ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30d06 |
|---|---|
| Clone Library Name | barley_pub |
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 209 bits (531), Expect = 6e-54 Identities = 108/129 (83%), Positives = 110/129 (85%) Frame = +2 Query: 197 AAPSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRP 376 AAPSRVGRKQR+QKGPEAAARLPNVAP MEEEFVAAQERLRP Sbjct: 36 AAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRP 95 Query: 377 TEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPG 556 TE+KTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPG Sbjct: 96 TEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPG 155 Query: 557 CSILMHNKV 583 CSILMHNKV Sbjct: 156 CSILMHNKV 164
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 162 bits (409), Expect = 9e-40 Identities = 79/127 (62%), Positives = 98/127 (77%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 P+RVG+K+RR KGP+AA +LP V P ME+EF+ QERL+P + Sbjct: 29 PTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQD 88 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 EK EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKDQLEPGCS Sbjct: 89 EKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCS 148 Query: 563 ILMHNKV 583 +L+++KV Sbjct: 149 VLLNHKV 155
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 5e-38 Identities = 76/127 (59%), Positives = 98/127 (77%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 P+RVG+K+++ KGP+AA++LP V P MEEEF+ QE+++P E Sbjct: 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLE 89 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 EK EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKD LEPGCS Sbjct: 90 EKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCS 149 Query: 563 ILMHNKV 583 +L+++KV Sbjct: 150 VLLNHKV 156
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 5e-38 Identities = 76/127 (59%), Positives = 98/127 (77%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 P+RVG+K+++ KGP+AA++LP V P MEEEF+ QE+++P E Sbjct: 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLE 89 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 EK EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKD LEPGCS Sbjct: 90 EKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCS 149 Query: 563 ILMHNKV 583 +L+++KV Sbjct: 150 VLLNHKV 156
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 5e-38 Identities = 76/127 (59%), Positives = 98/127 (77%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 P+RVG+K+++ KGP+AA++LP V P MEEEF+ QE+++P E Sbjct: 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLE 89 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 EK EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKD LEPGCS Sbjct: 90 EKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCS 149 Query: 563 ILMHNKV 583 +L+++KV Sbjct: 150 VLLNHKV 156
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 153 bits (387), Expect = 3e-37 Identities = 75/127 (59%), Positives = 97/127 (76%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 P+RVG+K+++ KGP+AA++ P V P MEEEF+ QE+++P E Sbjct: 30 PTRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLE 89 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 EK EE+RSKVDDLRGTPMSVG+LEEIID++HAIVS+SVG E+YV ILSFVDKD LEPGCS Sbjct: 90 EKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCS 149 Query: 563 ILMHNKV 583 +L+++KV Sbjct: 150 VLLNHKV 156
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 151 bits (381), Expect = 2e-36 Identities = 71/126 (56%), Positives = 96/126 (76%) Frame = +2 Query: 203 PSRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTE 382 PSR+G+K++ KGP+AA++LP V P ME+EF+ QERL+P E Sbjct: 33 PSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQE 92 Query: 383 EKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 562 E+ EE+R+KVD+LRGTPM+VGSLEEIID+ HAIVS++VG E+YV I+SFVDK+QLEPGCS Sbjct: 93 ERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCS 152 Query: 563 ILMHNK 580 +L+++K Sbjct: 153 VLLNHK 158
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 145 bits (367), Expect = 6e-35 Identities = 70/127 (55%), Positives = 96/127 (75%), Gaps = 1/127 (0%) Frame = +2 Query: 203 PSRVGRKQRR-QKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPT 379 P+R GR++++ Q GP+A+A+LP V P MEEE+V QERL+P Sbjct: 36 PTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQ 95 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 +E+T+E+R++VD++RGTPMSVG+LEEIID+ HAIVS++ GPEYYV I+SFVDKD LEPGC Sbjct: 96 DERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGC 154 Query: 560 SILMHNK 580 S+L+H+K Sbjct: 155 SVLLHHK 161
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 125 bits (313), Expect = 1e-28 Identities = 60/125 (48%), Positives = 86/125 (68%) Frame = +2 Query: 206 SRVGRKQRRQKGPEAAARLPNVAPXXXXXXXXXXXXXXXXXXXMEEEFVAAQERLRPTEE 385 S+ GRK+R+ GP A +LPN+ P +EEEFV+ E L+P E+ Sbjct: 29 SKFGRKKRKG-GPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEK 87 Query: 386 KTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSI 565 K EE++ +++++RG P+S+G+LEEIID+ HAIV+S P+YYV ILSFVDK+ LEPGCS+ Sbjct: 88 KQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSV 147 Query: 566 LMHNK 580 L+H+K Sbjct: 148 LLHHK 152
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 61.2 bits (147), Expect = 2e-09 Identities = 25/68 (36%), Positives = 44/68 (64%) Frame = +2 Query: 371 RPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLE 550 R E++ + +V ++ P+ +G E +D++HAIV S+ G YYV +LS +D++ L+ Sbjct: 62 RNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLK 121 Query: 551 PGCSILMH 574 PGCS+ +H Sbjct: 122 PGCSVALH 129
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/80 (33%), Positives = 49/80 (61%) Frame = +2 Query: 341 EEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGI 520 +E +E LR E E+ RS + ++ P+ VG++EEI+D+ IV SS GP++ + Sbjct: 70 DEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNV 129 Query: 521 LSFVDKDQLEPGCSILMHNK 580 VD+++LEPG ++ ++ + Sbjct: 130 SPTVDRNELEPGANVALNQQ 149
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 54.3 bits (129), Expect = 3e-07 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEED-----RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGP 502 E EF+ QE E+K + + +V ++ P+ +G E +D++ AIV S+ G Sbjct: 50 ELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGS 109 Query: 503 EYYVGILSFVDKDQLEPGCSILMH 574 YYV ILS +D++ L+P S+ +H Sbjct: 110 NYYVRILSTIDRELLKPNASVALH 133
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 54.3 bits (129), Expect = 3e-07 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEED-----RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGP 502 E EF+ QE E+K + + +V ++ P+ +G E +D++ AIV S+ G Sbjct: 50 ELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGS 109 Query: 503 EYYVGILSFVDKDQLEPGCSILMH 574 YYV ILS +D++ L+P S+ +H Sbjct: 110 NYYVRILSTIDRELLKPNASVALH 133
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 53.1 bits (126), Expect = 6e-07 Identities = 24/81 (29%), Positives = 52/81 (64%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVG 517 E++F+ + ER+R E + RS+V+ LR P+ VG + +I+++ +V SS GP++ V Sbjct: 33 EKKFIES-ERIR-YEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVN 90 Query: 518 ILSFVDKDQLEPGCSILMHNK 580 ++++++L+PG + ++ + Sbjct: 91 TSQYINEEELKPGARVALNQQ 111
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 52.4 bits (124), Expect = 1e-06 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 5/84 (5%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEED-----RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGP 502 E EF+ QE E+K + + +V ++ P+ +G E +D++ AIV+S+ G Sbjct: 50 ELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGS 109 Query: 503 EYYVGILSFVDKDQLEPGCSILMH 574 YYV ++S +D++ L+P S+ +H Sbjct: 110 NYYVRMVSTIDRELLKPNASVALH 133
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 51.6 bits (122), Expect = 2e-06 Identities = 24/80 (30%), Positives = 47/80 (58%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 ++EE++ ++R E ++ +V ++ P+ +G E +D++ IV S+ G YYV Sbjct: 53 VQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYV 110 Query: 515 GILSFVDKDQLEPGCSILMH 574 ILS +D++ L+P S+ +H Sbjct: 111 RILSTIDRELLKPSASVALH 130
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 5/82 (6%) Frame = +2 Query: 344 EFVAAQERLRPTEEKTEED-----RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEY 508 EF QE E+K + + +V ++ P+ +G E++D+++ IV S+ G Y Sbjct: 42 EFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNY 101 Query: 509 YVGILSFVDKDQLEPGCSILMH 574 YV ILS ++++ L+P S+ +H Sbjct: 102 YVRILSTINRELLKPSASVALH 123
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 50.8 bits (120), Expect = 3e-06 Identities = 24/77 (31%), Positives = 48/77 (62%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 ++EE+V ++ L+ + + +V ++ P+ +G E+ID+++AIV S+ G YYV Sbjct: 51 IQEEYV--KDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYV 108 Query: 515 GILSFVDKDQLEPGCSI 565 ILS ++++ L+P S+ Sbjct: 109 RILSTINRELLKPSASV 125
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 50.8 bits (120), Expect = 3e-06 Identities = 25/80 (31%), Positives = 46/80 (57%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 ++EE++ ++R E ++ K ++ P+ +G E ID++ IV SS G Y V Sbjct: 57 LQEEYIKDEQRSLKRELVRAQEEIK--RIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVV 114 Query: 515 GILSFVDKDQLEPGCSILMH 574 ILS +D+++L+P S+ +H Sbjct: 115 RILSTLDREKLKPSSSVALH 134
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 50.1 bits (118), Expect = 5e-06 Identities = 25/80 (31%), Positives = 48/80 (60%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 ++E+++ ++R E K ++ +V ++ P+ +G E ID++ IVSS+ G Y V Sbjct: 63 LQEDYIKDEQRHLKRELKRAQE--EVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVV 120 Query: 515 GILSFVDKDQLEPGCSILMH 574 ILS +D++ L+P S+ +H Sbjct: 121 RILSTLDRELLKPSMSVALH 140
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 48.5 bits (114), Expect = 1e-05 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = +2 Query: 359 QERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDK 538 ++ + + + R ++D ++ P+ +G E ID S AIV S+ G + V ILS VD+ Sbjct: 31 RKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNFVVRILSTVDR 90 Query: 539 DQLEPGCSILMH 574 + L+P ++ +H Sbjct: 91 ELLKPNTTVALH 102
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 48.1 bits (113), Expect = 2e-05 Identities = 19/81 (23%), Positives = 45/81 (55%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVG 517 +++ + ER R + + + R +++ R P+ + ++ E++D+ V S+ GP + + Sbjct: 42 KDKLLIENERTR-LDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVIN 100 Query: 518 ILSFVDKDQLEPGCSILMHNK 580 F+D+ QLEPG + ++ + Sbjct: 101 YSRFIDRKQLEPGARVALNQQ 121
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/76 (34%), Positives = 42/76 (55%) Frame = +2 Query: 353 AAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFV 532 A +ERL E + RS++ LR P GS+ E++D+ AIV + GP + V I ++ Sbjct: 35 ADKERL---ERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWI 91 Query: 533 DKDQLEPGCSILMHNK 580 DK +L PG + + + Sbjct: 92 DKSKLRPGTRVALDQR 107
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 46.6 bits (109), Expect = 5e-05 Identities = 24/76 (31%), Positives = 43/76 (56%) Frame = +2 Query: 353 AAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFV 532 A +ERL E + RS++ LR P G++ E++D+ AIV + GP + V I ++ Sbjct: 38 ADKERL---ERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWI 94 Query: 533 DKDQLEPGCSILMHNK 580 ++D+L PG + + + Sbjct: 95 ERDKLRPGARVALDQR 110
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 46.2 bits (108), Expect = 7e-05 Identities = 25/76 (32%), Positives = 42/76 (55%) Frame = +2 Query: 353 AAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFV 532 A +ERL E + RS++ LR P G++ E++DE AIV + GP + V I ++ Sbjct: 38 ADKERL---ERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWI 94 Query: 533 DKDQLEPGCSILMHNK 580 D+ +L PG + + + Sbjct: 95 DRKKLRPGTRVALDQR 110
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/67 (28%), Positives = 41/67 (61%) Frame = +2 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 +++ E + ++D LR P+ +G++ + ++E A+V SS GP + V + FVD + + PG Sbjct: 52 KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGA 111 Query: 560 SILMHNK 580 + ++ + Sbjct: 112 RVCLNQQ 118
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/76 (30%), Positives = 43/76 (56%) Frame = +2 Query: 353 AAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFV 532 A +ERL E + R ++ LR P G++ E++D+ AIV + GP + V I ++ Sbjct: 36 ADKERL---ERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWI 92 Query: 533 DKDQLEPGCSILMHNK 580 ++D+L+PG + + + Sbjct: 93 ERDKLKPGARVALDQR 108
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/79 (29%), Positives = 45/79 (56%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 ++E F+ +E + + + + +V ++ P+ +G E ID++ AIV S+ G Y V Sbjct: 25 LQEGFI--KEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVV 82 Query: 515 GILSFVDKDQLEPGCSILM 571 ILS +D++ L+P S+ + Sbjct: 83 RILSTLDRELLKPSASVAL 101
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 44.7 bits (104), Expect = 2e-04 Identities = 17/65 (26%), Positives = 41/65 (63%) Frame = +2 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 E + + +S++D ++ +P+ +G++ ++I IV SS GP++ V + ++D+ +L PG Sbjct: 63 EREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGA 122 Query: 560 SILMH 574 + ++ Sbjct: 123 KVALN 127
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 44.7 bits (104), Expect = 2e-04 Identities = 17/65 (26%), Positives = 41/65 (63%) Frame = +2 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 E + + +S++D ++ +P+ +G++ ++I IV SS GP++ V + ++D+ +L PG Sbjct: 63 EREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGA 122 Query: 560 SILMH 574 + ++ Sbjct: 123 KVALN 127
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/60 (31%), Positives = 35/60 (58%) Frame = +2 Query: 401 RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNK 580 R ++D +R P+ VG++ + + E +V SS GP + V + FV+ D L PG + ++ + Sbjct: 81 RRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQ 140
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/57 (33%), Positives = 34/57 (59%) Frame = +2 Query: 401 RSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM 571 + +V +R P+ +G L E++D + IV S+ G V ILS +D++ L+P S+ + Sbjct: 61 QEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVAL 117
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/67 (26%), Positives = 37/67 (55%) Frame = +2 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 +++ E ++++ L P + E+ID++ +V SS GP V + + VD L+PG Sbjct: 43 QKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGA 102 Query: 560 SILMHNK 580 + ++N+ Sbjct: 103 IVALNNR 109
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 38.9 bits (89), Expect = 0.011 Identities = 17/78 (21%), Positives = 41/78 (52%) Frame = +2 Query: 338 EEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVG 517 +++ ++ +R E+ ++ + + L+ +G + + + E IV +S GP Y VG Sbjct: 71 DDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVG 130 Query: 518 ILSFVDKDQLEPGCSILM 571 + + VD+ +L+ G + + Sbjct: 131 VRNSVDRSKLKKGVRVTL 148
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 38.1 bits (87), Expect = 0.019 Identities = 16/82 (19%), Positives = 43/82 (52%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 +EE+ + Q + ++ +++++ + P+ + +++ + +V SS GP V Sbjct: 23 LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVV 82 Query: 515 GILSFVDKDQLEPGCSILMHNK 580 I S +D+ ++PG S+ ++ + Sbjct: 83 NIASHIDQKLIKPGISVALNQR 104
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 37.7 bits (86), Expect = 0.024 Identities = 19/71 (26%), Positives = 38/71 (53%) Frame = +2 Query: 359 QERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDK 538 +E+L+ ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89 Query: 539 DQLEPGCSILM 571 +L+PG + + Sbjct: 90 SKLKPGTRVAL 100
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.7 bits (86), Expect = 0.024 Identities = 19/71 (26%), Positives = 38/71 (53%) Frame = +2 Query: 359 QERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDK 538 +E+L+ ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89 Query: 539 DQLEPGCSILM 571 +L+PG + + Sbjct: 90 SKLKPGTRVAL 100
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.7 bits (86), Expect = 0.024 Identities = 19/71 (26%), Positives = 38/71 (53%) Frame = +2 Query: 359 QERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDK 538 +E+L+ ++ E+ + + L+ VG + + + E IV ++ GP Y VG +DK Sbjct: 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89 Query: 539 DQLEPGCSILM 571 +L+PG + + Sbjct: 90 SKLKPGTRVAL 100
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/79 (22%), Positives = 37/79 (46%) Frame = +2 Query: 335 MEEEFVAAQERLRPTEEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYV 514 +EE+ + + L + + +++ L P + +I+ + IV SS GP V Sbjct: 23 LEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILPDGKVIVRSSSGPNLIV 82 Query: 515 GILSFVDKDQLEPGCSILM 571 + S +D +L+PG + + Sbjct: 83 NVSSNIDIKKLKPGSLVAL 101
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +2 Query: 380 EEKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGC 559 EE+ ++D DDL + LEE ++ VG+ SF D D L PG Sbjct: 184 EEEFDDDEHDDDDLDNEENELEELEERVEARKKTTEKQSAAALCVGVGSFADPDDL-PGL 242 Query: 560 SILMHNKV 583 + + + V Sbjct: 243 AHFLEHMV 250 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.137 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,989,149 Number of Sequences: 219361 Number of extensions: 446540 Number of successful extensions: 1821 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 1719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1809 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
