Clone Information

BLAST Search Result

Clone Name	bart30f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL13_ARATH (P41127) 60S ribosomal protein L13 (BBC1 protein homo...	85	1e-16
2	RL132_BRANA (P41129) 60S ribosomal protein L13-2 (Cold-induced p...	85	2e-16
3	RL131_BRANA (P41128) 60S ribosomal protein L13-1 (Cold-induced p...	85	2e-16
4	RL13_TOBAC (P49627) 60S ribosomal protein L13 (Clone 6.2.1)	69	7e-12
5	RL13_CHLSW (O48513) 60S ribosomal protein L13 (BBC1 protein homo...	66	7e-11
6	RL13_SPOFR (Q962U1) 60S ribosomal protein L13	62	1e-09
7	RL13_SCHPO (O74175) 60S ribosomal protein L13	58	2e-08
8	RL13_DROME (P41126) 60S ribosomal protein L13 (BBC1 protein homo...	57	3e-08
9	RL13_SCHMA (Q95043) 60S ribosomal protein L13 (BBC1 protein homo...	57	3e-08
10	RL13_ICTPU (Q90YV5) 60S ribosomal protein L13	54	4e-07
11	RL13_CAEEL (P91128) 60S ribosomal protein L13	53	5e-07
12	RL13_BRARE (Q90Z10) 60S ribosomal protein L13	53	5e-07
13	RL13_RAT (P41123) 60S ribosomal protein L13	50	5e-06
14	RL13_MOUSE (P47963) 60S ribosomal protein L13 (A52)	50	5e-06
15	RL13_CRIGR (Q9Z313) 60S ribosomal protein L13	50	5e-06
16	RL13_CHICK (P41125) 60S ribosomal protein L13 (Breast basic cons...	50	5e-06
17	RL13_BOVIN (Q56JZ1) 60S ribosomal protein L13	50	5e-06
18	RL13_HUMAN (P26373) 60S ribosomal protein L13 (Breast basic cons...	49	7e-06
19	RL13_SACEX (Q876B2) 60S ribosomal protein L13	39	0.010
20	RL13B_YEAST (P40212) 60S ribosomal protein L13-B	37	0.028
21	RL13A_YEAST (Q12690) 60S ribosomal protein L13-A	37	0.028
22	RL13_CANAL (O59931) 60S ribosomal protein L13	37	0.036
23	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	35	0.14
24	CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (C...	33	0.52
25	ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	32	0.89
26	ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	32	1.2
27	NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)	32	1.2
28	RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding sub...	32	1.5
29	PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B cat...	31	2.0
30	BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1...	31	2.6
31	RL13_LUMRU (O46157) 60S ribosomal protein L13	31	2.6
32	BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-Co...	31	2.6
33	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	30	3.4
34	PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose i...	30	3.4
35	CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al...	30	3.4
36	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	30	3.4
37	DS_DROME (Q24292) Protein dachsous precursor (Adherin)	30	3.4
38	TOM40_HUMAN (O96008) Probable mitochondrial import receptor subu...	30	3.4
39	TCF19_MACMU (Q5TM48) Transcription factor 19	30	3.4
40	ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt...	30	4.4
41	PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contain...	30	4.4
42	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	30	4.4
43	CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interacto...	30	4.4
44	CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding...	30	4.4
45	CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phyto...	30	4.4
46	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	30	4.4
47	CHLB_HUPLU (Q5SCX2) Light-independent protochlorophyllide reduct...	30	4.4
48	FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)	30	5.8
49	IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2	30	5.8
50	PAR3L_HUMAN (Q8TEW8) Amyotrophic lateral sclerosis 2 chromosome ...	30	5.8
51	TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA ...	30	5.8
52	PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior...	29	7.6
53	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	29	7.6
54	CHLB_LYCCO (P37848) Light-independent protochlorophyllide reduct...	29	7.6
55	HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)	29	7.6
56	PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catal...	29	7.6
57	PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B cat...	29	7.6
58	TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA ...	29	9.9
59	PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7...	29	9.9
60	LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis f...	29	9.9
61	VE2_HPV5B (P26545) Regulatory protein E2	29	9.9
62	VE2_HPV05 (P06921) Regulatory protein E2	29	9.9
63	POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)	29	9.9
64	FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (H...	29	9.9
65	NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleopor...	29	9.9
66	IE18_PRVIF (P11675) Immediate-early protein IE180	29	9.9
67	CHLB_LYCAN (P37847) Light-independent protochlorophyllide reduct...	29	9.9
68	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	29	9.9
69	ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disint...	29	9.9
70	5E5_RAT (Q63003) 5E5 antigen	29	9.9
71	EXPA_DROME (Q07436) Protein expanded	29	9.9
72	ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...	29	9.9
73	TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subuni...	29	9.9
74	BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)	29	9.9
75	TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription fact...	29	9.9
76	TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription fact...	29	9.9

>RL13_ARATH (P41127) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 206

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           +KHNNVIPNGHFKKHWQNYVKTWFNQPARK RRRIARQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQ 38

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>RL132_BRANA (P41129) 60S ribosomal protein L13-2 (Cold-induced protein C24B)|
          Length = 206

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           +KHNNVIPNGHFKKHWQNYVKTWFNQPARK RRR+ARQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQ 38

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>RL131_BRANA (P41128) 60S ribosomal protein L13-1 (Cold-induced protein C24A)|
          Length = 206

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           +KHNNVIPNGHFKKHWQNYVKTWFNQPARK RRR+ARQ
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQ 38

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>RL13_TOBAC (P49627) 60S ribosomal protein L13 (Clone 6.2.1)|
          Length = 202

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 456 NGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           NGHFKKHWQNYVKTWFNQPARK RRRIARQ
Sbjct: 5   NGHFKKHWQNYVKTWFNQPARKTRRRIARQ 34

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>RL13_CHLSW (O48513) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 208

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 429 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           MV+ N+++PNGHF K WQ +VKTWFNQPARKQRRR AR
Sbjct: 1   MVRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNAR 38

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>RL13_SPOFR (Q962U1) 60S ribosomal protein L13|
          Length = 219

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 429 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRR 533
           M K NN+IPNGHF K WQ +VKTWFNQPAR+ RR+
Sbjct: 1   MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRK 35

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>RL13_SCHPO (O74175) 60S ribosomal protein L13|
          Length = 208

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = +3

Query: 450 IPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           +PN HF K WQ YVKTWFNQP RK RRR ARQ
Sbjct: 9   LPNAHFHKDWQRYVKTWFNQPGRKLRRRQARQ 40

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>RL13_DROME (P41126) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 218

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 25/38 (65%), Positives = 28/38 (73%)
 Frame = +3

Query: 429 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           M K NN+IPN H+ K WQ +VKTWFNQPARK RR   R
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANR 38

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>RL13_SCHMA (Q95043) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 184

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +3

Query: 429 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           MV  N+V+ + HF+K WQ  VKTWFNQPARK+RRR AR+
Sbjct: 1   MVHGNDVLHHNHFRKKWQFMVKTWFNQPARKERRRQARK 39

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>RL13_ICTPU (Q90YV5) 60S ribosomal protein L13|
          Length = 210

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I N HF K WQ  V+TWFNQPARK RRR ARQ
Sbjct: 5   NGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQ 39

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>RL13_CAEEL (P91128) 60S ribosomal protein L13|
          Length = 207

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N ++ N HF+KHW   +KTWF+QPARK RRR  RQ
Sbjct: 6   NQMLGNAHFRKHWHKRIKTWFDQPARKLRRRQNRQ 40

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>RL13_BRARE (Q90Z10) 60S ribosomal protein L13|
          Length = 210

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/35 (68%), Positives = 26/35 (74%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I N HF K WQ  V+TWFNQPARK RRR ARQ
Sbjct: 5   NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQ 39

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>RL13_RAT (P41123) 60S ribosomal protein L13|
          Length = 210

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQ 39

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>RL13_MOUSE (P47963) 60S ribosomal protein L13 (A52)|
          Length = 210

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQ 39

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>RL13_CRIGR (Q9Z313) 60S ribosomal protein L13|
          Length = 210

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMILKPHFHKDWQRRVDTWFNQPARKIRRRKARQ 39

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>RL13_CHICK (P41125) 60S ribosomal protein L13 (Breast basic conserved protein|
           1)
          Length = 210

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQ 39

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>RL13_BOVIN (Q56JZ1) 60S ribosomal protein L13|
          Length = 210

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N +I   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQ 39

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>RL13_HUMAN (P26373) 60S ribosomal protein L13 (Breast basic conserved protein|
           1)
          Length = 210

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = +3

Query: 441 NNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIARQ 545
           N ++   HF K WQ  V TWFNQPARK RRR ARQ
Sbjct: 5   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQ 39

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>RL13_SACEX (Q876B2) 60S ribosomal protein L13|
          Length = 199

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           +  N  +   HF+KHWQ  VK  FNQ  +K  RR AR
Sbjct: 3   ISKNLPLLKNHFRKHWQERVKVHFNQAGKKASRRDAR 39

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>RL13B_YEAST (P40212) 60S ribosomal protein L13-B|
          Length = 199

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           +  N  I   HF+KHWQ  VK  F+Q  +K  RR AR
Sbjct: 3   ISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNAR 39

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>RL13A_YEAST (Q12690) 60S ribosomal protein L13-A|
          Length = 199

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           +  N  I   HF+KHWQ  VK  F+Q  +K  RR AR
Sbjct: 3   ISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNAR 39

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>RL13_CANAL (O59931) 60S ribosomal protein L13|
          Length = 202

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFNQPARKQRRRIAR 542
           +  N  + N HF+KHWQ  V+  F+Q  +K  RR +R
Sbjct: 3   ISKNLPLLNNHFRKHWQERVRVHFDQAGKKASRRQSR 39

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 183
           PP S P A PP   P     PP  P      LA ++ CGS+AS P
Sbjct: 434 PPTSGPAAPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQASPP 478

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>CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 751

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 31/128 (24%), Positives = 43/128 (33%), Gaps = 7/128 (5%)
 Frame = +1

Query: 166 LAPKMDGAEARD---PHPAIWASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSN 336
           L PK   A + +   P P   A A P   G    + +   A P G + G   GGSS  SN
Sbjct: 353 LGPKASPAPSHNSGTPAPYAQAVAPPNASGPSNAQPRPPSAQPSGGS-GGGSGGSSSNSN 411

Query: 337 ENFEG----RRGETXXXXXXXXXXXXSAXXXXXXXXXXXXMLSPTATSRSIGRTMSRPGS 504
               G    + G T                           L PT+   +   + S+  S
Sbjct: 412 SGTGGGAGKQNGATSYSSVVADSPAEVTLSSSGGSSASSQALGPTSGPHNPAPSTSKESS 471

Query: 505 TSLPASRG 528
           T+ P+  G
Sbjct: 472 TAAPSGAG 479

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>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 350 PSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTH 237
           PS++      LPPR+A    PP   P    RP RPP+H
Sbjct: 563 PSRYQSGPNSLPPRAATPTRPPSRPP---SRPSRPPSH 597

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>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 350 PSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTH 237
           PS++      LPPR+A    PP   P    RP RPP+H
Sbjct: 533 PSRYQSGPNSLPPRAATHTRPPSRPP---SRPSRPPSH 567

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>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)|
          Length = 1426

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 317 PPRSAPTA--APPGLAPRVLQRPPRPPTHRGMALAQMA 210
           P R  PT+  +PP   PRVL  P   P   G++++Q+A
Sbjct: 471 PSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLA 508

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>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 609

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 183
           P   AP +APP   P+ +  PP P  +RG   +++ G GS  + P
Sbjct: 127 PAAPAPASAPPPSKPQNISAPPPPSMNRG--ASKLFGGGSVVNTP 169

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>PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 524

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPPTHR 234
           PP   P   PPG A RV++  P PPTHR
Sbjct: 11  PPPPPPPPPPPG-ADRVVKAVPFPPTHR 37

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>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +1

Query: 223 SAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSS 324
           S MP+  GG GG     GA   GA  G   GGSS
Sbjct: 5   SRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSS 38

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>RL13_LUMRU (O46157) 60S ribosomal protein L13|
          Length = 188

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 501 FNQPARKQRRRIARQ 545
           FNQPARK+RRR+AR+
Sbjct: 2   FNQPARKERRRVARR 16

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>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 280

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -3

Query: 353 RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMAL----AQMAGCGSRASA 186
           +P++ S+   + PP +AP AA P  +      PP PPT    +L    + MAG   R+ A
Sbjct: 161 QPNQPSYAQQMAPP-AAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPA 219

Query: 185 P 183
           P
Sbjct: 220 P 220

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = +1

Query: 79  GCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWASAMPR*VGGRGG 258
           G W   TAGR      SA    +T LP    P+      R P   + +++    +G    
Sbjct: 436 GLWGHGTAGRERCSQDSASPASSTGLPEGSEPE-SSCCPRTPEDGVDSASPSAQIGAERK 494

Query: 259 RCKTRGASPGGAAVGADLGG 318
              + G  PG    GA LGG
Sbjct: 495 AGGSLGEDPGLCIDGAGLGG 514

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>PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose isomerase|
           (Glucose-6-phosphate isomerase) (EC 5.3.1.9) (GPI)
           (Phosphoglucose isomerase) (PGI) (Mannose-6-phosphate
           isomerase) (EC 5.3.1.8) (Phosphomannose isomerase) (PMI)
          Length = 335

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
 Frame = -3

Query: 293 APPGLAPRVLQ--RPPRPPTHR--GMALAQMAG-------CGSRAS 189
           AP G   RV++  RPPRPP HR  G+ LA  +G       CGS  S
Sbjct: 57  APQGPEFRVVKDFRPPRPPRHRGYGLVLASYSGNTLETVECGSLLS 102

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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
           (Low-voltage-activated calcium channel alpha1 3.2
           subunit)
          Length = 2353

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = -1

Query: 322 YYHQDLHRRPLRPGSRPGFCSGRRALLLIGAWRSPRWPGVG 200
           +YH   H  P RPG  PG C  R  L+  GA  SP  PG G
Sbjct: 528 HYHFS-HGSPRRPGPEPGACDTR--LVRAGAPPSPPSPGRG 565

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2157

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPP 243
           PP +  T APP   P+ L  PP PP
Sbjct: 511 PPAAPSTPAPPPAVPKELPAPPAPP 535

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>DS_DROME (Q24292) Protein dachsous precursor (Adherin)|
          Length = 3503

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -3

Query: 317  PPRSAPTAAPPGL----APRVLQRPPRPPTHRGMALAQM 213
            PP + PT  PP L    APR +  P R P H  +A A +
Sbjct: 3393 PPSAPPTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHL 3431

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>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (Haymaker protein) (p38.5)
          Length = 361

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 323 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 207
           +L   S P   PP  AP ++  PP PP+  G  L  + G
Sbjct: 4   VLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGG 42

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>TCF19_MACMU (Q5TM48) Transcription factor 19|
          Length = 345

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 365 VSPLRPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPP----RPPTHRGMA 225
           +S LRP   +F      PRS P  APPG        PP    R   HR +A
Sbjct: 182 LSKLRPQPLTFSPSWGGPRSLPVPAPPGEVGNAPSAPPPRNRRKSVHRVLA 232

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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 362 SPLRPSKFSFEYLLLPPRSAPTAAPPG-LAPRVLQRPPRPPTHRGMALAQMAGCGSRASA 186
           +P+ P   S     +PP SAP  +PPG +AP+        PT        +A  GS +S+
Sbjct: 239 APMAPKSSS----TIPPSSAPMTSPPGSMAPKSSSPVSNSPT----VSPSLAPGGSTSSS 290

Query: 185 PS 180
           PS
Sbjct: 291 PS 292

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>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin|
           heavy chain A; Activation peptide; Plasmin heavy chain
           A, short form; Plasmin light chain B]
          Length = 812

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +1

Query: 28  PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 192
           P AGL     R P   K  W   T  R  W+  + K+C  T      AP+  G E
Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Hyperpolarization-activated
            cation channel 4) (HAC-4)
          Length = 1175

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 326  LLLPPRSAPTAAPPGLAPRVLQRPPRPP 243
            LLLPP S+P   PP  AP+    PP  P
Sbjct: 1033 LLLPPASSPPPPPPPPAPQRRATPPLAP 1060



 Score = 28.9 bits (63), Expect = 9.9
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 14/64 (21%)
 Frame = -3

Query: 332  EYLLLPPRSAPTAAP-----------PGLA---PRVLQRPPRPPTHRGMALAQMAGCGSR 195
            E+ L PP  +PT++P           PGL    P   + PPR P     A    AG    
Sbjct: 939  EHFLPPPARSPTSSPGQLGQPPGELSPGLGSGPPGTPETPPRQPERLPFAAGASAGASPV 998

Query: 194  ASAP 183
            A +P
Sbjct: 999  AFSP 1002

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>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)|
           (Ik3-1)
          Length = 568

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 308 SAPTAAPPGLAPRVLQRPPRPP 243
           S+P   PP L PRVL  P +PP
Sbjct: 123 SSPCPLPPSLVPRVLGEPSQPP 144

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>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
           (GTP-binding and GTPase activating protein 2) (GGAP2)
          Length = 1192

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
 Frame = -3

Query: 326 LLLPPRSAPTAA-------PPGLAPRVLQRPPRPPTHRG 231
           L LPP  +P  A       PPG AP +   PP P   RG
Sbjct: 293 LTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRG 331

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>CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene|
           desaturase)
          Length = 583

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = -3

Query: 350 PSKFSFEYLLLPPRSAPTAAPPG 282
           PS+ SF Y+ LP R  PTAAPPG
Sbjct: 351 PSELSF-YVNLPSRIDPTAAPPG 372

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAP-RVLQRPPRPPTHR-----GMALAQMAGCGSRASAPSIFG 171
           PP  APTAAPP   P R     P PP +R       AL   A  G     PS+ G
Sbjct: 313 PPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG 367

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>CHLB_HUPLU (Q5SCX2) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
          Length = 511

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFN 506
           +K N VIP G F +  +N  K WFN
Sbjct: 194 IKINQVIPEGSFVEDLENLPKAWFN 218

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>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)|
          Length = 685

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAP---RVLQRPP--RPPTHRGMALAQMAGCGSRASAP 183
           PPR  P   PPG  P       RPP  RPP HRG       G G  A+AP
Sbjct: 163 PPRRLPPPPPPGEQPPSGSGHSRPPGARPP-HRG---GSSRGSGDAAAAP 208

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>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
 Frame = +1

Query: 157 PNQLAPKMDGAEARD-PHPAIWASAMPR*VGGR-----GGRCKTRGASPGGAAVGADLGG 318
           P+ ++P+  GA     P P    + +PR  GGR     GGR    G +  G  VGA  GG
Sbjct: 204 PSSMSPRPGGAVGGGGPRPP--RTGVPRPGGGRPGAPVGGRSDAGGGNYRGGGVGALPGG 261

Query: 319 SSKYSNENFEGRRG 360
            S      F GR G
Sbjct: 262 GS----GGFRGRPG 271



 Score = 28.9 bits (63), Expect = 9.9
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +1

Query: 202 PHPAIWASAM-PR*---VGGRGGRCKTRGAS-PGGAAVGADLGGSSKYSNENFEG 351
           P P+   S+M PR    VGG G R    G   PGG   GA +GG S     N+ G
Sbjct: 198 PRPSASPSSMSPRPGGAVGGGGPRPPRTGVPRPGGGRPGAPVGGRSDAGGGNYRG 252

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>PAR3L_HUMAN (Q8TEW8) Amyotrophic lateral sclerosis 2 chromosome region candidate|
            gene 19 protein (Partitioning-defective 3-like protein)
            (PAR3-L protein) (PAR3-beta)
          Length = 1205

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
 Frame = -3

Query: 353  RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG-CGSRASAP 183
            RP++     L  P    P  AP    P     PP PP H+ M   Q  G  G R  +P
Sbjct: 1128 RPTELRVADLRYPQHYPPPPAPQHKGPFRQDVPPSPPQHQRMPAYQETGRPGPRGGSP 1185

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>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150) (p144) (Formin-binding protein 28) (FBP 28)
          Length = 1100

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 320 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRG 231
           +PP   P   PP + P  LQRPP  P   G
Sbjct: 76  MPPMPPPGGIPPPMGPPHLQRPPFMPPPMG 105

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>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)|
          Length = 1601

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -3

Query: 314 PRSAPTAAPPGLAPRVLQ-----RPPRPPTHRGMALAQMAGCGSR 195
           P   P A PP LAPR LQ      PP  P H   A  QM+  G+R
Sbjct: 811 PLMPPPAKPPMLAPRKLQPSAQFAPPPSPIHH-HAGVQMSAPGNR 854

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
 Frame = -3

Query: 314 PRSAPTAAPPGLAPRVLQR---------PPRPPTHRGMALAQMAG 207
           P + PT  PP   P  LQ+         PP PP     ALA +AG
Sbjct: 212 PPAGPTGLPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAG 256

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>CHLB_LYCCO (P37848) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
           (Fragment)
          Length = 103

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFN 506
           ++ N VIP G F +  QN  K WFN
Sbjct: 9   IEINQVIPEGGFVEDLQNLPKAWFN 33

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>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)|
          Length = 339

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIF 174
           P  S+ + A PG     L  P    TH G A A  A   + A+A S F
Sbjct: 23  PASSSSSVAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASTF 70

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>PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 525

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 234
           P R+AP   PP   P    RV++  P PPTHR
Sbjct: 6   PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37

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>PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 525

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 234
           P R+AP   PP   P    RV++  P PPTHR
Sbjct: 6   PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37

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>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 320 LPPRSAPTAAPPGLAPRVLQRPPRPP 243
           +PP   P   PP + P  LQRPP  P
Sbjct: 76  MPPMPPPGGIPPPMGPPHLQRPPFMP 101

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>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)|
          Length = 543

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 353 RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCG 201
           +P +++      P R AP  AP    PR   R PRPP  R     ++ G G
Sbjct: 437 QPQRYATPQPQQPQRYAPPPAPEPQQPR---REPRPPRQRSANPMRIPGLG 484

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>LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor homolog (LPS-induced TNF-alpha factor homolog)
          Length = 148

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 338 SFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMA 210
           S  Y  +P      +APP         PP PP H+GM    M+
Sbjct: 4   SGNYQPVPIGFTVPSAPPSYEEATFHHPPYPPLHQGMDAKNMS 46

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>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 220 ASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSNENFEGRRG 360
           +S+ P     RGG  K RG SPG      ++GGS +  +    GR G
Sbjct: 382 SSSSPAHKRSRGGSAKLRGVSPG------EVGGSLRSVSSKHTGRLG 422

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>VE2_HPV05 (P06921) Regulatory protein E2|
          Length = 514

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 220 ASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSNENFEGRRG 360
           +S+ P     RGG  K RG SPG      ++GGS +  +    GR G
Sbjct: 382 SSSSPAHKRSRGGSAKLRGVSPG------EVGGSLRSVSSKHTGRLG 422

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>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = -3

Query: 347 SKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPT 240
           S F     L PP S   AA P   P   Q+PPRPPT
Sbjct: 558 SSFLPSSCLQPPASPSIAAAPHPLPPA-QKPPRPPT 592

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>FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (HFH-BF-2)|
           (CBF-2) (T-14-6)
          Length = 440

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 341 FSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPP 243
           F+F +   PPR  P AAP G     L  PP PP
Sbjct: 296 FAFHHPSPPPRQ-PPAAPAGAPAAALPPPPPPP 327

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>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 111 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 230
           V+ + +R G+ N SPAE+  P      S  P P HL  R+
Sbjct: 22  VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
 Frame = -3

Query: 317 PPRSAPTAAP-PGLAPRVLQRPPRP------PTHRGMALAQMAGCGSRASAPSIFGAS*F 159
           P R  P   P P   PR    P +P      P  RG A       G   SAP   GA   
Sbjct: 200 PARGDPVGEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGP-VSAPGGGGAPSG 258

Query: 158 GR*VVTHSLADFDFHDHRPAVLIDQHPLWVLG*RAVGHRNPASGSSRIASSA 3
           G     H       H HR  +L +      L  R +G R+P S +   +SS+
Sbjct: 259 GGDRGRHH------HQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSSSSS 304

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>CHLB_LYCAN (P37847) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
           (Fragment)
          Length = 103

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 VKHNNVIPNGHFKKHWQNYVKTWFN 506
           ++ N VIP G F +  QN  K WFN
Sbjct: 9   IEINQVIPEGGFIEDLQNLPKAWFN 33

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 317 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGM 228
           PP   P+A P    P    RPP PP+  GM
Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380

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>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 46   CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 150
            C     PRTHK C S +     SWK+   KEC  T
Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483

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>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 23/67 (34%), Positives = 26/67 (38%)
 Frame = +1

Query: 160 NQLAPKMDGAEARDPHPAIWASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSNE 339
           +Q  P + GA     H           +GGRG R   RG   GG A GA  GG       
Sbjct: 535 SQTLPALAGAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGA-GAS-GGGRGGRGR 592

Query: 340 NFEGRRG 360
              GRRG
Sbjct: 593 GRGGRRG 599

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>EXPA_DROME (Q07436) Protein expanded|
          Length = 1427

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 329  YLLLP-PRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFGAS 165
            Y+ LP P  +P  +P   +      PP PP     ALA  A  G+ +S+ S+F  S
Sbjct: 1124 YVQLPGPGYSPLYSPSMASLCSSYEPPPPPPLHPAALAAAAAAGAGSSSSSMFARS 1179

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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
 Frame = -3

Query: 359 PLRPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRP---------PRPPTHRGMALAQMAG 207
           PL P+  S    L PP +APT  PP  A ++ Q P         P PP        ++  
Sbjct: 689 PLPPAGPSSLSSLPPPPAAPTTGPPLTATQIKQEPAEEYETPESPVPPARSPSPPPKVVD 748

Query: 206 CGSRASAPSIF 174
             S AS  + F
Sbjct: 749 VPSHASQSARF 759

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>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (38 kDa mitochondrial outer membrane protein)
           (OM38)
          Length = 361

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 323 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 207
           +L   S P   PP   P ++  PP PP+  G  L  + G
Sbjct: 4   VLAASSPPAGPPPPPTPSLVGLPPPPPSPPGFTLPPLGG 42

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>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +1

Query: 220 ASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSNEN 342
           A+A     GG GG     G   GGA  GA+L  SS Y  EN
Sbjct: 241 AAASAAAAGGGGGG----GLGVGGAPAGAELDDSSDYHEEN 277

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>TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 365 VSPLRPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPP----RPPTHRGMA 225
           +S LRP   +F      P+S P  APPG        PP    R   HR +A
Sbjct: 182 LSKLRPQPLTFSPSWGGPKSLPVPAPPGEVGTTPSAPPQRNRRKSVHRVLA 232

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>TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 365 VSPLRPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPP----RPPTHRGMA 225
           +S LRP   +F      P+S P  APPG        PP    R   HR +A
Sbjct: 182 LSKLRPQPLTFSPSWGGPKSLPVPAPPGEVGTTPSAPPQRNRRKSVHRVLA 232


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,225,975
Number of Sequences: 219361
Number of extensions: 1717888
Number of successful extensions: 8321
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 6823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8194
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result