Clone Name | bart30g03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATG13_EMENI (Q5BBK4) Autophagy-related protein 13 | 30 | 5.6 |
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>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = +1 Query: 28 PPNADASSPHLTSPQPTHHQRASSDVSHRQ 117 P NA+ SSP+ SP+PT R SS SHR+ Sbjct: 496 PDNAN-SSPNSASPRPTPMSRYSSAFSHRR 524 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,020,725 Number of Sequences: 219361 Number of extensions: 434356 Number of successful extensions: 1050 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1017 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1049 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)