Clone Name | bart30d07 |
---|---|
Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 70.5 bits (171), Expect = 3e-12 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 5/119 (4%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLP-GRPTGRFTNGYNLADVISQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD P G TGRF+NG +D IS+ L Sbjct: 121 KTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180 Query: 343 GFEMSPKPYL--SMLPHDKILLGLCKIGANYASGGSGILDTTGKG--TLTMRTQVQYFK 507 G + Y+ + ++++ G ++ASGG+G L T + TM Q+ YF+ Sbjct: 181 GVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQ 239
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 65.9 bits (159), Expect = 8e-11 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGR-PTGRFTNGYNLADVISQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD R TGRF+NG +D +++ + Sbjct: 200 KTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259 Query: 343 GFEMSPKPYL--SMLPHDKILLGLCKIGANYASGGSGILDTTGK--GTLTMRTQVQYFK 507 G + YL + P+D + G ++ASGG+G TT + + M Q+ YF+ Sbjct: 260 GVKEIVPAYLDPKIQPNDLL------TGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQ 312
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 43.1 bits (100), Expect = 5e-04 Identities = 33/91 (36%), Positives = 45/91 (49%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357 A++ FGDS D G L A +A P+G G P GR+ +G + D I++ LG Sbjct: 30 AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL--- 83 Query: 358 PKPYLSMLPHDKILLGLCKIGANYASGGSGI 450 PYLS D + GAN+A+ GS I Sbjct: 84 --PYLSAF-LDSVGSNFSH-GANFATAGSPI 110
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 41.2 bits (95), Expect = 0.002 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357 A++ FGDS D G P N PYG R TGR+++G + D I++ Sbjct: 34 AIFNFGDSNSDTGGKAAAFYPL---NPPYGETFFHRSTGRYSDGRLIIDFIAESFNL--- 87 Query: 358 PKPYLSMLPHDKILLGLCKIGANYASGGSGI-LDTT 462 PYLS P+ L K GA++A+ GS I L TT Sbjct: 88 --PYLS--PYLSSLGSNFKHGADFATAGSTIKLPTT 119
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 33.1 bits (74), Expect = 0.56 Identities = 33/95 (34%), Positives = 39/95 (41%), Gaps = 5/95 (5%) Frame = +1 Query: 175 NAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNG-----YNLADVISQR 339 N +YVFGDSL D GNN GR T NG YN D I+Q+ Sbjct: 26 NNLYVFGDSLSDGGNN-------------------GRYTVDGINGTESKLYN--DFIAQQ 64 Query: 340 LGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGS 444 LG E L+ K G NYA+GG+ Sbjct: 65 LGIE---------------LVNSKKGGTNYAAGGA 84
>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1268 Score = 32.7 bits (73), Expect = 0.73 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +2 Query: 23 PLPLASYHSHSESLQQRPWRGALL 94 PL L Y S S+QQ+PW GALL Sbjct: 470 PLSLLRYSQESSSIQQQPWYGALL 493
>HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 367 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +1 Query: 199 SLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSM 378 S++ +G+N+ P+P+A R PG + L +V+S+ GF +S S Sbjct: 39 SIIKLGSNENPLGPSPKAVRALVETAPGANIYPSADARELREVLSKYTGFPVS-NIVASG 97 Query: 379 LPHDKILLGLCKI 417 D +L GLC+I Sbjct: 98 PGMDGLLDGLCRI 110
>RSUA_SALTY (P65840) Ribosomal small subunit pseudouridine synthase A (EC| 5.4.99.-) (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (rRNA-uridine isomerase A) (rRNA pseudouridylate synthase A) Length = 231 Score = 29.6 bits (65), Expect = 6.2 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Frame = +3 Query: 345 FRDEPQAVPLHAAARQDLTRP----LQDWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEG 512 F DEP A LHAA R D+ + D Q R I PRHH ++ SPV + Sbjct: 86 FLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR-ITSPRHHCEKTYLVTLESPVADDT 144 Query: 513 GGQ 521 Q Sbjct: 145 AAQ 147
>RSUA_SALTI (P65841) Ribosomal small subunit pseudouridine synthase A (EC| 5.4.99.-) (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (rRNA-uridine isomerase A) (rRNA pseudouridylate synthase A) Length = 231 Score = 29.6 bits (65), Expect = 6.2 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Frame = +3 Query: 345 FRDEPQAVPLHAAARQDLTRP----LQDWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEG 512 F DEP A LHAA R D+ + D Q R I PRHH ++ SPV + Sbjct: 86 FLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR-ITSPRHHCEKTYLVTLESPVADDT 144 Query: 513 GGQ 521 Q Sbjct: 145 AAQ 147
>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 368 Score = 29.6 bits (65), Expect = 6.2 Identities = 20/74 (27%), Positives = 37/74 (50%) Frame = +1 Query: 196 DSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLS 375 +S++ +G+N+ P+P+A + PG + + L + +S+ GF +S S Sbjct: 39 ESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELREALSKYTGFPVS-NIVAS 97 Query: 376 MLPHDKILLGLCKI 417 D +L GLC+I Sbjct: 98 GPGMDGLLDGLCRI 111
>SP3_CHICK (Q90WR8) Transcription factor Sp3| Length = 771 Score = 29.3 bits (64), Expect = 8.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3 Query: 450 PRHHGKRDAHDADTSPVLQEGGGQHDLLPKQEEHL 554 P GKR A T P +EGGG+ L K+++H+ Sbjct: 578 PHQEGKRLRRVACTCPNCKEGGGRGSNLGKKKQHI 612 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,227,702 Number of Sequences: 219361 Number of extensions: 1306018 Number of successful extensions: 4518 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4508 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)