ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30h01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative carnitine/acylcarnitine translocase (OSJNBa0003O19.7), mRNA Length = 1580 Score = 149 bits (75), Expect = 1e-32 Identities = 294/367 (80%) Strand = Plus / Plus Query: 183 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 242 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 142 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 201 Query: 243 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 302 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 202 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 261 Query: 303 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 362 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 262 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 321 Query: 363 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 422 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 322 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 381 Query: 423 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 482 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 382 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 441 Query: 483 gcatgcccaacagagctgattaagtgcaggttgcaggcccagagctctttagctgaagca 542 || |||||||| ||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 442 gcttgcccaactgagctcatcaagtgcaggttgcaggcccagagtgctttagccgaggca 501 Query: 543 ggtgctg 549 | ||||| Sbjct: 502 gctgctg 508
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 4e-23 Identities = 263/331 (79%) Strand = Plus / Minus Query: 183 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 242 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 22259914 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 22259855 Query: 243 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 302 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 22259854 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 22259795 Query: 303 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 362 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 22259794 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 22259735 Query: 363 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 422 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 22259734 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 22259675 Query: 423 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 482 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 22259674 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 22259615 Query: 483 gcatgcccaacagagctgattaagtgcaggt 513 || |||||||| ||||| || |||||||||| Sbjct: 22259614 gcttgcccaactgagctcatcaagtgcaggt 22259584 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 22256762 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 22256703 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 22256702 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 22256643 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 22256642 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 22256583 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 22256582 ctcttcaccgtcaggggccagatggaggc 22256554 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 507 tgcaggttgcaggcccagagctctttagctgaagcaggtgctg 549 |||||||||||||||||||| ||||||| || |||| ||||| Sbjct: 22258376 tgcaggttgcaggcccagagtgctttagccgaggcagctgctg 22258334
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 117 bits (59), Expect = 4e-23 Identities = 263/331 (79%) Strand = Plus / Minus Query: 183 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 242 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 77157 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 77098 Query: 243 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 302 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 77097 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 77038 Query: 303 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 362 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 77037 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 76978 Query: 363 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 422 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 76977 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 76918 Query: 423 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 482 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 76917 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 76858 Query: 483 gcatgcccaacagagctgattaagtgcaggt 513 || |||||||| ||||| || |||||||||| Sbjct: 76857 gcttgcccaactgagctcatcaagtgcaggt 76827 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 74005 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 73946 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 73945 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 73886 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 73885 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 73826 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 73825 ctcttcaccgtcaggggccagatggaggc 73797 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 507 tgcaggttgcaggcccagagctctttagctgaagcaggtgctg 549 |||||||||||||||||||| ||||||| || |||| ||||| Sbjct: 75619 tgcaggttgcaggcccagagtgctttagccgaggcagctgctg 75577
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 4e-23 Identities = 263/331 (79%) Strand = Plus / Minus Query: 183 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 242 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 22271982 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 22271923 Query: 243 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 302 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 22271922 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 22271863 Query: 303 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 362 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 22271862 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 22271803 Query: 363 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 422 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 22271802 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 22271743 Query: 423 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 482 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 22271742 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 22271683 Query: 483 gcatgcccaacagagctgattaagtgcaggt 513 || |||||||| ||||| || |||||||||| Sbjct: 22271682 gcttgcccaactgagctcatcaagtgcaggt 22271652 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Minus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 22268830 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 22268771 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 22268770 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 22268711 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 22268710 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 22268651 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 22268650 ctcttcaccgtcaggggccagatggaggc 22268622 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 507 tgcaggttgcaggcccagagctctttagctgaagcaggtgctg 549 |||||||||||||||||||| ||||||| || |||| ||||| Sbjct: 22270444 tgcaggttgcaggcccagagtgctttagccgaggcagctgctg 22270402
>ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative carnitine/acylcarnitine translocase (OSJNBa0003O19.8), mRNA Length = 1105 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 67 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 126 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 127 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 186 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 187 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 246 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 247 ctcttcaccgtcaggggccagatggaggc 275 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 471 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 527 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 352 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 408
>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full insert sequence Length = 1209 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 171 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 230 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 231 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 290 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 291 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 350 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 351 ctcttcaccgtcaggggccagatggaggc 379 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 471 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 527 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 456 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 512
>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full insert sequence Length = 1230 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 190 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 249 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 250 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 309 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 310 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 369 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 370 ctcttcaccgtcaggggccagatggaggc 398 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 471 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 527 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 475 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 531
>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full insert sequence Length = 1230 Score = 89.7 bits (45), Expect = 9e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 186 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 245 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 190 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 249 Query: 246 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 305 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 250 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 309 Query: 306 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 365 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 310 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 369 Query: 366 ctgttcactgtgaggggccaaatggaggc 394 || ||||| || |||||||| |||||||| Sbjct: 370 ctcttcaccgtcaggggccagatggaggc 398 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 471 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 527 ||||| ||||||||||| || || ||||| || |||||||||||||| ||||||||| Sbjct: 475 gtctcgttcctggcatgtcccactgagctcatcaagtgcaggttgcaagcccagagc 531
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381, complete sequence Length = 80655 Score = 85.7 bits (43), Expect = 1e-13 Identities = 172/215 (80%) Strand = Plus / Minus Query: 180 gttggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctcca 239 ||||| |||||||||||||| ||||||||||||||||| |||||||| | || ||| Sbjct: 37883 gttggacacccatttgacacaatcaaggtcaagctccaaagccagcctacaccaatccca 37824 Query: 240 ggccagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaa 299 |||||||| || | ||| | || || |||||||||||||||| ||| | || ||||| Sbjct: 37823 ggccagcttcccagatattctggtgcaattgatgctgtcaagcagacactagcagctgag 37764 Query: 300 gggccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaac 359 || || ||||| || || || || ||||| ||||| || ||||| || || ||||| ||| Sbjct: 37763 ggcccaaggggtttatacaaaggtatgggtgctccacttgctacagtagccgccttaaac 37704 Query: 360 gctctcctgttcactgtgaggggccaaatggaggc 394 ||| ||||||| || || ||||| ||||||||||| Sbjct: 37703 gctgtcctgtttacggttagggggcaaatggaggc 37669 Score = 77.8 bits (39), Expect = 3e-11 Identities = 171/215 (79%) Strand = Plus / Minus Query: 180 gttggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctcca 239 ||||| |||||||||||||| ||||||||||||||||| |||||||| | || || Sbjct: 31430 gttggacacccatttgacacaatcaaggtcaagctccaaagccagccaacaccaatccct 31371 Query: 240 ggccagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaa 299 |||||||| || | |||| | || || |||||||||||||||| ||| | || |||||| Sbjct: 31370 ggccagcttccaaggtattctggtgcaattgatgctgtcaagcagacactagcagctgaa 31311 Query: 300 gggccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaac 359 || || ||||| || || || || | ||| ||||| || ||||| || || ||||||||| Sbjct: 31310 ggcccaaggggcttatacaaaggtaggggtgctccacttgctacagtagccgccttcaac 31251 Query: 360 gctctcctgttcactgtgaggggccaaatggaggc 394 ||| ||| || || || ||||| ||||||||||| Sbjct: 31250 gctgccctatttacggttagggggcaaatggaggc 31216
>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182, complete sequence Length = 80583 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 180 gttggccacccatttgacaccatcaaggtcaagctccagagccagcc 226 ||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 78518 gttggacacccctttgacaccatcaaggtcaagctccaaagccagcc 78472 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 267 tttgatgctgtcaagcaaacagttgcggctgaagggccgaggggattgtataagggaatg 326 |||||||| |||||||| ||| | || |||||||| |||||||| || | || || ||| Sbjct: 78431 tttgatgccgtcaagcagacaatagcagctgaaggtccgaggggtttattcaaaggtatg 78372 Query: 327 ggggctcctctcgctaccgtcgcagccttcaacgctctcctgttcactgtgaggggccaa 386 || || || || ||||| || ||||||||||| ||| ||||||| || |||||||| ||| Sbjct: 78371 ggtgccccgcttgctacggtagcagccttcaatgctgtcctgtttacagtgaggggacaa 78312 Query: 387 atgga 391 ||||| Sbjct: 78311 atgga 78307
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 432 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 491 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 14997735 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 14997794 Query: 492 acagagctgattaagtgcaggt 513 || ||||| || ||||| |||| Sbjct: 14997795 actgagctcatcaagtgtaggt 14997816
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 432 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 491 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 3639 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 3698 Query: 492 acagagctgattaagtgcaggt 513 || ||||| || ||||| |||| Sbjct: 3699 actgagctcatcaagtgtaggt 3720
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 60.0 bits (30), Expect = 8e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 432 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 491 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 137905 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 137964 Query: 492 acagagctgattaagtgcaggt 513 || ||||| || ||||| |||| Sbjct: 137965 actgagctcatcaagtgtaggt 137986
>ref|NM_124051.3| Arabidopsis thaliana BOU (A BOUT DE SOUFFLE); binding / transporter AT5G46800 (BOU) mRNA, complete cds Length = 1323 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 330 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 376 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 465 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 524 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 525 actgtgagaggtcaaatgga 544
>gb|BT011849.1| Arabidopsis thaliana At5g46800 mRNA sequence Length = 900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 55 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 101 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 190 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 249 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 250 actgtgagaggtcaaatgga 269
>gb|AY136374.2| Arabidopsis thaliana carnitine/acylcarnitine translocase-like protein (At5g46800) mRNA, complete cds Length = 1255 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 314 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 360 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 449 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 508 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 509 actgtgagaggtcaaatgga 528
>gb|BT000165.1| Arabidopsis thaliana carnitine/acylcarnitine translocase-like protein (At5g46800) mRNA, complete cds Length = 967 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 58 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 104 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 193 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 252 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 253 actgtgagaggtcaaatgga 272
>emb|BX829608.1|CNS0A1F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1281 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 336 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 382
>emb|BX830863.1|CNS0A0US Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1274 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 315 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 361 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 450 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 509 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 510 actgtgagaggtcaaatgga 529
>emb|BX830676.1|CNS0A0SP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1255 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 306 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 352 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 441 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 500 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 501 actgtgagaggtcaaatgga 520
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 71728 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 71682 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 71593 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 71534 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 71533 actgtgagaggtcaaatgga 71514
>emb|AJ277732.1|ATH277732 Arabidopsis thaliana mRNA for carnitine acyl carrier-like protein (bou gene) Length = 1149 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 206 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 252 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 341 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 400 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 401 actgtgagaggtcaaatgga 420
>emb|BX831435.1|CNS0A0QE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1260 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 311 gttgttggtcatccatttgagactatcaaggtcaaacttcagagcca 357 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 446 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 505 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 506 actgtgagaggtcaaatgga 525
>gb|AY088995.1| Arabidopsis thaliana clone 13730 mRNA, complete sequence Length = 1146 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 223 |||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 152 gttgttggtcatccatttgacacaatcaaagtcaaacttcagagcca 198
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 193 ttgacaccatcaaggtcaagctcca 217 ||||||||||||||| ||||||||| Sbjct: 151217 ttgacaccatcaaggacaagctcca 151193
>ref|XM_659189.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6677.2), mRNA Length = 606 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 atttgacaccatcaaggtcaagctc 215 ||||||||||||||||||| ||||| Sbjct: 556 atttgacaccatcaaggtctagctc 532
>ref|XM_571305.1| Cryptococcus neoformans var. neoformans JEC21 UMP-CMP kinase (CNF00400) partial mRNA Length = 932 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 ttgacaccatcaaggtcaagctcca 217 ||||||||||||||| ||||||||| Sbjct: 38 ttgacaccatcaaggacaagctcca 62
>emb|AL031883.1|DMC11F6 Drosophila melanogaster cosmid clone 11F6 Length = 36000 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 gccttcaacgctctcctgttcactg 375 |||||| |||||||||||||||||| Sbjct: 20319 gccttcgacgctctcctgttcactg 20343
>gb|AE005983.1| Caulobacter crescentus CB15 section 309 of 359 of the complete genome Length = 13041 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 tgtcgctggtgctggtgccgg 463 ||||||||||||||||||||| Sbjct: 11742 tgtcgctggtgctggtgccgg 11762
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 gccttcaacgctctcctgttcactg 375 |||||| |||||||||||||||||| Sbjct: 67858 gccttcgacgctctcctgttcactg 67882
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence Length = 136530 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctcccccctcccactcctcacc 42 ||||||||||||||| ||||||||| Sbjct: 112260 ctcctcccccctcccgctcctcacc 112284
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 gccttcaacgctctcctgttcactg 375 |||||| |||||||||||||||||| Sbjct: 51225 gccttcgacgctctcctgttcactg 51249
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cccaatcactcctcccccctcccactcc 37 ||||| ||||||||| |||||||||||| Sbjct: 142109 cccaaccactcctccaccctcccactcc 142136
>ref|XM_361878.1| Magnaporthe grisea 70-15 hypothetical protein (MG10955.4) partial mRNA Length = 2718 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 gtcgctggtgctggtgccgg 463 |||||||||||||||||||| Sbjct: 2316 gtcgctggtgctggtgccgg 2297
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gctggtgctggtgccgggct 466 |||||||||||||||||||| Sbjct: 2859666 gctggtgctggtgccgggct 2859685
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 caggcccgccgctgctgcaccgtc 83 ||||||||||||||||||| |||| Sbjct: 4228037 caggcccgccgctgctgcaacgtc 4228060
>gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, complete sequence Length = 183663 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agggaatgggggctcctctc 338 |||||||||||||||||||| Sbjct: 145272 agggaatgggggctcctctc 145291
>ref|XM_389750.1| Gibberella zeae PH-1 chromosome 4 EF2_NEUCR Elongation factor 2 (EF-2) (Colonial temperature-sensitive 3) (FG09574.1) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 agcaggttgtcgctggtgctggtg 459 |||| ||||||||||||||||||| Sbjct: 1547 agcacgttgtcgctggtgctggtg 1570
>emb|AL365272.20| Human DNA sequence from clone RP11-328C17 on chromosome 6 Contains the gene for mitogen-activated protein kinase phosphatase X (MKPX), the 5' end of the IRF4 gene for interferon regulatory factor 4 and 2 CpG islands, complete sequence Length = 132449 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 80462 gcccagccctgctccaggcc 80481
>gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence Length = 183718 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcccccctcccactcc 37 |||||||||||||||||||| Sbjct: 120646 ctcctcccccctcccactcc 120627
>emb|AL031846.2|HS742C19 Human DNA sequence from clone RP4-742C19 on chromosome 22q12.3-13.1, complete sequence Length = 122748 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cccagccctgctccaggcca 244 |||||||||||||||||||| Sbjct: 117482 cccagccctgctccaggcca 117463
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 agcagcaggttgtcgctggtgctggtgc 460 |||||||| |||||||||||| |||||| Sbjct: 57073 agcagcagtttgtcgctggtgatggtgc 57046
>dbj|AK093183.1| Homo sapiens cDNA FLJ35864 fis, clone TESTI2007657, highly similar to Homo sapiens mitogen-activated protein kinase phosphatase x (MKPX) mRNA Length = 2835 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 1256 gcccagccctgctccaggcc 1275
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 gtcgctggtgctggtgccgg 463 |||||||||||||||||||| Sbjct: 93762 gtcgctggtgctggtgccgg 93781
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 gtcgctggtgctggtgccgg 463 |||||||||||||||||||| Sbjct: 36111 gtcgctggtgctggtgccgg 36092
>gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191923 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tgtcgctggtgctggtgccg 462 |||||||||||||||||||| Sbjct: 47122 tgtcgctggtgctggtgccg 47141
>gb|AC092801.2| Homo sapiens chromosome 1 clone RP11-36N20, complete sequence Length = 151199 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tccaacccaatcactcctcc 24 |||||||||||||||||||| Sbjct: 145434 tccaacccaatcactcctcc 145453
>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence Length = 112659 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aggtcaagctccagagccag 224 |||||||||||||||||||| Sbjct: 25193 aggtcaagctccagagccag 25174
>gb|AC156501.3| Mus musculus BAC clone RP23-358M3 from chromosome 14, complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcccccctcccactcc 37 |||||||||||||||||||| Sbjct: 107316 ctcctcccccctcccactcc 107335
>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence Length = 191096 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ccctgctccaggccagctac 249 |||||||||||||||||||| Sbjct: 133542 ccctgctccaggccagctac 133523
>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence Length = 187268 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tccaacccaatcactcctcc 24 |||||||||||||||||||| Sbjct: 121299 tccaacccaatcactcctcc 121280
>emb|BX830831.1|CNS0A0PC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 312 ttgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctcctgttc 371 |||||||| || ||||| ||||| || || ||||| || |||||||| || | ||||| Sbjct: 52 ttgtataaaggtatgggagctccacttgcaaccgttgctgccttcaatgcggttttgttc 111 Query: 372 actgtgaggggccaaatgga 391 |||||||| || |||||||| Sbjct: 112 actgtgagaggtcaaatgga 131
>emb|BX648953.1|HSM809104 Homo sapiens mRNA; cDNA DKFZp686I1848 (from clone DKFZp686I1848) Length = 6626 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 5246 gcccagccctgctccaggcc 5265
>emb|X52073.1|SLTRLYTA S.lividans 66 lysT-alpha gene for transfer RNA-Lys(AAG) Length = 848 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 agcagcaggttgtcgctggtgctggtgc 460 |||||||| |||||||||||| |||||| Sbjct: 391 agcagcagcttgtcgctggtgatggtgc 364
>dbj|AK000383.1| Homo sapiens cDNA FLJ20376 fis, clone HUV01087 Length = 2196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 573 gcccagccctgctccaggcc 592
>dbj|AK074410.1| Homo sapiens cDNA FLJ23830 fis, clone HUV01083 Length = 2196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 573 gcccagccctgctccaggcc 592
>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence Length = 216104 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agggaatgggggctcctctc 338 |||||||||||||||||||| Sbjct: 47784 agggaatgggggctcctctc 47803
>dbj|AB208997.1| Homo sapiens mRNA for dual specificity phosphatase 22 variant protein Length = 2856 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcccagccctgctccaggcc 243 |||||||||||||||||||| Sbjct: 600 gcccagccctgctccaggcc 619 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,447,623 Number of Sequences: 3902068 Number of extensions: 4447623 Number of successful extensions: 95689 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 95390 Number of HSP's gapped (non-prelim): 300 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
