ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1) 30 4.8

>TTBK2_HUMAN (Q6IQ55) Tau-tubulin kinase 2 (EC 2.7.11.1)|
          Length = 1244

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
 Frame = -1

Query: 565  PLLIKSYLELFSFCNYLGAXXXXXXXXXLEN*SILPAPLAEEGTLLP-------AHLGRR 407
            P L+K  +E   F ++LG           E  + +PAP  EE  L P       +HL R 
Sbjct: 976  PDLVKLLVEKRQFKSFLGDLSSASDKLLEEKLATVPAPFCEEEVLTPFSRLTVDSHLSRS 1035

Query: 406  RQD 398
             +D
Sbjct: 1036 AED 1038


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,093,083
Number of Sequences: 219361
Number of extensions: 434886
Number of successful extensions: 785
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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