ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30h07 |
|---|---|
| Clone Library Name | barley_pub |
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 425 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 260 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + SCFG G V +K+I NR +GVS+GYGFV F + +K Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQK 95
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 51.6 bits (122), Expect = 1e-06 Identities = 20/53 (37%), Positives = 36/53 (67%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 + T+W+G+ + W+ E ++ + G+ V +K+IRNR++G++ GY FVEF S Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFAS 143 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = +1 Query: 355 NRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 N T++VG ++ E L F GE+V +K+ + G GFV+F + SAE Sbjct: 302 NSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGK------GCGFVQFVNRQSAE 352
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + S F G V +K+I +R +GVS+GYGFV FY+ +K Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQK 95
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + S F G V +K+I +R +GVS+GYGFV F++ +K Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + S F G V +K+I +R +GVS+GYGFV F++ +K Sbjct: 41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/54 (37%), Positives = 34/54 (62%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 D + ++VG+ + +D++ L + F G+VV KV+ +R SG S G+GFV + S Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSS 238
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG MDE + F G V +K+I +R +GVS+GYGFV F++ +K Sbjct: 41 TVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQK 95
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSE--GYGFVEFYSHASAEK 528 T+W+GD + WMD ++ + E V +KV+R++ S Y FV+F S A+AE+ Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAER 143 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +1 Query: 355 NRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 N T++VG + E L CF P G ++ IK+ +G GFV++ ++AEK Sbjct: 296 NTTVFVGGLASNLSEKDLQVCFQPFGRILNIKI------PFGKGCGFVQYSEKSAAEK 347
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/54 (37%), Positives = 34/54 (62%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 D + ++VG+ + +D++ L + F G+VV KV+ +R SG S G+GFV + S Sbjct: 191 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSS 244
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 43.5 bits (101), Expect = 4e-04 Identities = 18/51 (35%), Positives = 33/51 (64%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 + R+++VG+ Y +DE+ L F G +V ++++RN +GV G+G+V F Sbjct: 283 DKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLF 333
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 42.4 bits (98), Expect = 8e-04 Identities = 19/54 (35%), Positives = 32/54 (59%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + + S F P G++ +V+++ +G S+GYGFV FY+ AE Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 152
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 42.4 bits (98), Expect = 8e-04 Identities = 23/77 (29%), Positives = 38/77 (49%) Frame = +1 Query: 298 ASVTXXXXXXXXXXXXXDENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGV 477 A+VT N +++VGD + + ++ L FG G VVT++V R+ + Sbjct: 16 AAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRR 75 Query: 478 SEGYGFVEFYSHASAEK 528 S GYG+V F + A + Sbjct: 76 SLGYGYVNFTNPQDAAR 92 Score = 37.4 bits (85), Expect = 0.026 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D LH F G +V+ KV + SG S+GYGFV++ + SA+K Sbjct: 135 IDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQK 179
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 42.4 bits (98), Expect = 8e-04 Identities = 19/54 (35%), Positives = 32/54 (59%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + + S F P G++ +V+++ +G S+GYGFV FY+ AE Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 169
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 D + ++VG+ + +D+ L F G VV KV+ +R SG S G+GFV + S Sbjct: 204 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 257
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/55 (38%), Positives = 33/55 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG + +EN L F G V +K++ +R +GVS+GYGF+ F + A+K Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQK 88
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/54 (37%), Positives = 31/54 (57%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 D + ++VG+ + +D+ L F G VV KV+ +R SG S G+GFV + S Sbjct: 205 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 258
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/49 (40%), Positives = 32/49 (65%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 ++VG+ + +D+ L S F G+VV +VI +R SG S+G+GFV + S Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDS 254
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/55 (36%), Positives = 33/55 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++VG+ + +D+ L + F G+VV +VI +R SG S+G+GFV S +K Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 313
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 41.2 bits (95), Expect = 0.002 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG M+E + S F G V +K+I +R +GVS+GYGFV F + +K Sbjct: 37 TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQK 91
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 40.8 bits (94), Expect = 0.002 Identities = 16/51 (31%), Positives = 33/51 (64%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 + R+++VG+ Y ++++ L F G +V ++++RN +GV G+G+V F Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLF 339
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 + + +++VGD + + E +L+ F P G V +I+V R+ + S GY +V F H + K Sbjct: 34 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 93
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 289 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 331 Score = 33.1 bits (74), Expect = 0.48 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +G+S G GF+ F AE+ Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 330 Score = 33.1 bits (74), Expect = 0.48 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +G+S G GF+ F AE+ Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 330 Score = 33.1 bits (74), Expect = 0.48 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +G+S G GF+ F AE+ Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 330 Score = 33.1 bits (74), Expect = 0.48 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +G+S G GF+ F AE+ Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 181
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/55 (38%), Positives = 33/55 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG + +E+ L F G V +K++ +R +GVS+GYGFV F + A+K Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQK 88
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/55 (38%), Positives = 33/55 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG + +E+ L F G V +K++ +R +GVS+GYGFV F + A+K Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQK 88
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 40.4 bits (93), Expect = 0.003 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHA 516 +++ I+VG+ + +D+ L F G+VV+ +V+ +R +G S G+GFV S A Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEA 282 Score = 35.8 bits (81), Expect = 0.074 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E+ ++VG+ Y +D L F +G V +VI NR + S G+GFV + AEK Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEK 192
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/60 (36%), Positives = 35/60 (58%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +E TI+VG + +D+ +L F G V+ +VI R + S GYG+V+F + + AEK Sbjct: 165 EEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEK 224 Score = 33.9 bits (76), Expect = 0.28 Identities = 14/56 (25%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T+++G+ + D + + F GEVV++++ + + +G+G+V+F + A+K Sbjct: 268 TLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKK 323
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + DE L + F GE+V K+I +R +G S G+GFV F S Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKS 61
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/51 (39%), Positives = 31/51 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHA 516 I+VG+ + +D+ L F G+VV+ +V+ +R SG S G+GFV S A Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEA 243
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 39.3 bits (90), Expect = 0.007 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 62 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 107 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 314 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEA 356 Score = 33.5 bits (75), Expect = 0.37 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +GVS G GF+ F AE+ Sbjct: 148 MTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 193
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 39.3 bits (90), Expect = 0.007 Identities = 20/59 (33%), Positives = 36/59 (61%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +E T++VG + +D+ +L F G +V +VI + SG S+GYG+V+F + +A+ Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAK 318 Score = 36.2 bits (82), Expect = 0.057 Identities = 18/56 (32%), Positives = 34/56 (60%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 T++VG+ + E+ L + FG G++ +I++ + SG +G+G+V F SA+K Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 39.3 bits (90), Expect = 0.007 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 57 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 102 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 309 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEA 351 Score = 33.5 bits (75), Expect = 0.37 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +GVS G GF+ F AE+ Sbjct: 143 MTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 188
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 39.3 bits (90), Expect = 0.007 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + S FG GE+ + K++R++ +G S GYGFV + AEK Sbjct: 50 MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 302 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEA 344 Score = 33.5 bits (75), Expect = 0.37 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L F G ++T +++ ++ +GVS G GF+ F AE+ Sbjct: 136 MTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 181
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 38.9 bits (89), Expect = 0.009 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + + + F P G + +V+++ +G S+GYGFV F++ AE Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + H G S G+GFV F H A+K Sbjct: 202 MDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQK 246 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + SG S+G+GFV F H A+K Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK 246 Score = 33.5 bits (75), Expect = 0.37 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++VGD + E L+ F P+G +++I++ R+ + S Y +V F AE Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAE 66
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + SG S+G+GFV F H A+K Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK 246 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + SG S+G+GFV F H A+K Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK 246 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + SG S+G+GFV F H A+K Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK 246 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 MD+ L FG G +++KV+ + SG S+G+GFV F H A+K Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQK 246 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 38.9 bits (89), Expect = 0.009 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +++G + D+ L F G+VV KVI +R +G S G+GFV F +A Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAA 89
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M ++ L S F GEV + K+IR++ +G S GYGFV + + AE+ Sbjct: 31 MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE L FGP G V +KVIR+ ++ +G+GFV ++ A Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEA 298
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 38.5 bits (88), Expect = 0.011 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++ T++VG + E L F +G VV + ++R +G +GYGFVEF S A+ Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDAD 68
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + D+ L + F GEV+ K+I +R +G S G+GFV F S Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKS 61
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + + S+GYGFV F + +AE+ Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAER 153
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/59 (32%), Positives = 34/59 (57%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 D RTI++G Y +DE L F GE+ I++++++ + S+GY F+ F S++ Sbjct: 104 DPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSK 162
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 38.5 bits (88), Expect = 0.011 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++VG + + E+ L F P G + +I+++ + +G S+GYGF+ F A+K Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 38.5 bits (88), Expect = 0.011 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++VG + + E+ L F P G + +I+++ + +G S+GYGF+ F A+K Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 38.5 bits (88), Expect = 0.011 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + + + F P G + +V+++ +G S+GYGFV F++ AE Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 38.5 bits (88), Expect = 0.011 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G V++I+V R+ + S GY +V F A AE+ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 38.1 bits (87), Expect = 0.015 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 M + L+S F G + T +++R+ +G S GYGFV+F S A A Sbjct: 89 MQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADA 132
>NOP12_KLULA (Q6CKV6) Nucleolar protein 12| Length = 524 Score = 38.1 bits (87), Expect = 0.015 Identities = 16/60 (26%), Positives = 34/60 (56%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D+ R+++VG+ + E L F P G++ +++IR+ + + +G+ +V+F S K Sbjct: 356 DKRRSVFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSK 415
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 38.1 bits (87), Expect = 0.015 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L S F GEV + K+IR++ +G S GYGFV + + AE+ Sbjct: 31 MTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76 Score = 35.8 bits (81), Expect = 0.074 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFV 498 DE L FGP G V +KVIR+ ++ +G+GFV Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 290
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 37.7 bits (86), Expect = 0.020 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHA 516 ++VG+ + +D + L F G+VV+ +V+ +R +G S G+GFV S + Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSES 201 Score = 36.6 bits (83), Expect = 0.044 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E ++VG+ Y +D L F +G V +VI NR + S G+GFV + AEK Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 111
>NOP12_YEAST (Q08208) Nucleolar protein 12| Length = 459 Score = 37.7 bits (86), Expect = 0.020 Identities = 17/60 (28%), Positives = 34/60 (56%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D+ R+I+VG+ + E L F P G++ +++IR+ + + +G+ +V+F S K Sbjct: 276 DKKRSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNK 335
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 37.7 bits (86), Expect = 0.020 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 +VG + D+ L + F G+V+ K+I +R +G S G+GFV F Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTF 56
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 37.7 bits (86), Expect = 0.020 Identities = 18/59 (30%), Positives = 35/59 (59%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++R+I+VG+ + + F G++ I ++ +R++G +GYG++EF S A EK Sbjct: 62 DSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREK 120
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 37.7 bits (86), Expect = 0.020 Identities = 19/52 (36%), Positives = 33/52 (63%) Frame = +1 Query: 373 GDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 G P + D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+K Sbjct: 68 GLPPHTTDQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQK 118 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 MDE L + P G+V++ +++R+ SG S G GF S E Sbjct: 152 MDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCE 195
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 37.4 bits (85), Expect = 0.026 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 ++VG + E L S F G+V+ ++V R++ +G S+GYGFVEF Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEF 93
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 37.0 bits (84), Expect = 0.033 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD + E L+ F P+G +++I+V R+ + S GY ++ F A AE+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67 Score = 32.3 bits (72), Expect = 0.82 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + H S GYGFV F + +A + Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANR 153
>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) Length = 156 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 T++VG+ ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAE 95
>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1) (Cell proliferation-inducing gene 55 protein) Length = 156 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 T++VG+ ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAE 95
>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2| Length = 156 Score = 37.0 bits (84), Expect = 0.033 Identities = 17/55 (30%), Positives = 32/55 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 T++VG+ ++ E ++ F SG++ I + ++ + G+ FVE+YS A AE Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAE 95
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 36.6 bits (83), Expect = 0.044 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++++GD + E L+ F P+G +++I+V R+ + S GY ++ F A AE+ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67 Score = 30.8 bits (68), Expect = 2.4 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G++++ KV+ + + S GYGFV F + +A + Sbjct: 110 IDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANR 153
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 36.6 bits (83), Expect = 0.044 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFY 507 ++VG+ Y + E + F G V T K++ + +G +GYGF EF+ Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFF 56
>DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protein) (zDazl)| Length = 229 Score = 36.6 bits (83), Expect = 0.044 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 T++VG +DEN + F G V +K+I R G+ +GYGFV F Sbjct: 48 TLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYR-GGICKGYGFVYF 94
>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap| binding protein) (NCBP 20 kDa subunit) (CBP20) (Fragment) Length = 148 Score = 36.6 bits (83), Expect = 0.044 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 T++VG+ ++ E +H F SG+V I + ++ + G+ FVE+Y+ A A Sbjct: 33 TLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADA 86
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 36.2 bits (82), Expect = 0.057 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG Y + L F G++ VI +R +G S GYGFV A+AE+ Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAER 67
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 36.2 bits (82), Expect = 0.057 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + L + F GE++ KVI +R +G S G+GFV F S S Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENS 61
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 36.2 bits (82), Expect = 0.057 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +++G DE+ L F V +V+ N+ +G S GYGFV F S SA Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSA 85
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 36.2 bits (82), Expect = 0.057 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + + L F G+V+ KVI +R +G S G+GFV F S S Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQS 61
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 36.2 bits (82), Expect = 0.057 Identities = 19/52 (36%), Positives = 32/52 (61%) Frame = +1 Query: 373 GDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 G P D++ + C P G++V+ K I ++ + +GYGFV+F S A+A+K Sbjct: 68 GLPPNTTDQDLVKLC-QPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQK 118 Score = 32.3 bits (72), Expect = 0.82 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 MDE L + P G+V++ +V+R+ SG S G GF S E Sbjct: 152 MDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCE 195
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 36.2 bits (82), Expect = 0.057 Identities = 16/55 (29%), Positives = 31/55 (56%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++VG + + E+ L F P G++ I ++++ +G S+GYGF+ F A + Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARR 319
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 36.2 bits (82), Expect = 0.057 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +1 Query: 400 NYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 N LHS F GEV+ K+I +R + S G+GFV F Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTF 35
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ + +G+GFV ++ A Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEA 338 Score = 33.9 bits (76), Expect = 0.28 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + + F G ++T +++ ++ +GVS G GF+ F AE+ Sbjct: 136 MSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEE 181
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 DE+ L FGP G V +KVIR+ + +G+GFV ++ A Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEA 338 Score = 33.1 bits (74), Expect = 0.48 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + + F G ++T +++ ++ +GVS G GF+ F AE+ Sbjct: 136 MSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 181
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 35.8 bits (81), Expect = 0.074 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFV 498 ++VG+ + +D L F G+VV +V+ +R +G S G+GFV Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFV 290
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +DE + S F G V ++ R++ +G S+GY FVEF S A+ Sbjct: 56 LDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAK 100
>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12| Length = 509 Score = 35.8 bits (81), Expect = 0.074 Identities = 16/60 (26%), Positives = 31/60 (51%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D R ++VG + E L F G+V ++++R+ + V +G+ +V+F S E+ Sbjct: 271 DHKRCVFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQ 330
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 35.4 bits (80), Expect = 0.097 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +D L+ F G +++ KV+ + H S GYGFV F +H +A + Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANR 153 Score = 34.3 bits (77), Expect = 0.22 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++++GD + E L+ F P+G +++I+V R+ + S Y ++ F A AE+ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAER 67
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 35.4 bits (80), Expect = 0.097 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 +VG + ++ L F G+V+ K+I +R SG S G+GFV F Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTF 54
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 35.4 bits (80), Expect = 0.097 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VG+ +DE L+ F G++V + +G S+GYGFV + S +A+ Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETAD 154
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 35.0 bits (79), Expect = 0.13 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG Y + L F G++ VI +R +G S GYGFV A+A++ Sbjct: 34 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADR 88
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 35.0 bits (79), Expect = 0.13 Identities = 17/45 (37%), Positives = 30/45 (66%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D++ + C P G++V+ K I ++ + +GYGFV+F S +SA+K Sbjct: 71 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQK 114 Score = 31.6 bits (70), Expect = 1.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 MDE L P G+V++ +++R+ SG S G GF S E Sbjct: 148 MDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCE 191
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VGD ++E+ L F +G V++I+V R+ + S GY +V F A AE+ Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAER 58 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +D ++ F G +++ KV + G S+GYGFV F + +A Sbjct: 101 IDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAA 143
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 34.7 bits (78), Expect = 0.17 Identities = 17/59 (28%), Positives = 33/59 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++ TI+VG + E+ L +G VV++ + ++R + +G+GFVEF A+ Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 34.7 bits (78), Expect = 0.17 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + + L F GEV+ K+I +R +G S G+GFV F S Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKS 59
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 34.3 bits (77), Expect = 0.22 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 DE ++VG + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 34.3 bits (77), Expect = 0.22 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 DE ++VG + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 34.3 bits (77), Expect = 0.22 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +1 Query: 385 YWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 Y N L F G++ + + R+++S S+G+GFV FY AE Sbjct: 28 YQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAE 74
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 34.3 bits (77), Expect = 0.22 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 367 WVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHAS 519 +VG + ++ L F G++ K+I +R +G S G+GFV F S Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKS 59
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 34.3 bits (77), Expect = 0.22 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 DE ++VG + + L S F GEVV +++++ + S G+GFV+F Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 33.9 bits (76), Expect = 0.28 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF-------- 504 D +T++V Y E+ L F G + I ++ N+ SG GY F+E+ Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHS 159 Query: 505 -YSHASAEK 528 Y HA +K Sbjct: 160 AYKHADGKK 168
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 33.9 bits (76), Expect = 0.28 Identities = 16/45 (35%), Positives = 30/45 (66%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D++ + C P G++V+ K I ++ + +GYGFV+F S ++A+K Sbjct: 69 DQDLVKLC-QPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQK 112 Score = 31.6 bits (70), Expect = 1.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 MDE L P G+V++ +++R+ SG S G GF S E Sbjct: 146 MDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCE 189
>HSH49_YEAST (Q99181) Protein HSH49| Length = 213 Score = 33.5 bits (75), Expect = 0.37 Identities = 16/59 (27%), Positives = 30/59 (50%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 D T++VG+ + + L+ F V+ IK +++ +GY F+EFY+ A+ Sbjct: 6 DSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQ 64
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 R ++VG +D+ LH+ F P G++ I++ + + G+ FVEF Sbjct: 6 RVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEF 54
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 R ++VG +D+ LH+ F P G++ I++ + + G+ FVEF Sbjct: 6 RVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEF 54
>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1| Length = 476 Score = 33.5 bits (75), Expect = 0.37 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +1 Query: 388 WMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 + E+ L F P G++ I V+R++H+ S+G FV+F + A Sbjct: 35 YTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQA 79 Score = 28.9 bits (63), Expect = 9.1 Identities = 17/58 (29%), Positives = 32/58 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +E I+V P+ + +E+ L F G++ VI+N+ +G S+G G+V + + A Sbjct: 118 EELTRIFVMIPKSYTEED-LREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQA 174
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 33.5 bits (75), Expect = 0.37 Identities = 18/59 (30%), Positives = 30/59 (50%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 D+ ++VGD +D+ L + F ++ V+ + +G S GYGFV F S A+ Sbjct: 158 DDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQ 216
>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) Length = 317 Score = 33.1 bits (74), Expect = 0.48 Identities = 14/54 (25%), Positives = 32/54 (59%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++G + E+++++ G++ ++ R++ +G S+GY FVEF S A+ Sbjct: 49 VYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAK 102
>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 33.1 bits (74), Expect = 0.48 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 E+ L F P G++ I V+R++H+ S+G FV+F + A Sbjct: 38 ESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQA 79
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 32.7 bits (73), Expect = 0.63 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L++ F G + T +++R+ +G S GY FV+F S +++ Sbjct: 138 MTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQR 183
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 32.7 bits (73), Expect = 0.63 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L++ F G + T +++R+ +G S GY FV+F S +++ Sbjct: 136 MTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQR 181
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 32.7 bits (73), Expect = 0.63 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLH---SCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS--HA 516 E ++VG + DE L S FGP EVV V+++R + S G+GF+ F + HA Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVV---VVKDRETQRSRGFGFITFTNPEHA 60 Query: 517 S 519 S Sbjct: 61 S 61
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 32.7 bits (73), Expect = 0.63 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLH---SCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS--HA 516 E ++VG + DE L S FGP EVV V+++R + S G+GF+ F + HA Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVV---VVKDRETQRSRGFGFITFTNPEHA 60 Query: 517 S 519 S Sbjct: 61 S 61
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 32.7 bits (73), Expect = 0.63 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHA 516 +I+VG+ Y + E L + F G V +++ +R +G G+GFVE + A Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADA 53
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 32.7 bits (73), Expect = 0.63 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +E L FGP G V ++K++++ + +GYGFV ++ A Sbjct: 414 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEA 456
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 32.7 bits (73), Expect = 0.63 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 9/69 (13%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF-------- 504 D RT+++ Y E+ L F G + I +I ++ SG +GY F+E+ Sbjct: 99 DPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHA 158 Query: 505 -YSHASAEK 528 Y HA +K Sbjct: 159 AYKHADGKK 167
>NOP12_DEBHA (Q6BTS9) Nucleolar protein 12| Length = 462 Score = 32.7 bits (73), Expect = 0.63 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPS--GEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 D RTI+VG+ + E L F +V +++VIR+ + V +G+ V+F S Sbjct: 263 DNKRTIFVGNLDFEEKEETLWRYFNSKTDNDVESVRVIRDAKTNVGKGFALVQFKDTLSV 322 Query: 523 EK 528 K Sbjct: 323 NK 324
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 32.7 bits (73), Expect = 0.63 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +E L FGP G V ++K++++ + +GYGFV ++ A Sbjct: 450 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEA 492
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 32.7 bits (73), Expect = 0.63 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 L F G++++ +VIR++ +G S Y F+EF + S EK Sbjct: 260 LELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEK 300
>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 605 Score = 32.3 bits (72), Expect = 0.82 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 L FG G++++ +VIR++ +G S Y F+E+ AS E Sbjct: 267 LELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASCE 306
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 32.3 bits (72), Expect = 0.82 Identities = 20/79 (25%), Positives = 34/79 (43%) Frame = +1 Query: 292 PQASVTXXXXXXXXXXXXXDENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHS 471 P+A + ++ ++VG + + L F GEVV + + ++ Sbjct: 46 PRAGIRTAPRDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNT 105 Query: 472 GVSEGYGFVEFYSHASAEK 528 G S G+GF+ F AS EK Sbjct: 106 GRSRGFGFILFKDAASVEK 124
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 32.3 bits (72), Expect = 0.82 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 + ++VG + M+EN L F G VV+ ++ ++ + G+ FVEF + +K Sbjct: 108 KKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDK 164 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 R +++G Y + L F GE+V + V+++ + S G+GF+ + Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 65
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 32.3 bits (72), Expect = 0.82 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 I+V + E L F G++ +++ RN+ +G S YGF+EF + A Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDA 145
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 32.3 bits (72), Expect = 0.82 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 M + L++ F G + T +++++ +G S GY FV+F S A+ Sbjct: 113 MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQ 157
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 32.3 bits (72), Expect = 0.82 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 M + L++ F G + T +++++ +G S GY FV+F S A+ Sbjct: 96 MTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQ 140
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +1 Query: 355 NRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 +R +++G Y E + G V+ +K++ + +G S+GY F+EF Sbjct: 17 SRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEF 66
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 LH F G +++ +VIR++ +G S Y F+EF + E+ Sbjct: 264 LHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQ 304
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF-------- 504 D +T++V Y E+ L F G + I ++ ++ SG GY F+E+ Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159 Query: 505 -YSHASAEK 528 Y HA +K Sbjct: 160 AYKHADGKK 168
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF-------- 504 D +T++V Y E+ L F G + I ++ ++ SG GY F+E+ Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159 Query: 505 -YSHASAEK 528 Y HA +K Sbjct: 160 AYKHADGKK 168
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 32.0 bits (71), Expect = 1.1 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 I+VG E L F G V + K+I +R +GVS+GYGFV F + A++ Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQR 88
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/46 (28%), Positives = 27/46 (58%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 M + L++ F G + T +++R+ +G S GY FV+F + +++ Sbjct: 121 MTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQR 166
>NOP12_ASPFU (Q4WCH5) Nucleolar protein 12| Length = 538 Score = 31.6 bits (70), Expect = 1.4 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = +1 Query: 430 GEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 G V +++V+R+R + V +G+ +V+FY E+ Sbjct: 379 GNVESVRVVRDRTTRVGKGFAYVQFYDQVCVEE 411
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 ++ RTI+VG + E L++ F P G++ I++ + S G+ F+E+ Sbjct: 3 NDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEY 54
>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 E L F P G++ I V+R++H+ S+G FV+F + A Sbjct: 38 ELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQA 79
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++G + + L FG GEV V+R+ + S G+GFV F A +K Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++G + + L FG GEV V+R+ + S G+GFV F A +K Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++G + + L FG GEV V+R+ + S G+GFV F A +K Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
>NOP12_EMENI (Q5BDC8) Nucleolar protein 12| Length = 520 Score = 31.6 bits (70), Expect = 1.4 Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +1 Query: 421 GPSGE--VVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 GP+G V +++V+R+R + V +G+ +V+FY E+ Sbjct: 360 GPAGRGNVESVRVVRDRSTRVGKGFAYVQFYDQNCVEE 397
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 I++G + E L F G V +++ R++ +G S+GY +VEF Sbjct: 43 IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEF 89
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYS 510 D ++V + + + L F ++ KVI +R SG S G+GF+ F S Sbjct: 214 DSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSS 267
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 31.2 bits (69), Expect = 1.8 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 19/69 (27%) Frame = +1 Query: 379 PQYWMDENYLHSCFGPSGEVVTIKVI-----RNRHS--------------GVSEGYGFVE 501 P W DE+ L+ + GE++++KVI +N++ G S GYGFV Sbjct: 548 PLSWTDED-LYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVS 606 Query: 502 FYSHASAEK 528 F S A K Sbjct: 607 FESPLDAAK 615
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 L F G++++ +V+R++ SG S Y F+EF +AE+ Sbjct: 262 LELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQ 302
>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein| crp79) (Poly(A)-binding protein) (PABP) (Meiotic expression up-regulated protein 5) Length = 710 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 ++ L F P G +++ + +SG+S+GYGFV F Sbjct: 397 KSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAF 432
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +1 Query: 361 TIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++VG+ + E L F G V +I+V R+ + S GY +V F++ EK Sbjct: 81 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEK 136 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 +D LH F G++++ KV + G ++GYGFV F S SA Sbjct: 179 IDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESA 221
>NOP12_CANAL (Q5AHI7) Nucleolar protein 12| Length = 454 Score = 30.8 bits (68), Expect = 2.4 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +1 Query: 349 DENRTIWVGDPQYWMDENYLHSCFGPS--GEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 D RTI+VG+ + E L F +V ++++IR+ + + +G+ V+F S Sbjct: 262 DNKRTIFVGNLDFEEKEETLWKYFNSKLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSV 321 Query: 523 EK 528 K Sbjct: 322 NK 323
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 30.8 bits (68), Expect = 2.4 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 L F G++++ +VIR++ +G S Y F+EF S E+ Sbjct: 264 LELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQ 304
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E L F GEV+ ++V ++ +G S+G+GFV F + + K Sbjct: 117 EQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E L F GEV+ ++V ++ +G S+G+GFV F + + K Sbjct: 117 EQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
>NOP12_GIBZE (Q4IQW0) Nucleolar protein 12| Length = 559 Score = 30.8 bits (68), Expect = 2.4 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 E L F G+V ++V+R+ + V +G+ +V+FY E Sbjct: 365 EEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQFYDANDVE 407
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 ++VG + + L F GEVV + + ++G S G+GF+ F +S EK Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 30.4 bits (67), Expect = 3.1 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E++T+ + + Y E L F + IKV +N H G S+GY F+EF S A++ Sbjct: 486 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNPH-GKSKGYAFIEFASFEDAKE 540 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 598 VRARIVTDRETGSSKGFGFVDFNSEEDAK 626
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 ++VGD + E+ L+ F P+G + ++ R+ + GYG+V F A AE Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAE 73
>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)| Length = 165 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASA 522 E+ + F GE+ I + +R +G S+GY VE+ +H A Sbjct: 86 EDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQA 127
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 I++G + E L F G V +++ R++ +G S+GY +VE+ Sbjct: 43 IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEY 89
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++G + + L F GE+ V+R+ + S G+GFV F AS +K Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +1 Query: 391 MDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +D L F G +++ KV + +G S+GYGFV+F SA+ Sbjct: 147 IDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQ 190
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 29.6 bits (65), Expect = 5.3 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +1 Query: 364 IWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 +++G + + L F GE+ V+R+ + S G+GFV F AS +K Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 355 NRTIWVGDPQYWMDENYLHSCF-GPSGEVVTIKVIRNRHSGVSEGYGFVEF 504 N +I+VGD + E+ L F K++ ++ +G+S+GYGFV+F Sbjct: 162 NCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKF 212
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 406 LHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 L F G++++ +VIR++ +G S Y F+EF S E+ Sbjct: 269 LELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEE 309
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = +1 Query: 427 SGEVVTIKVI---RNRHSGVSEGYGFVEFYSHASA 522 SG V KVI + +G S GYGFVEF H +A Sbjct: 532 SGVVKQAKVIMEVKGSTAGRSRGYGFVEFRDHKNA 566
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 R +WV L S F G+V+ KV+ N S + YGFV + A K Sbjct: 451 RNLWVSGLSSSTRAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATK 507
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 592 VRARIVTDRETGSSKGFGFVDFNSEEDAK 620
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAK 623
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +1 Query: 394 DENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 D + S FGP +++ +VIR++ +G S Y F+EF + E+ Sbjct: 263 DLQLIFSRFGP---ILSCEVIRDKRTGDSLQYAFIEFENQKDCEQ 304
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 597 VRARIVTDRETGSSKGFGFVDFNSEEDAK 625 Score = 28.9 bits (63), Expect = 9.1 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E++T+ + + Y E L F + IKV +N++ G S+GY F+EF S A++ Sbjct: 485 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKE 539
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 R +WV L + F G+VV KV+ N S + YGFV + A K Sbjct: 407 RNLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATK 463
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 596 VRARIVTDRETGSSKGFGFVDFNSEEDAK 624 Score = 28.9 bits (63), Expect = 9.1 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E++T+ + + Y E L F + IKV +N++ G S+GY F+EF S A++ Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKE 538
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 Query: 439 VTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 V +++ +R +G S+G+GFV+F S A+ Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAK 623 Score = 28.9 bits (63), Expect = 9.1 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 E++T+ + + Y E L F + IKV +N++ G S+GY F+EF S A++ Sbjct: 483 ESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQN-GKSKGYAFIEFASFEDAKE 537
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/58 (27%), Positives = 32/58 (55%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++T++V E L F S ++ +++ +R +G S+G+GFV+F S A+ Sbjct: 551 QSKTLFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAK 605 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/57 (31%), Positives = 34/57 (59%) Frame = +1 Query: 358 RTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEK 528 RT++V + Y + E+ + + F + EV +++ N+ G S+G ++EF + A AEK Sbjct: 371 RTLFVKNLPYRVTEDEMKNVFENALEV---RLVLNKE-GSSKGMAYIEFKTEAEAEK 423
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +1 Query: 352 ENRTIWVGDPQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 +++T++V E L F S V +++ +R +G S+G+GFV+F + A+ Sbjct: 500 QSKTLFVRGLSEDTTEETLKEAFDGS---VNARIVTDRDTGASKGFGFVDFSTAEDAK 554
>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) Length = 174 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 E +H F GE+ I + +R +G +GY VE+ ++ A+ Sbjct: 86 EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQ 128
>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1-1) (BOV-1) Length = 174 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +1 Query: 397 ENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAE 525 E +H F GE+ I + +R +G +GY VE+ ++ A+ Sbjct: 86 EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQ 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.130 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,617,047 Number of Sequences: 219361 Number of extensions: 509424 Number of successful extensions: 1447 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 1343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1435 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
