ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30e09 |
|---|---|
| Clone Library Name | barley_pub |
>CD9_RAT (P40241) CD9 antigen| Length = 225 Score = 32.7 bits (73), Expect = 0.73 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANT-------TDCIRFLQWPIIIIGLAVMVVSLMGFAGA 335 NFI +LA I VL G+WL + T T+ F I+IG +++ L+GF G Sbjct: 17 NFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNHSSFYTGVYILIGAGALMM-LVGFLGC 75 Query: 336 C 338 C Sbjct: 76 C 76
>CD9_FELCA (P40239) CD9 antigen| Length = 225 Score = 32.3 bits (72), Expect = 0.96 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR-------FLQWPIIIIGLAVMVVSLMGFAGA 335 NFI +LA I VL G+WL + T F I+IG +++ L+GF G Sbjct: 17 NFIFWLAGIAVLAVGLWLRFDSQTKSIFEQDSQPSSFYTGVYILIGAGALMM-LVGFLGC 75 Query: 336 C 338 C Sbjct: 76 C 76
>CD9_BOVIN (P30932) CD9 antigen| Length = 225 Score = 32.3 bits (72), Expect = 0.96 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR-------FLQWPIIIIGLAVMVVSLMGFAGA 335 NFI +LA I VL G+WL + T F I+IG +++ L+GF G Sbjct: 17 NFIFWLAGIAVLSVGLWLRFDSQTKSIFEQENNDSSFYTGVYILIGAGALMM-LVGFLGC 75 Query: 336 C 338 C Sbjct: 76 C 76
>CD9_MOUSE (P40240) CD9 antigen| Length = 225 Score = 32.0 bits (71), Expect = 1.3 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR-------FLQWPIIIIGLAVMVVSLMGFAGA 335 NFI +LA I VL G+WL + T F I+IG +++ L+GF G Sbjct: 17 NFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGVYILIGAGALMM-LVGFLGC 75 Query: 336 C 338 C Sbjct: 76 C 76
>CD9_HUMAN (P21926) CD9 antigen (p24) (Leukocyte antigen MIC3)| (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29) Length = 227 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR---------FLQWPIIIIGLAVMVVSLMGFA 329 NFI +LA I VL G+WL + T F I+IG +++ L+GF Sbjct: 17 NFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMM-LVGFL 75 Query: 330 GAC 338 G C Sbjct: 76 GCC 78
>CD9_CERAE (P30409) CD9 antigen (27 kDa diphtheria toxin receptor-associated| protein) (DRAP27) Length = 227 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR---------FLQWPIIIIGLAVMVVSLMGFA 329 NFI +LA I VL G+WL + T F I+IG +++ L+GF Sbjct: 17 NFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMM-LVGFL 75 Query: 330 GAC 338 G C Sbjct: 76 GCC 78
>CD9_PIG (Q8WMQ3) CD9 antigen| Length = 225 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Frame = +3 Query: 177 NFITFLASIPVLGGGIWLASRANTTDCIR-------FLQWPIIIIGLA--VMVVSLMGFA 329 NFI +LA I VL G+WL + T F I+IG +MVV +G Sbjct: 17 NFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNNSSFYTGVYILIGAGALMMVVGFLGCC 76 Query: 330 GACYRQTWLLRIY 368 GA +L ++ Sbjct: 77 GAVQESQCMLGLF 89
>CD81_SAGOE (Q9N0J9) CD81 protein| Length = 236 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT+ + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTNLL-YLELGDKPAPNTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>CD81_PANTR (P60034) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT+ + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTNLL-YLELGDKPAPNTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>CD81_HUMAN (P60033) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) (Tetraspanin-28) (Tspan-28) Length = 236 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT+ + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTNLL-YLELGDKPAPNTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>CD81_CERAE (O97703) CD81 antigen| Length = 236 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT+ + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTNLL-YLELGDKPAPNTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>CD82_HUMAN (P27701) CD82 antigen (Inducible membrane protein R2) (C33 antigen)| (IA4) (Metastasis suppressor Kangai 1) (Suppressor of tumorigenicity-6) (Tetraspanin-27) (Tspan-27) Length = 267 Score = 29.6 bits (65), Expect = 6.2 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Frame = +3 Query: 165 LGVVNFITFLASIPVLGGGIW-LASRAN-------TTDCIRFLQWPIIIIGLAVMVVSLM 320 L + N I F+ +LG G+W LA +++ ++ +R + I +G M++ + Sbjct: 13 LFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFIGVGAVTMLMGFL 72 Query: 321 GFAGACYRQTWLLRIY 368 G GA LL +Y Sbjct: 73 GCIGAVNEVRCLLGLY 88
>CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 29.6 bits (65), Expect = 6.2 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTSLL-YLELGNKPAPNTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>CD81_RAT (Q62745) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target| of the antiproliferative antibody 1) Length = 236 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 14/80 (17%) Frame = +3 Query: 162 MLGVVNFITFLASIPVLGGGIWLASRANTTDCIRFLQ--------------WPIIIIGLA 299 +L V NF+ +LA +LG +WL TT + +L+ + +I +G Sbjct: 13 LLFVFNFVFWLAGGVILGVALWLRHDPQTTTLL-YLELGDKPAPSTFYVGIYILIAVGAV 71 Query: 300 VMVVSLMGFAGACYRQTWLL 359 +M V +G GA LL Sbjct: 72 MMFVGFLGCYGAIQESQCLL 91
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 29.3 bits (64), Expect = 8.1 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Frame = +3 Query: 228 LASRANTTDCIRFLQWP----IIIIGLAVMVVSLMGFAGACY 341 ++S N+T + + W II+ + ++VV LMGF GA Y Sbjct: 493 VSSSENSTSALADVSWTQFNIIILTVIIIVVVLLMGFVGAVY 534 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,537,643 Number of Sequences: 219361 Number of extensions: 545847 Number of successful extensions: 2059 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1958 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2055 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
