Clone Information

BLAST Search Result

Clone Name	bart30e06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)	37	0.056
2	FAS2_RHOFA (P46374) Ferredoxin fas2	35	0.13
3	FER_THEMA (P46797) Ferredoxin	34	0.28
4	MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (P...	33	0.81
5	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	32	1.1
6	BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7	32	1.1
7	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	32	1.1
8	FER_THELI (P29604) Ferredoxin	32	1.4
9	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	32	1.4
10	PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase...	32	1.4
11	Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916	32	1.8
12	TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibr...	32	1.8
13	TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibr...	32	1.8
14	SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem...	32	1.8
15	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	32	1.8
16	SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)	32	1.8
17	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	31	2.4
18	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	31	2.4
19	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	31	2.4
20	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	31	2.4
21	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	31	2.4
22	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	31	2.4
23	BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec...	25	2.9
24	VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor	31	3.1
25	PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)	31	3.1
26	VG03_ICHV1 (Q00115) Hypothetical gene 3 protein	31	3.1
27	VGLX_EHV1B (P28968) Glycoprotein X precursor	31	3.1
28	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	31	3.1
29	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	31	3.1
30	FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)	31	3.1
31	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	30	4.0
32	K1683_HUMAN (Q9H0B3) Protein KIAA1683	30	4.0
33	VRP1_YEAST (P37370) Verprolin	30	4.0
34	PEPA_ASPAW (P17946) Aspergillopepsin A precursor (EC 3.4.23.18)	30	5.3
35	ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat prot...	30	5.3
36	WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 pr...	30	5.3
37	DEND_HUMAN (O94850) Dendrin	30	5.3
38	M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kin...	30	5.3
39	CSKI2_MOUSE (Q8VHK1) Caskin-2	30	5.3
40	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	5.3
41	PEPA_ASPSA (Q12567) Aspergillopepsin A precursor (EC 3.4.23.18) ...	30	6.9
42	PEPA_ASPNG (P55325) Aspergillopepsin A precursor (EC 3.4.23.18)	30	6.9
43	ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc fi...	30	6.9
44	ASCL2_RAT (P19360) Achaete-scute homolog 2	30	6.9
45	CUT2_CAEEL (P34682) Cuticlin-2 precursor	30	6.9
46	VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)	29	9.0
47	ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (A...	29	9.0
48	ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 ...	29	9.0
49	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	29	9.0
50	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	29	9.0
51	MMPS3_MYCTU (P65378) Putative membrane protein mmpS3	29	9.0
52	MMPS3_MYCBO (P65379) Putative membrane protein mmpS3	29	9.0
53	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	29	9.0
54	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	9.0
55	MYCN_HUMAN (P04198) N-myc proto-oncogene protein	29	9.0
56	SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)	29	9.0

>FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)|
          Length = 59

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 242 VDHR-CIDCATCRWMAPEVFKRVDG-QSAVAAQPTSEETRTKALQALLSCPTSSI 400
           +DH  CI C +C  + PEVF  +DG + A+   P S  T   A  A+ +CP  +I
Sbjct: 4   IDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDS--TAECAQDAIDACPVEAI 56

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>FAS2_RHOFA (P46374) Ferredoxin fas2|
          Length = 304

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +2

Query: 245 DHRCIDCATCRWMAPEVFKRV-DGQSAVAAQPTSEETRTKALQALLSCPTSSIRTDKPAQ 421
           + RC     C  +APEVF++  DG   +     S +  +    A  SCP ++IR ++ A 
Sbjct: 7   ERRCFGSGQCVLVAPEVFEQSNDGTVTLLVDKPSPDNHSLVRAAARSCPATAIRFEENAM 66

Query: 422 DMLQVQNTFPLPIDDDLPGV 481
                + ++     DDLP +
Sbjct: 67  RQEPTEFSY-----DDLPAL 81

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>FER_THEMA (P46797) Ferredoxin|
          Length = 60

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 254 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSIRTDK 412
           CI C  C  + P+VF+  D   A   QP ++    K   A  SCPT +I  ++
Sbjct: 10  CIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAK--DAADSCPTGAISVEE 60

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>MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (Protein string)|
           (Cdc25-like protein)
          Length = 479

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 26/91 (28%), Positives = 36/91 (39%)
 Frame = +3

Query: 24  GSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST 203
           G S RR ++       +S   ST  PP  +P     C +   PP S   +P+    R   
Sbjct: 168 GLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARDCFKRPEPPASANCSPI-QSKRHRC 226

Query: 204 AGGARRTCPATSSSITGASTVPPAGGWLRRC 296
           A   +  CPA S       + PP    LR+C
Sbjct: 227 AAVEKENCPAPSPLSQVTISHPPP---LRKC 254

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>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
 Frame = +3

Query: 24  GSSHRRSALETENFTRQSPWRSTFAPPHPS-PPRRLTCVRADAPPLSLWSTPL------- 179
           G   RR+    E  +  S W+ T  PP P  PPRR   + A  PP  +   P        
Sbjct: 141 GPGRRRADNGEEGASLGSGWKLTEEPPLPPPPPRRKGPLPAGPPPEDVPGPPKRKEREAG 200

Query: 180 --CPLPRRSTAGGARR--------TCPATSSSITGASTVPP 272
              P PR+   GG  R         C    S   G   +PP
Sbjct: 201 NEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPP 241

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>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +3

Query: 72  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 251
           Q P RS   P + S     T  +A  PP+ L S    P    STAG  R+T  A +++ T
Sbjct: 787 QHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAAAAATTT 846

Query: 252 GASTVPPA 275
             +T   A
Sbjct: 847 STATAAAA 854

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>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = +3

Query: 75  SPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 254
           S W +  +PP   PPR  +     APPLS     L  LPR ++  G+ R  P   ++   
Sbjct: 655 SHWSALLSPP--VPPRPPSSGPPPAPPLS---PALSGLPRPASPYGSLRRHPPPWAAPAH 709

Query: 255 ASTVPPAGGW 284
               P A GW
Sbjct: 710 VPPAPQASGW 719

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>FER_THELI (P29604) Ferredoxin|
          Length = 59

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 254 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSIRTD 409
           CI C  C  + P+VF+  D   A A    +E     A +A  SCPT +I  +
Sbjct: 10  CIGCGVCASICPDVFEMDDDGKAKAL--VAETDLECAKEAAESCPTGAITVE 59

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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -3

Query: 289 RSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGG 149
           R   P+  +V  P + EE  G     PP    RGRG    +  D GG
Sbjct: 687 RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGG 733

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>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +2

Query: 251 RCIDCATCRWMAPEVFKRVDGQSAV--AAQPTSEETRTKALQALLS-CPTSSIRTDKPA 418
           +C+    C   APEVF + D    V   A PTS  TR  A +A  +  P SS R  +PA
Sbjct: 9   QCVGAGQCVLNAPEVFDQDDDGVVVLLRADPTSGTTRRSARRATCARRPRSSSRRTEPA 67

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>Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916|
          Length = 629

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +3

Query: 99  PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST-AGGARRTCPATSSSITGASTV--P 269
           PP P+ PR  +  R  APP  ++ T    +P   T A G R      S S+  A+ V  P
Sbjct: 349 PPRPASPRLRSSPRPSAPPSKIFRTRALRVPGVGTGAPGRRSRARNASGSVVAAAEVSDP 408

Query: 270 PAGG 281
            A G
Sbjct: 409 DAHG 412

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>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 268 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 92
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 106 GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 162

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>TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 382

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 268 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 92
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 48  GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 104

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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 6/94 (6%)
 Frame = +3

Query: 18   RLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------L 179
            R GS    SA  T       P  S F    P P   +  +R D PP    + P       
Sbjct: 783  RKGSEPLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPALS 842

Query: 180  CPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 281
             P PR    GG+RR    T  +  G  T  P+GG
Sbjct: 843  APAPRLG-VGGSRRLPFPTHRAPPGLLTRVPSGG 875

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>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +3

Query: 33  HRRSALETENFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 203
           H+   L  E+ T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589

Query: 204 AGGARRTCP 230
              A    P
Sbjct: 590 VVSAVPVMP 598

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>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +3

Query: 33  HRRSALETENFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 203
           H+   L  E+ T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 528 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTT 587

Query: 204 AGGARRTCP 230
              A    P
Sbjct: 588 VVSAVPVMP 596

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 5/104 (4%)
 Frame = +3

Query: 174 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG-----WLRRCSRESTASXXXXXXX 338
           P  PLP R+   G RR   A      GA+ VP AGG      LRR   +   S       
Sbjct: 79  PPGPLPGRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAAS 138

Query: 339 XXXXXXXXXXXXCSLALHPLSAPTSLHRTCSKCRTRSLSPSTMI 470
                          A      P S   + S C TRSL   T++
Sbjct: 139 SSSSSSAAAASHSPGA---AGLPASCSASASLC-TRSLDRKTLL 178

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>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1798

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 10/45 (22%)
 Frame = -3

Query: 280  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHS 176
            PP+G  V  PV          +DEE  G    + PA+E RGRG S
Sbjct: 963  PPSGEGVSGPVTEHSGEQRPKLDEEAVGRSSGSSPAMETRGRGTS 1007

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +3

Query: 75  SPWR-STFAPPHPSPPRRL---TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSS 242
           SP R ST +  HP+PP R    T     +PP +       P+ R +    +R T P   S
Sbjct: 115 SPARPSTESVAHPAPPTRPANPTPTPTSSPPKTAARPINAPISRPAIP--SRPTAPTPRS 172

Query: 243 SITGASTVPP-AGGWLRRCSRESTAS 317
           +   +S VPP AGG   R  + ST S
Sbjct: 173 ANKPSSPVPPSAGGKDPRAGQTSTTS 198

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +3

Query: 78  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 257
           P R+  A P P PP R        PP  ++  PL  LP  + +G      P    S++G+
Sbjct: 314 PSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSGPPP---PPPPLSVSGS 370

Query: 258 STVPP 272
              PP
Sbjct: 371 VAPPP 375

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
 Frame = +3

Query: 6   LSSARLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLS--LWSTPL 179
           +SS    S  R   L +  F    P   T  PP P PPR  +   + +P  S  +   P 
Sbjct: 309 VSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPCVPPAPE 368

Query: 180 CPLPRRSTAGGARRTCPA----TSSSITGASTVP 269
             LPR  T G     CP+    T  S    +T P
Sbjct: 369 VALPRPVTQGAGPGKCPSPNLQTQESPVATATSP 402

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +3

Query: 78  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 257
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPPSMAGS 366

Query: 258 STVPP 272
           +  PP
Sbjct: 367 TAPPP 371

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>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 24.6 bits (52), Expect(2) = 2.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 184  PSPGARQQAAPAERVRRLLRRSP 252
            P+P ARQ   P ER R + R  P
Sbjct: 1416 PTPSARQVPEPGERSRTMPRTVP 1438



 Score = 24.6 bits (52), Expect(2) = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 72   QSPWRSTFAPPHPSPPRR 125
            Q+P+  TF PP P+P  R
Sbjct: 1404 QNPYGMTFQPPPPTPSAR 1421

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>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
 Frame = +3

Query: 198 STAGGARRTCPATSSSITGASTVPPAGGWLRRCSRESTASXXXXXXXXXXXXXXXXXXXC 377
           +TA     +  + S+S TGAST  P+       +  ST++                    
Sbjct: 323 TTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAE- 381

Query: 378 SLALHPLSAPTSLHRTCSKCRTRSLSP-STMIFPEFTSVVT 497
           S    P S PT+   T S+  T + SP ST +    TS  T
Sbjct: 382 STTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATT 422



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 24/114 (21%), Positives = 37/114 (32%)
 Frame = +3

Query: 168 STPLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWLRRCSRESTASXXXXXXXXXX 347
           STP    P  +T   A  T P T+S+ T  +T           +  +TA+          
Sbjct: 155 STPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTA-ATTTAATTTAATTTAATTTAA 213

Query: 348 XXXXXXXXXCSLALHPLSAPTSLHRTCSKCRTRSLSPSTMIFPEFTSVVTILRT 509
                     +      +A T+   T S   T + + ST      T+  T   T
Sbjct: 214 TTTAATTTAATTTAATTTAATTTAATTSSATTAATTSSTTTAATTTAATTTAAT 267

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>PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 398

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -1

Query: 399 IEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQSMHR*STKKSPDTF 220
           I DVG +S A      V + +  AAT  W   L    GA  +Q        + K + +  
Sbjct: 293 ILDVGPQSVA-----RVHAAIDDAATLVWNGPL----GAFEMQPFDRGTVAAAKHAAERT 343

Query: 219 CGRRLLSSAGGGDTVA 172
             ++L+S AGGGDTVA
Sbjct: 344 KAKKLISIAGGGDTVA 359

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>VG03_ICHV1 (Q00115) Hypothetical gene 3 protein|
          Length = 302

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 99  PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 251
           PP PSP    TC    + P SL S+P+ P P  S    A    P+ +  IT
Sbjct: 182 PPPPSPSDDTTC-EIPSLPSSLVSSPVNPAPMYSPVSDAPLNTPSPNMMIT 231

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>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
 Frame = +3

Query: 198 STAGGARRTCPATSSSITGASTVPPAGGWLRRCSRESTASXXXXXXXXXXXXXXXXXXXC 377
           +TA     +  + S+S TGAST  P+       +  ST++                    
Sbjct: 254 TTAATTTGSPTSGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAE- 312

Query: 378 SLALHPLSAPTSLHRTCSKCRTRSLSP-STMIFPEFTSVVT 497
           S    P S PT+   T S+  T + SP ST +    TS  T
Sbjct: 313 STTEAPTSTPTTDTTTPSEATTATTSPESTTVSASTTSATT 353

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
 Frame = +3

Query: 27  SSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------LCPL 188
           S  RRS        R+SP  +   PP P PPRR    R    P     TP        P 
Sbjct: 556 SRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRR----RRSPTPPPRRRTPSPPPRRRSPS 611

Query: 189 PRRSTAGGARRTCPATSSSITGASTVPP 272
           PRR +    RR  P+       AS  PP
Sbjct: 612 PRRYSPPIQRRYSPSPPPKRRTASPPPP 639

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +3

Query: 78  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 257
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPLSMAGS 366

Query: 258 STVPP 272
           +  PP
Sbjct: 367 TAPPP 371

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>FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)|
          Length = 68

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 254 CIDCATCRWMAPEVFKRVDGQ--SAVAAQPTSEETRTKALQALLSCPTSSIR 403
           C+    C   AP VF + D    + + A+P +++ R  A +A   CP+ ++R
Sbjct: 11  CVGAGLCALTAPGVFDQDDDGIVTVLTAEPAADDDRRTAREAGHLCPSGAVR 62

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = +3

Query: 102  PHPSPPRRLTCVRADAPPLSLWSTPLCPL-----PRRSTAGGARRTCPATSSSITGASTV 266
            P PSPPR   C+ AD   LS  S  +  L     P R   G A+   PA    I G  + 
Sbjct: 2543 PRPSPPRPDVCM-ADPEGLSSESGRVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSP 2601

Query: 267  PPAGGWLRRCSR 302
             P  G + R SR
Sbjct: 2602 TPGKGPVDRTSR 2613

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>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
 Frame = +3

Query: 90  TFAPPHPSPPRRLTCVRADA-----PPLSLWSTPLCPLPRR---------STAGGARRTC 227
           T  PP  SP  ++T ++  A     P ++  +   CP+P           S  G  R+TC
Sbjct: 360 TTTPPKTSPVPKVTIIKTPAQMYPGPTVTKTAPHTCPMPTMTKIQVHPTASRTGTPRQTC 419

Query: 228 PAT 236
           PAT
Sbjct: 420 PAT 422

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 17/88 (19%)
 Frame = +3

Query: 60  NFTRQSPWRSTFAPPHPS----PPRRLTCVRADAPP-------------LSLWSTPLCPL 188
           N  + +P   T APP P+    PP + + + A  PP             LS  S PL PL
Sbjct: 366 NSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSASSIPLAPL 425

Query: 189 PRRSTAGGARRTCPATSSSITGASTVPP 272
           P            P+ ++S+  A   PP
Sbjct: 426 PPPPP--------PSVATSVPSAPPPPP 445

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>PEPA_ASPAW (P17946) Aspergillopepsin A precursor (EC 3.4.23.18)|
          Length = 394

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
 Frame = +2

Query: 221 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 400
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQNTANDGLLGLAFSSI 197

Query: 401 RTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 529
            T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

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>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/70 (32%), Positives = 29/70 (41%)
 Frame = +3

Query: 72  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 251
           Q P R++ A P P PPR       +APP SL  +        STA       P    +I 
Sbjct: 274 QGPPRTSLALPPPLPPR-------EAPPPSLPDS-------NSTALATSAQTPTVRKTIV 319

Query: 252 GASTVPPAGG 281
             +T PP  G
Sbjct: 320 TLNTPPPTTG 329

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>WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 precursor|
           (Putative protease inhibitor WAP1)
          Length = 224

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 172 RHCVPSPGARQQAAPAERVRRLLRRSPVHRLCHLQVDGSG 291
           R CVP    +  + P +++R L   SP++ LCH   D SG
Sbjct: 68  RQCVPRVSVKLGSCPEDQLRCL---SPMNHLCHKDSDCSG 104

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>DEND_HUMAN (O94850) Dendrin|
          Length = 657

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -2

Query: 449 GTCSALGACPVQACRCG*RM*GKRARPAVPWSWFPRRWVAPPRRTGRRLS*TPPEP 282
           G+ +A    P  A R    + G R        WFP+ W+  P++   R S T P P
Sbjct: 295 GSATAAPCAPHPAPRSRHHLKGSREGKEGEQIWFPKCWIPSPKKQPPRHSQTLPRP 350

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>M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kinase 14 (EC|
           2.7.11.25) (NF-kappa beta-inducing kinase)
           (Serine/threonine-protein kinase NIK) (HsNIK)
          Length = 947

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   KLSSARLGSSHRRSALETENFTRQSPWRSTFAPP-HPSPPRRLTCVRADAPPLSLWSTPL 179
           ++S+A LG    R+  +      +SPWR  +  P HP P +        A P  L     
Sbjct: 641 RVSAAELGGKVNRALQQVGGL--KSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRAP 698

Query: 180 CPLPRRSTAGGARRTCPATSSSITGASTVPP 272
            P P   T G A +  P         +  PP
Sbjct: 699 GPRPAEETTGRAPKLQPPLPPEPPEPNKSPP 729

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>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +3

Query: 66   TRQSPWRSTFA------PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTC 227
            TR +P   +FA       P P PP+RL+ V     P SL  T     P+    G  RRT 
Sbjct: 847  TRGTPRSQSFALRARRKGPPPPPPKRLSSVSGSTEPPSLDGT---SGPKEGATGPRRRTL 903

Query: 228  PATSSSITGASTVP 269
                S  TG S  P
Sbjct: 904  ----SEPTGPSESP 913

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +3

Query: 69  RQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAG----GARRTCPAT 236
           R+SP       P P P RR    R  +PP+    +P  P P+R TA       RR  P+ 
Sbjct: 564 RRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSP-SPPPKRRTASPPPPPKRRASPSP 622

Query: 237 SSSITGASTVPP 272
            S    + + PP
Sbjct: 623 QSKRRVSHSPPP 634



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 37/133 (27%), Positives = 50/133 (37%)
 Frame = +3

Query: 78  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 257
           P R T +PP   PP+R    RA   P S       P P++ ++  A+R  P+ SS     
Sbjct: 603 PKRRTASPP--PPPKR----RASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKG 656

Query: 258 STVPPAGGWLRRCSRESTASXXXXXXXXXXXXXXXXXXXCSLALHPLSAPTSLHRTCSKC 437
           S  PP+     R +RE+ +                       A H  S+P  L R  S  
Sbjct: 657 S--PPS-----RSNRETRSPPQNKRDSPSPRPR---------ASHTSSSPPPLRRGASAS 700

Query: 438 RTRSLSPSTMIFP 476
             R  SPS    P
Sbjct: 701 PQRRQSPSPSTRP 713

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>PEPA_ASPSA (Q12567) Aspergillopepsin A precursor (EC 3.4.23.18)|
           (Aspergillopepsin I)
          Length = 394

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
 Frame = +2

Query: 221 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 400
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQDTANDGLLGLAFSSI 197

Query: 401 RTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 529
            T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

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>PEPA_ASPNG (P55325) Aspergillopepsin A precursor (EC 3.4.23.18)|
          Length = 394

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
 Frame = +2

Query: 221 NVSGDFFVDHRCIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 400
           + SGD + D   +   T    A E   ++          +SE  +  A   LL    SSI
Sbjct: 148 SASGDVYRDTVTVGGVTTNKQAVEAASKI----------SSEFVQDTANDGLLGLAFSSI 197

Query: 401 RTDKPAQ-----DMLQVQNTFPL---PIDDDLPGVYLCGYHSENSY-GATSY 529
            T +P       D ++ Q   PL    +  D PGVY  GY  ++ Y G+ +Y
Sbjct: 198 NTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY 249

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>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)|
          Length = 2025

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/84 (23%), Positives = 32/84 (38%)
 Frame = +3

Query: 18  RLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRR 197
           R    HR  + ET +   QSP     + PHP+ P        ++PP      P+C +   
Sbjct: 480 RSSDPHRPESRETHHSNTQSP---EVSHPHPASPVDPYLRTKNSPPFLKSDHPVCHVSGP 536

Query: 198 STAGGARRTCPATSSSITGASTVP 269
              G   ++  A    +  A + P
Sbjct: 537 EVVGSGFQSSVAVRCMLPSAPSTP 560

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>ASCL2_RAT (P19360) Achaete-scute homolog 2|
          Length = 260

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +3

Query: 99  PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTA---GGARRTCPATSSSITGASTV- 266
           PPHP P    +C    AP       P+   P  + +   GGA      TSS + GA T  
Sbjct: 41  PPHPVPREHFSC---GAP------KPVAGAPALNASLMDGGALPRLVPTSSGVAGACTAR 91

Query: 267 -PPAGGWLRRCSR 302
             P    L RCSR
Sbjct: 92  RRPPSPELLRCSR 104

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>CUT2_CAEEL (P34682) Cuticlin-2 precursor|
          Length = 231

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = +3

Query: 96  APPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT----GAST 263
           APP P PP    C     PPL L    L  L   S  GG     P  ++ I     G +T
Sbjct: 30  APPPPPPP--CGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYAT 87

Query: 264 VP--PAGGW 284
            P  P GG+
Sbjct: 88  APAAPVGGY 96

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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 99  PPHPSPPRRL--TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPP 272
           PP P PP  L  + V A A        P  PLP     GG     P  +++I GA     
Sbjct: 178 PPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAK---- 233

Query: 273 AGGWLRRCSRESTAS 317
               LR+ S++  AS
Sbjct: 234 ----LRKVSKQEEAS 244

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>ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 57   ENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCP 185
            E+FT+  P  S F PP PSP    + +  D   L  W+T L P
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPLSPDEDSLLAWNTSLPP 1618

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>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
 Frame = +3

Query: 57   ENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA------- 215
            E+FT+  P  S F PP PSP    + V  D   L  W+  L P     T   A       
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAGPETWTSAPSLPRLV 1635

Query: 216  ----RRTCPATSSSITGASTV 266
                R TC A  +  +  S+V
Sbjct: 1636 HEPVRCTCSAQGTGFSCPSSV 1656

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>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
 Frame = +3

Query: 69   RQSPWRSTFAPPHPSPPRRLTCVRADAPPL--SLWSTPLCPLPRRSTAGGARRTCPATSS 242
            +Q     T  P  P PPR +      APP      S    P P R      R+       
Sbjct: 1095 QQKDSSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARERVWSTRKAQERPRR 1154

Query: 243  SITGASTVPPAGG 281
               G S +PP GG
Sbjct: 1155 DNLGGSQLPPQGG 1167

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +3

Query: 78  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 257
           P R+  A P P PP R +      PP  ++  P   LP  + +G      P    S+ G 
Sbjct: 314 PSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGP-----PPPPPSVLGV 368

Query: 258 STVPP 272
             V P
Sbjct: 369 GPVAP 373

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>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +3

Query: 90  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 254
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +3

Query: 90  TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 254
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 174 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 281
           P  PLP R+   G RR   A   +  GA+ VP AGG
Sbjct: 59  PPGPLPGRAGGTGRRRRRGAPQPAAGGAAPVPAAGG 94

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +3

Query: 36   RRSALETENFTRQSPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 212
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 921  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 980

Query: 213  ARRTCP--ATSSSITGASTVPPAG 278
            A +  P       + G    PP G
Sbjct: 981  APKPDPLKIAKGKLAGPKETPPNG 1004

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>MYCN_HUMAN (P04198) N-myc proto-oncogene protein|
          Length = 464

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = -3

Query: 307 DSLEHLRSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQV 128
           + L+H R  P AG T  +P      AG    A PA    GRGH G     R GA+   ++
Sbjct: 132 EKLQHGRGPPTAGSTAQSPG-----AG---AASPA----GRGHGGAAGAGRAGAALPAEL 179

Query: 127 SRRGGE 110
           +    E
Sbjct: 180 AHPAAE 185

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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
 Frame = +3

Query: 18   RLGSSHRRSALETENFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------L 179
            R GS    SA  T       P  + F    P P   +  +R D PP    + P       
Sbjct: 812  RKGSEPLASAPFTSRPPASEPGAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPSGRPALS 871

Query: 180  CPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 281
             P PR   +G  R   P T  +  G  T  P+GG
Sbjct: 872  APAPRLGVSGSRRLPFP-THRAPPGLLTRVPSGG 904


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,411,261
Number of Sequences: 219361
Number of extensions: 1981748
Number of successful extensions: 8109
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 7340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8070
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result