ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 305 bits (154), Expect = 8e-80 Identities = 193/206 (93%) Strand = Plus / Plus Query: 314 cggctgccgcgacctctgctacgtgcactgccccagctgcaagctcgtctgcatgtgcga 373 ||||||||||||| | |||||||| |||||||||| |||||||||||||||| |||| || Sbjct: 231 cggctgccgcgacatgtgctacgttcactgccccacctgcaagctcgtctgcctgtgtga 290 Query: 374 actggccggcacggagtgctacgacccgcgcttcgtgggcggcgacggcaacaagttcct 433 ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 291 gctgaccggcacggagtgctacgacccgcggttcgtcggcggcgacggcaacaagttcct 350 Query: 434 gttccacggccgcagggacgccgacttctgcctgctctccgacgccaacctgcacatcaa 493 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gttccacgggcgcaaggacgccgacttctgcctgctctccgacgccaacctgcacatcaa 410 Query: 494 cgcgcacttcatcgggaagcgcaacg 519 ||||||||||||||| |||||||||| Sbjct: 411 cgcgcacttcatcggcaagcgcaacg 436 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 191 ggaccccaacgtggtccccgtctacatgagccccggggcgcagcccaccgtggtgagctg 250 ||||||||||||| ||||| ||||||||| |||||| || ||||||||||| |||||| Sbjct: 108 ggaccccaacgtgatccccatctacatgacccccggctcgtcgcccaccgtggcgagctg 167 Query: 251 ctacaaccaga 261 ||||||||||| Sbjct: 168 ctacaaccaga 178
>dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E01, full insert sequence Length = 1481 Score = 305 bits (154), Expect = 8e-80 Identities = 193/206 (93%) Strand = Plus / Plus Query: 314 cggctgccgcgacctctgctacgtgcactgccccagctgcaagctcgtctgcatgtgcga 373 ||||||||||||| | |||||||| |||||||||| |||||||||||||||| |||| || Sbjct: 316 cggctgccgcgacatgtgctacgttcactgccccacctgcaagctcgtctgcctgtgtga 375 Query: 374 actggccggcacggagtgctacgacccgcgcttcgtgggcggcgacggcaacaagttcct 433 ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 376 gctgaccggcacggagtgctacgacccgcggttcgtcggcggcgacggcaacaagttcct 435 Query: 434 gttccacggccgcagggacgccgacttctgcctgctctccgacgccaacctgcacatcaa 493 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gttccacgggcgcaaggacgccgacttctgcctgctctccgacgccaacctgcacatcaa 495 Query: 494 cgcgcacttcatcgggaagcgcaacg 519 ||||||||||||||| |||||||||| Sbjct: 496 cgcgcacttcatcggcaagcgcaacg 521 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 191 ggaccccaacgtggtccccgtctacatgagccccggggcgcagcccaccgtggtgagctg 250 ||||||||||||| ||||| ||||||||| |||||| || ||||||||||| |||||| Sbjct: 193 ggaccccaacgtgatccccatctacatgacccccggctcgtcgcccaccgtggcgagctg 252 Query: 251 ctacaaccaga 261 ||||||||||| Sbjct: 253 ctacaaccaga 263
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 240 bits (121), Expect = 4e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 379 ccggcacggagtgctacgacccgcgcttcgtgggcggcgacggcaacaagttcctgttcc 438 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20503 ccggcacggagtgctacgacccgcggttcgtcggcggcgacggcaacaagttcctgttcc 20562 Query: 439 acggccgcagggacgccgacttctgcctgctctccgacgccaacctgcacatcaacgcgc 498 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20563 acgggcgcaaggacgccgacttctgcctgctctccgacgccaacctgcacatcaacgcgc 20622 Query: 499 acttcatcgggaagcgcaacg 519 |||||||||| |||||||||| Sbjct: 20623 acttcatcggcaagcgcaacg 20643 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 191 ggaccccaacgtggtccccgtctacatgagccccggggcgcagcccaccgtggtgagctg 250 ||||||||||||| ||||| ||||||||| |||||| || ||||||||||| |||||| Sbjct: 20179 ggaccccaacgtgatccccatctacatgacccccggctcgtcgcccaccgtggcgagctg 20238 Query: 251 ctacaaccaga 261 ||||||||||| Sbjct: 20239 ctacaaccaga 20249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 314 cggctgccgcgacctctgctacgtgcactgccccagctgcaagctcgtctgc 365 ||||||||||||| | |||||||| |||||||||| |||||||||||||||| Sbjct: 20302 cggctgccgcgacatgtgctacgttcactgccccacctgcaagctcgtctgc 20353
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 240 bits (121), Expect = 4e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 379 ccggcacggagtgctacgacccgcgcttcgtgggcggcgacggcaacaagttcctgttcc 438 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20289870 ccggcacggagtgctacgacccgcggttcgtcggcggcgacggcaacaagttcctgttcc 20289929 Query: 439 acggccgcagggacgccgacttctgcctgctctccgacgccaacctgcacatcaacgcgc 498 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20289930 acgggcgcaaggacgccgacttctgcctgctctccgacgccaacctgcacatcaacgcgc 20289989 Query: 499 acttcatcgggaagcgcaacg 519 |||||||||| |||||||||| Sbjct: 20289990 acttcatcggcaagcgcaacg 20290010 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 191 ggaccccaacgtggtccccgtctacatgagccccggggcgcagcccaccgtggtgagctg 250 ||||||||||||| ||||| ||||||||| |||||| || ||||||||||| |||||| Sbjct: 20289546 ggaccccaacgtgatccccatctacatgacccccggctcgtcgcccaccgtggcgagctg 20289605 Query: 251 ctacaaccaga 261 ||||||||||| Sbjct: 20289606 ctacaaccaga 20289616 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 314 cggctgccgcgacctctgctacgtgcactgccccagctgcaagctcgtctgc 365 ||||||||||||| | |||||||| |||||||||| |||||||||||||||| Sbjct: 20289669 cggctgccgcgacatgtgctacgttcactgccccacctgcaagctcgtctgc 20289720
>gb|AF134579.1|AF134579 Zea mays clone AGPZm1 arabinogalactan protein (agp) mRNA, partial cds Length = 825 Score = 117 bits (59), Expect = 4e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 395 cgacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgc 454 ||||||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| Sbjct: 16 cgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgc 75 Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagc 513 |||||||||| ||||||||||| | |||| ||||||||||||||||||||||| |||| Sbjct: 76 cgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 134
>gb|AY111354.1| Zea mays CL1277_1 mRNA sequence Length = 1328 Score = 117 bits (59), Expect = 4e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 395 cgacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgc 454 ||||||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| Sbjct: 366 cgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgc 425 Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagc 513 |||||||||| ||||||||||| | |||| ||||||||||||||||||||||| |||| Sbjct: 426 cgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 484
>dbj|AB021176.1| Zea mays ZmRCP2 mRNA for root cap protein 2, complete cds Length = 1318 Score = 117 bits (59), Expect = 4e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 395 cgacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgc 454 ||||||||||||| | ||||||||||||||| ||| |||||||||||| ||||||| Sbjct: 366 cgacccgcgcttcatcggcggcgacggcaacgccttctacttccacggccgccgggacgc 425 Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagc 513 |||||||||| ||||||||||| | |||| ||||||||||||||||||||||| |||| Sbjct: 426 cgacttctgcgtgctctccgaccgcgacctccacatcaacgcgcacttcatcggcaagc 484
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 396 gacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgcc 455 |||||||| ||| | |||||||||||||||| |||| |||||||||||| | ||| | Sbjct: 137811 gacccgcggttcatcggcggcgacggcaacacgttctacttccacggccgccgtgaccgc 137870 Query: 456 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||||||||||||||||| |||||||||||||||| |||||| |||| Sbjct: 137871 gacttctgcctgctctccgacgcgaacctgcacatcaacggccacttcgtcgg 137923
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 396 gacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgcc 455 |||||||| ||| | |||||||||||||||| |||| |||||||||||| | ||| | Sbjct: 27262843 gacccgcggttcatcggcggcgacggcaacacgttctacttccacggccgccgtgaccgc 27262902 Query: 456 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||||||||||||||||| |||||||||||||||| |||||| |||| Sbjct: 27262903 gacttctgcctgctctccgacgcgaacctgcacatcaacggccacttcgtcgg 27262955 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||||| ||| Sbjct: 378411 ggcggcgacggcaacaacttctacttccacggcaagaaggaccgcgacttctgcctcctc 378470 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaacg 519 ||||||||| ||| ||| ||||||| ||||||||||| |||||||||| Sbjct: 378471 tccgacgccgccctccacgtcaacgcccacttcatcggcaagcgcaacg 378519
>ref|NM_189425.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 277 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 336 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 337 tccgacgccgacctgcacatcaacgcccacttcatcggcaagcgcaac 384
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 42697314 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 42697255 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 42697254 tccgacgccgacctgcacatcaacgcccacttcatcggcaagcgcaac 42697207 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 42699458 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 42699517 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 42699518 tccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaac 42699565 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagcg 514 |||||||||| | ||||||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct: 42693169 cgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcg 42693110 Query: 515 caac 518 |||| Sbjct: 42693109 caac 42693106 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 456 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||| | ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 42703655 gacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcgg 42703707
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 30079 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 30020 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||||||||||||||| ||||||||||| ||||||||| Sbjct: 30019 tccgacgccgacctgcacatcaacgcccacttcatcggcaagcgcaac 29972 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 32223 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 32282 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 32283 tccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaac 32330 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagcg 514 |||||||||| | ||||||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct: 25934 cgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcg 25875 Query: 515 caac 518 |||| Sbjct: 25874 caac 25871 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 456 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||| | ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 36420 gacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcgg 36472
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | || Sbjct: 138494 ggcggcgacggcaacgccttctacttccatggccggagggacgccgacttctgcgtcgtc 138553 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgc 515 |||||| | |||| ||||||||||||||||||||||| |||||| Sbjct: 138554 tccgaccgcgacctccacatcaacgcgcacttcatcggcaagcgc 138598
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | || Sbjct: 14637 ggcggcgacggcaacgccttctacttccatggccggagggacgccgacttctgcgtcgtc 14696 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgc 515 |||||| | |||| ||||||||||||||||||||||| |||||| Sbjct: 14697 tccgaccgcgacctccacatcaacgcgcacttcatcggcaagcgc 14741
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||||| ||| Sbjct: 40058 ggcggcgacggcaacaacttctacttccacggcaagaaggaccgcgacttctgcctcctc 40117 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaacg 519 ||||||||| ||| ||| ||||||| ||||||||||| |||||||||| Sbjct: 40118 tccgacgccgccctccacgtcaacgcccacttcatcggcaagcgcaacg 40166
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | || Sbjct: 2362495 ggcggcgacggcaacgccttctacttccatggccggagggacgccgacttctgcgtcgtc 2362554 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgc 515 |||||| | |||| ||||||||||||||||||||||| |||||| Sbjct: 2362555 tccgaccgcgacctccacatcaacgcgcacttcatcggcaagcgc 2362599
>dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E12, full insert sequence Length = 1747 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | || Sbjct: 1566 ggcggcgacggcaacgccttctacttccatggccggagggacgccgacttctgcgtcgtc 1507 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgc 515 |||||| | |||| ||||||||||||||||||||||| |||||| Sbjct: 1506 tccgaccgcgacctccacatcaacgcgcacttcatcggcaagcgc 1462
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | || Sbjct: 2370276 ggcggcgacggcaacgccttctacttccatggccggagggacgccgacttctgcgtcgtc 2370335 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgc 515 |||||| | |||| ||||||||||||||||||||||| |||||| Sbjct: 2370336 tccgaccgcgacctccacatcaacgcgcacttcatcggcaagcgc 2370380
>ref|NM_189426.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 319 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 378 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 379 tccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaac 426 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 tgccccagctgcaagctcgtctgcatgtgcga 373 ||||||||||||||| | ||||||||||||| Sbjct: 247 tgccccagctgcaagaccttctgcatgtgcga 278
>dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J03, full insert sequence Length = 1352 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 411 ggcggcgacggcaacaagttcctgttccacggccgcagggacgccgacttctgcctgctc 470 ||||||||||||||||| ||| ||||||||| | |||| |||||||||| | || Sbjct: 473 ggcggcgacggcaacaacttctacttccacggcaagaaggaccacgacttctgcatcgtc 532 Query: 471 tccgacgccaacctgcacatcaacgcgcacttcatcgggaagcgcaac 518 ||||||||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct: 533 tccgacgccgacctccacatcaacgcccacttcatcggcaagcgcaac 580 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 tgccccagctgcaagctcgtctgcatgtgcga 373 ||||||||||||||| | ||||||||||||| Sbjct: 401 tgccccagctgcaagaccttctgcatgtgcga 432
>ref|NM_189423.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagcg 514 |||||||||| | ||||||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct: 345 cgacttctgcatcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcg 404 Query: 515 caac 518 |||| Sbjct: 405 caac 408
>dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, complete cds Length = 1225 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 395 cgacccgcgcttcgtgggcggcgacggcaacaagttcctgttccacggccgcagggacgc 454 |||||| |||||| ||||| |||||||||||| ||| ||||||||| | |||| Sbjct: 333 cgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccg 392 Query: 455 cgacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgggaagcg 514 ||||||||| | ||||||||||| ||| ||||||||||||||||||||||| ||||| Sbjct: 393 ggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcg 452 Query: 515 caac 518 |||| Sbjct: 453 caac 456
>ref|NM_189428.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 456 gacttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||| | ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 391 gacttctgcatcgtctccgacgccgacctgcacatcaacgcccacttcatcgg 443
>dbj|AP004982.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04L20, TM0437a, complete sequence Length = 48314 Score = 48.1 bits (24), Expect = 0.030 Identities = 45/52 (86%) Strand = Plus / Minus Query: 457 acttctgcctgctctccgacgccaacctgcacatcaacgcgcacttcatcgg 508 ||||||||||| | |||||| | ||||| ||||| ||||| ||||||||||| Sbjct: 26074 acttctgcctggtatccgacccaaacctccacataaacgcacacttcatcgg 26023
>gb|AY325490.1| Cavia porcellus clone pGP3 5S ribosomal RNA gene, complete sequence Length = 605 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagcactccc 34 ||||||||||||||||||||| ||||| Sbjct: 472 cacgagccacgagccacgagccctccc 498 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 465 cacgagccacgagccacgagc 485 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 458 cacgagccacgagccacgagc 478 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 451 cacgagccacgagccacgagc 471 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 444 cacgagccacgagccacgagc 464
>gb|AY325489.1| Cavia porcellus clone pGP2 5S ribosomal RNA gene, complete sequence Length = 572 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagcactccc 34 ||||||||||||||||||||| ||||| Sbjct: 434 cacgagccacgagccacgagccctccc 460 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 427 cacgagccacgagccacgagc 447 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 420 cacgagccacgagccacgagc 440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 413 cacgagccacgagccacgagc 433 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 406 cacgagccacgagccacgagc 426
>gb|AY325488.1| Cavia porcellus clone pGP1 5S ribosomal RNA gene, complete sequence Length = 723 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagcactccc 34 ||||||||||||||||||||| ||||| Sbjct: 426 cacgagccacgagccacgagccctccc 452 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 419 cacgagccacgagccacgagc 439 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 412 cacgagccacgagccacgagc 432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 405 cacgagccacgagccacgagc 425
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 109 cgtgtgcggtggtgctgctcgcctgcgccgc 139 |||| ||||||| |||||||||||||||||| Sbjct: 2253964 cgtgcgcggtggggctgctcgcctgcgccgc 2253994 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ggtgctgctcgcctgcgccgccgc 142 ||||||||||||| |||||||||| Sbjct: 869274 ggtgctgctcgccagcgccgccgc 869251
>gb|M77176.1|HUMCAIIA01 H.sapiens carbonic anhydrase II (CAII) gene, exons 1 and 2 Length = 2925 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cccggtgcgccggtgccccgccggc 317 |||||||| |||||||||||||||| Sbjct: 1071 cccggtgccccggtgccccgccggc 1095
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 475 acgccaacctgcacatcaacgcgca 499 |||||||||||||||||||| |||| Sbjct: 1896235 acgccaacctgcacatcaacccgca 1896211
>gb|AY462218.1| Homo sapiens secretin receptor (SCTR) mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 45 ggtgctgctcgcctgcgccgc 65
>emb|AL080317.11|HSJ1112D6 Human DNA sequence from clone RP5-1112D6 on chromosome 6q21-22.2, complete sequence Length = 135305 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 accagagcagcccgtcgcaggcccc 280 ||||||||||||||| ||||||||| Sbjct: 33209 accagagcagcccgtagcaggcccc 33185
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 cggcgacggcaacaagttcct 433 ||||||||||||||||||||| Sbjct: 232196 cggcgacggcaacaagttcct 232176
>gb|BC035757.1| Homo sapiens secretin receptor, mRNA (cDNA clone MGC:46199 IMAGE:5763906), complete cds Length = 1905 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 310 ggtgctgctcgcctgcgccgc 330
>gb|AC013275.8| Homo sapiens BAC clone RP11-464C8 from 2, complete sequence Length = 174822 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 117486 ggtgctgctcgcctgcgccgc 117466
>emb|X59388.1|NCINSPS N.crassa preproinsulin-like pseudogene Length = 1339 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cacgagccacgagccacgagc 28 ||||||||||||||||||||| Sbjct: 840 cacgagccacgagccacgagc 820
>gb|U20178.1|HSU20178 Human secretin receptor precursor mRNA, complete cds Length = 1650 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 102 ggtgctgctcgcctgcgccgc 122
>ref|NM_002980.1| Homo sapiens secretin receptor (SCTR), mRNA Length = 1703 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 153 ggtgctgctcgcctgcgccgc 173
>gb|U28281.1|HSU28281 Human secretin receptor mRNA, complete cds Length = 1703 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 153 ggtgctgctcgcctgcgccgc 173
>gb|U13989.1|HSU13989 Human secretin receptor mRNA, complete cds Length = 1616 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 95 ggtgctgctcgcctgcgccgc 115
>emb|X03251.1|HSCAII Human gene fragment for carbonic anhydrase II (exons 1 and 2) Length = 2150 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cccggtgcgccggtgccccgccggc 317 |||||||| |||||||||||||||| Sbjct: 347 cccggtgccccggtgccccgccggc 371
>dbj|AB035747.1| Homo sapiens CAII gene, promoter, partial sequence Length = 1669 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cccggtgcgccggtgccccgccggc 317 |||||||| |||||||||||||||| Sbjct: 1386 cccggtgccccggtgccccgccggc 1410
>dbj|AB065660.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_223 Length = 84510 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ggtgctgctcgcctgcgccgc 139 ||||||||||||||||||||| Sbjct: 245 ggtgctgctcgcctgcgccgc 265
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tgatcgatggcgtctgtcca 103 |||||||||||||||||||| Sbjct: 1374775 tgatcgatggcgtctgtcca 1374756
>ref|XM_529713.1| PREDICTED: Pan troglodytes LOC453637 (LOC453637), mRNA Length = 857 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 340 cgtcgcaggccccagagtgc 359
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cgccggtgccccgccggctgccgc 323 |||||||||| ||||||||||||| Sbjct: 3478441 cgccggtgccgcgccggctgccgc 3478464
>ref|XM_479165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2360 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 116 ggtggtgctgctcgcctgcgccgccgcattcc 147 ||||||| |||||| | ||||||||||||||| Sbjct: 407 ggtggtggtgctcgtcggcgccgccgcattcc 376
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tcgtgggcggcgacggcaac 425 |||||||||||||||||||| Sbjct: 623936 tcgtgggcggcgacggcaac 623917
>ref|XM_426053.1| PREDICTED: Gallus gallus similar to arm-repeat protein NPRAP/neurojungin (LOC428498), partial mRNA Length = 581 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tgccccgccggctgccgcga 325 |||||||||||||||||||| Sbjct: 229 tgccccgccggctgccgcga 248
>ref|XM_653990.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1478.2), mRNA Length = 10023 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 cggaccccaacgtggtccccgtct 213 ||||||||||||| |||||||||| Sbjct: 8881 cggaccccaacgttgtccccgtct 8904
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gctgctcgcctgcgccgccg 141 |||||||||||||||||||| Sbjct: 3189383 gctgctcgcctgcgccgccg 3189402
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gctgctcgcctgcgccgccg 141 |||||||||||||||||||| Sbjct: 983023 gctgctcgcctgcgccgccg 983042
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 acgccaacctgcacatcaacgcgc 498 ||||||||||| |||||||||||| Sbjct: 608986 acgccaacctgaacatcaacgcgc 609009
>gb|AC010053.7| Drosophila melanogaster 3L BAC RP98-6H19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 128765 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 100714 gttcctgttccacggccgca 100733
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gtgtgcggtggtgctgctcg 129 |||||||||||||||||||| Sbjct: 299119 gtgtgcggtggtgctgctcg 299138
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 tgcgccggtgccccgccggctgcc 321 |||| ||||||||||||||||||| Sbjct: 143019 tgcggcggtgccccgccggctgcc 143042
>ref|NM_140240.1| Drosophila melanogaster CG6053-RA (CG6053), mRNA Length = 1753 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 1718 gttcctgttccacggccgca 1699
>ref|XM_943723.1| PREDICTED: Homo sapiens hypothetical protein LOC254559 (LOC254559), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 346 cgtcgcaggccccagagtgc 365
>ref|XM_931480.1| PREDICTED: Homo sapiens hypothetical protein LOC254559 (LOC254559), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 346 cgtcgcaggccccagagtgc 365
>gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA polymerase gamma (polg) gene, complete sequence Length = 170612 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 130839 cgtcgcaggccccagagtgc 130858
>gb|BT022804.1| Drosophila melanogaster IP13743 full insert cDNA Length = 1897 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 1710 gttcctgttccacggccgca 1691
>gb|BT022796.1| Drosophila melanogaster IP13643 full insert cDNA Length = 1893 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 1710 gttcctgttccacggccgca 1691
>gb|BT022764.1| Drosophila melanogaster IP13843 full insert cDNA Length = 1895 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 1710 gttcctgttccacggccgca 1691
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 116 ggtggtgctgctcgcctgcgccgccgcattcc 147 ||||||| |||||| | ||||||||||||||| Sbjct: 25344615 ggtggtggtgctcgtcggcgccgccgcattcc 25344646
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cggcaacaagttcctgttcc 438 |||||||||||||||||||| Sbjct: 1172247 cggcaacaagttcctgttcc 1172228
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 116 ggtggtgctgctcgcctgcgccgccgcattcc 147 ||||||| |||||| | ||||||||||||||| Sbjct: 37705 ggtggtggtgctcgtcggcgccgccgcattcc 37736
>dbj|AK067275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L18, full insert sequence Length = 2360 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 116 ggtggtgctgctcgcctgcgccgccgcattcc 147 ||||||| |||||| | ||||||||||||||| Sbjct: 407 ggtggtggtgctcgtcggcgccgccgcattcc 376
>gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41 of 83 of the complete sequence Length = 280378 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 gttcctgttccacggccgca 447 |||||||||||||||||||| Sbjct: 245649 gttcctgttccacggccgca 245668
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gagcagcccgtcgcaggccc 279 |||||||||||||||||||| Sbjct: 859099 gagcagcccgtcgcaggccc 859080
>emb|AL772352.8| Mouse DNA sequence from clone RP23-147F6 on chromosome 2, complete sequence Length = 204438 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ccagcagttaagatcaccag 69 |||||||||||||||||||| Sbjct: 102976 ccagcagttaagatcaccag 102995
>gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA polymerase gamma (polg) gene, complete sequence Length = 117270 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 74082 cgtcgcaggccccagagtgc 74101
>gb|AC133637.2| Homo sapiens chromosome 15, clone CTD-2335A18, complete sequence Length = 61736 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgtcgcaggccccagagtgc 287 |||||||||||||||||||| Sbjct: 17424 cgtcgcaggccccagagtgc 17405 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,981,204 Number of Sequences: 3902068 Number of extensions: 2981204 Number of successful extensions: 58273 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57054 Number of HSP's gapped (non-prelim): 1204 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
