ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30g11 |
|---|---|
| Clone Library Name | barley_pub |
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 258 bits (658), Expect = 1e-68 Identities = 126/164 (76%), Positives = 143/164 (87%), Gaps = 4/164 (2%) Frame = +1 Query: 67 PNSSGSSDSA----EPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRI 234 P +SG + +A + K SPSGL +RE+PGGYGVPFFSPLRDRLDY+YFQGAEEYFRSR+ Sbjct: 5 PVNSGDAAAAATGEKSKLSPSGLPIREIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRV 64 Query: 235 ARNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLF 414 AR+GGATVLRVNMPPGPFI+ N RVVA LDARSF VLLDD+ VDK DTLDGT+MPS LF Sbjct: 65 ARHGGATVLRVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALF 124 Query: 415 GGYRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAFGA 546 GG+RPLAF+DAADPRHA +KRV++SLAAARMHHVAPAFR AF A Sbjct: 125 GGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAA 168
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 255 bits (652), Expect = 5e-68 Identities = 124/162 (76%), Positives = 140/162 (86%), Gaps = 3/162 (1%) Frame = +1 Query: 70 NSSGSSDSA---EPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIAR 240 NS +D A + K SPSGL +RE+PGGYGVPF SPLRDRLDYYYFQGA+E+FRSR+AR Sbjct: 7 NSGDGNDGAVGGQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVAR 66 Query: 241 NGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFGG 420 +GGATVLRVNMPPGPF+ + RVVA LDARSF VLLDD+ VDK DTLDGTFMPSL LFGG Sbjct: 67 HGGATVLRVNMPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGG 126 Query: 421 YRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAFGA 546 +RPLAF+DAADPRHA +KRV++SLAAARMHHVAPAFR AF A Sbjct: 127 HRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAA 168
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 160 bits (405), Expect = 2e-39 Identities = 77/139 (55%), Positives = 100/139 (71%) Frame = +1 Query: 130 REVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITANSRV 309 R VPG YGVPF S +RDRLD+YY QG ++YF SR R G +TV+R+N+PPGPF+ + RV Sbjct: 10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYG-STVVRINVPPGPFMARDPRV 68 Query: 310 VAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMIS 489 VA LDA+SF VL D AKV+K D GTFMPS L GGYR A++D ++P HA +K++++S Sbjct: 69 VALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLS 128 Query: 490 LAAARMHHVAPAFRTAFGA 546 L +R P FR+ FGA Sbjct: 129 LLVSRKDAFVPVFRSNFGA 147
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 152 bits (384), Expect = 6e-37 Identities = 71/154 (46%), Positives = 103/154 (66%) Frame = +1 Query: 79 GSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATV 258 G + P + L +R++PG YG+P P++DRLDY+Y QG EE+F+SR+ + +TV Sbjct: 56 GITSQPPPSSDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYK-STV 114 Query: 259 LRVNMPPGPFITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFGGYRPLAF 438 R NMPPGPFI +N RV+ LDA+SF VL D +KV+K D GT+MPS L GGYR L++ Sbjct: 115 YRANMPPGPFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSY 174 Query: 439 MDAADPRHAALKRVMISLAAARMHHVAPAFRTAF 540 +D ++P H LK+++ +L R +V P F ++F Sbjct: 175 LDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSF 208
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 148 bits (374), Expect = 9e-36 Identities = 68/144 (47%), Positives = 99/144 (68%), Gaps = 1/144 (0%) Frame = +1 Query: 112 PSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGA-EEYFRSRIARNGGATVLRVNMPPGPF 288 PS +RE+PG YG+PFF P++DRL+Y+Y G +EYFRSR+ + +TV R NMPPGPF Sbjct: 3 PSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKY-QSTVFRANMPPGPF 61 Query: 289 ITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAA 468 +++N +V+ LDA+SF +L D +KV+K D GT+MPS L G YR L+++D ++PRHA Sbjct: 62 VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYLDPSEPRHAQ 121 Query: 469 LKRVMISLAAARMHHVAPAFRTAF 540 LK ++ + + V P F T + Sbjct: 122 LKNLLFFMLKNSSNRVIPQFETTY 145
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 144 bits (362), Expect = 2e-34 Identities = 68/140 (48%), Positives = 94/140 (67%) Frame = +1 Query: 121 LSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIARNGGATVLRVNMPPGPFITAN 300 L +R +PG YG+P P++DR DY+Y QGAEE+F+SRI R +TV RVNMPPG FI N Sbjct: 52 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRI-RKYNSTVYRVNMPPGAFIAEN 110 Query: 301 SRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRV 480 +VVA LD +SF VL D KV+K D GT+MPS L GGYR L+++D ++P+H LK + Sbjct: 111 PQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNL 170 Query: 481 MISLAAARMHHVAPAFRTAF 540 + L + + + P F+ + Sbjct: 171 LFFLLKSSRNRIFPEFQATY 190
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 141 bits (356), Expect = 1e-33 Identities = 72/162 (44%), Positives = 98/162 (60%) Frame = +1 Query: 58 SRVPNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSRIA 237 +R S+ ++D E L +R+VPG YG P +RDR +Y+Y G + F + Sbjct: 24 TRASASASATDRQEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARV 83 Query: 238 RNGGATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTFMPSLVLFG 417 R +TV+R+NMPPGPF+ + RVVA LDA SF VL D + VDKTD GTFMPS L G Sbjct: 84 RAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTG 143 Query: 418 GYRPLAFMDAADPRHAALKRVMISLAAARMHHVAPAFRTAFG 543 GYR L+++D ++P HA LK ++ L + R V P FR +G Sbjct: 144 GYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYG 185
>RRMJ_ARCFU (O28228) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 191 Score = 32.0 bits (71), Expect = 1.2 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 12/75 (16%) Frame = +1 Query: 172 LRDRLDYYYFQGAEEYFRSRIAR------------NGGATVLRVNMPPGPFITANSRVVA 315 ++DR DYYY++ +E +RSR A G VL + PG + S+V A Sbjct: 1 MKDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGW----SQVAA 56 Query: 316 FLDARSFSVLLDDAK 360 L AR +V ++ K Sbjct: 57 LLGARVVAVDINPMK 71
>MTA2_MOUSE (Q9R190) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) Length = 668 Score = 31.2 bits (69), Expect = 2.0 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -1 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>MTA2_HUMAN (O94776) Metastasis-associated protein MTA2 (Metastasis-associated| 1-like 1) (MTA1-L1 protein) (p53 target protein in deacetylase complex) Length = 668 Score = 31.2 bits (69), Expect = 2.0 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Frame = -1 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 AW P CR C SCW+ W + G Sbjct: 380 AWGPPNMQCRLCASCWIYWKKYGG 403
>DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +1 Query: 364 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMH 510 + +D+LD + P V GG P P+HAALK +L ++ H Sbjct: 607 NSSDSLDSSTRPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESH 655
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +1 Query: 175 RDRLDYYYFQGAEEYFRSR 231 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 30.8 bits (68), Expect = 2.6 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +1 Query: 16 AFGVRLALAHPAMTSRVPNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYY 195 A +A PA+ + V +S S P P+ ++V GG S L D Y Sbjct: 44 AMKASIAAGEPAVIAEVKKASPSKGVIRPDFHPADIAVSYEFGGA-----SCLSVLTDMY 98 Query: 196 YFQGAEEYFRSRIARNG-GATVLRVNMPPGPFITANSRVV 312 +FQG++ Y + AR VLR + P+ +RV+ Sbjct: 99 FFQGSDAYLQQ--AREACTLPVLRKDFTVDPYQVYEARVL 136
>SEF1_ASHGO (Q74Z37) Suppressor protein SEF1 homolog| Length = 1051 Score = 30.8 bits (68), Expect = 2.6 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Frame = +1 Query: 34 ALAHPAMTSRVPNSSGSSDSAEPKPSPSGLSV----REVPGGYGVPFFSPLRDRLDYYYF 201 AL + S VP ++ ++ SA P+P+ +V PGG P F PL Y Sbjct: 840 ALVGDNLNSSVPQAAVAA-SAPPEPAAVAATVPPEPAPAPGGQSYPLFQPL-------YV 891 Query: 202 QGAEEYFRSRIARNGGATVLRVNMPPGPFITANS 303 Q A R A A L P P IT+ S Sbjct: 892 QPAANVPMQRSASASVAEALPFRRPGMPKITSES 925
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +1 Query: 175 RDRLDYYYFQGAEEYFRSR 231 RDR DYYY Q EE +RSR Sbjct: 3 RDRRDYYYHQAKEEGYRSR 21
>BBP1_YEAST (Q12365) Protein BBP1| Length = 385 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +1 Query: 52 MTSRVPNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSR 231 + S++ N G + E + SP LSV+++PG + P RD +D YY + + ++R Sbjct: 163 LLSKLFNKDGVN---EVRRSPYKLSVKDIPGKFPSPLTK--RDEIDNYYVRDEDACHKNR 217
>S29A2_HUMAN (Q14542) Equilibrative nucleoside transporter 2 (Equilibrative| nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter) (Equilibrative NBMPR-insensitive nucleoside transporter) (Nucleoside transporter, ei-type) (Solute carrier f Length = 456 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +1 Query: 250 ATVLRVNMPPGPFITANSRVVAFLDARSFSVLLDDAKVDKTDTLDGTF 393 A +++V+M PGPF + V F++ SFS +L + + T+ T+ Sbjct: 114 AALVKVDMSPGPFFSITMASVCFIN--SFSAVLQGSLFGQLGTMPSTY 159
>PFA4_CRYNE (Q5KLN1) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 456 Score = 29.6 bits (65), Expect = 5.8 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 100 APHCRCCRSCWVPWTSWQG 44 A HCR C++CWV W G Sbjct: 108 AHHCRQCKTCWVNHCPWIG 126
>PPARA_CAVPO (O35507) Peroxisome proliferator-activated receptor alpha| (PPAR-alpha) Length = 467 Score = 29.6 bits (65), Expect = 5.8 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 14/70 (20%) Frame = +1 Query: 67 PNSSGS--SDSAEPKPSPSGLSVREVPGGYGVPFFSPLR-------DRLDYYYF-----Q 204 P S GS +D+ P SPS +S EVP G P S L D+ Y++ + Sbjct: 61 PGSDGSVITDTLSPASSPSSVSYPEVPCGVDEPPSSALNIECRICGDKASGYHYGVHACE 120 Query: 205 GAEEYFRSRI 234 G + +FR I Sbjct: 121 GCKGFFRRTI 130
>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 992 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 Query: 364 DKTDTLDGTFMPSLVLFGGYRPLAFMDAADPRHAALKRVMISLAAARMHHVA 519 + +D+LD + P V GG P P+HAALK +L ++ H A Sbjct: 607 NSSDSLDSSTRPPSVTRGGITPGPEAPEPPPKHAALKSEHGTLTSSESHSEA 658
>BCAR1_MOUSE (Q61140) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 874 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = +1 Query: 67 PNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSR 231 P SS + P PSP + ++ P G + DY + QG EE+ +++ Sbjct: 629 PTDKASSIQSRPLPSPPKFTSQDSPDGQYENSEGGWMEDYDYVHLQGKEEFEKTQ 683
>PPARA_CANFA (Q95N78) Peroxisome proliferator-activated receptor alpha| (PPAR-alpha) Length = 468 Score = 29.3 bits (64), Expect = 7.6 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 14/70 (20%) Frame = +1 Query: 67 PNSSGS--SDSAEPKPSPSGLSVREVPGGYGVPFFSPLR-------DRLDYYYF-----Q 204 P S GS +D+ P PSPS ++ PGG P L DR Y++ + Sbjct: 61 PGSDGSVITDTLSPAPSPSSVTHPAAPGGAEEPSSVALNIECRICGDRASGYHYGVHACE 120 Query: 205 GAEEYFRSRI 234 G + +FR I Sbjct: 121 GCKGFFRRTI 130
>BCAR1_RAT (Q63767) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 968 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = +1 Query: 67 PNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQGAEEYFRSR 231 P SS + P PSP + ++ P G + DY + QG EE+ +++ Sbjct: 723 PTDKASSIQSRPLPSPPKFTSQDSPDGQYENSEGGWMEDYDYVHLQGKEEFEKTQ 777
>TRUB_PYRFU (Q7LWY0) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 340 Score = 29.3 bits (64), Expect = 7.6 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +1 Query: 172 LRDRLDYYYF---QGAEEYFRSRI 234 L D +DYYYF G EEYFR I Sbjct: 217 LHDLVDYYYFWKEDGIEEYFRKAI 240
>PROP_CAVPO (Q64181) Properdin precursor (Factor P)| Length = 470 Score = 29.3 bits (64), Expect = 7.6 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%) Frame = -1 Query: 94 HCRCCRSC-WVPWTSW 50 HC+ CRS W PW+SW Sbjct: 70 HCQACRSPRWSPWSSW 85
>RARG2_HUMAN (P22932) Retinoic acid receptor gamma-2 (RAR-gamma-2)| Length = 443 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 Query: 88 DSAEPKPSPSGLSVREVPGGYG 153 DS++P P P+ S EVPGG G Sbjct: 414 DSSQPGPHPNASSEDEVPGGQG 435
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Frame = +1 Query: 28 RLALAHPAMTSRVPNSSGSSDSAEPKPSPSGLSVREVPGGYGVPFFSPLRDRLDYYYFQG 207 R + PA+T+ +++ + + P PSP+G + P G P + G Sbjct: 538 RSSAPSPAVTAAATSTAAAISTRAPTPSPAGRAPAADPRRAGAPALA------------G 585 Query: 208 AEEYFRSRIARNG--------GATVLRVNMPPGPFITANSR 306 A R+ + RNG + + R ++ PGP +A R Sbjct: 586 AA---RAEVGRNGNPGRERRPASAMARGDLDPGPESSAQKR 623
>MTA1_RAT (Q62599) Metastasis-associated protein MTA1| Length = 703 Score = 28.9 bits (63), Expect = 9.9 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -1 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>RARG1_HUMAN (P13631) Retinoic acid receptor gamma-1 (RAR-gamma-1)| Length = 454 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 Query: 88 DSAEPKPSPSGLSVREVPGGYG 153 DS++P P P+ S EVPGG G Sbjct: 425 DSSQPGPHPNASSEDEVPGGQG 446
>MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 9.9 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -1 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1| Length = 715 Score = 28.9 bits (63), Expect = 9.9 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%) Frame = -1 Query: 106 AWAP---HCRCCRSCWVPWTSWQG 44 +W P CR C SCW W + G Sbjct: 406 SWGPPNMQCRLCASCWTYWKKYGG 429
>SRF_XENLA (P23790) Serum response factor (SRF)| Length = 448 Score = 28.9 bits (63), Expect = 9.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 Query: 84 AAGAVGYPGRHGRVSKRKSNTKCKAQL 4 AAG VGYPG G VS K K + ++ Sbjct: 73 AAGVVGYPGASGTVSGAKPGKKTRGRV 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,060,359 Number of Sequences: 219361 Number of extensions: 721200 Number of successful extensions: 3073 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2930 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3061 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
