Clone Information

BLAST Search Result

Clone Name	bart31a08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band...	38	0.020
2	LMNA_RAT (P48679) Lamin-A	35	0.22
3	LMNA_MOUSE (P48678) Lamin-A/C	35	0.22
4	LMNA_HUMAN (P02545) Lamin-A/C (70 kDa lamin) (NY-REN-32 antigen)	35	0.22
5	DYNA_NEUCR (Q01397) Dynactin, 150 kDa isoform (150 kDa dynein-as...	34	0.37
6	LMNA_PIG (Q3ZD69) Lamin-A/C	33	0.48
7	YLX8_CAEEL (P46504) Hypothetical protein F23F12.8 precursor	33	0.82
8	EEA1_MOUSE (Q8BL66) Early endosome antigen 1	32	1.4
9	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	32	1.4
10	PROQ_SALTY (P60317) ProP effector	32	1.4
11	PROQ_SALTI (P60318) ProP effector	32	1.4
12	IF2_ANASP (Q8YQJ1) Translation initiation factor IF-2	32	1.8
13	HES3_MOUSE (Q61657) Transcription factor HES-3 (Hairy and enhanc...	31	2.4
14	CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protei...	31	2.4
15	CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protei...	31	2.4
16	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	31	3.1
17	CMC2_MOUSE (Q9QXX4) Calcium-binding mitochondrial carrier protei...	31	3.1
18	IWS1_CAEEL (Q19375) IWS1-like protein	31	3.1
19	CMC2_HUMAN (Q9UJS0) Calcium-binding mitochondrial carrier protei...	31	3.1
20	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	31	3.1
21	FTSK_CAUCR (Q9A262) DNA translocase ftsK	31	3.1
22	HDA2_ASHGO (Q75EZ7) HDA1 complex subunit 2 (Histone deacetylase ...	30	4.1
23	SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 ...	30	4.1
24	IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 s...	28	4.3
25	ATK2_ARATH (P46864) Kinesin-2 (Kinesin-like protein B)	30	5.3
26	ANM8_HUMAN (Q9NR22) Protein arginine N-methyltransferase 8 (EC 2...	30	5.3
27	PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate pho...	30	5.3
28	CHS4_MAGGR (O13353) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP ...	30	5.3
29	GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)	30	5.3
30	CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protei...	30	5.3
31	YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A...	30	6.9
32	GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing prote...	30	6.9
33	ANM8_MOUSE (Q6PAK3) Protein arginine N-methyltransferase 8 (EC 2...	30	6.9
34	LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (P...	30	6.9
35	GAT5B_XENLA (P43696) GATA-binding factor 5-B (Transcription fact...	30	6.9
36	LMNA_CHICK (P13648) Lamin-A	30	6.9
37	PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi...	29	9.1
38	LVA_DROME (Q8MSS1) Protein lava lamp	29	9.1
39	CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)	29	9.1
40	NAF1_HUMAN (Q15025) Nef-associated factor 1 (Naf1) (TNFAIP3-inte...	29	9.1
41	LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7...	29	9.1
42	HIS6_DEIRA (Q9RWD7) Imidazole glycerol phosphate synthase subuni...	29	9.1
43	ACK1_MOUSE (O54967) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-...	29	9.1
44	LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 ...	29	9.1
45	GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3...	29	9.1

>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
 Frame = -3

Query: 349 PISVHICSSSRSRE-PHGVSKLTLHRAGLSSPYPAMAVSPISSLQKKEEAAVEADG-ETP 176
           P+S H+   +R R+ P G  +    R G S   P  A   I   ++ EE A EA+G   P
Sbjct: 84  PLSTHLPPDARRRKTPQGPGRKPRRRPGAS---PTGATPTIEEGEEDEEEANEAEGARAP 140

Query: 175 AAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQPFSPFSLLAARQTAPL 5
             PS  +  P ++       +G  +K+   +  PP +  HQ  +P++   A+   P+
Sbjct: 141 TEPSPAST-PSSVQFFLQEDEGAERKAERTSPSPPTLLPHQEAAPWATEGAQTGVPV 196

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>LMNA_RAT (P48679) Lamin-A|
          Length = 665

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = +3

Query: 318 RELEQIWT-EIGEREQDKDRMFQELEA--ECMHVYRRKVDSANADRSQLRQSVMAKEAEL 488
           +ELE+ ++ ++    Q  +R    + A  E +   R ++DS +A  SQL++ + AKEA+L
Sbjct: 261 KELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKL 320

Query: 489 KALVASIG--ENTTQFKVNEKHASLKEQLAAVTPLLDD 596
           + L  S+    +T++  + EK   + E  A +   LD+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDE 358

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>LMNA_MOUSE (P48678) Lamin-A/C|
          Length = 665

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = +3

Query: 318 RELEQIWT-EIGEREQDKDRMFQELEA--ECMHVYRRKVDSANADRSQLRQSVMAKEAEL 488
           +ELE+ ++ ++    Q  +R    + A  E +   R ++DS +A  SQL++ + AKEA+L
Sbjct: 261 KELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKL 320

Query: 489 KALVASIG--ENTTQFKVNEKHASLKEQLAAVTPLLDD 596
           + L  S+    +T++  + EK   + E  A +   LD+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDE 358

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>LMNA_HUMAN (P02545) Lamin-A/C (70 kDa lamin) (NY-REN-32 antigen)|
          Length = 664

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = +3

Query: 318 RELEQIWT-EIGEREQDKDRMFQELEA--ECMHVYRRKVDSANADRSQLRQSVMAKEAEL 488
           +ELE+ ++ ++    Q  +R    + A  E +   R ++DS +A  SQL++ + AKEA+L
Sbjct: 261 KELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKL 320

Query: 489 KALVASIG--ENTTQFKVNEKHASLKEQLAAVTPLLDD 596
           + L  S+    +T++  + EK   + E  A +   LD+
Sbjct: 321 RDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDE 358

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>DYNA_NEUCR (Q01397) Dynactin, 150 kDa isoform (150 kDa dynein-associated|
           polypeptide) (DP-150) (DAP-150) (p150-glued)
          Length = 1300

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +3

Query: 450 QLRQSVMAKEAELKALVASIGENTTQFK-VNEKHASLKEQLAAVTPLLDDL 599
           +LR     +E ELK  + S+ E+  +F+ + E+H + KE+LA    +++DL
Sbjct: 419 RLRDITQQQEEELKDQIKSMEEDLREFETIKEQHTTAKEKLAQTEAIVEDL 469

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>LMNA_PIG (Q3ZD69) Lamin-A/C|
          Length = 664

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = +3

Query: 318 RELEQIWT-EIGEREQDKDRMFQELEA--ECMHVYRRKVDSANADRSQLRQSVMAKEAEL 488
           +ELE+ ++ ++    Q  +R    + A  E +   R ++DS +A  SQL++ + AKEA+L
Sbjct: 261 KELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKL 320

Query: 489 KALVASIG--ENTTQFKVNEKHASLKEQLAAVTPLLDD 596
           + L  S+    +T++  + +K   + E  A +   LD+
Sbjct: 321 RDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDE 358

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>YLX8_CAEEL (P46504) Hypothetical protein F23F12.8 precursor|
          Length = 980

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
 Frame = +3

Query: 309 SLLRELEQIWTEIGEREQDKDRMFQELEAECMHVYR-----RKVDSANADRSQLRQSVMA 473
           S +RELE++  E   R++  +R+ QELEA   +  +     RK+     +  Q+RQ   A
Sbjct: 399 SKIRELERLQLE---RQRKNERVRQELEAARKYKLQEEERQRKIQQQKVEMEQIRQQEEA 455

Query: 474 KEAELKAL 497
           ++ +L+ L
Sbjct: 456 RQEQLRVL 463

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>EEA1_MOUSE (Q8BL66) Early endosome antigen 1|
          Length = 1411

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = +3

Query: 321 ELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRSQLRQSVMAKEAELKALV 500
           +LEQ+  +IG    DKD+  Q LEA  +   +  V     +R  L   + A E       
Sbjct: 510 DLEQVLRQIG----DKDQKIQNLEA-LLQKGKESVSLLEKEREDLYAKIQAGE------- 557

Query: 501 ASIGENTTQFKVNEKHASLKEQLAAVTPLL 590
              GE     ++ EK+ +L++QL  +T  L
Sbjct: 558 ---GETAVLNQLQEKNHALQQQLTQLTEKL 584

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>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein|
           p162) (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/90 (27%), Positives = 41/90 (45%)
 Frame = +3

Query: 321 ELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRSQLRQSVMAKEAELKALV 500
           +LEQ+  +IG    DKD+  Q LEA  +   +  +     +R  L   + A E       
Sbjct: 510 DLEQVLRQIG----DKDQKIQNLEA-LLQKSKENISLLEKEREDLYAKIQAGE------- 557

Query: 501 ASIGENTTQFKVNEKHASLKEQLAAVTPLL 590
              GE     ++ EK+ +L+EQ+  +T  L
Sbjct: 558 ---GETAVLNQLQEKNHTLQEQVTQLTEKL 584

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>PROQ_SALTY (P60317) ProP effector|
          Length = 228

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/68 (32%), Positives = 27/68 (39%)
 Frame = -3

Query: 217 KKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQPFSPF 38
           KK EAA  A  +  A   +   RP+A        K R  K    A R P    H P S  
Sbjct: 120 KKREAAAAAGEKEDAPRRERKPRPVARRKEGAERKPRADKPTTKAPRAPREEKHTPVSDI 179

Query: 37  SLLAARQT 14
           S+L   Q+
Sbjct: 180 SVLTVGQS 187

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>PROQ_SALTI (P60318) ProP effector|
          Length = 228

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/68 (32%), Positives = 27/68 (39%)
 Frame = -3

Query: 217 KKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQPFSPF 38
           KK EAA  A  +  A   +   RP+A        K R  K    A R P    H P S  
Sbjct: 120 KKREAAAAAGEKEDAPRRERKPRPVARRKEGAERKPRADKPTTKAPRAPREEKHTPVSDI 179

Query: 37  SLLAARQT 14
           S+L   Q+
Sbjct: 180 SVLTVGQS 187

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>IF2_ANASP (Q8YQJ1) Translation initiation factor IF-2|
          Length = 1039

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/73 (32%), Positives = 29/73 (39%)
 Frame = -3

Query: 220 QKKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQPFSP 41
           Q K   A  A GET +AP     RP        L K   + + P A    GIR  +P  P
Sbjct: 241 QAKPRVAKPAQGETSSAPVQKQARP-----AQGLVKPEQRVNRPGAPSGDGIRPQRPVRP 295

Query: 40  FSLLAARQTAPLG 2
            +  A   T P G
Sbjct: 296 SADAAPVATPPRG 308

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>HES3_MOUSE (Q61657) Transcription factor HES-3 (Hairy and enhancer of split 3)|
          Length = 175

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 105 PRSPIPMPGGLLVSATTNPSPPSLSS 28
           P+SP+P+PGGLL S+T   +P   S+
Sbjct: 134 PQSPLPLPGGLLESSTDVVAPQPASN 159

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>CMC1_PONPY (Q5RBC8) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 678

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 PISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMA-VSPISSLQKKEEAAVEADGETPA 173
           P+  H C    + E   V  L L  AG  +  PA + V+P   ++ + + A  A   T +
Sbjct: 500 PVYAH-CKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTTYS 558

Query: 172 APSDCTRRPLALLGPAVLAKG---RTKKSNP 89
              DC R+ L   GP+   KG   R  +S+P
Sbjct: 559 GVIDCFRKILREEGPSAFWKGTAARVFRSSP 589

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>CMC1_HUMAN (O75746) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 678

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 PISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMA-VSPISSLQKKEEAAVEADGETPA 173
           P+  H C    + E   V  L L  AG  +  PA + V+P   ++ + + A  A   T +
Sbjct: 500 PVYAH-CKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTTYS 558

Query: 172 APSDCTRRPLALLGPAVLAKG---RTKKSNP 89
              DC R+ L   GP+   KG   R  +S+P
Sbjct: 559 GVIDCFRKILREEGPSAFWKGTAARVFRSSP 589

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>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -3

Query: 283 LHRAGLSSPYPAMAVSPISSLQKKEEAAVEADGETPAAPSDCTRRPLALLGPAV 122
           L RA   +P PA A +PIS++       ++     PA P+D    P A LGPA+
Sbjct: 469 LDRAPTPAPAPAPAPAPISTM-------IDLTANAPARPAD--PAPAAALGPAL 513

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>CMC2_MOUSE (Q9QXX4) Calcium-binding mitochondrial carrier protein Aralar2|
           (Mitochondrial aspartate glutamate carrier 2) (Solute
           carrier family 25 member 13) (Citrin)
          Length = 676

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 PISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMA-VSPISSLQKKEEAAVEADGETPA 173
           P   H+  +S + E   VS  +L  AG  +  PA + V+P   ++ + + A  A   T  
Sbjct: 503 PCYAHV-KASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYN 561

Query: 172 APSDCTRRPLALLGPAVLAKG---RTKKSNP 89
             +DC R+ L   GP  L KG   R  +S+P
Sbjct: 562 GVTDCFRKILREEGPKALWKGVAARVFRSSP 592

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>IWS1_CAEEL (Q19375) IWS1-like protein|
          Length = 511

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
 Frame = -3

Query: 325 SSRSREPHGVSKLTLHRAGLSSPYPAMAVSPISSLQKKEEAAVEADGETPAAPSDCTR-- 152
           S    E HG S  +   +G SSP     ++PIS           ++G  P +PS   +  
Sbjct: 2   SDHEEESHGASPTSPASSGASSP-----LAPISP---------RSEGNAPESPSGDVQDI 47

Query: 151 -RPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQP 50
            +  +   PA  A+  +  ++P+A  P G R+  P
Sbjct: 48  YKDESFEAPASPARDSSAPASPSAASPAGSRSPSP 82

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>CMC2_HUMAN (Q9UJS0) Calcium-binding mitochondrial carrier protein Aralar2|
           (Mitochondrial aspartate glutamate carrier 2) (Solute
           carrier family 25 member 13) (Citrin)
          Length = 675

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 PISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMA-VSPISSLQKKEEAAVEADGETPA 173
           P   H+  +S + E   VS  +L  AG  +  PA + V+P   ++ + + A  A   T +
Sbjct: 502 PCYAHV-KASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYS 560

Query: 172 APSDCTRRPLALLGPAVLAKG---RTKKSNP 89
              DC R+ L   GP  L KG   R  +S+P
Sbjct: 561 GVIDCFRKILREEGPKALWKGAGARVFRSSP 591

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>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = -3

Query: 232 ISSLQKKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPG-IRNH 56
           I+SLQ  +     A+GE  + P    RRPL   GP      +     P++ RP   +R H
Sbjct: 80  ITSLQAAQHELPAAEGEVWSLPVPVERRPLP--GPRKRQSSQHSDPKPHSNRPSTVVRAH 137

Query: 55  QPFSPFSL 32
           +P SP +L
Sbjct: 138 RP-SPQNL 144

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>FTSK_CAUCR (Q9A262) DNA translocase ftsK|
          Length = 819

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 259 PYPAMAVSPISSLQKKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRT 104
           P PA A  P+ + ++K E A    G  P   +D    P+A   PA   +  T
Sbjct: 218 PEPAPAAKPVRARREKAEPAAPRAGRLPPLEADEDETPIAASQPAAAQRAYT 269

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>HDA2_ASHGO (Q75EZ7) HDA1 complex subunit 2 (Histone deacetylase complex 1|
           subunit 2)
          Length = 665

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 23/100 (23%)
 Frame = +3

Query: 351 EREQDKDRMFQELEAECMHVYRRK---------------VDSANADRSQLRQSVMAKEAE 485
           ER +D+    +E  A   H+ RRK               V S  A  ++LRQ +M  E +
Sbjct: 488 ERTRDEHDRLREKSA---HLRRRKAELEELLASSDLDSRVSSKRARLAELRQQLMPLEQQ 544

Query: 486 LKALVASIGENTTQFKVNEKH--------ASLKEQLAAVT 581
             A+  S  E  T+++    H        ASL+E+ AA+T
Sbjct: 545 NTAMADSNEELRTRYQTRSSHAATLSSALASLRERKAALT 584

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>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit 4)|
            (snRNA-activating protein complex 190 kDa subunit) (SNAPc
            190 kDa subunit) (Proximal sequence element-binding
            transcription factor alpha subunit) (PSE-binding factor
            alpha
          Length = 1469

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 114  KEGPRSPIPMPGGLLVSATTNPSPPSLSSRHGRRHP 7
            +E  R P+ +P  LLVS++    PP   + HGR  P
Sbjct: 908  REATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAP 943

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>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 28.1 bits (61), Expect(2) = 4.3
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
 Frame = -3

Query: 274 AGLSSPYPAMAVSPI-------SSLQKKEEAAVEADGETPAAPSDCTRRPL-ALLGPAV 122
           A + +P PA A +P+       SS      AA  A G+TPA+     + P  AL GPA+
Sbjct: 24  ASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPAL 82



 Score = 20.8 bits (42), Expect(2) = 4.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 108 GPRSPIPMPGGLLV 67
           GP  P P PGG +V
Sbjct: 79  GPALPGPFPGGRVV 92

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>ATK2_ARATH (P46864) Kinesin-2 (Kinesin-like protein B)|
          Length = 745

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
 Frame = +3

Query: 225 EEMGETAMAGYGLDRPARCSVSFDTPCGSLLRELEQIWTEIGEREQ------DKDRMFQE 386
           +E  E   A   L +     ++ ++   ++  EL +   E+    Q      D  ++ QE
Sbjct: 135 KEQTEKLAANESLGKEREARIAVESLQAAITEELAKTQGELQTANQRIQAVNDMYKLLQE 194

Query: 387 LEAECMHVYRRKVDSANADRSQLRQSVMAKEAELKALVASIGENTTQFKVNEKHASLKEQ 566
             +  + +Y  K+     D  +  +++   E E   +V SIG    QFK      +L++Q
Sbjct: 195 YNSS-LQLYNSKLQG---DLDEAHENIKRGEKERTGIVESIGNLKGQFK------ALQDQ 244

Query: 567 LAAVTPLLDDL 599
           LAA     DD+
Sbjct: 245 LAASKVSQDDV 255

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>ANM8_HUMAN (Q9NR22) Protein arginine N-methyltransferase 8 (EC 2.1.1.-)|
           (Heterogeneous nuclear ribonucleoprotein
           methyltransferase-like protein 4)
          Length = 394

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
 Frame = -2

Query: 341 CPYLLELAQQGAARRVEADAAPRRPVQPV------------------PGHGRLAHLLSPE 216
           C  L     + AA   E ++ P +P QPV                  PG G+++ LL+PE
Sbjct: 9   CLLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPE 68

Query: 215 E 213
           E
Sbjct: 69  E 69

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>PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154)
          Length = 1216

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 213 FFWREEMGETAMAGYGLDRPARCSVSFDTPCGSLLRELEQIWTEIGEREQ 362
           F+W ++  ET +    L + ARC    + P    LREL  +   IG  EQ
Sbjct: 52  FYWTDQNKETELLDLSLVKDARCGKHAEAPKDPKLRELLDV-GNIGHLEQ 100

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>CHS4_MAGGR (O13353) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 4) (Class-IV chitin
           synthase 4)
          Length = 1198

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 184 ETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRN 59
           ET A  SD TRR ++     ++ +G+ K+  P   RPP   N
Sbjct: 167 ETVAEKSDNTRRRVSTRNSKIVKEGKRKEKIPEQLRPPSAWN 208

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>GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)|
          Length = 2238

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 28/109 (25%), Positives = 44/109 (40%)
 Frame = +3

Query: 261  LDRPARCSVSFDTPCGSLLRELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANA 440
            LD+      S  +     LR  +Q+  E+     D D+M Q LEAE     R       +
Sbjct: 699  LDKKQMELESVSSELSEALRARDQLAEELSVLRGDADKMKQALEAELEEQRRHHQREVGS 758

Query: 441  DRSQLRQSVMAKEAELKALVASIGENTTQFKVNEKHASLKEQLAAVTPL 587
               Q   +V   E  LK  ++ +G       ++E+   L+E+ A V  L
Sbjct: 759  ISEQQELTVRRAEKALKDELSRLGA-----LLDERDEHLRERQARVQDL 802

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>CMC1_MOUSE (Q8BH59) Calcium-binding mitochondrial carrier protein Aralar1|
           (Mitochondrial aspartate glutamate carrier 1) (Solute
           carrier family 25 member 12)
          Length = 677

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = -3

Query: 349 PISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMA-VSPISSLQKKEEAAVEADGETPA 173
           P+  H C    + E   V  + L  AG  +  PA + V+P   ++ + + A  A   T +
Sbjct: 500 PVYAH-CKLLLADENGRVGGINLLTAGALAGVPAASLVTPADVIKTRLQVAARAGQTTYS 558

Query: 172 APSDCTRRPLALLGPAVLAKG---RTKKSNP 89
              DC R+ L   GP+   KG   R  +S+P
Sbjct: 559 GVVDCFRKILREEGPSAFWKGTAARVFRSSP 589

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>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic|
           region
          Length = 551

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = -3

Query: 595 SSKRGVTAASCSFNDACFSFTLNCVVFSPIEATKALSSASLAI-TDWRSWXXXXXXXSTF 419
           SS   VT++S S + +  S +   +  S    T  ++S S  + +   S        ++ 
Sbjct: 117 SSSSEVTSSSSSSSISPSSSSSTIISSSSSLPTFTVASTSSTVASSTLSTSSSLVISTSS 176

Query: 418 RRYTCIHSASSSWNIRSLSCSRSPISVHICSSSRSREPHGVSKLT 284
             +T    +SSS    S+S S S  SV++ SSS S  P   S+LT
Sbjct: 177 STFTFSSESSSSLISSSISTSVSTSSVYVPSSSTSSPPSSSSELT 221

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>GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing protein 2 (Golgi|
            coiled coil protein GCC185)
          Length = 1679

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = +3

Query: 309  SLLRELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRSQLRQSVMAKEAEL 488
            SL++ELE+    + +  +DKD    +++   +   ++++DS   +   LR+ + +  +E 
Sbjct: 935  SLVKELEEKIESLEKESKDKDEKISKIKLVAVKA-KKELDSNRKEAQTLREELESVRSEK 993

Query: 489  KALVASIGE 515
              L AS+ E
Sbjct: 994  DRLSASMKE 1002

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>ANM8_MOUSE (Q6PAK3) Protein arginine N-methyltransferase 8 (EC 2.1.1.-)|
           (Heterogeneous nuclear ribonucleoprotein
           methyltransferase-like protein 4)
          Length = 394

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 18/61 (29%)
 Frame = -2

Query: 341 CPYLLELAQQGAARRVEADAAPRRPVQPV------------------PGHGRLAHLLSPE 216
           C  L     + A    E  +AP +P QPV                  PG G+++ LL+PE
Sbjct: 9   CLLLRRKMAENAVESTEVSSAPPQPPQPVIPAKPVQCVHHVSTQPSCPGRGKMSKLLNPE 68

Query: 215 E 213
           E
Sbjct: 69  E 69

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>LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (PSD-Zip70)|
          Length = 600

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 270 PARCSVSFDTPCGSLLRELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRS 449
           P    ++F     +L REL+++  E+ E  Q  D+M    + E + V++ + +     + 
Sbjct: 490 PPGIGLTFSEDIPALQRELDRLRAELKEERQGHDQMSSGFQHERL-VWKEEKEKVIQYQK 548

Query: 450 QLRQSVMA 473
           QL+QS +A
Sbjct: 549 QLQQSYLA 556

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>GAT5B_XENLA (P43696) GATA-binding factor 5-B (Transcription factor xGATA-5B)|
          Length = 388

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 23/78 (29%), Positives = 33/78 (42%)
 Frame = -3

Query: 370 SLSCSRSPISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMAVSPISSLQKKEEAAVEA 191
           S S + SP SV       + +P  V K       ++S YP  A+ P+S  Q + +  V  
Sbjct: 302 STSANNSPSSV------TNTDPTPVLKT---EPNITSHYPGQAIVPVSQGQSQTDDLVNG 352

Query: 190 DGETPAAPSDCTRRPLAL 137
             E    P + T  P AL
Sbjct: 353 SHELKYIPEEYTYSPSAL 370

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>LMNA_CHICK (P13648) Lamin-A|
          Length = 657

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
 Frame = +3

Query: 420 KVDSANADRSQLRQSVMAKEAELKALVASIGEN---------TTQFKVNEKHASLKEQLA 572
           ++DS +A+ SQL++ + AKEA+L+ +  ++              + ++ E  A +++QL 
Sbjct: 297 RIDSLSAELSQLQKQLAAKEAKLREVEEALSREREGGRRLLAEKEREMAEMRARMQQQLD 356

Query: 573 AVTPLLD 593
               LLD
Sbjct: 357 EYQELLD 363

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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -3

Query: 235 PISSLQKKEEAAVEADGETPAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNH 56
           P + L+K+ +AAVE+D  T     + + +  +   P+   +   K   P A   P     
Sbjct: 2   PSTDLKKQADAAVESDVNTNNEAVESSTKEESSNTPSTETQPEKKAEEPEAAAEPSESTS 61

Query: 55  QPFSPFSLLAARQTAP 8
            P +  S+     TAP
Sbjct: 62  TPTNASSVATPSGTAP 77

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>LVA_DROME (Q8MSS1) Protein lava lamp|
          Length = 2779

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = +3

Query: 318  RELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRSQLR------QSVMAKE 479
            ++L++ + E+G+REQ + R  + L +E           A   R QL       +S++AK 
Sbjct: 1466 QQLQERFYELGQREQAQSRQLELLTSE-----------AEESRQQLAGLRTEYESLLAKH 1514

Query: 480  AELKALVASIGENTTQFKVNEKHASLKEQL 569
            ++L A   +  E  +     E+ A L++QL
Sbjct: 1515 SQLTATAQAEREQMSSHS-QEELAELRQQL 1543

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>CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)|
          Length = 203

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = -3

Query: 301 GVSKLTLHRAGLSSPYPAMAVSPISSLQKKEEAAVEADGETPAAPSDCTRRPLALLGP 128
           G S   L  AGLS P P+ A  P+S   +++ AA+ A    PA   D  RR  A L P
Sbjct: 60  GFSPPRLPLAGLSGPAPSHAGLPVSERLRQDAAALSA---LPAL-LDAVRRRQAELNP 113

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>NAF1_HUMAN (Q15025) Nef-associated factor 1 (Naf1) (TNFAIP3-interacting|
           protein 1) (HIV-1 Nef-interacting protein)
           (Virion-associated nuclear shuttling protein) (VAN)
           (hVAN) (Nip40-1)
          Length = 636

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
 Frame = +3

Query: 309 SLLRELEQIWTEIGEREQDKDRMFQELEAE----------CMHVYRRKVDSANADRSQLR 458
           S+ ++ EQ  TE+ ++  D  +   +LEAE           + + + K++    D+ QL 
Sbjct: 326 SMKQQYEQKITELRQKLADLQKQVTDLEAEREQKQRDFDRKLLLAKSKIEMEETDKEQLT 385

Query: 459 QSVMAKEAELKALVASIGENTTQFKVNEK-----HASLKEQLAAVTP 584
                   ++K L   +   T Q +  EK     + +L+E L+  TP
Sbjct: 386 AEAKELRQKVKYLQDQLSPLTRQREYQEKEIQRLNKALEEALSIQTP 432

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>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)|
          Length = 575

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
 Frame = -3

Query: 355 RSPISVHICSSSRSREPHGVSKLTLHRAGLSSPYPAMAVSPISSLQKKEEAAVEADGETP 176
           +SP S H CS+++S  PH       H   L +P P ++  P+  L+      V +     
Sbjct: 3   QSPTSYHACSNNQSPFPHS------HHPPLHNPLP-VSCQPV--LRPPPVPQVPSHWYPV 53

Query: 175 AAPS-DCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIRNHQPFSPFS 35
           + PS +   +P++   P V+      + +PN R P  I NH   SP S
Sbjct: 54  SLPSPNLPHQPIS--KPPVIPNLPKLQVHPN-RLPHPIHNHPYSSPTS 98

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>HIS6_DEIRA (Q9RWD7) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 261

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 27  ARREKGEKGWWLRIPGGRRALGLDFL 104
           A+R  G +GW + I GGR   GLD L
Sbjct: 132 AKRRPGGQGWTVHIGGGRVDTGLDLL 157

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>ACK1_MOUSE (O54967) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Non-receptor|
            protein tyrosine kinase Ack) (Tyrosine kinase
            non-receptor protein 2)
          Length = 1055

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 178  PAAPSDCTRRPLALLGPAVLAKGRTKKSNPNARRPPGIR 62
            PAAP+  T RP+    P   A   T  SNP A RPP +R
Sbjct: 917  PAAPT-ATVRPMPQAAPDPKANFSTNNSNPGA-RPPSLR 953

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>LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 (F37/Esophageal|
           cancer-related gene-coding leucine-zipper motif) (Fez1)
          Length = 598

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 270 PARCSVSFDTPCGSLLRELEQIWTEIGEREQDKDRMFQELEAECMHVYRRKVDSANADRS 449
           P    ++F     +L REL+++  E+ E  Q  D+M    + E + V++ + +     + 
Sbjct: 488 PPGVGLTFSEDIPALQRELDRLRAELKEERQGHDQMSSGFQHERL-VWKEEKEKVIQYQR 546

Query: 450 QLRQSVMA 473
           QL+QS +A
Sbjct: 547 QLQQSYLA 554

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>GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
 Frame = -3

Query: 394 ASSSWNIRSLSCSRSPISVHICSSSRSREPHGVSKLTLHRA---GLSSPYPA-----MAV 239
           A +S ++ S   + SP+S    SSS   +P G+  +   R+   G+S   P+     + +
Sbjct: 138 AFASGSLLSTDPTISPMSPSSSSSSGHEDPLGIMGVNRRRSPLEGVSLDVPSHIDSKVRI 197

Query: 238 SPISSLQKKEEAAVEADG 185
           SP+ SL+ K+  A +  G
Sbjct: 198 SPVPSLRLKKSRATKVQG 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,644,326
Number of Sequences: 219361
Number of extensions: 1496945
Number of successful extensions: 6918
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 6427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6879
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result