ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart31a09 |
|---|---|
| Clone Library Name | barley_pub |
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 37.7 bits (86), Expect = 0.022 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = +1 Query: 217 HHQPTTGPIREGPRAQRRSPRDSGSATESRSI-----DWFGRWTQHASSIPTPHPPHPRL 381 HHQ P + Q+ SP+ S A+ S SI D FG+ T P P PP R Sbjct: 100 HHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQPPAIRE 159 Query: 382 QIEPGGSLPALLV 420 I PG PA+L+ Sbjct: 160 PISPGPIHPAVLL 172
>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2| Length = 306 Score = 34.7 bits (78), Expect = 0.19 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 1/92 (1%) Frame = +1 Query: 151 AAASPTARV-SYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFGR 327 AA +P+A + P R +P TGP R G ++R + T+ R Sbjct: 207 AARAPSATEGALTRTPAPRRPLQRRRPGTGPWRPG---RQRGAGTAPPGTQPR------- 256 Query: 328 WTQHASSIPTPHPPHPRLQIEPGGSLPALLVV 423 Q S PTP P PRL G P LLV+ Sbjct: 257 --QRPSPRPTPRRPRPRLARPRAGQKPWLLVI 286
>F100A_HUMAN (Q8TB05) Protein FAM100A| Length = 177 Score = 33.9 bits (76), Expect = 0.32 Identities = 27/95 (28%), Positives = 33/95 (34%) Frame = +1 Query: 82 YSSAGVGAXXXXXXXXXXXHLGDAAASPTARVSYPALAVPARRADHHQPTTGPIREGPRA 261 + S G G+ H AA S +A S+P A P HHQP P Sbjct: 91 FHSGGSGSPMAATATSPPPHFPHAATSSSAASSWPTAASPPGGPQHHQPQ-------PPL 143 Query: 262 QRRSPRDSGSATESRSIDWFGRWTQHASSIPTPHP 366 +P S DW Q A+S P HP Sbjct: 144 WTPTPPSPAS-------DWPPLAPQQATSEPRAHP 171
>CIC_HUMAN (Q96RK0) Protein capicua homolog| Length = 1608 Score = 33.1 bits (74), Expect = 0.54 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 2/83 (2%) Frame = +1 Query: 160 SPTARVSYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWF--GRWT 333 +P A P P R+ P P E R + P S S S DW G+ Sbjct: 1228 TPPAPPPLPETWTPTARSS--PPLPPPAEE--RTSAKGPETMASKFPSSSSDWRVPGQGL 1283 Query: 334 QHASSIPTPHPPHPRLQIEPGGS 402 ++ PTP P P + PGGS Sbjct: 1284 ENRGEPPTPPSPAPAPAVAPGGS 1306
>RNPA_THESC (Q7X5K8) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 162 Score = 32.7 bits (73), Expect = 0.71 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = -3 Query: 532 PAPLGDQRLRRGVELVERQSPVAHRGAPHCEDERGKQRPTRRAGIPLALFGD 377 P P D R + GVE + + P+ APH + ER Q P G L+L GD Sbjct: 20 PGPHEDPRRQEGVEAEKAEGPL----APHPQGERLSQPPPAAGGKLLSLKGD 67
>Y3672_STRCO (P40180) Putative glycosyl transferase SCO3672 (EC 2.-.-.-)| Length = 411 Score = 32.3 bits (72), Expect = 0.92 Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = -3 Query: 511 RLRRGVELVERQSPVAHRGAPHCEDERGKQRPTRRAGIPLALFGDGGAAGEVSGWRR-RV 335 RLRR + L + V GA C G T R G AL+ GGAA V G R RV Sbjct: 267 RLRR-LGLTAQGVVVVLGGAALCAVVVGVLAHTGRVGGQAALWVAGGAAAGVLGLLRVRV 325 Query: 334 ESSGRTNRSIGIPSPIR 284 R R G+ +P+R Sbjct: 326 YGPARLRRGAGVRAPVR 342
>GCST_NOCFA (Q5YZ49) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage| system T protein) Length = 366 Score = 32.3 bits (72), Expect = 0.92 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = -3 Query: 556 GKGVVDIDPAPLGDQRLRRGVELVERQ-----SPVAHRGAPHCEDERGKQRPTRRAGIPL 392 GK ++ + A G +R+ G++ ++R PV G P E G PT + GI L Sbjct: 269 GKAALEQEKAA-GPRRILMGLKAIDRGVLRQGQPVLRDGEPVGETTSGTFSPTLKVGIAL 327 Query: 391 ALFGDGGAAGEVSGWRRRVESSGRTNRSIGIPSP 290 AL G AG G V+ GR R + P Sbjct: 328 ALLDTG--AGLEPGAEVAVDVRGRRLRCEVVKPP 359
>CREA_ASPNG (Q05620) DNA-binding protein creA (Carbon catabolite repressor)| Length = 427 Score = 32.3 bits (72), Expect = 0.92 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +2 Query: 257 EHNAAARGTPDRRRNPDRSIGSAAGLNTPPPSRHLTRRTPVSK*SQGDPCPP 412 +H AAA D ++ + A PPPS+ +TR PVS+ D PP Sbjct: 140 QHLAAAAAAA---AGQDNAMANTASAMMPPPSKPMTRSAPVSQVGSPDISPP 188
>CREA_ASPAC (O94166) DNA-binding protein creA (Carbon catabolite repressor)| Length = 431 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 257 EHNAAARGTPDRRRNPDRSIGSAAGLNTPPPSRHLTRRTPVSK*SQGDPCPP 412 +H AAA + N ++ + AG PPPS+ +TR PVS+ D PP Sbjct: 143 QHLAAAAAAAAGQEN---AMPNNAGALMPPPSKPMTRSAPVSQVGSPDISPP 191
>CREA_EMENI (Q01981) DNA-binding protein creA (Carbon catabolite repressor)| Length = 416 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 257 EHNAAARGTPDRRRNPDRSIGSAAGLNTPPPSRHLTRRTPVSK*SQGDPCPP 412 +H AAA ++ ++ + AG PPPS+ +TR PVS+ D PP Sbjct: 128 QHLAAAAAAAAANQDGS-AMANNAGSMMPPPSKPITRSAPVSQVGSPDISPP 178
>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)| (Ubiquitin thioesterase 42) (Ubiquitin-specific-processing protease 42) (Deubiquitinating enzyme 42) Length = 1325 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 220 HQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFG---RWTQHASSIPTPHPPHPRLQIE 390 H TGP+++ P + SP + S + ++ W+ + SS+ HP ++ I Sbjct: 466 HLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVNRSSVIPEHPKKQKITIS 525 Query: 391 PGGSLP 408 LP Sbjct: 526 IHNKLP 531
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 31.2 bits (69), Expect = 2.1 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 15/97 (15%) Frame = +1 Query: 148 DAAASPTARVSYPALAVPARRADHHQP---------------TTGPIREGPRAQRRSPRD 282 DA+ +P + PAL VP+ RA +P + E PR QR S D Sbjct: 102 DASEAPAGK---PALQVPSSRAAAPRPPGSAASGRPHDDTDSNRASLPELPRMQRPSLPD 158 Query: 283 SGSATESRSIDWFGRWTQHASSIPTPHPPHPRLQIEP 393 SR G +H+SS P P PP R P Sbjct: 159 L-----SRPNTASGTGMKHSSSAPPPPPPGRRANAPP 190
>OM1B_CHLTR (P23421) Major outer membrane protein, serovar B precursor (MOMP)| Length = 394 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = +2 Query: 395 GDPCPPCWSLLTALVFAMG--GSSVCDGTLSLD---EFNASAKALVTKWSGI 535 GDPC PC + + A+ MG G V D L D EF AK T + + Sbjct: 45 GDPCDPCTTWVDAISMRMGYYGDFVFDRVLKTDVNKEFQMGAKPTTTTGNAV 96
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/71 (28%), Positives = 31/71 (43%) Frame = +1 Query: 157 ASPTARVSYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFGRWTQ 336 A+P A+VS PA + + + G + G + P GS + RS+ FG T Sbjct: 735 AAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTD 794 Query: 337 HASSIPTPHPP 369 ++S PP Sbjct: 795 SSASTSCSPPP 805
>ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Eps8 SH3| domain-binding protein) (Eps8-binding protein) (e3B1) Length = 475 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Frame = +1 Query: 73 THLYSSAGVGAXXXXXXXXXXXHLGDAAASP-TARVSYPALA------VPARRADHHQPT 231 TH SS G G+ + SP TA + P A R+ H T Sbjct: 232 THSGSSGGSGSRENSGSSSIGIPIAVPTPSPPTAGPAAPGAAPGSQYGTMTRQISRHNST 291 Query: 232 TGPIREGPRAQRRSPRDSGSATESRSIDWFGRWTQHASSIPTPHPPHPRL 381 T G RR+P + + ++ ++Q++ SI P PP P+L Sbjct: 292 TSSTSSG--GYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQL 339
>ALR1_AGRT5 (P58736) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 391 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -3 Query: 490 LVERQSPVAHRGAPHCEDERGKQRPTRRAGIPLALFGDGGAAGEVSGWRRRVESSGRTNR 311 L++R S +A + + G QR +GIPL G GGA G V+G +V +GR Sbjct: 276 LLKRASRLAIASVGYAD---GYQRSLSGSGIPLREMGHGGAYGVVNG--HKVPVAGRVTM 330 Query: 310 SIGI 299 + I Sbjct: 331 DLTI 334
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/78 (30%), Positives = 26/78 (33%) Frame = +1 Query: 163 PTARVSYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFGRWTQHA 342 P P L P RRA P R RRS D G + W+ A Sbjct: 27 PLGTAGQPRLGPPPRRARRFSGKAEPRPRSSRLSRRSSVDLGLLSS---------WSLPA 77 Query: 343 SSIPTPHPPHPRLQIEPG 396 S P P PP P PG Sbjct: 78 S--PAPDPPDPPDSAGPG 93
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 30.4 bits (67), Expect = 3.5 Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 8/86 (9%) Frame = +1 Query: 175 VSYPALAVPARRADHHQPTTGPIREGPRAQRRS--------PRDSGSATESRSIDWFGRW 330 V PA + P A QP T RA R S P +G R R Sbjct: 1350 VKTPAASEPLPSASTDQPITPKPTSRGRAHRSSAKTPELQPPTSTGQPVTPRPTSQATRG 1409 Query: 331 TQHASSIPTPHPPHPRLQIEPGGSLP 408 H SSI TP P P EP S P Sbjct: 1410 RTHRSSIKTPEPVVP-TDPEPQPSTP 1434
>ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Ablphilin-1) Length = 480 Score = 30.4 bits (67), Expect = 3.5 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 7/110 (6%) Frame = +1 Query: 73 THLYSSAGVGAXXXXXXXXXXXHLGDAAASP-TARVSYPALA------VPARRADHHQPT 231 TH SS G G+ + SP TA + P A R+ H T Sbjct: 237 THSGSSGGSGSRENSGSSSIGIPIAVPTPSPPTAGPAAPGAAPGSQYGTMTRQISRHNST 296 Query: 232 TGPIREGPRAQRRSPRDSGSATESRSIDWFGRWTQHASSIPTPHPPHPRL 381 T G RR+P + + ++ ++Q++ S+ P PP P+L Sbjct: 297 TSSTSSG--GYRRTPSVAAQFSAQPHVNGGPLYSQNSISVAPPPPPMPQL 344
>ZN395_HUMAN (Q9H8N7) Zinc finger protein 395 (Papillomavirus-binding factor)| (Papillomavirus regulatory factor 1) (PRF-1) (Huntington disease gene regulatory region-binding protein 2) (HDBP-2) (HD gene regulatory region-binding protein 2) (HD-regulating Length = 513 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 Query: 277 RDSGSATESRSIDWFGRWTQHASSIPTPHPPHPR 378 ++SG ++S S G W+ +S + TP PPHP+ Sbjct: 204 KESGDISDSGSSTTSGHWSG-SSGVSTPSPPHPQ 236
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 1/81 (1%) Frame = +1 Query: 154 AASPTARVSYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFGRWT 333 A TAR A ARRA P P REGP + P+ A + W Sbjct: 844 ALRQTARPRESARDPDARRAWPSSPERAPGREGPYGRESEPQQREHAPPREHVPWDADPE 903 Query: 334 Q-HASSIPTPHPPHPRLQIEP 393 + A P H P + EP Sbjct: 904 RAKAGDAPRRHTHRPVAEGEP 924
>OM1L_CHLTR (P19542) Major outer membrane protein, serovar L1 precursor (MOMP)| Length = 393 Score = 30.0 bits (66), Expect = 4.6 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = +2 Query: 395 GDPCPPCWSLLTALVFAMG--GSSVCDGTLSLD---EFNASAKALVT 520 GDPC PC + A+ MG G V D L D EF AK T Sbjct: 45 GDPCDPCTTWCDAISMRMGYYGDFVFDRVLQTDVNKEFQMGAKPTAT 91
>APD14_APIME (Q06601) Apidaecins type 14 precursor [Contains: Apidaecin-2| (Apidaecin II); Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 168 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%) Frame = +1 Query: 349 IPTPHPPHPRL----QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 132 IPQPRPPHPRLRREPEAEPGNNRPVYI 158 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%) Frame = +1 Query: 349 IPTPHPPHPRL----QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 106 IPQPRPPHPRLRREPEAEPGNNRPVYI 132 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 78 IPQPRPPHPRLRREAESEAEPGNNRPVYI 106
>HEP_DROME (Q23977) Dual specificity mitogen-activated protein kinase kinase| hemipterous (EC 2.7.12.2) (MAPKK) Length = 1178 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Frame = -1 Query: 552 RALSTSIPLHLVTNAFAEALNS-SRDRVPSHTEEPPIAKTSAVSNDQQGGQGSPWLYLET 376 R +T + L + A + +S RD+ P H + P A S V+N G G Y T Sbjct: 984 RQFATYVKTQLNSTATSPVASSMDRDQEPVHPQPP--AYRSVVNN----GSGGKSYYYRT 1037 Query: 375 XXXXXXXXXXXXVLSPAAEPIDRSG 301 SP EP+ G Sbjct: 1038 LSAASSSSNTSQSTSPTTEPLPGGG 1062
>PP2B2_DROME (Q27889) Serine/threonine-protein phosphatase 2B catalytic subunit| 2, (EC 3.1.3.16) (Calmodulin-dependent calcineurin A2 subunit) Length = 570 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = -1 Query: 531 PLHLVTNAFAEA--LNSSRDRVPSHTEEPPIAKTSAVSNDQQGGQ 403 P H +T+ FAEA L++ +R+P ++PP + QQGG+ Sbjct: 521 PNHKITS-FAEAKGLDAVNERMPPRRDQPPTPSEDPNQHSQQGGK 564
>CAPP_TOBAC (P27154) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 964 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = +1 Query: 175 VSYPALAVPARRADHHQPTTGPIREGPRAQRRSPRDSGSATESRSIDWFGRWTQHASSIP 354 V Y ALA P + G + G R +R P SG R+I W WTQ +P Sbjct: 733 VEYSALATP-------ELEYGRMNIGSRPSKRKP--SGGIESLRAIPWIFAWTQTRFHLP 783
>DCR1A_MOUSE (Q9JIC3) DNA cross-link repair 1A protein| Length = 1026 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/75 (26%), Positives = 30/75 (40%) Frame = +2 Query: 257 EHNAAARGTPDRRRNPDRSIGSAAGLNTPPPSRHLTRRTPVSK*SQGDPCPPCWSLLTAL 436 E + T + R+ D S+ L T PS + R+ S SQ P P C + Sbjct: 210 ERRSMTLKTENLRKVSDHSLLMMQYLETSQPSAEINRKNVSSPCSQTSPVPQCAEFVKRD 269 Query: 437 VFAMGGSSVCDGTLS 481 GGS + + L+ Sbjct: 270 QLVGGGSPLAEVALN 284
>SL9A3_RABIT (P26432) Sodium/hydrogen exchanger 3 (Na(+)/H(+) exchanger 3)| (NHE-3) (Solute carrier family 9 member 3) Length = 832 Score = 29.6 bits (65), Expect = 6.0 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +2 Query: 404 CPPCWSLLTALVFAMG 451 C PCW LL ALV A+G Sbjct: 7 CGPCWGLLLALVLALG 22
>OM1A_CHLTR (P23732) Major outer membrane protein, serovar A precursor (MOMP)| Length = 396 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = +2 Query: 395 GDPCPPCWSLLTALVFAMG--GSSVCDGTLSLD---EFNASAKALVTKWSGIDVD 544 GDPC PC + A+ MG G V D L D EF A +G++ D Sbjct: 45 GDPCDPCTTWCDAISMRMGYYGDFVFDRVLKTDVNKEFQMGAAPTTRDVAGLEKD 99
>APD73_APIME (Q06602) Apidaecins type 73 precursor [Contains: Apidaecin;| Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] (Fragment) Length = 283 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 217 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 245 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 189 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 217 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPR------LQIEPGGSLPALL 417 IP P PPHPR L+ EPG + P + Sbjct: 133 IPQPRPPHPRLRREAELEAEPGNNRPVYI 161 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPR------LQIEPGGSLPALL 417 IP P PPHPR L+ EPG + P + Sbjct: 77 IPQPRPPHPRLRREAELEAEPGNNRPVYI 105 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 49 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 77
>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)| Length = 429 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 326 AGLNTPPPSRHLTRRTPVSK*SQGDPCPP 412 AG PPP++ +TR PVS+ D PP Sbjct: 162 AGSLMPPPTKPMTRSAPVSQVGSPDVSPP 190
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +1 Query: 232 TGPIREGPRAQRRSPRDSGSATES--RSIDWFGRWTQHASSIPTPHPPHPRLQI-EPGG 399 TGP R P Q + D ++ R W HA+ + TP PP RL+ +PGG Sbjct: 344 TGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGG 402
>HPAB3_PSEYM (Q8RP04) Effector protein hopAB3 (Avirulence protein hopPmaL) (Type| III effector hopPmaL) Length = 385 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +1 Query: 187 ALAVPARRADHHQPTTGPIREGPRAQRRSPRDS---GSATESRS 309 AL RRAD Q P R PR+ R+P S +ATES S Sbjct: 207 ALREALRRADSQQAARAPARTPPRSSVRTPERSPAPRTATESSS 250
>APD22_APIME (P35581) Apidaecins type 22 precursor [Contains: Apidaecin-1B| (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 144 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 106 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 134 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 78 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 106 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 6/29 (20%) Frame = +1 Query: 349 IPTPHPPHPRL------QIEPGGSLPALL 417 IP P PPHPRL + EPG + P + Sbjct: 50 IPQPRPPHPRLRREAEPEAEPGNNRPVYI 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,322,183 Number of Sequences: 219361 Number of extensions: 1537569 Number of successful extensions: 5977 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5495 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5964 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
