ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30h10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Minus Query: 248 aagctgccggcgccggtggccgacgcgctggtgcactacgcggcatcgaacgtgacgccg 307 ||||| |||||| ||||||| | ||| |||||||||||||| | |||||||||||||| Sbjct: 5455509 aagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtgacgccg 5455450 Query: 308 cagcagacggcggcggagatcggggtgtcgctgcgcgtcctgcagcgccgctcgccctgc 367 ||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||| Sbjct: 5455449 cagcagacggcggcggagatcggggtgtcgctgcgggtgctgcagctgcgggcgccgtgc 5455390 Query: 368 aacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctcaaccacggc 427 ||||||||||||||||| || || || |||||| | |||||||||||||||||||||||| Sbjct: 5455389 aacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaaccacggc 5455330 Query: 428 ggccgcacggtgttcctcgaggaggacgcgtcgtggatcgcctccgtccgctccaagcac 487 |||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 5455329 ggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcctccgtcaaggcgggccac 5455270 Query: 488 ccggggctcgagtcctaccacgtcgtgtacgacacccgcgtcaccgaggccgacgacctc 547 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| Sbjct: 5455269 ccggggctcgagtcctaccacgtcgcctacgacacccgcgtcaccgacgccgatgagctc 5455210 Query: 548 atgtccctccg 558 || ||||||| Sbjct: 5455209 atcgccctccg 5455199 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggac 454 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 5488527 gcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 5488568 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 36 ccatgtcgagccccgtgcacgcccggaaggccctccacctattctccatgaaggccaagc 95 |||||||||||||| |||| | || ||||| ||||| | |||||||||||||||||| Sbjct: 5455712 ccatgtcgagccccatgcatgttcgcaaggcgatccacttcgtctccatgaaggccaagc 5455653 Query: 96 tgcagagct 104 | ||||||| Sbjct: 5455652 tccagagct 5455644 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 250 gctgccggcgccggtggccgacgcgctggtgcactacgcg 289 ||||||| || ||||||| || |||||||||||||||||| Sbjct: 5488447 gctgccgtcggcggtggcggaggcgctggtgcactacgcg 5488486
>dbj|AK069867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F14, full insert sequence Length = 1521 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Plus Query: 248 aagctgccggcgccggtggccgacgcgctggtgcactacgcggcatcgaacgtgacgccg 307 ||||| |||||| ||||||| | ||| |||||||||||||| | |||||||||||||| Sbjct: 320 aagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtgacgccg 379 Query: 308 cagcagacggcggcggagatcggggtgtcgctgcgcgtcctgcagcgccgctcgccctgc 367 ||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||| Sbjct: 380 cagcagacggcggcggagatcggggtgtcgctgcgggtgctgcagctgcgggcgccgtgc 439 Query: 368 aacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctcaaccacggc 427 ||||||||||||||||| || || || |||||| | |||||||||||||||||||||||| Sbjct: 440 aacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaaccacggc 499 Query: 428 ggccgcacggtgttcctcgaggaggacgcgtcgtggatcgcctccgtccgctccaagcac 487 |||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 500 ggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcctccgtcaaagcgggccac 559 Query: 488 ccggggctcgagtcctaccacgtcgtgtacgacacccgcgtcaccgaggccgacgacctc 547 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| Sbjct: 560 ccggggctcgagtcctaccacgtcgcctacgacacccgcgtcaccgacgccgatgagctc 619 Query: 548 atgtccctccg 558 || ||||||| Sbjct: 620 atcgccctccg 630 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 36 ccatgtcgagccccgtgcacgcccggaaggccctccacctattctccatgaaggccaagc 95 |||||||||||||| |||| | || ||||| ||||| | |||||||||||||||||| Sbjct: 117 ccatgtcgagccccatgcatgttcgcaaggcgatccacttcgtctccatgaaggccaagc 176 Query: 96 tgcagagct 104 | ||||||| Sbjct: 177 tccagagct 185
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Minus Query: 248 aagctgccggcgccggtggccgacgcgctggtgcactacgcggcatcgaacgtgacgccg 307 ||||| |||||| ||||||| | ||| |||||||||||||| | |||||||||||||| Sbjct: 5455498 aagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtgacgccg 5455439 Query: 308 cagcagacggcggcggagatcggggtgtcgctgcgcgtcctgcagcgccgctcgccctgc 367 ||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||| Sbjct: 5455438 cagcagacggcggcggagatcggggtgtcgctgcgggtgctgcagctgcgggcgccgtgc 5455379 Query: 368 aacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctcaaccacggc 427 ||||||||||||||||| || || || |||||| | |||||||||||||||||||||||| Sbjct: 5455378 aacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaaccacggc 5455319 Query: 428 ggccgcacggtgttcctcgaggaggacgcgtcgtggatcgcctccgtccgctccaagcac 487 |||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 5455318 ggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcctccgtcaaggcgggccac 5455259 Query: 488 ccggggctcgagtcctaccacgtcgtgtacgacacccgcgtcaccgaggccgacgacctc 547 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| Sbjct: 5455258 ccggggctcgagtcctaccacgtcgcctacgacacccgcgtcaccgacgccgatgagctc 5455199 Query: 548 atgtccctccg 558 || ||||||| Sbjct: 5455198 atcgccctccg 5455188 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggac 454 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 5488516 gcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 5488557 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 36 ccatgtcgagccccgtgcacgcccggaaggccctccacctattctccatgaaggccaagc 95 |||||||||||||| |||| | || ||||| ||||| | |||||||||||||||||| Sbjct: 5455701 ccatgtcgagccccatgcatgttcgcaaggcgatccacttcgtctccatgaaggccaagc 5455642 Query: 96 tgcagagct 104 | ||||||| Sbjct: 5455641 tccagagct 5455633 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 250 gctgccggcgccggtggccgacgcgctggtgcactacgcg 289 ||||||| || ||||||| || |||||||||||||||||| Sbjct: 5488436 gctgccgtcggcggtggcggaggcgctggtgcactacgcg 5488475
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Plus Query: 248 aagctgccggcgccggtggccgacgcgctggtgcactacgcggcatcgaacgtgacgccg 307 ||||| |||||| ||||||| | ||| |||||||||||||| | |||||||||||||| Sbjct: 10299 aagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtgacgccg 10358 Query: 308 cagcagacggcggcggagatcggggtgtcgctgcgcgtcctgcagcgccgctcgccctgc 367 ||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||| Sbjct: 10359 cagcagacggcggcggagatcggggtgtcgctgcgggtgctgcagctgcgggcgccgtgc 10418 Query: 368 aacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctcaaccacggc 427 ||||||||||||||||| || || || |||||| | |||||||||||||||||||||||| Sbjct: 10419 aacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaaccacggc 10478 Query: 428 ggccgcacggtgttcctcgaggaggacgcgtcgtggatcgcctccgtccgctccaagcac 487 |||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 10479 ggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcctccgtcaaggcgggccac 10538 Query: 488 ccggggctcgagtcctaccacgtcgtgtacgacacccgcgtcaccgaggccgacgacctc 547 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| Sbjct: 10539 ccggggctcgagtcctaccacgtcgcctacgacacccgcgtcaccgacgccgatgagctc 10598 Query: 548 atgtccctccg 558 || ||||||| Sbjct: 10599 atcgccctccg 10609 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 36 ccatgtcgagccccgtgcacgcccggaaggccctccacctattctccatgaaggccaagc 95 |||||||||||||| |||| | || ||||| ||||| | |||||||||||||||||| Sbjct: 10096 ccatgtcgagccccatgcatgttcgcaaggcgatccacttcgtctccatgaaggccaagc 10155 Query: 96 tgcagagct 104 | ||||||| Sbjct: 10156 tccagagct 10164
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 307 bits (155), Expect = 2e-80 Identities = 272/311 (87%) Strand = Plus / Minus Query: 248 aagctgccggcgccggtggccgacgcgctggtgcactacgcggcatcgaacgtgacgccg 307 ||||| |||||| ||||||| | ||| |||||||||||||| | |||||||||||||| Sbjct: 8314 aagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtgacgccg 8255 Query: 308 cagcagacggcggcggagatcggggtgtcgctgcgcgtcctgcagcgccgctcgccctgc 367 ||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||| Sbjct: 8254 cagcagacggcggcggagatcggggtgtcgctgcgggtgctgcagctgcgggcgccgtgc 8195 Query: 368 aacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctcaaccacggc 427 ||||||||||||||||| || || || |||||| | |||||||||||||||||||||||| Sbjct: 8194 aacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaaccacggc 8135 Query: 428 ggccgcacggtgttcctcgaggaggacgcgtcgtggatcgcctccgtccgctccaagcac 487 |||||||| ||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 8134 ggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcctccgtcaaggcgggccac 8075 Query: 488 ccggggctcgagtcctaccacgtcgtgtacgacacccgcgtcaccgaggccgacgacctc 547 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| Sbjct: 8074 ccggggctcgagtcctaccacgtcgcctacgacacccgcgtcaccgacgccgatgagctc 8015 Query: 548 atgtccctccg 558 || ||||||| Sbjct: 8014 atcgccctccg 8004 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggac 454 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 41332 gcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 41373 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 36 ccatgtcgagccccgtgcacgcccggaaggccctccacctattctccatgaaggccaagc 95 |||||||||||||| |||| | || ||||| ||||| | |||||||||||||||||| Sbjct: 8517 ccatgtcgagccccatgcatgttcgcaaggcgatccacttcgtctccatgaaggccaagc 8458 Query: 96 tgcagagct 104 | ||||||| Sbjct: 8457 tccagagct 8449 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 250 gctgccggcgccggtggccgacgcgctggtgcactacgcg 289 ||||||| || ||||||| || |||||||||||||||||| Sbjct: 41252 gctgccgtcggcggtggcggaggcgctggtgcactacgcg 41291
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 407 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 455 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30188 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 30140
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 407 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 455 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7571102 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 7571054 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggacgcgtc 459 |||||||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 16690921 gcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtc 16690967
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 407 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 455 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7641189 tgggcggcgctcaaccacggcggccgcacggtgttcctcgaggaggacg 7641141 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggacgcgtc 459 |||||||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 16784744 gcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtc 16784790
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 360 cgccctgcaacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctca 419 |||| |||||||||||||||||||||||||| ||| | ||| ||||| |||||||| Sbjct: 28296415 cgccgtgcaacttcctggtgttcgggctcggcggggagacgccgctgtggcgggcgctca 28296474 Query: 420 accacggcggccgcacggtgttcctcga 447 |||||||||||||||| ||||||||||| Sbjct: 28296475 accacggcggccgcaccgtgttcctcga 28296502
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 360 cgccctgcaacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctca 419 |||| |||||||||||||||||||||||||| ||| | ||| ||||| |||||||| Sbjct: 8993 cgccgtgcaacttcctggtgttcgggctcggcggggagacgccgctgtggcgggcgctca 9052 Query: 420 accacggcggccgcacggtgttcctcga 447 |||||||||||||||| ||||||||||| Sbjct: 9053 accacggcggccgcaccgtgttcctcga 9080
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 360 cgccctgcaacttcctggtgttcgggctcgggctggacagcccgatgtgggcggcgctca 419 |||| |||||||||||||||||||||||||| ||| | ||| ||||| |||||||| Sbjct: 94444 cgccgtgcaacttcctggtgttcgggctcggcggggagacgccgctgtggcgggcgctca 94503 Query: 420 accacggcggccgcacggtgttcctcga 447 |||||||||||||||| ||||||||||| Sbjct: 94504 accacggcggccgcaccgtgttcctcga 94531
>ref|XM_474130.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 412 ggcgctcaaccacggcggccgcacggtgttcctcgaggag 451 |||||||||||||||||||||||| || |||||||||||| Sbjct: 384 ggcgctcaaccacggcggccgcaccgtcttcctcgaggag 423
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 412 ggcgctcaaccacggcggccgcacggtgttcctcgaggag 451 |||||||||||||||||||||||| || |||||||||||| Sbjct: 33152835 ggcgctcaaccacggcggccgcaccgtcttcctcgaggag 33152874 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 516 acgacacccgcgtcaccgaggcc 538 ||||||||||||||||||||||| Sbjct: 25620554 acgacacccgcgtcaccgaggcc 25620532
>dbj|AK061488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A09, full insert sequence Length = 1329 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 412 ggcgctcaaccacggcggccgcacggtgttcctcgaggag 451 |||||||||||||||||||||||| || |||||||||||| Sbjct: 570 ggcgctcaaccacggcggccgcaccgtcttcctcgaggag 609
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 412 ggcgctcaaccacggcggccgcacggtgttcctcgaggag 451 |||||||||||||||||||||||| || |||||||||||| Sbjct: 43259 ggcgctcaaccacggcggccgcaccgtcttcctcgaggag 43298
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 412 ggcgctcaaccacggcggccgcacggtgttcctcgaggag 451 |||||||||||||||||||||||| || |||||||||||| Sbjct: 35485 ggcgctcaaccacggcggccgcaccgtcttcctcgaggag 35524
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggac 454 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 109650 gcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 109609 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 250 gctgccggcgccggtggccgacgcgctggtgcactacgcg 289 ||||||| || ||||||| || |||||||||||||||||| Sbjct: 109730 gctgccgtcggcggtggcggaggcgctggtgcactacgcg 109691
>gb|AE005928.1| Caulobacter crescentus CB15 section 254 of 359 of the complete genome Length = 10813 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 212 ctgcgcggcggcgcgggcgacgacg 236 ||||||||||||||||||||||||| Sbjct: 10568 ctgcgcggcggcgcgggcgacgacg 10544 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggcggcgcgggcgacgacg 236 |||||||||||||||||||| Sbjct: 10161 cggcggcgcgggcgacgacg 10142
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 259 gccggtggccgacgcgctggtgc 281 ||||||||||||||||||||||| Sbjct: 2066499 gccggtggccgacgcgctggtgc 2066477
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggacgcgtc 459 |||||||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 72035 gcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtc 72081
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggacgcgtc 459 |||||||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 6536 gcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtc 6582
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 cgcggcggcgcgggcgacgacgg 237 ||||||||||||||||||||||| Sbjct: 122129 cgcggcggcgcgggcgacgacgg 122151
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 cgcggcggcgcgggcgacgacgg 237 ||||||||||||||||||||||| Sbjct: 158053 cgcggcggcgcgggcgacgacgg 158031
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 cgcggcggcgcgggcgacgacgg 237 ||||||||||||||||||||||| Sbjct: 14236 cgcggcggcgcgggcgacgacgg 14258
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 516 acgacacccgcgtcaccgaggcc 538 ||||||||||||||||||||||| Sbjct: 281 acgacacccgcgtcaccgaggcc 259
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 516 acgacacccgcgtcaccgaggcc 538 ||||||||||||||||||||||| Sbjct: 106752 acgacacccgcgtcaccgaggcc 106730
>dbj|AK108872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C10, full insert sequence Length = 1378 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 413 gcgctcaaccacggcggccgcacggtgttcctcgaggaggacgcgtc 459 |||||||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 423 gcgctcaacccgggcggcgccaccgtgttcctcgaggaggacccgtc 469
>ref|NM_186006.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 cggcggccgcacggtgttcctcgaggagga 453 ||||||||||| ||||||| |||||||||| Sbjct: 661 cggcggccgcaaggtgttcgtcgaggagga 690
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 cggcggccgcacggtgttcctcgaggagga 453 ||||||||||| ||||||| |||||||||| Sbjct: 27760977 cggcggccgcaaggtgttcgtcgaggagga 27760948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 26770448 gcgcggcggcgcgggcgacga 26770468
>gb|AF291747.1|AF291747 Gallus gallus zinc-finger transcription factor KROX20 (KROX20) gene, complete cds Length = 3495 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 191 cccggccccgccgcctcgcacctgcgcggc 220 ||||||| ||||||| |||||||||||||| Sbjct: 224 cccggcctcgccgccccgcacctgcgcggc 195
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 cggcggccgcacggtgttcctcgaggagga 453 ||||||||||| ||||||| |||||||||| Sbjct: 53356 cggcggccgcaaggtgttcgtcgaggagga 53327
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 cggcggccgcacggtgttcctcgaggagga 453 ||||||||||| ||||||| |||||||||| Sbjct: 140079 cggcggccgcaaggtgttcgtcgaggagga 140050
>dbj|AK072753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143D12, full insert sequence Length = 786 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 cgctgcgcgtcctgcagcgccg 357 |||||||||||||||||||||| Sbjct: 415 cgctgcgcgtcctgcagcgccg 394
>dbj|AK060696.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D09, full insert sequence Length = 1051 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 cggcggccgcacggtgttcctcgaggagga 453 ||||||||||| ||||||| |||||||||| Sbjct: 661 cggcggccgcaaggtgttcgtcgaggagga 690
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gcgccggtggccgacgcgctg 277 ||||||||||||||||||||| Sbjct: 563213 gcgccggtggccgacgcgctg 563233
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 ccggtggccgacgcgctggtg 280 ||||||||||||||||||||| Sbjct: 2755097 ccggtggccgacgcgctggtg 2755117
>ref|XM_479318.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 232 gcgcggcggcgcgggcgacga 212
>ref|XM_506511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1458_B07.103 mRNA Length = 3057 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 234 gcgcggcggcgcgggcgacga 214
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcggcggcgcgggcgacgacg 236 ||||||||||||||||||||| Sbjct: 3496299 gcggcggcgcgggcgacgacg 3496279
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cggtggccgacgcgctggtgc 281 ||||||||||||||||||||| Sbjct: 3141 cggtggccgacgcgctggtgc 3161
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 gcgtcaccgaggccgacgacc 545 ||||||||||||||||||||| Sbjct: 2612784 gcgtcaccgaggccgacgacc 2612764 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 ctgcgcggcggcgcgggcgacgac 235 ||||||||||||||||| |||||| Sbjct: 66151 ctgcgcggcggcgcgggagacgac 66128
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcggcggcgcgggcgacgacg 236 ||||||||||||||||||||| Sbjct: 532547 gcggcggcgcgggcgacgacg 532527
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcggcggcgcgggcgacgacg 236 ||||||||||||||||||||| Sbjct: 341203 gcggcggcgcgggcgacgacg 341183
>gb|AF348165.2|AF348165 Pseudomonas xiamenensis putative transcription regulator pTR, NADH dehydrogenase, and phosphoglycolate phosphatase genes, complete cds Length = 4177 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 gcgtcaccgaggccgacgacc 545 ||||||||||||||||||||| Sbjct: 3428 gcgtcaccgaggccgacgacc 3448
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 117305 gcgcggcggcgcgggcgacga 117325
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 16622 gcgcggcggcgcgggcgacga 16642
>dbj|AK101483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F21, full insert sequence Length = 2990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 232 gcgcggcggcgcgggcgacga 212
>dbj|AK066726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K22, full insert sequence Length = 3056 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcgcggcggcgcgggcgacga 234 ||||||||||||||||||||| Sbjct: 233 gcgcggcggcgcgggcgacga 213
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ccgacgcgctggtgcactacg 287 ||||||||||||||||||||| Sbjct: 2222964 ccgacgcgctggtgcactacg 2222944
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 gacgccgcagcagacggcggcggagatc 328 ||||||||||||| ||||||||| |||| Sbjct: 110317 gacgccgcagcaggcggcggcggcgatc 110344
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 3352133 gccggtggccgacgcgctgg 3352152
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gaaggccaagctgcagagct 104 |||||||||||||||||||| Sbjct: 1935362 gaaggccaagctgcagagct 1935343
>ref|XM_608750.2| PREDICTED: Bos taurus similar to Splicing factor, arginine/serine-rich 15 (CTD-binding SR-like protein RA4) (LOC530282), mRNA Length = 5901 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccatgaaggccaagctgcagag 102 ||||| |||||||||||||||||| Sbjct: 4086 ctccaagaaggccaagctgcagag 4109
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgcacctgcgcggcggcgcg 226 |||||||||||||||||||| Sbjct: 2835812 cgcacctgcgcggcggcgcg 2835793
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 516 acgacacccgcgtcaccgaggccgacga 543 |||||| |||||||||||| |||||||| Sbjct: 924192 acgacagccgcgtcaccgacgccgacga 924165
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cctgcgcggcggcgcgggcg 230 |||||||||||||||||||| Sbjct: 365199 cctgcgcggcggcgcgggcg 365180
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 238720 gccggtggccgacgcgctgg 238739
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 189372 gccggtggccgacgcgctgg 189391
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcgctggtgcactacgcggc 291 |||||||||||||||||||| Sbjct: 139534 gcgctggtgcactacgcggc 139553
>emb|AJ233397.3|PPU233397 Pseudomonas putida P1 alkane degradation genes (alkBFGHJKL and alkST) and flanking DNA Length = 23312 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gcggagatcggggtgtcgctgcgc 343 |||||||||||| ||||||||||| Sbjct: 21434 gcggagatcgggctgtcgctgcgc 21457 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gcggagatcggggtgtcgctgcgc 343 |||||||||||| ||||||||||| Sbjct: 1536 gcggagatcgggctgtcgctgcgc 1559
>emb|AJ719765.1| Gallus gallus mRNA for hypothetical protein, clone 6d21 Length = 4097 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccatgaaggccaagctgc 98 |||||||||||||||||||| Sbjct: 1368 ctccatgaaggccaagctgc 1387
>ref|NM_001012776.1| Gallus gallus WD repeat domain 59 (WDR59), mRNA Length = 4097 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccatgaaggccaagctgc 98 |||||||||||||||||||| Sbjct: 1368 ctccatgaaggccaagctgc 1387
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 gcggcgctcaaccacggcggccgc 433 ||||||||| |||||||||||||| Sbjct: 53968 gcggcgctcgaccacggcggccgc 53991
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 2801347 gccggtggccgacgcgctgg 2801366
>emb|CR407113.1| Gallus gallus finished cDNA, clone ChEST753g13 Length = 1121 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccatgaaggccaagctgc 98 |||||||||||||||||||| Sbjct: 305 ctccatgaaggccaagctgc 324
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 acgccgcagcagacggcggcggagatcg 329 |||||||||| | ||||||||||||||| Sbjct: 4924095 acgccgcagcggccggcggcggagatcg 4924068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cggcggcgcgggcgacgacg 236 |||||||||||||||||||| Sbjct: 917974 cggcggcgcgggcgacgacg 917993 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 ctgccggcgccggtggccgacgcgctgg 278 ||||||||| |||||||||||| ||||| Sbjct: 227738 ctgccggcggcggtggccgacgtgctgg 227765
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cgacgcgctggtgcactacgcggc 291 ||||||||||||||| |||||||| Sbjct: 3189568 cgacgcgctggtgcagtacgcggc 3189545 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 413 gcgctcaaccacggcggccgcacggtgttcct 444 ||||| ||||||||||| || ||||||||||| Sbjct: 3189414 gcgctgaaccacggcgggcggacggtgttcct 3189383
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cctgcgcggcggcgcgggcg 230 |||||||||||||||||||| Sbjct: 2401617 cctgcgcggcggcgcgggcg 2401598 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 1416856 gccggtggccgacgcgctgg 1416875
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cgccgcctcgcacctgcgcg 218 |||||||||||||||||||| Sbjct: 4441950 cgccgcctcgcacctgcgcg 4441931 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gcggcggcgcgggcgacgac 235 |||||||||||||||||||| Sbjct: 2694046 gcggcggcgcgggcgacgac 2694065
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cgacgcgctggtgcactacgcggc 291 ||||||||||||||| |||||||| Sbjct: 117722 cgacgcgctggtgcagtacgcggc 117699 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 413 gcgctcaaccacggcggccgcacggtgttcct 444 ||||| ||||||||||| || ||||||||||| Sbjct: 117568 gcgctgaaccacggcgggcggacggtgttcct 117537
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 cgacgcgctggtgcactacgcggc 291 ||||||||||||||| |||||||| Sbjct: 61755 cgacgcgctggtgcagtacgcggc 61732 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 413 gcgctcaaccacggcggccgcacggtgttcct 444 ||||| ||||||||||| || ||||||||||| Sbjct: 61601 gcgctgaaccacggcgggcggacggtgttcct 61570
>gb|AC114558.18| Mus musculus chromosome 8, clone RP23-47G19, complete sequence Length = 262311 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catgaaggccaagctgcaga 101 |||||||||||||||||||| Sbjct: 254045 catgaaggccaagctgcaga 254026
>ref|XM_320295.2| Anopheles gambiae str. PEST ENSANGP00000016587 (ENSANGG00000014098), partial mRNA Length = 669 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 339 gccggtggccgacgcgctgg 358
>emb|AJ438318.1|TAE438318 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt2i2c Length = 313 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cggcggcggagatcggggtg 334 |||||||||||||||||||| Sbjct: 218 cggcggcggagatcggggtg 199
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gccggtggccgacgcgctgg 278 |||||||||||||||||||| Sbjct: 2824169 gccggtggccgacgcgctgg 2824188
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 aacttcctggtgttcgggctcggg 391 ||||||||| |||||||||||||| Sbjct: 2153293 aacttcctgctgttcgggctcggg 2153316
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgtgacgccgcagcagacg 316 |||||||||||||||||||| Sbjct: 4233545 acgtgacgccgcagcagacg 4233526 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcggcgcgggcgacgacgg 237 |||||||||||||||||||| Sbjct: 549481 ggcggcgcgggcgacgacgg 549500 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcggcgcgggcgacgacgg 237 |||||||||||||||||||| Sbjct: 548788 ggcggcgcgggcgacgacgg 548807 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcggcgcgggcgacgacgg 237 |||||||||||||||||||| Sbjct: 548095 ggcggcgcgggcgacgacgg 548114
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cagacggcggcggagatcgg 330 |||||||||||||||||||| Sbjct: 1295033 cagacggcggcggagatcgg 1295052
>dbj|AP006660.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16J06, TM0346, complete sequence Length = 107098 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgccggcgccggtggccga 270 |||||||||||||||||||| Sbjct: 55089 ctgccggcgccggtggccga 55070
>gb|U46937.1|MPU46937 Mycobacterium phage DS6A, NheI D fragment sequence Length = 6611 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cgcggcggcgcgggcgacgacggg 238 ||||||||||||||||| |||||| Sbjct: 1627 cgcggcggcgcgggcgatgacggg 1604
>gb|L23173.1|STMAMPEPG Streptomyces lividans intracellular aminopeptidase G gene, partial CDS Length = 218 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcgctggtgcactacgcggc 291 |||||||||||||||||||| Sbjct: 31 gcgctggtgcactacgcggc 50 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,741,050 Number of Sequences: 3902068 Number of extensions: 2741050 Number of successful extensions: 83011 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77303 Number of HSP's gapped (non-prelim): 5700 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
