ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480121.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 389 bits (196), Expect = e-105 Identities = 295/328 (89%) Strand = Plus / Plus Query: 245 ccggggacgctggaggcgcgggcgacgggtacctctccgacggcggccttttgcagtcgg 304 |||||||||| || || ||||||||||||||||||||||||| || || ||| ||| Sbjct: 191 ccggggacgccgggggatcgggcgacgggtacctctccgacggtgggctgctgctgtcct 250 Query: 305 ccggcaagcggcggagggcgcaggagaggaagaaagctgtcccttggactgaagaagagc 364 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ccggcaagcggcggcgcgcgcaggagaggaagaaagctgtcccttggactgaagaagagc 310 Query: 365 ataggacatttcttgctggtctcgaaaagctggggaagggagactggaggggtatagcaa 424 | | ||||||||||||||||| |||||||| || ||||| ||||||||||||||| | | Sbjct: 311 accgaacatttcttgctggtcttgaaaagctaggaaagggggactggaggggtatatcta 370 Query: 425 aaaattttgttactaccaggactccaactcaagtggccagccatgctcagaaatattttc 484 | || |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 371 agaactttgttactaccaggactccaactcaagtggctagtcatgctcagaaatattttc 430 Query: 485 tcagacaaactaatccaaacaagaagaagcgcaggtctagcctttttgatatgatggcaa 544 | |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 431 ttagacaaactaatccaaacaagaagaagcgcagatcaagcctttttgatatgatggcaa 490 Query: 545 gcgatttgtcaccagcaccaaattgccc 572 ||| |||||||||||||||| ||||| Sbjct: 491 ctgatatgtcaccagcaccaaactgccc 518 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 177 gagggaggacgtgatgcgcaagtgcaagagcatgggcaacctggccgcc 225 ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 102 gagggaggacgcgatgcgcaagtgcaagagcatgggcaacctcgccgcc 150 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 79 atgcgcctcttcggcgtcaccattgcgccggcgccggcgccgc 121 ||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 1 atgcgcctcttcggcgtcaccatctcgccgccgccgccgccgc 43
>gb|AY108954.1| Zea mays PCO136991 mRNA sequence Length = 633 Score = 295 bits (149), Expect = 8e-77 Identities = 278/319 (87%), Gaps = 4/319 (1%) Strand = Plus / Plus Query: 265 ggcgacgggtacctctccgacggcggccttttgcagtcggccggcaagcggcggagggcg 324 |||||||||||||||||||| ||||| | |||||||| ||| ||||||||||||||| Sbjct: 268 ggcgacgggtacctctccgatggcgggttgatgcagtcgtgcggaaagcggcggagggcg 327 Query: 325 caggagaggaagaaagctgtcccttggactgaagaagagcataggacatttcttgctggt 384 |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 328 caggagaggaagaaagctgttccttggactgaagaggagcatagaacatttcttgctggt 387 Query: 385 ctcgaaaagctggggaagggagactggaggggtatagcaaaaaattttgttactaccagg 444 || |||||||| ||||||||||| ||| ||||||||||| |||| |||||||| ||||| Sbjct: 388 cttgaaaagctagggaagggagattggtggggtatagcacaaaa-tttgttaccaccaga 446 Query: 445 actccaactcaagtggccagccatgctcagaaatattttctcagacaaactaatccaaac 504 || ||||||||||| || || |||||||||||||||||||| ||||||||||||| | Sbjct: 447 acaccaactcaagttgcaagtcatgctcagaaatattttcttagacaaactaatcta--- 503 Query: 505 aagaagaagcgcaggtctagcctttttgatatgatggcaagcgatttgtcaccagcacca 564 || ||||||||||| ||||| |||||||| |||||| | || || |||||||| ||||| Sbjct: 504 aataagaagcgcagatctagtctttttgacatgatgcccagagagctgtcaccaacacca 563 Query: 565 aattgccccatcttaccac 583 || |||||| | ||||||| Sbjct: 564 aactgccccgtattaccac 582 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 149 atccgagccccaacccaccggtggcggtgagggaggacgtgatgcgcaagtgcaagagca 208 ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct: 140 atccgagccccaacccacccgtggctgccagggaggacgtgatgcgcaagtgcaagagca 199 Query: 209 tgggcaacctggccgccct 227 |||||||||| || ||||| Sbjct: 200 tgggcaacctcgcggccct 218 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 27 ccactcgtcggagccgg-ccgccgggatgcctcaagattcgcgcccgccagggatgcgcc 85 ||||||| ||||||| | ||||||||||||||| ||||| ||| || | |||||||||| Sbjct: 29 ccactcgccggagcccgaccgccgggatgcctcgagatttgcgaccagccgggatgcgcc 88 Query: 86 tcttcggcgtcaccattgcgccgg 109 | |||||||||||||| ||||||| Sbjct: 89 tgttcggcgtcaccatcgcgccgg 112
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 281 bits (142), Expect = 1e-72 Identities = 190/206 (92%) Strand = Plus / Plus Query: 339 agctgtcccttggactgaagaagagcataggacatttcttgctggtctcgaaaagctggg 398 ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| || Sbjct: 2931528 agctgtcccttggactgaagaagagcaccgaacatttcttgctggtcttgaaaagctagg 2931587 Query: 399 gaagggagactggaggggtatagcaaaaaattttgttactaccaggactccaactcaagt 458 ||||| ||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 2931588 aaagggggactggaggggtatatctaagaactttgttactaccaggactccaactcaagt 2931647 Query: 459 ggccagccatgctcagaaatattttctcagacaaactaatccaaacaagaagaagcgcag 518 ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2931648 ggctagtcatgctcagaaatattttcttagacaaactaatccaaacaagaagaagcgcag 2931707 Query: 519 gtctagcctttttgatatgatggcaa 544 || |||||||||||||||||||||| Sbjct: 2931708 atcaagcctttttgatatgatggcaa 2931733 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 245 ccggggacgctggaggcgcgggcgacgggtacctctccgacggcggccttttgcagtcgg 304 |||||||||| || || ||||||||||||||||||||||||| || || ||| ||| Sbjct: 2928726 ccggggacgccgggggatcgggcgacgggtacctctccgacggtgggctgctgctgtcct 2928785 Query: 305 ccggcaagcggcggagggcgcaggagaggaagaaag 340 |||||||||||||| | ||||||||||||||||||| Sbjct: 2928786 ccggcaagcggcggcgcgcgcaggagaggaagaaag 2928821 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 177 gagggaggacgtgatgcgcaagtgcaagagcatgggcaacctggccgcc 225 ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 2928637 gagggaggacgcgatgcgcaagtgcaagagcatgggcaacctcgccgcc 2928685 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 13 aaaacgccaccgccccactc-gtcggagc--cggccgccgggat--gcctcaagattcgc 67 ||||||||||||||| || | |||||||| |||||| |||||| |||||||||||||| Sbjct: 2928465 aaaacgccaccgcccaaccccgtcggagcggcggccgtcgggatatgcctcaagattcgc 2928524 Query: 68 gcccgccagggatgcgcctcttcggcgtcaccattgcgccggcgccggcgccgc 121 |||| | | |||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 2928525 gccccgccgcgatgcgcctcttcggcgtcaccatctcgccgccgccgccgccgc 2928578
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 281 bits (142), Expect = 1e-72 Identities = 190/206 (92%) Strand = Plus / Plus Query: 339 agctgtcccttggactgaagaagagcataggacatttcttgctggtctcgaaaagctggg 398 ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||| || Sbjct: 104590 agctgtcccttggactgaagaagagcaccgaacatttcttgctggtcttgaaaagctagg 104649 Query: 399 gaagggagactggaggggtatagcaaaaaattttgttactaccaggactccaactcaagt 458 ||||| ||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 104650 aaagggggactggaggggtatatctaagaactttgttactaccaggactccaactcaagt 104709 Query: 459 ggccagccatgctcagaaatattttctcagacaaactaatccaaacaagaagaagcgcag 518 ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104710 ggctagtcatgctcagaaatattttcttagacaaactaatccaaacaagaagaagcgcag 104769 Query: 519 gtctagcctttttgatatgatggcaa 544 || |||||||||||||||||||||| Sbjct: 104770 atcaagcctttttgatatgatggcaa 104795 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 245 ccggggacgctggaggcgcgggcgacgggtacctctccgacggcggccttttgcagtcgg 304 |||||||||| || || ||||||||||||||||||||||||| || || ||| ||| Sbjct: 101788 ccggggacgccgggggatcgggcgacgggtacctctccgacggtgggctgctgctgtcct 101847 Query: 305 ccggcaagcggcggagggcgcaggagaggaagaaag 340 |||||||||||||| | ||||||||||||||||||| Sbjct: 101848 ccggcaagcggcggcgcgcgcaggagaggaagaaag 101883 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 177 gagggaggacgtgatgcgcaagtgcaagagcatgggcaacctggccgcc 225 ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 101699 gagggaggacgcgatgcgcaagtgcaagagcatgggcaacctcgccgcc 101747 Score = 79.8 bits (40), Expect = 9e-12 Identities = 98/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 13 aaaacgccaccgccccactc-gtcggagc--cggccgccgggat--gcctcaagattcgc 67 ||||||||||||||| || | |||||||| |||||| |||||| |||||||||||||| Sbjct: 101527 aaaacgccaccgcccaaccccgtcggagcggcggccgtcgggatatgcctcaagattcgc 101586 Query: 68 gcccgccagggatgcgcctcttcggcgtcaccattgcgccggcgccggcgccgc 121 |||| | | |||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 101587 gccccgccgcgatgcgcctcttcggcgtcaccatctcgccgccgccgccgccgc 101640
>dbj|AK106331.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F07, full insert sequence Length = 1531 Score = 190 bits (96), Expect = 4e-45 Identities = 123/132 (93%) Strand = Plus / Plus Query: 441 caggactccaactcaagtggccagccatgctcagaaatattttctcagacaaactaatcc 500 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 827 caggactccaactcaagtggctagtcatgctcagaaatattttcttagacaaactaatcc 886 Query: 501 aaacaagaagaagcgcaggtctagcctttttgatatgatggcaagcgatttgtcaccagc 560 |||||||||||||||||| || |||||||||||||||||||||| ||| |||||||||| Sbjct: 887 aaacaagaagaagcgcagatcaagcctttttgatatgatggcaactgatatgtcaccagc 946 Query: 561 accaaattgccc 572 |||||| ||||| Sbjct: 947 accaaactgccc 958
>gb|AC149803.7| Medicago truncatula clone mth2-70e16, complete sequence Length = 96164 Score = 54.0 bits (27), Expect = 5e-04 Identities = 108/135 (80%) Strand = Plus / Plus Query: 349 tggactgaagaagagcataggacatttcttgctggtctcgaaaagctggggaagggagac 408 ||||| |||||||||||||| | ||| |||| ||| || || ||||| || || ||||| Sbjct: 12563 tggacagaagaagagcatagaaaattccttgttggacttgagaagcttggaaaaggagat 12622 Query: 409 tggaggggtatagcaaaaaattttgttactaccaggactccaactcaagtggccagccat 468 ||||||||||| | | ||| | ||| ||||| || || ||||| ||||| || |||||| Sbjct: 12623 tggaggggtatctctagaaactatgtgactacaagaacaccaacacaagttgcaagccat 12682 Query: 469 gctcagaaatatttt 483 ||||| || |||||| Sbjct: 12683 gctcaaaagtatttt 12697
>gb|AY712938.1| Hevea brasiliensis MYB transcription factor (MYB) gene, complete cds Length = 1547 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatattttctcag 488 |||||||| ||||| |||||||||||||| |||||| |||| Sbjct: 911 ccaactcaggtggctagccatgctcagaagtattttatcag 951
>ref|NM_197748.1| Oryza sativa (japonica cultivar-group) putative Myb-related protein (OSJNBb0089A17.8), mRNA Length = 1197 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 388 actcaagtagccagtcatgctcagaaatatttt 420
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 61 actcaagtagccagtcatgctcagaaatatttt 93
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 41900 actcaagtagccagtcatgctcagaaatatttt 41868
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 21609996 actcaagtagccagtcatgctcagaaatatttt 21609964 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 12617592 gcgccggcgccggcgccgca 12617573
>gb|AF239956.1| Hevea brasiliensis unknown mRNA Length = 1204 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatattttctcag 488 |||||||| ||||| |||||||||||||| |||||| |||| Sbjct: 556 ccaactcaggtggctagccatgctcagaagtattttatcag 596
>dbj|AK105558.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B06, full insert sequence Length = 1770 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 629 actcaagtagccagtcatgctcagaaatatttt 661
>dbj|AK101062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022I10, full insert sequence Length = 1357 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 524 actcaagtagccagtcatgctcagaaatatttt 556
>dbj|AK066961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093O16, full insert sequence Length = 1470 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 637 actcaagtagccagtcatgctcagaaatatttt 669
>dbj|AK059716.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G03, full insert sequence Length = 1303 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 535 actcaagtagccagtcatgctcagaaatatttt 567
>gb|DQ323739.1| Hevea brasiliensis MYB transcription factor (MYB) mRNA, complete cds Length = 970 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatattttctcag 488 |||||||| ||||| |||||||||||||| |||||| |||| Sbjct: 524 ccaactcaggtggctagccatgctcagaagtattttatcag 564
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 21621659 actcaagtagccagtcatgctcagaaatatttt 21621627 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 12624932 gcgccggcgccggcgccgca 12624913
>gb|AY151044.1| Oryza sativa (japonica cultivar-group) transcription factor MYBS3 mRNA, complete cds Length = 1287 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 actcaagtggccagccatgctcagaaatatttt 483 |||||||| ||||| |||||||||||||||||| Sbjct: 454 actcaagtagccagtcatgctcagaaatatttt 486
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 172 gcggtgagggaggacgtgatgcgcaagt 199 ||||| |||||||||||||||||||||| Sbjct: 828101 gcggtcagggaggacgtgatgcgcaagt 828074
>emb|AL953893.17| Zebrafish DNA sequence from clone DKEY-60B12, complete sequence Length = 216749 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 479 attttctcagacaaactaatccaaacaa 506 |||||||||||||||| ||||||||||| Sbjct: 96136 attttctcagacaaacaaatccaaacaa 96163
>ref|NM_189640.1| Oryza sativa (japonica cultivar-group), Ozsa8068 predicted mRNA Length = 1044 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 427 aattttgttactaccaggactccaactcaagtggccagccatgctca 473 ||||||||| | ||||||| |||||||| ||||| ||||||||||| Sbjct: 406 aattttgttgtttccaggacaccaactcaggtggctagccatgctca 452 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 325 ccttggactgaagaagagcatag 347
>ref|NM_189680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 46.1 bits (23), Expect = 0.13 Identities = 71/87 (81%) Strand = Plus / Plus Query: 325 caggagaggaagaaagctgtcccttggactgaagaagagcataggacatttcttgctggt 384 |||||||||||||| | ||| || ||||||||||| ||||| |||| ||| || | || Sbjct: 352 caggagaggaagaagggtgttccatggactgaagaggagcacaggaaattcctggtaggg 411 Query: 385 ctcgaaaagctggggaagggagactgg 411 ||||| ||||| ||||| || |||||| Sbjct: 412 ctcgagaagctcgggaaaggcgactgg 438 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 457 gtggccagccatgctcagaaatattttctcag 488 |||||||||||||| ||||| ||||| ||||| Sbjct: 484 gtggccagccatgcccagaagtatttcctcag 515
>emb|AL139085.13| Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precursor (CHM-I), a novel gene, the PCDH8 gene for protocadherin 8 and 4 CpG islands, complete sequence Length = 173292 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 396 ggggaagggagactggaggggta 418 ||||||||||||||||||||||| Sbjct: 134271 ggggaagggagactggaggggta 134249
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 4714848 ccttggactgaagaagagcatag 4714826 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 427 aattttgttactaccaggactccaactcaagtggccagccatgctca 473 ||||||||| | ||||||| |||||||| ||||| ||||||||||| Sbjct: 4714767 aattttgttgtttccaggacaccaactcaggtggctagccatgctca 4714721 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 19979094 tgcgccggcgccggcgccgc 19979075 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 457 gtggccagccatgctcagaaatattttctcag 488 |||||||||||||| ||||| ||||| ||||| Sbjct: 4971265 gtggccagccatgcccagaagtatttcctcag 4971234 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctcgtcggagccggccgccg 49 |||||||||||||||||||| Sbjct: 4827354 ctcgtcggagccggccgccg 4827373
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 75093 ccttggactgaagaagagcatag 75071 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 427 aattttgttactaccaggactccaactcaagtggccagccatgctca 473 ||||||||| | ||||||| |||||||| ||||| ||||||||||| Sbjct: 75012 aattttgttgtttccaggacaccaactcaggtggctagccatgctca 74966
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 122064 ccttggactgaagaagagcatag 122042 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 427 aattttgttactaccaggactccaactcaagtggccagccatgctca 473 ||||||||| | ||||||| |||||||| ||||| ||||||||||| Sbjct: 121983 aattttgttgtttccaggacaccaactcaggtggctagccatgctca 121937
>dbj|AB083028.1| Glycine max mRNA for syringolide-induced protein 1-3-1B, complete cds Length = 1243 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatattttctc 486 ||||||||||| || |||||||| |||||||| |||||| Sbjct: 654 ccaactcaagtagctagccatgcccagaaatactttctc 692
>emb|AJ234594.1|HVU234594 Hordeum vulgare genomic DNA fragment; clone MWG0852.rev Length = 400 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 39 ccttggactgaagaagagcatag 17
>dbj|AK071611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105I20, full insert sequence Length = 1434 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 427 aattttgttactaccaggactccaactcaagtggccagccatgctca 473 ||||||||| | ||||||| |||||||| ||||| ||||||||||| Sbjct: 526 aattttgttgtttccaggacaccaactcaggtggctagccatgctca 572 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 ccttggactgaagaagagcatag 368 ||||||||||||||||||||||| Sbjct: 445 ccttggactgaagaagagcatag 467
>dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B07, full insert sequence Length = 1476 Score = 46.1 bits (23), Expect = 0.13 Identities = 71/87 (81%) Strand = Plus / Plus Query: 325 caggagaggaagaaagctgtcccttggactgaagaagagcataggacatttcttgctggt 384 |||||||||||||| | ||| || ||||||||||| ||||| |||| ||| || | || Sbjct: 676 caggagaggaagaagggtgttccatggactgaagaggagcacaggaaattcctggtaggg 735 Query: 385 ctcgaaaagctggggaagggagactgg 411 ||||| ||||| ||||| || |||||| Sbjct: 736 ctcgagaagctcgggaaaggcgactgg 762 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 457 gtggccagccatgctcagaaatattttctcag 488 |||||||||||||| ||||| ||||| ||||| Sbjct: 808 gtggccagccatgcccagaagtatttcctcag 839
>ref|NM_101757.2| Arabidopsis thaliana DNA binding / transcription factor AT1G19000 transcript variant AT1G19000.1 mRNA, complete cds Length = 1322 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 505 aggactcctactcaagtagctagtcatgctcagaaata 542
>ref|NM_179358.1| Arabidopsis thaliana DNA binding / transcription factor AT1G19000 transcript variant AT1G19000.2 mRNA, complete cds Length = 1498 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 500 aggactcctactcaagtagctagtcatgctcagaaata 537
>ref|NM_117013.2| Arabidopsis thaliana DNA binding / transcription factor AT4G09450 mRNA, complete cds Length = 634 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatatttt 483 |||||||| |||||||||||||| |||||| Sbjct: 382 caagtggcaagccatgctcagaagtatttt 411
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgcact 124 |||||||||||||||||||||| Sbjct: 85528 gcgccggcgccggcgccgcact 85507
>emb|AL158074.18| Human DNA sequence from clone RP11-330J23 on chromosome 9p21.1-22.3, complete sequence Length = 133690 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 473 agaaatattttctcagacaaac 494 |||||||||||||||||||||| Sbjct: 60072 agaaatattttctcagacaaac 60051
>gb|AY122911.1| Arabidopsis thaliana unknown protein (At4g09450) mRNA, complete cds Length = 634 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatatttt 483 |||||||| |||||||||||||| |||||| Sbjct: 382 caagtggcaagccatgctcagaagtatttt 411
>gb|AY079415.1| Arabidopsis thaliana putative Myb-related transcription activator protein (At1g19000) mRNA, complete cds Length = 889 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 403 aggactcctactcaagtagctagtcatgctcagaaata 440
>gb|AY045881.1| Arabidopsis thaliana putative Myb-related transcription activator protein (At1g19000) mRNA, complete cds Length = 1510 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 499 aggactcctactcaagtagctagtcatgctcagaaata 536
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatatttt 483 |||||||| |||||||||||||| |||||| Sbjct: 1895 caagtggcaagccatgctcagaagtatttt 1924
>emb|AL161514.2|ATCHRIV26 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 26 Length = 199754 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatatttt 483 |||||||| |||||||||||||| |||||| Sbjct: 196649 caagtggcaagccatgctcagaagtatttt 196678
>emb|BX814155.1|CNS0ADPF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1445 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 482 aggactcctactcaagtagctagtcatgctcagaaata 519
>emb|BX830534.1|CNS0A1Y7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 44.1 bits (22), Expect = 0.51 Identities = 82/102 (80%) Strand = Plus / Plus Query: 391 aagctggggaagggagactggaggggtatagcaaaaaattttgttactaccaggactcca 450 |||||||| || || || ||||| ||||| ||| ||| | |||||| || ||||| || Sbjct: 430 aagctgggtaaaggtgattggagaggtatctcaagaaactatgttaccactaggacacct 489 Query: 451 actcaagtggccagccatgctcagaaatattttctcagacaa 492 || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 490 acacaagttgctagccatgctcagaagtatttcatcagacaa 531
>emb|BX830593.1|CNS09ZYA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1445 Score = 44.1 bits (22), Expect = 0.51 Identities = 82/102 (80%) Strand = Plus / Plus Query: 391 aagctggggaagggagactggaggggtatagcaaaaaattttgttactaccaggactcca 450 |||||||| || || || ||||| ||||| ||| ||| | |||||| || ||||| || Sbjct: 427 aagctgggtaaaggtgattggagaggtatctcaagaaactatgttaccactaggacacct 486 Query: 451 actcaagtggccagccatgctcagaaatattttctcagacaa 492 || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 487 acacaagttgctagccatgctcagaagtatttcatcagacaa 528
>gb|AY088105.1| Arabidopsis thaliana clone 41381 mRNA, complete sequence Length = 1303 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 505 aggactcctactcaagtagctagtcatgctcagaaata 542
>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I, complete sequence Length = 87508 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 |||||||| |||||||| || || |||||||||||||| Sbjct: 36959 aggactcctactcaagtagctagtcatgctcagaaata 36922
>emb|AJ538900.1|NTA538900 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-006 Length = 394 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaata 479 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 126 aggacaccaacacaagtggccagtcatgctcaaaaata 163
>dbj|AB083027.1| Glycine max mRNA for syringolide-induced protein 1-3-1A, complete cds Length = 1191 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatattttct 485 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 611 ccaactcaagtagctagccatgcccagaaatactttct 648
>dbj|AK068476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151O19, full insert sequence Length = 900 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 gcgccggcgccggcgccgcact 124 |||||||||||||||||||||| Sbjct: 240 gcgccggcgccggcgccgcact 261
>gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chromosome IV, near 25 cM, complete sequence Length = 113800 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 454 caagtggccagccatgctcagaaatatttt 483 |||||||| |||||||||||||| |||||| Sbjct: 67411 caagtggcaagccatgctcagaagtatttt 67382
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ttcggcgtcaccattgcgccg 108 ||||||||||||||||||||| Sbjct: 3362677 ttcggcgtcaccattgcgccg 3362697
>ref|NM_112506.3| Arabidopsis thaliana DNA binding / transcription factor AT3G16350 mRNA, complete cds Length = 1537 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 328 gagaggaagaaagctgtcccttggactgaagaagagcatag 368 |||||||||| || ||| |||||||||||||| || ||||| Sbjct: 504 gagaggaagagaggtgttccttggactgaagaggaacatag 544
>ref|XM_476082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 436 actaccaggactccaactcaagtggccagccatgctcagaa 476 |||||| |||||||||| || || ||||||||||| ||||| Sbjct: 460 actacccggactccaacgcaggtcgccagccatgcccagaa 500
>ref|NM_105669.2| Arabidopsis thaliana nucleic acid binding / transcription factor AT1G70000 mRNA, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctc 486 ||||||||||||||||||||| Sbjct: 479 catgctcagaaatattttctc 499
>ref|NM_111894.1| Arabidopsis thaliana DNA binding / transcription factor AT3G10580 mRNA, complete cds Length = 864 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatattt 482 |||||||| |||||||||||||| ||||| Sbjct: 394 caagtggcaagccatgctcagaagtattt 422
>ref|XM_469947.1| Oryza sativa (japonica cultivar-group), mRNA Length = 420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 308 cggtggcggtgagggaggacg 328
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 31752 cggtggcggtgagggaggacg 31772
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 104553 cggtggcggtgagggaggacg 104573
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 81359 cggtggcggtgagggaggacg 81379
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 436 actaccaggactccaactcaagtggccagccatgctcagaa 476 |||||| |||||||||| || || ||||||||||| ||||| Sbjct: 111728 actacccggactccaacgcaggtcgccagccatgcccagaa 111688
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 32639354 cggtggcggtgagggaggacg 32639334 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 7835488 cggtggcggtgagggaggacg 7835468
>gb|AY519512.1| Arabidopsis thaliana MYB transcription factor (At3g16350) mRNA, complete cds Length = 1164 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 328 gagaggaagaaagctgtcccttggactgaagaagagcatag 368 |||||||||| || ||| |||||||||||||| || ||||| Sbjct: 394 gagaggaagagaggtgttccttggactgaagaggaacatag 434
>gb|AY519509.1| Arabidopsis thaliana MYB transcription factor (At1g70000) mRNA, complete cds Length = 786 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctc 486 ||||||||||||||||||||| Sbjct: 415 catgctcagaaatattttctc 435
>ref|XM_845163.1| PREDICTED: Canis familiaris similar to TGF-beta induced apotosis protein 12, transcript variant 3 (LOC486541), mRNA Length = 2071 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gtcggccggcaagcggcggagggcg 324 ||||||||||| ||||||||||||| Sbjct: 92 gtcggccggcaggcggcggagggcg 68
>gb|AC146014.2| Pan troglodytes BAC clone RP43-128N21 from 7, complete sequence Length = 178714 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 agaaatattttctcagacaaa 493 ||||||||||||||||||||| Sbjct: 16834 agaaatattttctcagacaaa 16814
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence, complete sequence Length = 93985 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 caagtggccagccatgctcagaaatattt 482 |||||||| |||||||||||||| ||||| Sbjct: 64713 caagtggcaagccatgctcagaagtattt 64685
>gb|AC130307.3| Homo sapiens chromosome 11, clone RP11-15D10, complete sequence Length = 159817 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 475 aaatattttctcagacaaactaatc 499 ||||||||||||||||| ||||||| Sbjct: 148150 aaatattttctcagacatactaatc 148126
>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence Length = 121295 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 442 aggactccaactcaagtggccagccatgctcagaaatattt 482 ||||| || |||||||||||||| || ||||| |||||||| Sbjct: 83596 aggacacctactcaagtggccagtcacgctcaaaaatattt 83636
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgca 122 ||||||||||||||||||||| Sbjct: 4322298 tgcgccggcgccggcgccgca 4322318
>gb|AC104811.4| Homo sapiens BAC clone RP11-653L5 from 4, complete sequence Length = 96481 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 agaaatattttctcagacaaa 493 ||||||||||||||||||||| Sbjct: 53094 agaaatattttctcagacaaa 53074
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 442 aggactccaactcaagtggccagccatgctcagaaatattt 482 ||||| ||||| ||||| || |||||||||||||| ||||| Sbjct: 126015 aggacaccaacacaagttgctagccatgctcagaagtattt 125975
>gb|BT006413.1| Arabidopsis thaliana At1g70000 gene, complete cds Length = 786 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctc 486 ||||||||||||||||||||| Sbjct: 415 catgctcagaaatattttctc 435
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 13213160 cggtggcggtgagggaggacg 13213180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgcac 123 ||||||||||||||||||||| Sbjct: 10009105 gcgccggcgccggcgccgcac 10009085
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 29197900 cggtggcggtgagggaggacg 29197920 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 20718528 cggtggcggtgagggaggacg 20718548 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 436 actaccaggactccaactcaagtggccagccatgctcagaa 476 |||||| |||||||||| || || ||||||||||| ||||| Sbjct: 5789354 actacccggactccaacgcaggtcgccagccatgcccagaa 5789314
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 32729864 cggtggcggtgagggaggacg 32729844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 7833323 cggtggcggtgagggaggacg 7833303
>emb|BX819575.1|CNS0A8XQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1557 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 321 ggcgcaggagaggaagaaagctgtcccttggactgaagaag 361 |||||| ||||||||||||| ||| || ||||| ||||||| Sbjct: 910 ggcgcatgagaggaagaaaggtgttccatggacagaagaag 950
>emb|BX823088.1|CNS0A5YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1470 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 328 gagaggaagaaagctgtcccttggactgaagaagagcatag 368 |||||||||| || ||| |||||||||||||| || ||||| Sbjct: 435 gagaggaagagaggtgttccttggactgaagaggaacatag 475
>emb|BX823558.1|CNS0A5FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 328 gagaggaagaaagctgtcccttggactgaagaagagcatag 368 |||||||||| || ||| |||||||||||||| || ||||| Sbjct: 450 gagaggaagagaggtgttccttggactgaagaggaacatag 490
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 caagtggccagccatgctcagaaatattt 482 |||||||| |||||||||||||| ||||| Sbjct: 39804 caagtggcaagccatgctcagaagtattt 39832
>gb|BT005832.1| Arabidopsis thaliana At3g16350 gene, complete cds Length = 1164 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 328 gagaggaagaaagctgtcccttggactgaagaagagcatag 368 |||||||||| || ||| |||||||||||||| || ||||| Sbjct: 394 gagaggaagagaggtgttccttggactgaagaggaacatag 434
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 21086 cggtggcggtgagggaggacg 21066
>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence Length = 186744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 475 aaatattttctcagacaaactaatc 499 ||||||||||||||||| ||||||| Sbjct: 18823 aaatattttctcagacatactaatc 18799
>gb|DQ074475.1| Malus x domestica MYBR2 mRNA, complete cds Length = 1226 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 395 tggggaagggagactggaggggtatagcaaaaaattttgttactaccaggactccaactc 454 ||||||||||||||||| | || |||||| | || ||| || || |||||||| || | Sbjct: 384 tggggaagggagactggcgtgggatagcacggagttatgtgacgactaggactcccaccc 443 Query: 455 aagtggccagccatgctcagaaatatttt 483 | ||||| |||||||| ||||| |||||| Sbjct: 444 aggtggcaagccatgcccagaagtatttt 472
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgcac 123 ||||||||||||||||||||| Sbjct: 82670 gcgccggcgccggcgccgcac 82650
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 130348 cggtggcggtgagggaggacg 130368
>dbj|AK065594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029P13, full insert sequence Length = 3358 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 436 actaccaggactccaactcaagtggccagccatgctcagaa 476 |||||| |||||||||| || || ||||||||||| ||||| Sbjct: 2373 actacccggactccaacgcaggtcgccagccatgcccagaa 2413
>dbj|AK061427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H01, full insert sequence Length = 1149 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 436 actaccaggactccaactcaagtggccagccatgctcagaa 476 |||||| |||||||||| || || ||||||||||| ||||| Sbjct: 575 actacccggactccaacgcaggtcgccagccatgcccagaa 615
>gb|AY104494.1| Zea mays PCO133236 mRNA sequence Length = 1077 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 ttgcgccggcgccggcgccgc 121 ||||||||||||||||||||| Sbjct: 239 ttgcgccggcgccggcgccgc 219
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgcac 123 ||||||||||||||||||||| Sbjct: 1416846 gcgccggcgccggcgccgcac 1416826
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cggtggcggtgagggaggacg 187 ||||||||||||||||||||| Sbjct: 18644 cggtggcggtgagggaggacg 18664
>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete sequence Length = 114505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctc 486 ||||||||||||||||||||| Sbjct: 98559 catgctcagaaatattttctc 98579
>ref|NM_125556.1| Arabidopsis thaliana transcription factor AT5G61620 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatatttt 483 ||||| ||||| || || |||||||||||||||||| Sbjct: 427 ccaacacaagtcgcaagtcatgctcagaaatatttt 462
>ref|NM_189657.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctcgtcggagccggccgccg 49 |||||||||||||||||||| Sbjct: 1341 ctcgtcggagccggccgccg 1360
>ref|NM_196310.1| Oryza sativa (japonica cultivar-group) putative lipase (OSJNBa0068A07.21), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 977 gcgccggcgccggcgccgca 958
>ref|NM_187382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 408 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 38 tgcgccggcgccggcgccgc 19
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 26547 tgcgccggcgccggcgccgc 26566
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 99874 tgcgccggcgccggcgccgc 99893
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 125848 tgcgccggcgccggcgccgc 125867
>ref|XM_323029.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03728.1) partial mRNA Length = 2235 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 2060 ttgcgccggcgccggcgccg 2079
>ref|XM_956411.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03728.1) partial mRNA Length = 2235 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 2060 ttgcgccggcgccggcgccg 2079
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 atatgatggcaagcgatttg 552 |||||||||||||||||||| Sbjct: 395569 atatgatggcaagcgatttg 395588
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cgccggcgccggcgccgcac 123 |||||||||||||||||||| Sbjct: 2676809 cgccggcgccggcgccgcac 2676828 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 864654 tgcgccggcgccggcgccgc 864673 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 424503 tgcgccggcgccggcgccgc 424484
>gb|AY548531.1| Elaeis oleifera clone RA11 serine/threonine kinase-like mRNA, partial sequence Length = 607 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 ctgtcccttggactgaagaagagc 364 |||||||| ||||||||||||||| Sbjct: 264 ctgtccctcggactgaagaagagc 241
>gb|AY460342.1| Choristoneura fumiferana RNA helicase mRNA, complete cds Length = 1998 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 1705 gcgccggcgccggcgccgca 1724
>gb|AY423549.1| Lycopersicon esculentum coronatine-insensitive 1 (Coi1) gene, complete cds Length = 9377 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 actccaactcaagtggccagccatgctcagaa 476 |||||||| |||||||| || ||||||||||| Sbjct: 9080 actccaacacaagtggctagtcatgctcagaa 9049
>gb|AC116478.14| Mus musculus chromosome 8, clone RP23-396E23, complete sequence Length = 193468 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctgtcccttggactgaagaa 360 |||||||||||||||||||| Sbjct: 54298 ctgtcccttggactgaagaa 54317
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence Length = 182686 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 agctggggaagggagactgg 411 |||||||||||||||||||| Sbjct: 11673 agctggggaagggagactgg 11692
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 atatgatggcaagcgatttg 552 |||||||||||||||||||| Sbjct: 427392 atatgatggcaagcgatttg 427411
>emb|AL590682.9| Human DNA sequence from clone RP11-435F13 on chromosome 1 Contains a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene, part of the RGS7 gene for regulator of G-protein signalling 7 and a ribosomal protein large P1 (RPLP1) pseudogene, complete sequence Length = 155156 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aaatattttctcagacaaac 494 |||||||||||||||||||| Sbjct: 34923 aaatattttctcagacaaac 34942
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctcaga 489 ||||||||||||||||||| |||| Sbjct: 445553 catgctcagaaatattttcacaga 445576
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the 5' end of a novel gene, the gene for glutathione transferase omega 1 (GSTO1), the 5' end of a variant of the gene for a novel glutathione-S-transferase and two CpG islands, complete sequence Length = 104378 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 acccaccggtggcggtgagggagg 184 ||||||||||||||||||| |||| Sbjct: 100017 acccaccggtggcggtgagagagg 99994
>gb|AC090229.15| Homo sapiens chromosome 18, clone RP11-873E20, complete sequence Length = 192106 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gactgaagaagagcatagga 370 |||||||||||||||||||| Sbjct: 44359 gactgaagaagagcatagga 44378
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 35871 gcgccggcgccggcgccgca 35852
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 2183331 tgcgccggcgccggcgccgc 2183350
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 67347 tgcgccggcgccggcgccgc 67366
>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence Length = 176679 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 11499 gcgccggcgccggcgccgca 11480
>gb|AC159098.6| Mus musculus chromosome 8, clone RP24-391C9, complete sequence Length = 184137 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ctgtcccttggactgaagaa 360 |||||||||||||||||||| Sbjct: 92114 ctgtcccttggactgaagaa 92095
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 137679 gcgccggcgccggcgccgca 137660
>gb|AC152819.6| Mus musculus BAC clone RP24-572P24 from chromosome 10, complete sequence Length = 185665 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 agctggggaagggagactgg 411 |||||||||||||||||||| Sbjct: 83330 agctggggaagggagactgg 83311
>gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, complete sequence Length = 162391 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aaatattttctcagacaaac 494 |||||||||||||||||||| Sbjct: 84264 aaatattttctcagacaaac 84283
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cgcctcttcggcgtcaccat 101 |||||||||||||||||||| Sbjct: 1051261 cgcctcttcggcgtcaccat 1051280
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 145970 gcgccggcgccggcgccgca 145989
>gb|AC068931.6| Homo sapiens chromosome 8, clone RP11-650B11, complete sequence Length = 101474 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 catgctcagaaatattttctcaga 489 ||||||||||||||||||| |||| Sbjct: 11773 catgctcagaaatattttcacaga 11750
>gb|AC022833.5| Homo sapiens chromosome , clone RP11-147C21, complete sequence Length = 177019 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 catgctcagaaatattttctcaga 489 ||||||||||||||||||| |||| Sbjct: 175617 catgctcagaaatattttcacaga 175594
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ggtatagcaaaaaattttgt 434 |||||||||||||||||||| Sbjct: 1626140 ggtatagcaaaaaattttgt 1626159
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 42656 tgcgccggcgccggcgccgc 42637
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 1039994 tgcgccggcgccggcgccgc 1040013
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 catgctcagaaatattttctcaga 489 ||||||||||||||||||| |||| Sbjct: 445553 catgctcagaaatattttcacaga 445576
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 32171658 tgcgccggcgccggcgccgc 32171677
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 4895019 tgcgccggcgccggcgccgc 4895000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 3288438 tgcgccggcgccggcgccgc 3288419
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 18629266 tgcgccggcgccggcgccgc 18629285
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 27357031 ttgcgccggcgccggcgccg 27357012
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 82003 tgcgccggcgccggcgccgc 81984
>ref|XM_345550.2| PREDICTED: Rattus norvegicus family with sequence similarity 29, member A (predicted) (Fam29a_predicted), mRNA Length = 3432 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 387 tgcgccggcgccggcgccgc 368
>gb|AC079246.2| Homo sapiens BAC clone CTD-2002G20 from 2, complete sequence Length = 99940 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cagaaatattttctcagaca 491 |||||||||||||||||||| Sbjct: 8641 cagaaatattttctcagaca 8660
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 54320 tgcgccggcgccggcgccgc 54339
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 81808 tgcgccggcgccggcgccgc 81827
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 2969 ttgcgccggcgccggcgccg 2950
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 457 gtggccagccatgctcagaaatattttctcag 488 |||||||||||||| ||||| ||||| ||||| Sbjct: 71718 gtggccagccatgcccagaagtatttcctcag 71687
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctcgtcggagccggccgccg 49 |||||||||||||||||||| Sbjct: 72003 ctcgtcggagccggccgccg 72022
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 71964 ttgcgccggcgccggcgccg 71945
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 448 ccaactcaagtggccagccatgctcagaaatatttt 483 ||||| ||||| || || |||||||||||||||||| Sbjct: 47457 ccaacacaagtcgcaagtcatgctcagaaatatttt 47492
>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ctcgtcggagccggccgccg 49 |||||||||||||||||||| Sbjct: 1454 ctcgtcggagccggccgccg 1473
>dbj|AK108245.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-H05, full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 1040 gcgccggcgccggcgccgca 1021
>dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092K06, full insert sequence Length = 1907 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 457 gtggccagccatgctcagaaatattttctcag 488 |||||||||||||| ||||| ||||| ||||| Sbjct: 1108 gtggccagccatgcccagaagtatttcctcag 1139
>gb|AY105067.1| Zea mays PCO081051 mRNA sequence Length = 1398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gcgccggcgccggcgccgca 122 |||||||||||||||||||| Sbjct: 823 gcgccggcgccggcgccgca 842
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 22912 tgcgccggcgccggcgccgc 22931
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 4913803 tgcgccggcgccggcgccgc 4913784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tgcgccggcgccggcgccgc 121 |||||||||||||||||||| Sbjct: 3297151 tgcgccggcgccggcgccgc 3297132
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ttgcgccggcgccggcgccg 120 |||||||||||||||||||| Sbjct: 50001 ttgcgccggcgccggcgccg 50020
>gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174860 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 agccggccgccgggatgcct 57 |||||||||||||||||||| Sbjct: 109909 agccggccgccgggatgcct 109890
>emb|AL607108.17| Mouse DNA sequence from clone RP23-42F6 on chromosome 11, complete sequence Length = 202842 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 551 tgtcaccagcaccaaattgcccca 574 |||||||||||||||| ||||||| Sbjct: 145804 tgtcaccagcaccaaaatgcccca 145827 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,520,547 Number of Sequences: 3902068 Number of extensions: 5520547 Number of successful extensions: 121570 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 118058 Number of HSP's gapped (non-prelim): 3508 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
