ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
2dbj|AK067660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
3dbj|AK064951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
4ref|XM_470643.1| Oryza sativa (japonica cultivar-group), predic... 285 8e-74
5dbj|AK065181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 190 4e-45
7gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 190 4e-45
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
9gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome... 190 4e-45
10dbj|AK111547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
11ref|XM_466316.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.033
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
13dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
14dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
16emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4,... 46 0.13
17gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-... 44 0.52
18dbj|AK142286.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 44 0.52
19dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
21gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, co... 44 0.52
22dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
23dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
24dbj|AK107199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
25emb|AL935028.14| Zebrafish DNA sequence from clone XX-95K20, com... 44 0.52
26emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chr... 44 0.52
27ref|XM_323502.1| Neurospora crassa OR74A predicted protein (NCU0... 42 2.1
28ref|XM_955628.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.1
29gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 2.1
30gb|AC112268.3| Mus musculus BAC clone RP24-114C23 from 2, comple... 42 2.1
31emb|AL513445.1|NCB7A16 Neurospora crassa DNA linkage group V BAC... 42 2.1
32gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.1
33dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.1
34emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on ch... 42 2.1
35dbj|AP002951.1| Platichthys bicoloratus mitochondrial DNA, compl... 42 2.1
36ref|NM_117275.2| Arabidopsis thaliana unknown protein AT4G12050 ... 40 8.2
37ref|XM_480469.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.2
38gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital ... 40 8.2
39gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 8.2
40gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, co... 40 8.2
41gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosom... 40 8.2
42gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete... 40 8.2
43gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, comple... 40 8.2
44gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 o... 40 8.2
45gb|BT009731.1| Arabidopsis thaliana At4g12050 gene, complete cds 40 8.2
46gb|AC093331.9| Homo sapiens chromosome 8, clone RP11-59O2, compl... 40 8.2
47emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, ... 40 8.2
48emb|AL049638.1|ATF16J13 Arabidopsis thaliana DNA chromosome 4, B... 40 8.2
49gb|AY118342.1| Drosophila melanogaster LD46263 full insert cDNA 40 8.2
50gb|AE012535.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.2
51ref|NM_136784.3| Drosophila melanogaster CG12942-RA (CG12942), mRNA 40 8.2
52gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, comple... 40 8.2
53gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromo... 40 8.2
54gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 8.2
55gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.2
56gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 8.2
57dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
58gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome 2R, r... 40 8.2
59emb|BX820422.1|CNS0A8Q3 Arabidopsis thaliana Full-length cDNA Co... 40 8.2
60gb|AC009156.10| Homo sapiens chromosome 16 clone RP11-5G20, comp... 40 8.2
61gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 8.2
62dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 8.2
63dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
64emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chr... 40 8.2
65dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
66dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
67dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
68gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, comple... 40 8.2
69gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22... 40 8.2
70gb|AC162375.2| Mus musculus BAC clone RP24-466F1 from chromosome... 40 8.2
71dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.2
72gb|AC005437.1|AC005437 Drosophila melanogaster DNA sequence (P1 ... 40 8.2
73emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in ... 40 8.2
74emb|AL158141.14| Human DNA sequence from clone RP11-351K23 on ch... 40 8.2
75gb|AC134327.2| Mus musculus BAC clone RP24-270O22 from 1, comple... 40 8.2
76emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on ch... 40 8.2 
>dbj|AK066517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069B13, full
           insert sequence
          Length = 1788

 Score =  301 bits (152), Expect = 1e-78
 Identities = 322/378 (85%), Gaps = 3/378 (0%)
 Strand = Plus / Plus

                                                                       
Query: 223 gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
           ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 330 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 389

                                                                       
Query: 283 gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgagcaaatatggacag 342
           ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| |
Sbjct: 390 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgagcaaatatggactg 449

                                                                       
Query: 343 agatcggggagcgcgaacaagataaagatcggatgttccaagaactcgaagcggagtgta 402
           |||| |||||||||||| ||||||||||||| ||||||  |||||| ||| | ||||| |
Sbjct: 450 agattggggagcgcgaagaagataaagatcgcatgttcttagaacttgaaacagagtgca 509

                                                                       
Query: 403 tgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaagccagctccgccagt 462
           |||  ||||| ||||| ||||| || ||||| |||||||| |||  ||||||||| ||||
Sbjct: 510 tgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagatcccagctccgtcagt 569

                                                                       
Query: 463 cagtgatggccaaagaagcagagcttaaagctttagtggcttcgataggtgaaaatacta 522
           || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||  
Sbjct: 570 cattgatggccaaagaagcagagcttaaagttttagtggcttcaataggtgaaattaccc 629

                                                                       
Query: 523 cacaatttaaggtgaatgaaaagcatgcatcgttgaaagaacaacttgctgcagtgacgc 582
           || ||||||||||| ||||||||||   ||| |||||||| ||||||||   ||||||||
Sbjct: 630 caaaatttaaggtggatgaaaagca---atcattgaaagagcaacttgccaaagtgacgc 686

                             
Query: 583 ctctcttggatgatctca 600
           ||||  |||| |||||||
Sbjct: 687 ctctactggaagatctca 704
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>dbj|AK067660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C06, full
           insert sequence
          Length = 3638

 Score =  301 bits (152), Expect = 1e-78
 Identities = 322/378 (85%), Gaps = 3/378 (0%)
 Strand = Plus / Plus

                                                                       
Query: 223 gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
           ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 286 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 345

                                                                       
Query: 283 gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgagcaaatatggacag 342
           ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| |
Sbjct: 346 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgagcaaatatggactg 405

                                                                       
Query: 343 agatcggggagcgcgaacaagataaagatcggatgttccaagaactcgaagcggagtgta 402
           |||| |||||||||||| ||||||||||||| ||||||  |||||| ||| | ||||| |
Sbjct: 406 agattggggagcgcgaagaagataaagatcgcatgttcttagaacttgaaacagagtgca 465

                                                                       
Query: 403 tgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaagccagctccgccagt 462
           |||  ||||| ||||| ||||| || ||||| |||||||| |||  ||||||||| ||||
Sbjct: 466 tgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagatcccagctccgtcagt 525

                                                                       
Query: 463 cagtgatggccaaagaagcagagcttaaagctttagtggcttcgataggtgaaaatacta 522
           || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||  
Sbjct: 526 cattgatggccaaagaagcagagcttaaagttttagtggcttcaataggtgaaattaccc 585

                                                                       
Query: 523 cacaatttaaggtgaatgaaaagcatgcatcgttgaaagaacaacttgctgcagtgacgc 582
           || ||||||||||| ||||||||||   ||| |||||||| ||||||||   ||||||||
Sbjct: 586 caaaatttaaggtggatgaaaagca---atcattgaaagagcaacttgccaaagtgacgc 642

                             
Query: 583 ctctcttggatgatctca 600
           ||||  |||| |||||||
Sbjct: 643 ctctactggaagatctca 660
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>dbj|AK064951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P23, full
           insert sequence
          Length = 3153

 Score =  301 bits (152), Expect = 1e-78
 Identities = 322/378 (85%), Gaps = 3/378 (0%)
 Strand = Plus / Plus

                                                                       
Query: 223 gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
           ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 287 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 346

                                                                       
Query: 283 gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgagcaaatatggacag 342
           ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| |
Sbjct: 347 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgagcaaatatggactg 406

                                                                       
Query: 343 agatcggggagcgcgaacaagataaagatcggatgttccaagaactcgaagcggagtgta 402
           |||| |||||||||||| ||||||||||||| ||||||  |||||| ||| | ||||| |
Sbjct: 407 agattggggagcgcgaagaagataaagatcgcatgttcttagaacttgaaacagagtgca 466

                                                                       
Query: 403 tgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaagccagctccgccagt 462
           |||  ||||| ||||| ||||| || ||||| |||||||| |||  ||||||||| ||||
Sbjct: 467 tgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagatcccagctccgtcagt 526

                                                                       
Query: 463 cagtgatggccaaagaagcagagcttaaagctttagtggcttcgataggtgaaaatacta 522
           || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||  
Sbjct: 527 cattgatggccaaagaagcagagcttaaagttttagtggcttcaataggtgaaattaccc 586

                                                                       
Query: 523 cacaatttaaggtgaatgaaaagcatgcatcgttgaaagaacaacttgctgcagtgacgc 582
           || ||||||||||| ||||||||||   ||| |||||||| ||||||||   ||||||||
Sbjct: 587 caaaatttaaggtggatgaaaagca---atcattgaaagagcaacttgccaaagtgacgc 643

                             
Query: 583 ctctcttggatgatctca 600
           ||||  |||| |||||||
Sbjct: 644 ctctactggaagatctca 661
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>ref|XM_470643.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1824

 Score =  285 bits (144), Expect = 8e-74
 Identities = 302/354 (85%), Gaps = 3/354 (0%)
 Strand = Plus / Plus

                                                                       
Query: 247 tggccgggtacgggctggacaggccggcgcggtgcagcgtcagcttcgacacgccgtgcg 306
           |||||||||| ||  |||||| | ||| | || |||||||||||||||| ||||||||||
Sbjct: 8   tggccgggtatggcatggacaaggcggtgaggagcagcgtcagcttcgagacgccgtgcg 67

                                                                       
Query: 307 gctccctgctgcgcgagctcgagcaaatatggacagagatcggggagcgcgaacaagata 366
           ||   ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||
Sbjct: 68  gcaggctgctgcgcgagctcgagcaaatatggactgagattggggagcgcgaagaagata 127

                                                                       
Query: 367 aagatcggatgttccaagaactcgaagcggagtgtatgcacgtgtatcgtcggaaggtcg 426
           ||||||| ||||||  |||||| ||| | ||||| ||||  ||||| ||||| ||||| |
Sbjct: 128 aagatcgcatgttcttagaacttgaaacagagtgcatgcgtgtgtaccgtcgaaaggttg 187

                                                                       
Query: 427 acagtgctaatgctgatagaagccagctccgccagtcagtgatggccaaagaagcagagc 486
           | ||||| |||||||| |||  ||||||||| |||||| |||||||||||||||||||||
Sbjct: 188 atagtgccaatgctgagagatcccagctccgtcagtcattgatggccaaagaagcagagc 247

                                                                       
Query: 487 ttaaagctttagtggcttcgataggtgaaaatactacacaatttaaggtgaatgaaaagc 546
           |||||| |||||||||||| |||||||||| |||  || ||||||||||| |||||||||
Sbjct: 248 ttaaagttttagtggcttcaataggtgaaattaccccaaaatttaaggtggatgaaaagc 307

                                                                 
Query: 547 atgcatcgttgaaagaacaacttgctgcagtgacgcctctcttggatgatctca 600
           |   ||| |||||||| ||||||||   ||||||||||||  |||| |||||||
Sbjct: 308 a---atcattgaaagagcaacttgccaaagtgacgcctctactggaagatctca 358
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>dbj|AK065181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D18, full
           insert sequence
          Length = 2554

 Score =  272 bits (137), Expect = 1e-69
 Identities = 319/378 (84%), Gaps = 5/378 (1%)
 Strand = Plus / Plus

                                                                       
Query: 223 gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
           ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 286 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 345

                                                                       
Query: 283 gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgagcaaatatggacag 342
           ||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| |
Sbjct: 346 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgagcaaatatggactg 405

                                                                       
Query: 343 agatcggggagcgcgaacaagataaagatcggatgttccaagaactcgaagcggagtgta 402
           |||| ||| |||||||| ||||||||||||| ||||||  |||||| ||| | ||||| |
Sbjct: 406 agattgggtagcgcgaagaagataaagatcgcatgttcttagaacttgaaacagagtgca 465

                                                                       
Query: 403 tgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaagccagctccgccagt 462
           |||  ||||| ||||| ||||| || ||||| |||||||| |||  ||||||||| ||||
Sbjct: 466 tgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagatcccagctccgtcagt 525

                                                                       
Query: 463 cagtgatggccaaagaagcagagcttaaagctttagtggcttcgataggtgaaaatacta 522
           || ||||||||||||||||||||||||||| |||||||||||| ||||||||   |||  
Sbjct: 526 cattgatggccaaagaagcagagcttaaagttttagtggcttcaataggtgat--taccc 583

                                                                       
Query: 523 cacaatttaaggtgaatgaaaagcatgcatcgttgaaagaacaacttgctgcagtgacgc 582
           || ||||||||||| ||||||||||   ||| |||||||| ||||||||   ||||||||
Sbjct: 584 caaaatttaaggtggatgaaaagca---atcattgaaagagcaacttgccaaagtgacgc 640

                             
Query: 583 ctctcttggatgatctca 600
           ||||  |||| |||||||
Sbjct: 641 ctctactggaagatctca 658
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  190 bits (96), Expect = 4e-45
 Identities = 180/208 (86%)
 Strand = Plus / Minus

                                                                           
Query: 328     agcaaatatggacagagatcggggagcgcgaacaagataaagatcggatgttccaagaac 387
               ||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||  |||||
Sbjct: 7252126 agcaaatatggactgagattggggagcgcgaagaagataaagatcgcatgttcttagaac 7252067

                                                                           
Query: 388     tcgaagcggagtgtatgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaa 447
               | ||| | ||||| ||||  ||||| ||||| ||||| || ||||| |||||||| ||| 
Sbjct: 7252066 ttgaaacagagtgcatgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagat 7252007

                                                                           
Query: 448     gccagctccgccagtcagtgatggccaaagaagcagagcttaaagctttagtggcttcga 507
                ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 7252006 cccagctccgtcagtcattgatggccaaagaagcagagcttaaagttttagtggcttcaa 7251947

                                           
Query: 508     taggtgaaaatactacacaatttaaggt 535
               ||||||||| |||  || ||||||||||
Sbjct: 7251946 taggtgaaattaccccaaaatttaaggt 7251919



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 223     gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
               ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 7253545 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 7253486

                                                              
Query: 283     gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgag 329
               ||||||||||||| ||||||||||||   ||||||||||||||||||
Sbjct: 7253485 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgag 7253439
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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score =  190 bits (96), Expect = 4e-45
 Identities = 180/208 (86%)
 Strand = Plus / Minus

                                                                        
Query: 328  agcaaatatggacagagatcggggagcgcgaacaagataaagatcggatgttccaagaac 387
            ||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||  |||||
Sbjct: 3382 agcaaatatggactgagattggggagcgcgaagaagataaagatcgcatgttcttagaac 3323

                                                                        
Query: 388  tcgaagcggagtgtatgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaa 447
            | ||| | ||||| ||||  ||||| ||||| ||||| || ||||| |||||||| ||| 
Sbjct: 3322 ttgaaacagagtgcatgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagat 3263

                                                                        
Query: 448  gccagctccgccagtcagtgatggccaaagaagcagagcttaaagctttagtggcttcga 507
             ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 3262 cccagctccgtcagtcattgatggccaaagaagcagagcttaaagttttagtggcttcaa 3203

                                        
Query: 508  taggtgaaaatactacacaatttaaggt 535
            ||||||||| |||  || ||||||||||
Sbjct: 3202 taggtgaaattaccccaaaatttaaggt 3175



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 223  gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
            ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 4801 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 4742

                                                           
Query: 283  gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgag 329
            ||||||||||||| ||||||||||||   ||||||||||||||||||
Sbjct: 4741 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgag 4695
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  190 bits (96), Expect = 4e-45
 Identities = 180/208 (86%)
 Strand = Plus / Minus

                                                                           
Query: 328     agcaaatatggacagagatcggggagcgcgaacaagataaagatcggatgttccaagaac 387
               ||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||  |||||
Sbjct: 7250021 agcaaatatggactgagattggggagcgcgaagaagataaagatcgcatgttcttagaac 7249962

                                                                           
Query: 388     tcgaagcggagtgtatgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaa 447
               | ||| | ||||| ||||  ||||| ||||| ||||| || ||||| |||||||| ||| 
Sbjct: 7249961 ttgaaacagagtgcatgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagat 7249902

                                                                           
Query: 448     gccagctccgccagtcagtgatggccaaagaagcagagcttaaagctttagtggcttcga 507
                ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 7249901 cccagctccgtcagtcattgatggccaaagaagcagagcttaaagttttagtggcttcaa 7249842

                                           
Query: 508     taggtgaaaatactacacaatttaaggt 535
               ||||||||| |||  || ||||||||||
Sbjct: 7249841 taggtgaaattaccccaaaatttaaggt 7249814



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 223     gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
               ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 7251440 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 7251381

                                                              
Query: 283     gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgag 329
               ||||||||||||| ||||||||||||   ||||||||||||||||||
Sbjct: 7251380 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgag 7251334
to top
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05,
             complete sequence
          Length = 99133

 Score =  190 bits (96), Expect = 4e-45
 Identities = 180/208 (86%)
 Strand = Plus / Minus

                                                                         
Query: 328   agcaaatatggacagagatcggggagcgcgaacaagataaagatcggatgttccaagaac 387
             ||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||  |||||
Sbjct: 78879 agcaaatatggactgagattggggagcgcgaagaagataaagatcgcatgttcttagaac 78820

                                                                         
Query: 388   tcgaagcggagtgtatgcacgtgtatcgtcggaaggtcgacagtgctaatgctgatagaa 447
             | ||| | ||||| ||||  ||||| ||||| ||||| || ||||| |||||||| ||| 
Sbjct: 78819 ttgaaacagagtgcatgcgtgtgtaccgtcgaaaggttgatagtgccaatgctgagagat 78760

                                                                         
Query: 448   gccagctccgccagtcagtgatggccaaagaagcagagcttaaagctttagtggcttcga 507
              ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 78759 cccagctccgtcagtcattgatggccaaagaagcagagcttaaagttttagtggcttcaa 78700

                                         
Query: 508   taggtgaaaatactacacaatttaaggt 535
             ||||||||| |||  || ||||||||||
Sbjct: 78699 taggtgaaattaccccaaaatttaaggt 78672



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                         
Query: 223   gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
             ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 80298 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 80239

                                                            
Query: 283   gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgag 329
             ||||||||||||| ||||||||||||   ||||||||||||||||||
Sbjct: 80238 gcgtcagcttcgagacgccgtgcggcaggctgctgcgcgagctcgag 80192
to top
>dbj|AK111547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D16, full
           insert sequence
          Length = 1840

 Score =  105 bits (53), Expect = 2e-19
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                       
Query: 223 gagaggagatgggcgagacggccatggccgggtacgggctggacaggccggcgcggtgca 282
           ||||| |||||||||||| || | |||||||||| ||  |||||| | ||| | || |||
Sbjct: 288 gagagtagatgggcgagatggtcttggccgggtatggcatggacaaggcggtgaggagca 347

                                                                       
Query: 283 gcgtcagcttcgacacgccgtgcggctccctgctgcgcgagctcgagcaaatatggacag 342
           ||||||||||||  ||||||||||||   ||||||||||||||||||||||||||||| |
Sbjct: 348 gcgtcagcttcgggacgccgtgcggcaggctgctgcgcgagctcgagcaaatatggactg 407

                    
Query: 343 agatcgggg 351
           |||| ||||
Sbjct: 408 agattgggg 416
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>ref|XM_466316.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 213

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 193 cctccaccgccgcttcctccttct 216
           ||||||||||||||||||||||||
Sbjct: 70  cctccaccgccgcttcctccttct 47
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 193      cctccaccgccgcttcctccttct 216
                ||||||||||||||||||||||||
Sbjct: 21636307 cctccaccgccgcttcctccttct 21636284
to top
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 193    cctccaccgccgcttcctccttct 216
              ||||||||||||||||||||||||
Sbjct: 125257 cctccaccgccgcttcctccttct 125234
to top
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0025F02
          Length = 156545

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 193   cctccaccgccgcttcctccttct 216
             ||||||||||||||||||||||||
Sbjct: 17704 cctccaccgccgcttcctccttct 17681
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 188      atctgcctccaccgccgcttcct 210
                |||||||||||||||||||||||
Sbjct: 11640328 atctgcctccaccgccgcttcct 11640350
to top
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
              complete sequence
          Length = 164911

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 188    atctgcctccaccgccgcttcct 210
              |||||||||||||||||||||||
Sbjct: 123338 atctgcctccaccgccgcttcct 123360
to top
>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete
             sequence
          Length = 119664

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 30    aggagagagaagggggagaagg 51
             ||||||||||||||||||||||
Sbjct: 82903 aggagagagaagggggagaagg 82882
to top
>dbj|AK142286.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330032H03 product:methylmalonic aciduria
           (cobalamin deficiency) type B homolog (human), full
           insert sequence
          Length = 1824

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 375 atgttccaagaactcgaagcgg 396
           ||||||||||||||||||||||
Sbjct: 769 atgttccaagaactcgaagcgg 790
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 194      ctccaccgccgcttcctccttcttct 219
                |||||||||||||||| |||||||||
Sbjct: 12907031 ctccaccgccgcttcccccttcttct 12907006
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 193      cctccaccgccgcttcctccttcttc 218
                |||||||| |||||||||||||||||
Sbjct: 35341255 cctccacccccgcttcctccttcttc 35341280
to top
>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence
          Length = 180157

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 190   ctgcctccaccgccgcttcctccttcttct 219
             |||||||| ||||||| |||||||||||||
Sbjct: 48003 ctgcctccgccgccgcctcctccttcttct 47974
to top
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E11
          Length = 146083

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 193    cctccaccgccgcttcctccttcttc 218
              |||||||| |||||||||||||||||
Sbjct: 105116 cctccacccccgcttcctccttcttc 105141
to top
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0505H05
          Length = 152845

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 194   ctccaccgccgcttcctccttcttct 219
             |||||||||||||||| |||||||||
Sbjct: 69015 ctccaccgccgcttcccccttcttct 68990
to top
>dbj|AK107199.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-B01, full
           insert sequence
          Length = 2058

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 193 cctccaccgccgcttcctccttcttc 218
           |||||||| |||||||||||||||||
Sbjct: 15  cctccacccccgcttcctccttcttc 40
to top
>emb|AL935028.14| Zebrafish DNA sequence from clone XX-95K20, complete sequence
          Length = 78340

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 522   acacaatttaaggtgaatgaaa 543
             ||||||||||||||||||||||
Sbjct: 49685 acacaatttaaggtgaatgaaa 49664
to top
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete
             sequence
          Length = 209053

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    aggagagagaagggggagaagg 51
             ||||||||||||||||||||||
Sbjct: 52475 aggagagagaagggggagaagg 52496
to top
>ref|XM_323502.1| Neurospora crassa OR74A predicted protein (NCU04163.1) partial mRNA
          Length = 981

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 32  gagagagaagggggagaaggg 52
           |||||||||||||||||||||
Sbjct: 888 gagagagaagggggagaaggg 908
to top
>ref|XM_955628.1| Neurospora crassa OR74A hypothetical protein (NCU04163.1) partial
           mRNA
          Length = 981

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 32  gagagagaagggggagaaggg 52
           |||||||||||||||||||||
Sbjct: 888 gagagagaagggggagaaggg 908
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 310     ccctgctgcgcgagctcgagc 330
               |||||||||||||||||||||
Sbjct: 2926360 ccctgctgcgcgagctcgagc 2926340
to top
>gb|AC112268.3| Mus musculus BAC clone RP24-114C23 from 2, complete sequence
          Length = 167775

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     gcgaggagagagaagggggag 47
              |||||||||||||||||||||
Sbjct: 146678 gcgaggagagagaagggggag 146658
to top
>emb|AL513445.1|NCB7A16 Neurospora crassa DNA linkage group V BAC clone B7A16
          Length = 74014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    gagagagaagggggagaaggg 52
             |||||||||||||||||||||
Sbjct: 56056 gagagagaagggggagaaggg 56076
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 265     acaggccggcgcggtgcagcg 285
               |||||||||||||||||||||
Sbjct: 2343292 acaggccggcgcggtgcagcg 2343312
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 286     tcagcttcgacacgccgtgcg 306
               |||||||||||||||||||||
Sbjct: 1588569 tcagcttcgacacgccgtgcg 1588549



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     gctgcgcgagctcgagcaaa 333
               ||||||||||||||||||||
Sbjct: 5813286 gctgcgcgagctcgagcaaa 5813305
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>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete
             sequence
          Length = 194209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    gcgaggagagagaagggggag 47
             |||||||||||||||||||||
Sbjct: 43352 gcgaggagagagaagggggag 43332
to top
>dbj|AP002951.1| Platichthys bicoloratus mitochondrial DNA, complete genome, except
            for D-loop
          Length = 15973

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 474  aaagaagcagagcttaaagct 494
            |||||||||||||||||||||
Sbjct: 1277 aaagaagcagagcttaaagct 1297
to top
>ref|NM_117275.2| Arabidopsis thaliana unknown protein AT4G12050 mRNA, complete cds
          Length = 1504

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 cctccaccgccgcttcctccttct 216
           |||||||| |||||||||||||||
Sbjct: 502 cctccaccaccgcttcctccttct 479
to top
>ref|XM_480469.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 324

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 cctccaccgccgcttcctccttct 216
           |||||||||||||| |||||||||
Sbjct: 154 cctccaccgccgctgcctccttct 131
to top
>gb|AC150530.4| Bos taurus  BAC CH240-86O22 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 190177

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   aaaatactacacaatttaag 533
             ||||||||||||||||||||
Sbjct: 55498 aaaatactacacaatttaag 55517
to top
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 241     cggccatggccgggtacgggctgg 264
               |||||||||||||||||| |||||
Sbjct: 2122473 cggccatggccgggtacgcgctgg 2122496
to top
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence
          Length = 152414

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   aaagaacaacttgctgcagt 577
             ||||||||||||||||||||
Sbjct: 88852 aaagaacaacttgctgcagt 88871
to top
>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete sequence
          Length = 217754

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     gaggagagagaagggggagaaggg 52
              ||||||||||||||| ||||||||
Sbjct: 209828 gaggagagagaagggagagaaggg 209805
to top
>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence
          Length = 234834

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gagagagaagggggagaagg 51
              ||||||||||||||||||||
Sbjct: 145968 gagagagaagggggagaagg 145987
to top
>gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, complete sequence
          Length = 209039

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gagagagaagggggagaagg 51
              ||||||||||||||||||||
Sbjct: 161224 gagagagaagggggagaagg 161243
to top
>gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 of the complete genome
          Length = 300380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 476   agaagcagagcttaaagctttagt 499
             |||| |||||||||||||||||||
Sbjct: 99221 agaaacagagcttaaagctttagt 99244
to top
>gb|BT009731.1| Arabidopsis thaliana At4g12050 gene, complete cds
          Length = 1020

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 cctccaccgccgcttcctccttct 216
           |||||||| |||||||||||||||
Sbjct: 332 cctccaccaccgcttcctccttct 309
to top
>gb|AC093331.9| Homo sapiens chromosome 8, clone RP11-59O2, complete sequence
          Length = 170974

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   gtgaaaatactacacaattt 530
             ||||||||||||||||||||
Sbjct: 14940 gtgaaaatactacacaattt 14921
to top
>emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 33
          Length = 190026

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cctccaccgccgcttcctccttct 216
             |||||||| |||||||||||||||
Sbjct: 77975 cctccaccaccgcttcctccttct 77998
to top
>emb|AL049638.1|ATF16J13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F16J13 (ESSA project)
          Length = 107600

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cctccaccgccgcttcctccttct 216
             |||||||| |||||||||||||||
Sbjct: 54145 cctccaccaccgcttcctccttct 54168
to top
>gb|AY118342.1| Drosophila melanogaster LD46263 full insert cDNA
          Length = 2454

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  ccctgctgcgcgagctcgagcaaa 333
            ||||||||||||||| ||||||||
Sbjct: 1732 ccctgctgcgcgagcacgagcaaa 1755
to top
>gb|AE012535.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 443 of
             460 of the complete genome
          Length = 11047

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   gaggagatgggcgagacggccatg 248
             |||| |||||||||||||||||||
Sbjct: 10904 gaggcgatgggcgagacggccatg 10927
to top
>ref|NM_136784.3| Drosophila melanogaster CG12942-RA (CG12942), mRNA
          Length = 2429

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  ccctgctgcgcgagctcgagcaaa 333
            ||||||||||||||| ||||||||
Sbjct: 1726 ccctgctgcgcgagcacgagcaaa 1749
to top
>gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, complete sequence
          Length = 95304

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   gcagagcttaaagctttagt 499
             ||||||||||||||||||||
Sbjct: 39976 gcagagcttaaagctttagt 39995
to top
>gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromosome unknown, complete
              sequence
          Length = 197508

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 190    ctgcctccaccgccgcttcctcct 213
              |||||||||||||||| |||||||
Sbjct: 103401 ctgcctccaccgccgcctcctcct 103378
to top
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 476    agaagcagagcttaaagctttagt 499
              |||| |||||||||||||||||||
Sbjct: 438613 agaaacagagcttaaagctttagt 438590
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 225     gaggagatgggcgagacggccatg 248
               |||| |||||||||||||||||||
Sbjct: 4970389 gaggcgatgggcgagacggccatg 4970412
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     ccgtgccgcgaggagagagaaggg 43
              |||||| |||||||||||||||||
Sbjct: 197099 ccgtgcggcgaggagagagaaggg 197076
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 524     acaatttaaggtgaatgaaa 543
               ||||||||||||||||||||
Sbjct: 6056076 acaatttaaggtgaatgaaa 6056095



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 193     cctccaccgccgcttcctccttct 216
               |||||||||||||| |||||||||
Sbjct: 5276071 cctccaccgccgctgcctccttct 5276094
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>gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome 2R, region 47B-47C, BAC clone
             BACR13J10, complete sequence
          Length = 140940

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   ccctgctgcgcgagctcgagcaaa 333
             ||||||||||||||| ||||||||
Sbjct: 94272 ccctgctgcgcgagcacgagcaaa 94295
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>emb|BX820422.1|CNS0A8Q3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZE01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1570

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 193 cctccaccgccgcttcctccttct 216
           |||||||| |||||||||||||||
Sbjct: 646 cctccaccaccgcttcctccttct 669
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>gb|AC009156.10| Homo sapiens chromosome 16 clone RP11-5G20, complete sequence
          Length = 184884

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gaggagagagaagggggaga 48
              ||||||||||||||||||||
Sbjct: 108162 gaggagagagaagggggaga 108181
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    agaagcagagcttaaagctttagt 499
              |||| |||||||||||||||||||
Sbjct: 402584 agaaacagagcttaaagctttagt 402607
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 476    agaagcagagcttaaagctttagt 499
              |||| |||||||||||||||||||
Sbjct: 402293 agaaacagagcttaaagctttagt 402316
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>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_H11
          Length = 122464

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    acaatttaaggtgaatgaaa 543
              ||||||||||||||||||||
Sbjct: 106888 acaatttaaggtgaatgaaa 106907
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>emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chromosome X, complete
             sequence
          Length = 193860

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    gaggagagagaagggggagaaggg 52
             |||||||||||||||| |||||||
Sbjct: 44860 gaggagagagaaggggaagaaggg 44883
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>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    cctccaccgccgcttcctccttct 216
              |||||||||||||| |||||||||
Sbjct: 144427 cctccaccgccgctgcctccttct 144450
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>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cctccaccgccgcttcctccttct 216
             |||||||||||||| |||||||||
Sbjct: 67659 cctccaccgccgctgcctccttct 67682
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0486F07
          Length = 154926

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   acaatttaaggtgaatgaaa 543
             ||||||||||||||||||||
Sbjct: 12093 acaatttaaggtgaatgaaa 12112
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>gb|AC140200.4| Mus musculus BAC clone RP23-263K2 from 14, complete sequence
          Length = 168635

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     gaggagagagaagggggagaaggg 52
              ||||||||||||||| ||||||||
Sbjct: 145365 gaggagagagaagggagagaaggg 145388
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>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete
              sequence
          Length = 257907

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    ccctgctgcgcgagctcgagcaaa 333
              ||||||||||||||| ||||||||
Sbjct: 255222 ccctgctgcgcgagcacgagcaaa 255245
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>gb|AC162375.2| Mus musculus BAC clone RP24-466F1 from chromosome 9, complete sequence
          Length = 164119

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     gaggagagagaagggggagaaggg 52
              |||||||||| |||||||||||||
Sbjct: 142312 gaggagagagcagggggagaaggg 142335
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>dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-183A22, complete
              sequence
          Length = 159441

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     agagagaagggggagaaggg 52
              ||||||||||||||||||||
Sbjct: 128404 agagagaagggggagaaggg 128385
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>gb|AC005437.1|AC005437 Drosophila melanogaster DNA sequence (P1 DS00682 (D351)), complete
             sequence
          Length = 55227

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   ccctgctgcgcgagctcgagcaaa 333
             ||||||||||||||| ||||||||
Sbjct: 53259 ccctgctgcgcgagcacgagcaaa 53282
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>emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in linkage group 16,
             complete sequence
          Length = 245559

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   gaaaagcatgcatcgttgaa 559
             ||||||||||||||||||||
Sbjct: 37385 gaaaagcatgcatcgttgaa 37366
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>emb|AL158141.14| Human DNA sequence from clone RP11-351K23 on chromosome X Contains the
             5' end of the IGBP1 gene for immunoglobulin (CD79A)
             binding protein 1, a NADH dehydrogenase 5 (MTND5)
             pseudogene, a cytochrome b family pseudogene, a novel
             gene, the 3' end of the ED1 gene for ectodermal dysplasia
             1, anhidrotic and three CpG islands, complete sequence
          Length = 184181

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    gaggagagagaagggggaga 48
             ||||||||||||||||||||
Sbjct: 60965 gaggagagagaagggggaga 60984
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>gb|AC134327.2| Mus musculus BAC clone RP24-270O22 from 1, complete sequence
          Length = 152697

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gagagagaagggggagaagg 51
             ||||||||||||||||||||
Sbjct: 47964 gagagagaagggggagaagg 47983
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>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
            sequence
          Length = 165908

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 530  taaggtgaatgaaaagcatg 549
            ||||||||||||||||||||
Sbjct: 5584 taaggtgaatgaaaagcatg 5603


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,017,866
Number of Sequences: 3902068
Number of extensions: 5017866
Number of successful extensions: 109533
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108643
Number of HSP's gapped (non-prelim): 885
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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