ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart30f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) ... 33 0.59
2MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro... 30 2.9
3GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog) 30 5.0
46PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxyl... 30 5.0
5LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-bind... 29 6.5
6GLUQ_PSESM (Q888P9) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-)... 29 8.5

>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)|
          Length = 738

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +1

Query: 151 KLSPLSPVRPDDKRRAPAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGL 330
           KL  L+   P++K+      +LL+   S    +  +   + +L  LWK   CP    E +
Sbjct: 497 KLKELNGTAPEEKKLTEDDLILLEKILSLICNSSSEKPTVQQLQILWKAINCP----EDI 552

Query: 331 VKPALQALEITFRFVSV 381
           V PAL  L ++ +  SV
Sbjct: 553 VFPALDILRLSIKHPSV 569



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>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
 Frame = -3

Query: 386 SATDTKRKVISSACSAGLTRPSSVQPGQHAPFHSLDSS-GSRRYCSYASAAELSCTFSNT 210
           SA  T R  +S   S+     SS+     A   SL SS  SR   S+ S++    + S T
Sbjct: 37  SAVSTARSSVSRVSSSSSILSSSMVSSSSADSSSLTSSTSSRSLVSHTSSSTSIASISFT 96

Query: 209 DAAGARRLSSGRTGESGDNLVVAISFSTVPAQQTLGLTNLSFETSTAPCS 60
             + +   S+  +  +  +   + SFS      T   +  S +TST+  S
Sbjct: 97  SFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSS 146



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>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)|
          Length = 2260

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 161  GDNLVVAISFSTVPAQQTLGLTNLSFETSTAPCS 60
            G N++  +S +  P+ QT+ +T L    +T PCS
Sbjct: 1170 GCNMIQPVSAAVAPSPQTIPITTLLVNPTTFPCS 1203



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>6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 471

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 232 SSAAEAYEQYLRLPELSRLWKGAC 303
           + A++ Y   L L EL+R+WKG C
Sbjct: 345 AKASQVYNYGLNLGELARIWKGGC 368



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>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1821

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 145 TTKLSPLSPVRPDDKRRA-PAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWT 318
           T + +PL   +P  + RA PA   L   Q S AA       RL   + +  G CCPGWT
Sbjct: 121 TRRSTPLGQQQPAPRTRAAPALPRLGTPQRSGAAPPTPPRGRLTGRN-VCGGQCCPGWT 178



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>GLUQ_PSESM (Q888P9) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 295

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -2

Query: 456 LARGERLEPPRELAAAGVA-PRVGERDGHEAEGDLKR 349
           L R E L+PPRE+A A VA     ER G E +G++ R
Sbjct: 41  LLRMEDLDPPREVAGAQVAILETLERYGFEWDGEMVR 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,932,712
Number of Sequences: 219361
Number of extensions: 745822
Number of successful extensions: 2879
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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