgccacatgaacctc 76099 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 76100 gtcctcggcgactgcgaggagttccgcaagctcccgccctccaagtcctccaagaccacc 76159 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccgtggcgaggaggtcgtc 317 |||||||||||||||||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct: 76160 ggcgagcgcgaggagcggaggacgctgggcctcctgctgctccgcggcgaggaggtcgtc 76219 Query: 318 tccatgaccgtcgagggcccgcccccgcccgatgagtcccgggccaaggcc 368 ||||||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 76220 tccatgaccgtcgagggcccgccaccgcccgacgagtcccgcgccaaggcc 76270 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 442 tgctccaggcgcagcccggtctctctggccctgttcggggtgtaggcggtccggctcctg 501 |||||||||| ||||| || ||| | ||||| || || || || ||||| ||||| || | Sbjct: 76344 tgctccaggcccagccagggctcgccggcccggtgcgtggcgtgggcgggccggcccccg 76403 Query: 502 gcatgatgcagccgcagatctcgcgtccccctatgccgaacctctcagcgccgccggtcg 561 ||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 76404 gcatgatgcagccgcagatctcgcgcccgccgatgccgaacctctcggcgccgccggtcg 76463 Query: 562 catacccacaggtcgtccgcccgcc 586 | ||||| |||||||| |||||||| Sbjct: 76464 cgtacccgcaggtcgtgcgcccgcc 76488 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cctcgccgccgaaaccctaacc 35 |||||||||||||||||||||| Sbjct: 75939 cctcgccgccgaaaccctaacc 75960
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 387 bits (195), Expect = e-104 Identities = 267/291 (91%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 144613 atgtcgaacccgaagggctccaagatgctccagttcgtcaactaccggatgcgcgtgacg 144672 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| ||||| || || || ||||||||||| ||||| ||||||||||||||| Sbjct: 144673 atccaggacgggcgccagctggtcggcaagttcatggcgttcgaccgccacatgaacctc 144732 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 144733 gtcctcggcgactgcgaggagttccgcaagctcccgccctccaagtcctccaagaccacc 144792 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccgtggcgaggaggtcgtc 317 |||||||||||||||||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct: 144793 ggcgagcgcgaggagcggaggacgctgggcctcctgctgctccgcggcgaggaggtcgtc 144852 Query: 318 tccatgaccgtcgagggcccgcccccgcccgatgagtcccgggccaaggcc 368 ||||||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 144853 tccatgaccgtcgagggcccgccaccgcccgacgagtcccgcgccaaggcc 144903 Score = 129 bits (65), Expect = 1e-26 Identities = 125/145 (86%) Strand = Plus / Plus Query: 442 tgctccaggcgcagcccggtctctctggccctgttcggggtgtaggcggtccggctcctg 501 |||||||||| ||||| || ||| | ||||| || || || || ||||| ||||| || | Sbjct: 144977 tgctccaggcccagccagggctcgccggcccggtgcgtggcgtgggcgggccggcccccg 145036 Query: 502 gcatgatgcagccgcagatctcgcgtccccctatgccgaacctctcagcgccgccggtcg 561 ||||||||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 145037 gcatgatgcagccgcagatctcgcgcccgccgatgccgaacctctcggcgccgccggtcg 145096 Query: 562 catacccacaggtcgtccgcccgcc 586 | ||||| |||||||| |||||||| Sbjct: 145097 cgtacccgcaggtcgtgcgcccgcc 145121 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 cctcgccgccgaaaccctaacc 35 |||||||||||||||||||||| Sbjct: 144572 cctcgccgccgaaaccctaacc 144593
>gb|BT018853.1| Zea mays clone EL01N0555H12.d mRNA sequence Length = 1287 Score = 339 bits (171), Expect = 6e-90 Identities = 321/371 (86%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || |||||||||||| |||||||||| ||||| ||||| Sbjct: 126 atgtcgaacccgaagggctccaagatgctccagttcatcaactaccgcatgcgggtgacg 185 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| ||||| |||||||| ||| ||||||| ||||| ||||||||||||||| Sbjct: 186 atccaggacggtcgccagctcgtgggcaaggtcatggcgttcgaccgccacatgaacctc 245 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||||||||||||||||||| ||||||||||| || || |||||| |||| Sbjct: 246 gtcctcggcgactgcgaggagttccgccgcctcccgccctccaagtcctccaaggccacc 305 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccgtggcgaggaggtcgtc 317 ||||| ||||||||||| | ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 306 ggcgaacgcgaggagcgccgcacgctcggcctcctcctgctccgcggcgaggaggtcgtc 365 Query: 318 tccatgaccgtcgagggcccgcccccgcccgatgagtcccgggccaaggcctccgctggc 377 ||||||||||||||||||||||| |||||||| ||||| || ||||||||| | || | Sbjct: 366 tccatgaccgtcgagggcccgccgccgcccgacgagtcgcgcgccaaggccgcggcggcg 425 Query: 378 ggtggcgccctttccggcactggcgttggtcgcgctgccggccgtggggtggccaccggc 437 || || ||||| ||||| ||||||| || ||||| || || || |||||| |||||||| Sbjct: 426 ggcggagccctcgccggccctggcgtgggccgcgccgctgggcgcggggtgcccaccggc 485 Query: 438 ccgctgctcca 448 ||||||||||| Sbjct: 486 ccgctgctcca 496
>gb|AY104657.1| Zea mays PCO103082 mRNA sequence Length = 312 Score = 198 bits (100), Expect = 1e-47 Identities = 193/224 (86%) Strand = Plus / Plus Query: 78 atgtcgaaccccaagggttcgaaaatgctccagttcgtcaactaccggatgcgcgtgacc 137 ||||||||||| ||||| || || |||||||||||| |||||||||| ||||| ||||| Sbjct: 89 atgtcgaacccgaagggctccaagatgctccagttcatcaactaccgcatgcgggtgacg 148 Query: 138 atccaggacggccgccaactcgtggggaagttcatggccttcgatcgccacatgaacctc 197 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 149 atccaggacgggcgccaacttgtgggcaagttcatggcgttcgaccgccacatgaacctc 208 Query: 198 gtcctcggcgactgcgaggagttccgcaagctcccgccctcaaaatcttccaagaccaca 257 ||||||||||| ||||||||||| ||| ||||||||||| | || |||||||| || Sbjct: 209 gtcctcggcgattgcgaggagtttcgccgcctcccgccctccaggtcctccaagactacc 268 Query: 258 ggcgagcgcgaggagcggaggacgctcggcctgctccttctccg 301 || || ||||||||||| | ||||||||||| ||||| ||||| Sbjct: 269 ggtgaacgcgaggagcgccgcacgctcggcctcctcctcctccg 312
>gb|AY089122.1| Arabidopsis thaliana clone 36005 mRNA, complete sequence Length = 1164 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 94 gttcgaaaatgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgcc 153 |||| |||||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | | Sbjct: 154 gttcaaaaatgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagac 213 Query: 154 aactcgtggggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcg 213 | ||||| |||||||||||||| || || || |||||||||||||| |||||||| |||| Sbjct: 214 agctcgttgggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcg 273 Query: 214 aggagttccgcaagct 229 ||||||| || ||||| Sbjct: 274 aggagtttcgtaagct 289 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 520 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 579 Query: 525 cgtcc 529 ||||| Sbjct: 580 cgtcc 584
>ref|NM_179083.2| Arabidopsis thaliana SMB AT4G20440 (SMB) transcript variant AT4G20440.2 mRNA, complete cds Length = 1109 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 157 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 216 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 217 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 276 Query: 222 cgcaagct 229 || ||||| Sbjct: 277 cgtaagct 284 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 517 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 576 Query: 525 cgtcc 529 ||||| Sbjct: 577 cgtcc 581
>ref|NM_118163.3| Arabidopsis thaliana SMB AT4G20440 (SMB) transcript variant AT4G20440.1 mRNA, complete cds Length = 1611 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 161 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 220 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 221 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 280 Query: 222 cgcaagct 229 || ||||| Sbjct: 281 cgtaagct 288 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 521 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 580 Query: 525 cgtcc 529 ||||| Sbjct: 581 cgtcc 585
>ref|NM_001036605.1| Arabidopsis thaliana SMB AT4G20440 (SMB) transcript variant AT4G20440.3 mRNA, complete cds Length = 1476 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 164 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 223 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 224 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 283 Query: 222 cgcaagct 229 || ||||| Sbjct: 284 cgtaagct 291 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 524 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 583 Query: 525 cgtcc 529 ||||| Sbjct: 584 cgtcc 588
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53 Length = 197568 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 27737 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 27678 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 27677 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 27618 Query: 222 cgcaagct 229 || ||||| Sbjct: 27617 cgtaagct 27610 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 27377 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 27318 Query: 525 cgtcc 529 ||||| Sbjct: 27317 cgtcc 27313
>emb|AL080253.2|ATF9F13 Arabidopsis thaliana DNA chromosome 4, BAC clone F9F13 (ESSA project) Length = 109936 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 42190 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 42131 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 42130 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 42071 Query: 222 cgcaagct 229 || ||||| Sbjct: 42070 cgtaagct 42063 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 41830 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 41771 Query: 525 cgtcc 529 ||||| Sbjct: 41770 cgtcc 41766
>emb|BX816797.1|CNS0ABKF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH69ZC10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1295 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 911 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 852 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 851 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 792 Query: 222 cgcaagct 229 || ||||| Sbjct: 791 cgtaagct 784 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 551 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 492 Query: 525 cgtcc 529 ||||| Sbjct: 491 cgtcc 487
>emb|BX827183.1|CNS0A3ND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1174 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 144 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 203 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 204 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 263 Query: 222 cgcaagct 229 || ||||| Sbjct: 264 cgtaagct 271 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 504 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 563 Query: 525 cgtcc 529 ||||| Sbjct: 564 cgtcc 568
>emb|BX829261.1|CNS0A3DY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1107 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 133 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 192 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 193 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 252 Query: 222 cgcaagct 229 || ||||| Sbjct: 253 cgtaagct 260 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctc 523 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 493 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctc 551
>emb|BX828785.1|CNS0A3FA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1147 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 132 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 191 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 192 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 251 Query: 222 cgcaagct 229 || ||||| Sbjct: 252 cgtaagct 259 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 492 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 551 Query: 525 cgtcc 529 ||||| Sbjct: 552 cgtcc 556
>emb|BX828575.1|CNS0A3KN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1111 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 145 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 204 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 205 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 264 Query: 222 cgcaagct 229 || ||||| Sbjct: 265 cgtaagct 272 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 505 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 564 Query: 525 cgtcc 529 ||||| Sbjct: 565 cgtcc 569
>emb|BX841518.1|CNS09YHM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1142 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 133 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 192 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 193 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 252 Query: 222 cgcaagct 229 || ||||| Sbjct: 253 cgtaagct 260 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 493 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 552 Query: 525 cgtcc 529 ||||| Sbjct: 553 cgtcc 557
>gb|BT004219.1| Arabidopsis thaliana clone RAFL15-21-A10 (R20778) putative snRNP protein (At4g20440) mRNA, complete cds Length = 1125 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 157 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 216 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 217 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 276 Query: 222 cgcaagct 229 || ||||| Sbjct: 277 cgtaagct 284 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 517 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 576 Query: 525 cgtcc 529 ||||| Sbjct: 577 cgtcc 581
>emb|BX828989.1|CNS0A3FE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1104 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| || || ||||| ||||| | || ||||| Sbjct: 92 atgcttcagttcatcaactacaggatgcgagttacgatccaagacggaagacagctcgtt 151 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| ||||||||||| Sbjct: 152 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgcgaggagttt 211 Query: 222 cgcaagct 229 || ||||| Sbjct: 212 cgtaagct 219 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 452 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 511 Query: 525 cgtcc 529 ||||| Sbjct: 512 cgtcc 516
>gb|BT005057.1| Arabidopsis thaliana clone U20778 putative snRNP protein (At4g20440) mRNA, complete cds Length = 805 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | || ||||| Sbjct: 25 atgcttcagttcatcaactacaggatgcgagtgacgatccaagacggaagacagctcgtt 84 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||||||||||| |||||||| || |||||||| Sbjct: 85 gggaagttcatggcgtttgaccgtcacatgaacctcgttctcggcgattgtgaggagttt 144 Query: 222 cgcaagct 229 || ||||| Sbjct: 145 cgtaagct 152 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 465 tctggccctgttcggggtgtaggcggtccggctcctggcatgatgcagccgcagatctcg 524 ||||| |||||||| ||||| || || || ||||| || ||||||||||| |||||||| Sbjct: 385 tctggtcctgttcgtggtgttggtggacctgctccgggaatgatgcagcctcagatctct 444 Query: 525 cgtcc 529 ||||| Sbjct: 445 cgtcc 449
>gb|AY106878.1| Zea mays PCO069584 mRNA sequence Length = 718 Score = 95.6 bits (48), Expect = 2e-16 Identities = 159/196 (81%) Strand = Plus / Plus Query: 391 ccggcactggcgttggtcgcgctgccggccgtggggtggccaccggcccgctgctccagg 450 ||||| ||||||| || ||||| || || || || ||| ||||||||||||||||||||| Sbjct: 25 ccggccctggcgtcggccgcgccgctgggcgcggcgtgcccaccggcccgctgctccagg 84 Query: 451 cgcagcccggtctctctggccctgttcggggtgtaggcggtccggctcctggcatgatgc 510 | || ||||| |||||||||| ||||| || || || || || ||||||||||||| Sbjct: 85 cagctcctggtcttgctggccctgtgcggggcgtgggtggacccgcccctggcatgatgc 144 Query: 511 agccgcagatctcgcgtccccctatgccgaacctctcagcgccgccggtcgcatacccac 570 |||| ||||||||||| || || ||||| ||||| || || | |||||| | ||||| | Sbjct: 145 agccccagatctcgcgccctccgatgcccaacctgtcggcccagccggtgtcgtacccgc 204 Query: 571 aggtcgtccgcccgcc 586 ||||||| |||||||| Sbjct: 205 aggtcgtgcgcccgcc 220
>emb|BX828590.1|CNS0A3EN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 102 atgctccagttcgtcaactaccggatgcgcgtgaccatccaggacggccgccaactcgtg 161 ||||| |||| | |||||||| ||||||| ||||| ||||| ||||| | | ||||| Sbjct: 133 atgcttcagtgcatcaactacaggatgcgagtgacgatccaagacggaagagagctcgtt 192 Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttc 221 |||||||||||||| || || || |||||| |||||| |||||||| ||||||| ||| Sbjct: 193 gggaagttcatggcgtttgagcgtgacatgagcctcgttctcggcgattgcgaggggttt 252 Query: 222 cgcaagct 229 || ||||| Sbjct: 253 cgtaagct 260
>emb|BX827918.1|CNS0A3V1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1595 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 162 gggaagttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||||||||| || || || ||||||||||||| |||||||| ||||||||||| Sbjct: 204 gggaagttcatggcgtttgaccgtgacatgaacctcgttctcggcgattgcgaggagtt 262
>gb|DQ217171.1| Taeniopygia guttata clone 0058P0033B10 small nuclear ribonucleoprotein polypeptide B variant 1-like mRNA, complete sequence Length = 980 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 208 cacatgaacctcatcctctgcgactgcgacgagttccgcaag 249
>ref|NM_001036934.1| Arabidopsis thaliana unknown protein AT5G44500 transcript variant AT5G44500.2 mRNA, complete cds Length = 991 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 143 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 195 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 470 gctcctggaatgatgcagcctcagatctc 498
>ref|NM_123817.2| Arabidopsis thaliana unknown protein AT5G44500 transcript variant AT5G44500.1 mRNA, complete cds Length = 1095 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 143 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 195 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 470 gctcctggaatgatgcagcctcagatctc 498
>gb|AY072470.1| Arabidopsis thaliana unknown protein (At5g44500; MFC16.18) mRNA, complete cds Length = 809 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 91 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 143 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 418 gctcctggaatgatgcagcctcagatctc 446
>dbj|AK221574.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-82-D21 Length = 1014 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 155 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 207 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 482 gctcctggaatgatgcagcctcagatctc 510
>gb|AY042856.1| Arabidopsis thaliana Unknown protein (MFC16.13) mRNA, complete cds Length = 1090 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 140 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 192 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 467 gctcctggaatgatgcagcctcagatctc 495
>gb|AY084467.1| Arabidopsis thaliana clone 10879 mRNA, complete sequence Length = 1049 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 144 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 196 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 471 gctcctggaatgatgcagcctcagatctc 499
>dbj|AK176849.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-O12 Length = 1139 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 140 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 192 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 467 gctcctggaatgatgcagcctcagatctc 495
>dbj|AK176073.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-82-D18 Length = 1105 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 143 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 195 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 470 gctcctggaatgatgcagcctcagatctc 498
>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16 Length = 61290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagtt 220 |||||||| ||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 41040 ttcatggcgttcgatcgccacatgaatcttgttcttggcgactgcgaagagtt 41092 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 gctcctggcatgatgcagccgcagatctc 523 |||||||| ||||||||||| |||||||| Sbjct: 41367 gctcctggaatgatgcagcctcagatctc 41395
>ref|NM_204599.1| Gallus gallus small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), mRNA Length = 951 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||| |||||||||| |||||||||||| ||||| |||||||||| |||||||| Sbjct: 170 ttcaaggccttcgataagcacatgaacctcatcctctgcgactgcgacgagttccg 225
>gb|AF134830.1|AF134830 Gallus gallus small nuclear ribonucleoprotein B' (SNRPB') mRNA, complete cds Length = 951 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||| |||||||||| |||||||||||| ||||| |||||||||| |||||||| Sbjct: 170 ttcaaggccttcgataagcacatgaacctcatcctctgcgactgcgacgagttccg 225
>emb|CR385829.1| Gallus gallus finished cDNA, clone ChEST67k15 Length = 924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 168 ttcatggccttcgatcgccacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||| |||||||||| |||||||||||| ||||| |||||||||| |||||||| Sbjct: 150 ttcaaggccttcgataagcacatgaacctcatcctctgcgactgcgacgagttccg 205
>ref|XM_476728.1| Oryza sativa (japonica cultivar-group), mRNA Length = 614 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 549 gcgccgccggtcgcatacccacaggtcgtccgcccgcc 586 |||||||||||||| ||||| |||||||| |||||||| Sbjct: 4 gcgccgccggtcgcgtacccgcaggtcgtgcgcccgcc 41
>gb|AC093102.2| Drosophila melanogaster clone BACR34C10, complete sequence Length = 179428 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 163244 cacatgaacttgatcctcggcgactgcgaggagttccg 163281
>emb|BX070074.1|CNS09Q8E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 825 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 258 cacatgaacctcatcctgggggactgcgaggagttccg 295
>emb|BX053862.1|CNS09DQ2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 890 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 734 cacatgaacctcatcctgggggactgcgaggagttccg 697
>emb|BX053861.1|CNS09DQ1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC31DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 281 cacatgaacctcatcctgggggactgcgaggagttccg 318
>emb|BX052865.1|CNS09CYD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC30AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 835 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 714 cacatgaacctcatcctgggggactgcgaggagttccg 677
>emb|BX052864.1|CNS09CYC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30AH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 840 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 265 cacatgaacctcatcctgggggactgcgaggagttccg 302
>emb|BX038934.1|CNS0927E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 652 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 274 cacatgaacctcatcctgggggactgcgaggagttccg 311
>emb|BX036592.1|CNS090EC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA8CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 870 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 703 cacatgaacctcatcctgggggactgcgaggagttccg 666
>emb|BX036591.1|CNS090EB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA8CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 898 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 253 cacatgaacctcatcctgggggactgcgaggagttccg 290
>emb|BX035332.1|CNS08ZFC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 256 cacatgaacctcatcctgggggactgcgaggagttccg 293
>emb|BX034912.1|CNS08Z3O Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 581 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 259 cacatgaacctcatcctgggggactgcgaggagttccg 296
>emb|BX021223.1|CNS08OJF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31BH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 849 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 219 cacatgaacctcatcctgggggactgcgaggagttccg 256
>ref|NM_057573.3| Drosophila melanogaster Small ribonucleoprotein particle protein B CG5352-RA (SmB), mRNA Length = 940 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 404 cacatgaacttgatcctcggcgactgcgaggagttccg 441
>gb|AY061171.1| Drosophila melanogaster LD14049 full length cDNA Length = 959 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 404 cacatgaacttgatcctcggcgactgcgaggagttccg 441
>ref|XM_315523.2| Anopheles gambiae str. PEST ENSANGP00000007148 (ENSANGG00000005384), partial mRNA Length = 609 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 |||||||||||| |||| || ||||||||||||||||| Sbjct: 109 cacatgaacctcatcctgggggactgcgaggagttccg 146
>dbj|AK109573.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-F03, full insert sequence Length = 614 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 549 gcgccgccggtcgcatacccacaggtcgtccgcccgcc 586 |||||||||||||| ||||| |||||||| |||||||| Sbjct: 4 gcgccgccggtcgcgtacccgcaggtcgtgcgcccgcc 41
>gb|AC007451.1|AC007451 Drosophila melanogaster, chromosome 2L, region 31D1-31F4, BAC clones DS00953 and BACR48K04, complete sequence Length = 161754 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 85866 cacatgaacttgatcctcggcgactgcgaggagttccg 85829
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 188134 cacatgaacttgatcctcggcgactgcgaggagttccg 188097
>gb|L02919.1|DRORNP Drosophila melanogaster ribonucleoprotein mRNA, complete cds Length = 704 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||||||||| Sbjct: 172 cacatgaacttgatcctcggcgactgcgaggagttccg 209
>emb|BX021224.1|CNS08OJG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA31BH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 729 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 187 acatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||||| |||| || ||||||||||||||||| Sbjct: 620 acatgaacctcatcctgggggactgcgaggagttccg 584
>emb|BX070075.1|CNS09Q8F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC6DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 728 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 189 atgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| |||| || ||||||||||||||||| Sbjct: 724 atgaacctcatcctgggggactgcgaggagttccg 690
>gb|DQ440505.1| Aedes aegypti clone AET-9714 U1 snRNP component mRNA, complete cds Length = 618 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||||| |||| || ||||||||||||||||| Sbjct: 109 cacatgaacctaatcctgggggactgcgaggagttccg 146
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 ctggcgttggtcgcgctgccgg 418 |||||||||||||||||||||| Sbjct: 949677 ctggcgttggtcgcgctgccgg 949698
>emb|CR721452.2|CNS0GJMA Tetraodon nigroviridis full-length cDNA Length = 900 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 209 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 250
>emb|CR718639.2|CNS0GHG5 Tetraodon nigroviridis full-length cDNA Length = 875 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 184 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 225
>emb|CR717080.2|CNS0GG8X Tetraodon nigroviridis full-length cDNA Length = 877 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 185 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 226
>emb|CR715177.2|CNS0GES5 Tetraodon nigroviridis full-length cDNA Length = 899 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 207 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 248
>emb|CR715107.2|CNS0GEQ7 Tetraodon nigroviridis full-length cDNA Length = 799 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 210 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 251
>emb|CR714794.2|CNS0GEHI Tetraodon nigroviridis full-length cDNA Length = 867 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 175 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 216
>emb|CR708735.2|CNS0G9T7 Tetraodon nigroviridis full-length cDNA Length = 899 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 208 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 249
>emb|CR705729.2|CNS0G7HP Tetraodon nigroviridis full-length cDNA Length = 878 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 186 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 227
>emb|CR705440.2|CNS0G79O Tetraodon nigroviridis full-length cDNA Length = 829 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 139 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 180
>emb|CR700758.2|CNS0G3NM Tetraodon nigroviridis full-length cDNA Length = 617 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 209 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 250
>emb|CR691841.2|CNS0FWRX Tetraodon nigroviridis full-length cDNA Length = 901 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 209 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 250
>emb|CR682490.2|CNS0FPK6 Tetraodon nigroviridis full-length cDNA Length = 891 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 200 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 241
>emb|CR662498.2|CNS0FA5K Tetraodon nigroviridis full-length cDNA Length = 784 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 187 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 228
>emb|CR647720.2|CNS0EYR2 Tetraodon nigroviridis full-length cDNA Length = 899 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccgcaag 227 |||||||||||| |||| ||||||| || |||||||||||| Sbjct: 208 cacatgaacctcatcctgtgcgactgtgatgagttccgcaag 249
>ref|XM_969236.1| PREDICTED: Tribolium castaneum similar to Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) (LOC663178), mRNA Length = 699 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttccg 223 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 103 cacatgaacatgatcctcggcgactgcgaggaattccg 140
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 397 ctggcgttggtcgcgctgccgg 418 |||||||||||||||||||||| Sbjct: 4075055 ctggcgttggtcgcgctgccgg 4075034
>gb|AE011709.1| Xanthomonas axonopodis pv. citri str. 306, section 87 of 469 of the complete genome Length = 10667 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 ctggcgttggtcgcgctgccgg 418 |||||||||||||||||||||| Sbjct: 123 ctggcgttggtcgcgctgccgg 144
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 397 ctggcgttggtcgcgctgccgg 418 |||||||||||||||||||||| Sbjct: 4078992 ctggcgttggtcgcgctgccgg 4078971
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ctcggcgactgcgaggagttc 221 ||||||||||||||||||||| Sbjct: 2915633 ctcggcgactgcgaggagttc 2915613
>ref|XM_464724.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 152 ccgcttcttcctcgccgccg 133
>ref|XM_783552.1| PREDICTED: Strongylocentrotus purpuratus similar to Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) (LOC583650), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 186 cacatgaacctcgtcctcggcgactgcgaggagttc 221 ||||||||| |||| || || ||||||||||||||| Sbjct: 121 cacatgaacatcgttctgggtgactgcgaggagttc 156
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ccggcactggcgttggtcgc 410 |||||||||||||||||||| Sbjct: 345064 ccggcactggcgttggtcgc 345083
>emb|AJ414559.1|SAE414559 Saccharothrix aerocolonigenes gene cluster for rebeccamycin biosynthesis Length = 25681 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tccgtggcgaggaggtcgtc 317 |||||||||||||||||||| Sbjct: 6690 tccgtggcgaggaggtcgtc 6709
>gb|AF534707.1| Lechevalieria aerocolonigenes putative regulatory protein, putative antibiotic antiporter (rbmK), tryptophan halogenase (rbmJ), putative transporter (rbmI), flavin dependent oxidoreductase (rbmH), putative regulatory protein (rbmG), methyltransferase (rbmF), cytochrome P450 enzyme (rbmE), putative polyketide hydroxylase (rbmD), VioB (rbmC), putative L-tryptophan oxidase (rbmB), putative glycosyltransferase (rbmA), hypothetical protein, putative esterase, and putative dipeptidase genes, complete cds; and unknown gene Length = 28654 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tccgtggcgaggaggtcgtc 317 |||||||||||||||||||| Sbjct: 20721 tccgtggcgaggaggtcgtc 20702
>ref|NM_079108.2| Drosophila melanogaster benign gonial cell neoplasm CG30170-RA (bgcn), mRNA Length = 4021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 3383 cggcgactgcgaggagttcc 3402
>gb|AY089246.1| Drosophila melanogaster AT03323 full insert cDNA Length = 2411 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 1747 cggcgactgcgaggagttcc 1766
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ctccagttcgtcaactaccg 124 |||||||||||||||||||| Sbjct: 650064 ctccagttcgtcaactaccg 650045
>gb|AC009182.4|AC009182 Drosophila melanogaster, chromosome 2R, region 60A2-60A3, BAC clone BACR05F24, complete sequence Length = 147086 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 78675 cggcgactgcgaggagttcc 78656
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 11541883 ccgcttcttcctcgccgccg 11541902
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 7269738 ccgcttcttcctcgccgccg 7269757
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 6441077 ccgcttcttcctcgccgccg 6441096
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 6927764 ccgcttcttcctcgccgccg 6927745
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 14670119 ccgcttcttcctcgccgccg 14670138
>dbj|AB090952.1| Lechevalieria aerocolonigenes rebeccamycin biosynthetic gene cluster, complete cds Length = 26144 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tccgtggcgaggaggtcgtc 317 |||||||||||||||||||| Sbjct: 6810 tccgtggcgaggaggtcgtc 6829
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gaaccccaagggttcgaaaa 102 |||||||||||||||||||| Sbjct: 84079 gaaccccaagggttcgaaaa 84098
>gb|AC120024.22| Homo sapiens chromosome 17, clone CTD-2526A2, complete sequence Length = 136002 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gaaccccaagggttcgaaaa 102 |||||||||||||||||||| Sbjct: 14505 gaaccccaagggttcgaaaa 14524
>gb|AF255662.1|AF255662 Drosophila melanogaster benign gonial cell neoplasm protein mRNA, complete cds Length = 4021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 3383 cggcgactgcgaggagttcc 3402
>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470A03 Length = 133167 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 21386 ccgcttcttcctcgccgccg 21367
>dbj|AP003257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460H02 Length = 155012 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 39219 ccgcttcttcctcgccgccg 39238
>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0062A09 Length = 173541 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 3701 ccgcttcttcctcgccgccg 3720
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 121843 ccgcttcttcctcgccgccg 121862
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 145490 ccgcttcttcctcgccgccg 145471
>dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086M15 Length = 153491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 22552 ccgcttcttcctcgccgccg 22571
>dbj|AP004649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1465_C11 Length = 108091 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 102974 ccgcttcttcctcgccgccg 102993
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 375160 cggcgactgcgaggagttcc 375141
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cttcgatcgccacatgaacctcgt 199 |||||||| ||||||||||||||| Sbjct: 575192 cttcgatctccacatgaacctcgt 575169
>dbj|AB010261.1| Drosophila melanogaster genes at 60A locus in chromosome 2R Length = 33480 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 32633 cggcgactgcgaggagttcc 32652
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 11541554 ccgcttcttcctcgccgccg 11541573
>gb|AC005267.1|AC005267 Drosophila melanogaster DNA sequence (P1s DS03050 (D194) and DS06185 (D246)), complete sequence Length = 98645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cggcgactgcgaggagttcc 222 |||||||||||||||||||| Sbjct: 7359 cggcgactgcgaggagttcc 7340
>emb|CR450261.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0013J10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 16142 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ccgcttcttcctcgccgccg 24 |||||||||||||||||||| Sbjct: 5764 ccgcttcttcctcgccgccg 5783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,973,740 Number of Sequences: 3902068 Number of extensions: 2973740 Number of successful extensions: 70997 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69907 Number of HSP's gapped (non-prelim): 1088 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)