Clone Name | bart30d02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 287 bits (145), Expect = 2e-74 Identities = 220/245 (89%) Strand = Plus / Minus Query: 273 gaggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaag 332 |||||||||||||||||||||||||||||||| || || || |||||||||||||| ||| Sbjct: 4175667 gaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaag 4175608 Query: 333 atcgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgtt 392 ||||| | |||| || ||||||||||||||||||||||||||||||| || || || Sbjct: 4175607 atcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtc 4175548 Query: 393 gtggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgcc 452 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4175547 gtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgcc 4175488 Query: 453 gtactagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgag 512 || || |||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4175487 gtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcctcgccgag 4175428 Query: 513 tccga 517 ||||| Sbjct: 4175427 tccga 4175423 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 agcaacaacaacagcaaggg 97 |||||||||||||||||||| Sbjct: 25549921 agcaacaacaacagcaaggg 25549940 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ccccgcctccgatactcccaaggc 62 ||||||||||||||||||| |||| Sbjct: 4175927 ccccgcctccgatactcccgaggc 4175904
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 287 bits (145), Expect = 2e-74 Identities = 220/245 (89%) Strand = Plus / Minus Query: 273 gaggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaag 332 |||||||||||||||||||||||||||||||| || || || |||||||||||||| ||| Sbjct: 4175654 gaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaag 4175595 Query: 333 atcgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgtt 392 ||||| | |||| || ||||||||||||||||||||||||||||||| || || || Sbjct: 4175594 atcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtc 4175535 Query: 393 gtggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgcc 452 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4175534 gtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgcc 4175475 Query: 453 gtactagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgag 512 || || |||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4175474 gtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcctcgccgag 4175415 Query: 513 tccga 517 ||||| Sbjct: 4175414 tccga 4175410 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 agcaacaacaacagcaaggg 97 |||||||||||||||||||| Sbjct: 25478097 agcaacaacaacagcaaggg 25478116 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ccccgcctccgatactcccaaggc 62 ||||||||||||||||||| |||| Sbjct: 4175914 ccccgcctccgatactcccgaggc 4175891
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 287 bits (145), Expect = 2e-74 Identities = 220/245 (89%) Strand = Plus / Minus Query: 273 gaggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaag 332 |||||||||||||||||||||||||||||||| || || || |||||||||||||| ||| Sbjct: 118063 gaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaag 118004 Query: 333 atcgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgtt 392 ||||| | |||| || ||||||||||||||||||||||||||||||| || || || Sbjct: 118003 atcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtc 117944 Query: 393 gtggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgcc 452 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117943 gtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgcc 117884 Query: 453 gtactagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgag 512 || || |||||||| || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117883 gtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcctcgccgag 117824 Query: 513 tccga 517 ||||| Sbjct: 117823 tccga 117819 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ccccgcctccgatactcccaaggc 62 ||||||||||||||||||| |||| Sbjct: 118323 ccccgcctccgatactcccgaggc 118300
>dbj|AK099737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090I09, full insert sequence Length = 1831 Score = 280 bits (141), Expect = 4e-72 Identities = 219/245 (89%) Strand = Plus / Plus Query: 273 gaggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaag 332 |||||||||||||||||||||||||||||||| || || || |||||||||||||| ||| Sbjct: 249 gaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaag 308 Query: 333 atcgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgtt 392 ||||| | |||| || ||||||||||||||||||||||||||||||| || || || Sbjct: 309 atcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtc 368 Query: 393 gtggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgcc 452 || ||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 369 gtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgcc 428 Query: 453 gtactagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgag 512 || || |||||||| || |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 429 gtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcttcgccgag 488 Query: 513 tccga 517 ||||| Sbjct: 489 tccga 493
>gb|BT024020.1| Zea mays clone EL01N0555A06 mRNA sequence Length = 1898 Score = 216 bits (109), Expect = 5e-53 Identities = 219/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 264 tgccgggttgaggcgaagatccgggagatcttcatgccggccctcagttccaccatgacg 323 |||||| ||||||| ||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 271 tgccggattgaggccaagatccgggaaatcttcatgccagcgctcagctccaccatgacc 330 Query: 324 gagggcaagatcgtcgcctggaacgctgccgaggggga-ccgcctcgccaagggcgaccc 382 ||||||||||||||| |||||| ||| || ||||| || |||||| |||||| ||||||| Sbjct: 331 gagggcaagatcgtctcctggaccgccgctgagggcgacccgccttgccaagagcgaccc 390 Query: 383 tgttgttgttgtggagtctgataaggccgacatggatgtcgagaccttccacgacg-gct 441 || || || || ||||| || |||||||||||||| |||||||||||| |||||| ||| Sbjct: 391 cgtcgtcgtcgtcgagtccgacaaggccgacatggacgtcgagaccttctacgacgagct 450 Query: 442 tcctcgccgccgtactagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgc 501 ||||||||||||| || || ||||| || || || ||||||||||||||||||||||||| Sbjct: 451 tcctcgccgccgtcctcgtgcccgctggcgactcagcgcccgtcggctccgccatcgcgc 510 Query: 502 tcctcgccgagtc 514 | || |||||||| Sbjct: 511 tgcttgccgagtc 523 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 158 ccctgcaatggccggtttcctgcacctccactccacgctgctgccatcggcgtccctgct 217 |||||||||||||||| |||| |||||||| |||||||| || |||||||||||| ||| Sbjct: 165 ccctgcaatggccggtctcctccacctccagtccacgcttctcccatcggcgtccgcgct 224 Query: 218 ccgcc 222 ||||| Sbjct: 225 ccgcc 229 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 29 ggctaatccgccccgcctccgatactcccaaggc 62 |||||||||||| ||||||||||||||||||||| Sbjct: 9 ggctaatccgccgcgcctccgatactcccaaggc 42
>ref|XM_482526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1755 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Plus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 222 aagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtg 281 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 | ||| || ||||||||||||||| |||||||||| ||| | || || || || ||| Sbjct: 282 tcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgag 341 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgtacta 458 || || |||||||||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 342 tccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctc 401 Query: 459 gtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccga 517 |||||||| || |||||||| ||||||||| || |||||||||| |||||||||||||| Sbjct: 402 gtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccga 460
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 20854799 aagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtg 20854740 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 | ||| || ||||||||||||||| |||||||||| ||| | || || || || ||| Sbjct: 20854739 tcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgag 20854680 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgtacta 458 || || |||||||||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 20854679 tccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctc 20854620 Query: 459 gtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccga 517 |||||||| || |||||||| ||||||||| || |||||||||| |||||||||||||| Sbjct: 20854619 gtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccga 20854561 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| |||||| |||||||||||| Sbjct: 17821164 gcagcagcagcagcagcagcaacaacagcaa 17821134 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 ggcggcagcagcagcggcagca 81 |||||||||||||||||||||| Sbjct: 728638 ggcggcagcagcagcggcagca 728659
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 33100 aagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtg 33041 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 | ||| || ||||||||||||||| |||||||||| ||| | || || || || ||| Sbjct: 33040 tcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgag 32981 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgtacta 458 || || |||||||||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 32980 tccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctc 32921 Query: 459 gtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccga 517 |||||||| || |||||||| ||||||||| || |||||||||| |||||||||||||| Sbjct: 32920 gtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccga 32862
>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1124_B05 Length = 109917 Score = 204 bits (103), Expect = 2e-49 Identities = 205/239 (85%) Strand = Plus / Minus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 85932 aagatccgggagatcttcatgccggcgctgagctccaccatgacggaagggaagatcgtg 85873 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 | ||| || ||||||||||||||| |||||||||| ||| | || || || || ||| Sbjct: 85872 tcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgag 85813 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgtacta 458 || || |||||||||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 85812 tccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctc 85753 Query: 459 gtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccga 517 |||||||| || |||||||| ||||||||| || |||||||||| |||||||||||||| Sbjct: 85752 gtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccga 85694
>dbj|AK070015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040H11, full insert sequence Length = 1754 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || | |||||||||||||| || |||||||| Sbjct: 221 aagatccgggagatcttcatgccggcgctgggctccaccatgacggaagggaagatcgtg 280 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 | ||| || ||||||||||||||| |||||||||| ||| | || || || || ||| Sbjct: 281 tcgtggtcggccgccgagggggaccgcgtcgccaagggggacgccgtggtggtcgtcgag 340 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgtacta 458 || || |||||||||||||| |||||||| |||||||||||| || |||||||||| || Sbjct: 341 tccgacaaggccgacatggacgtcgagacgttccacgacggcatcgtcgccgccgtcctc 400 Query: 459 gtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtccga 517 |||||||| || |||||||| ||||||||| || |||||||||| |||||||||||||| Sbjct: 401 gtccccgccggtgagtccgcccccgtcggcgcccccatcgcgctgctcgccgagtccga 459
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 159 bits (80), Expect = 1e-35 Identities = 200/240 (83%) Strand = Plus / Plus Query: 275 ggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagat 334 ||||||||| |||||||| ||||||||||| || || || || ||||||||||||||||| Sbjct: 83892 ggcgaagattcgggagatattcatgccggctctgagctcgacgatgacggagggcaagat 83951 Query: 335 cgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgt 394 |||| |||||| || ||||||||||||||| | |||||||||||||| || || || || Sbjct: 83952 cgtctcctggacggcagccgagggggaccgcgtggccaagggcgaccccgtggtggtcgt 84011 Query: 395 ggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgt 454 ||||| || |||||||||||||| || ||||| |||||||||||| | |||| | ||| Sbjct: 84012 cgagtccgacaaggccgacatggacgtggagacgttccacgacggcatagtcgcagtcgt 84071 Query: 455 actagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtc 514 || ||||| || || ||| |||| ||||| ||| || | ||||| |||||||||||||| Sbjct: 84072 cctcgtcccggccggtgagaccgcccccgtaggcgcccctatcgccctcctcgccgagtc 84131
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 4e-35 Identities = 202/243 (83%) Strand = Plus / Minus Query: 275 ggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagat 334 ||||||| | |||||||||||||||||||| || || || || ||||||||||| | ||| Sbjct: 14402591 ggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggat 14402532 Query: 335 cgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgt 394 |||| |||||| || || |||||||||||| |||||||||| ||||| || || || || Sbjct: 14402531 cgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggt 14402472 Query: 395 ggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgt 454 |||||| || ||||| |||||||| || ||||||||| ||||||| || |||||| ||| Sbjct: 14402471 ggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgt 14402412 Query: 455 actagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtc 514 || ||||| || || |||||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 14402411 cctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtc 14402352 Query: 515 cga 517 ||| Sbjct: 14402351 cga 14402349
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 157 bits (79), Expect = 4e-35 Identities = 202/243 (83%) Strand = Plus / Minus Query: 275 ggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagat 334 ||||||| | |||||||||||||||||||| || || || || ||||||||||| | ||| Sbjct: 94394 ggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggat 94335 Query: 335 cgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgt 394 |||| |||||| || || |||||||||||| |||||||||| ||||| || || || || Sbjct: 94334 cgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggt 94275 Query: 395 ggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgt 454 |||||| || ||||| |||||||| || ||||||||| ||||||| || |||||| ||| Sbjct: 94274 ggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgt 94215 Query: 455 actagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtc 514 || ||||| || || |||||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 94214 cctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtc 94155 Query: 515 cga 517 ||| Sbjct: 94154 cga 94152
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 157 bits (79), Expect = 4e-35 Identities = 202/243 (83%) Strand = Plus / Minus Query: 275 ggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagat 334 ||||||| | |||||||||||||||||||| || || || || ||||||||||| | ||| Sbjct: 2156 ggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggat 2097 Query: 335 cgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgt 394 |||| |||||| || || |||||||||||| |||||||||| ||||| || || || || Sbjct: 2096 cgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggt 2037 Query: 395 ggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgt 454 |||||| || ||||| |||||||| || ||||||||| ||||||| || |||||| ||| Sbjct: 2036 ggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgt 1977 Query: 455 actagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtc 514 || ||||| || || |||||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 1976 cctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtc 1917 Query: 515 cga 517 ||| Sbjct: 1916 cga 1914
>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full insert sequence Length = 1752 Score = 157 bits (79), Expect = 4e-35 Identities = 202/243 (83%) Strand = Plus / Plus Query: 275 ggcgaagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagat 334 ||||||| | |||||||||||||||||||| || || || || ||||||||||| | ||| Sbjct: 214 ggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggat 273 Query: 335 cgtcgcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgt 394 |||| |||||| || || |||||||||||| |||||||||| ||||| || || || || Sbjct: 274 cgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggt 333 Query: 395 ggagtctgataaggccgacatggatgtcgagaccttccacgacggcttcctcgccgccgt 454 |||||| || ||||| |||||||| || ||||||||| ||||||| || |||||| ||| Sbjct: 334 ggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgt 393 Query: 455 actagtccccgcgggagagtccgcgcccgtcggctccgccatcgcgctcctcgccgagtc 514 || ||||| || || |||||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 394 cctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtc 453 Query: 515 cga 517 ||| Sbjct: 454 cga 456
>gb|AY106830.1| Zea mays PCO079525 mRNA sequence Length = 439 Score = 147 bits (74), Expect = 4e-32 Identities = 140/162 (86%) Strand = Plus / Plus Query: 279 aagatccgggagatcttcatgccggccctcagttccaccatgacggagggcaagatcgtc 338 |||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 198 aagatccgggagatcttcatgccggcgctgagctccaccatgacggagggcaagatcgtc 257 Query: 339 gcctggaacgctgccgagggggaccgcctcgccaagggcgaccctgttgttgttgtggag 398 ||||| ||||| ||||| || ||| || ||||||| ||| | || || || || ||| Sbjct: 258 tcctggtccgctggagagggtgatcgcgtctccaagggtgacgccgtcgtggtcgtcgag 317 Query: 399 tctgataaggccgacatggatgtcgagaccttccacgacggc 440 ||||| |||||||||||||| || |||||||||||||||||| Sbjct: 318 tctgacaaggccgacatggacgttgagaccttccacgacggc 359
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 291 atcttcatgccggccctcagttccaccatgacggagggcaagatcgt 337 ||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1830156 atcttcatgcctgccctcagctccaccatgacggaggggaagatcgt 1830110
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 291 atcttcatgccggccctcagttccaccatgacggagggcaagatcgt 337 ||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 306301 atcttcatgcctgccctcagctccaccatgactgagggcaagatcgt 306347
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 291 atcttcatgccggccctcagttccaccatgacggagggcaagatcgtcg 339 ||||| ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 672057 atctttatgcctgcccttagctccaccatgacggagggcaagatcgtcg 672105 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 393 gtggagtctgataaggccgacatgga 418 |||||||| ||||||||||||||||| Sbjct: 672159 gtggagtcggataaggccgacatgga 672184
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 292 tcttcatgccggccctcagttccaccatgacggagggcaagatcgtcg 339 |||||||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 541313 tcttcatgcccgccctcagctccactatgaccgagggcaagatcgtcg 541266
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 292 tcttcatgccggccctcagttccaccatgacggagggcaagatcgtcg 339 |||||||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 1079491 tcttcatgcccgccctcagctccactatgaccgagggcaagatcgtcg 1079538
>ref|XM_706218.1| Candida albicans SC5314 hypothetical protein (CaO19.6611), mRNA Length = 459 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 60 ggcggcagcagcagcggcagcaacaacaacagc 92 |||||||||||||||||||||| |||||||||| Sbjct: 237 ggcggcagcagcagcggcagcagcaacaacagc 205
>ref|XM_706217.1| Candida albicans SC5314 hypothetical protein (CaO19.6610), mRNA Length = 2775 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 60 ggcggcagcagcagcggcagcaacaacaacagc 92 |||||||||||||||||||||| |||||||||| Sbjct: 765 ggcggcagcagcagcggcagcagcaacaacagc 797
>emb|X95912.1|AGRNAG1 A.gambiae mRNA for immune factor gambif1 Length = 3215 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaagg 96 |||||||||| ||||||||||||||||||||| Sbjct: 2791 cagcagcagcagcagcaacaacaacagcaagg 2822
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence Length = 214765 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 169025 gcagcagcagcagcagcaacaacaacagcaa 169055
>ref|XM_365019.1| Magnaporthe grisea 70-15 predicted protein (MG09864.4) partial mRNA Length = 1131 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 63 ggcagcagcagcggcagcaacaacaacagca 93 |||||||||||| |||||||||||||||||| Sbjct: 227 ggcagcagcagcagcagcaacaacaacagca 257 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaacagcaa 94 |||| ||||||||||| ||| |||||||| |||||| Sbjct: 226 aggcagcagcagcagcagcaacaacaacagcagcaa 261
>gb|AC132832.13| Mus musculus chromosome 9, clone RP23-48D19, complete sequence Length = 230772 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 50879 gcagcagcagcagcagcaacaacaacagcaa 50849
>ref|XM_958509.1| Neurospora crassa OR74A hypothetical protein (NCU08741.1) partial mRNA Length = 2565 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 738 gcagcagcagcagcagcaacaacaacagcaa 768
>ref|XM_330857.1| Neurospora crassa OR74A hypothetical protein (NCU08741.1) partial mRNA Length = 2565 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 738 gcagcagcagcagcagcaacaacaacagcaa 768
>ref|XM_717806.1| Candida albicans SC5314 hypothetical protein (CaO19_12155), mRNA Length = 3705 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1740 gcagcagcagcagcagcaacaacaacagcaa 1770
>gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-15K8, complete sequence Length = 253000 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 33783 gcagcagcagcagcagcaacaacaacagcaa 33813
>ref|NM_014911.2| Homo sapiens AP2 associated kinase 1 (AAK1), mRNA Length = 3229 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1976 gcagcagcagcagcagcaacaacaacagcaa 2006
>gb|BT012444.1| Drosophila melanogaster RE75049 full insert cDNA Length = 5301 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 4171 gcagcagcagcagcagcaacaacaacagcaa 4201
>emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in linkage group 5, complete sequence Length = 153796 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 12286 gcagcagcagcagcagcaacaacaacagcaa 12316
>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence Length = 252723 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 3645 gcagcagcagcagcagcaacaacaacagcaa 3675
>gb|AY300800.1| Ulmus laevis clone Ulm8 mirosatellite sequence Length = 209 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 116 gcagcagcagcagcagcaacaacaacagcaa 86
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 113156 gcagcagcagcagcagcaacaacaacagcaa 113126 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 |||||| |||| |||||||||||||||||| Sbjct: 113246 gcagcaacagcagcagcaacaacaacagca 113217 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 113212 cagcagcagcagcaacaacaacagca 113187 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 113191 cagcagcagcagcagcaacaacagcagca 113163
>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence Length = 139884 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 80874 gcagcagcagcagcagcaacaacaacagcaa 80904
>gb|BT022130.1| Drosophila melanogaster IP08855 full insert cDNA Length = 2849 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1776 gcagcagcagcagcagcaacaacaacagcaa 1806 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 660 gcagcagcagcagcaacaacaacaacagca 689 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 658 cagcagcagcagcagcaacaacaaca 683
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence Length = 235490 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 219335 gcagcagcagcagcagcaacaacaacagcaa 219305
>emb|AL157711.12| Human DNA sequence from clone RP11-21M8 on chromosome 10 Contains part of the DOCK1 gene for dedicator of cyto-kinesis 1, complete sequence Length = 154818 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 58136 gcagcagcagcagcagcaacaacaacagcaa 58106
>emb|AL031577.1|HS391O22 Human DNA sequence from clone RP3-391O22 on chromosome 6p21.2-21.31 Contains a ribosomal protein L44 (RPL44) pseudogene, the 3' end of gene FLJ32402, a ribosomal protein L7 (RPL7) pseudogene and an interferon induced transmembrane protein 2 (1-8D) or 3 (1-8U) (IFITM2, IFITM3) pseudogene, complete sequence Length = 126807 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 54215 gcagcagcagcagcagcaacaacaacagcaa 54245
>gb|AC010053.7| Drosophila melanogaster 3L BAC RP98-6H19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 128765 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 7660 gcagcagcagcagcagcaacaacaacagcaa 7690 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 6390 gcagcagcagcagcaacaacaacaacagca 6419 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 6388 cagcagcagcagcagcaacaacaaca 6413
>gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome 14, complete sequence Length = 205109 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 121018 gcagcagcagcagcagcaacaacaacagcaa 120988
>emb|BX842595.1| Neurospora crassa DNA linkage group II BAC clone B24N4 Length = 64258 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 32190 gcagcagcagcagcagcaacaacaacagcaa 32160
>gb|AC162301.3| Mus musculus chromosome 15, clone RP24-282H6, complete sequence Length = 171176 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 ||||||||||||||||||||||| ||||||| Sbjct: 80051 cagcagcagcggcagcaacaacagcagcaag 80081
>dbj|AB028971.1| Homo sapiens mRNA for KIAA1048 protein, partial cds Length = 4506 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1983 gcagcagcagcagcagcaacaacaacagcaa 2013
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 74037 gcagcagcagcagcagcaacaacaacagcaa 74007 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 63 ggcagcagcagcggcagcaacaacaacagcaa 94 |||||||||||| ||||||||| ||||||||| Sbjct: 142350 ggcagcagcagcagcagcaacagcaacagcaa 142319 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 90091 gcagcagcagcagcagcaacaacagcagca 90062 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 73686 gcagcagcagcagcagcagcaacaacagca 73657 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 73683 gcagcagcagcagcagcaacaacagcagca 73654 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 7566 cagcagcagcagcaacaacaacagca 7591 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 90093 cagcagcagcagcagcagcaacaacagca 90065
>gb|AC010033.8| Drosophila melanogaster 3L BAC RP98-3I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 188653 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 134147 gcagcagcagcagcagcaacaacaacagcaa 134177 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 132877 gcagcagcagcagcaacaacaacaacagca 132906 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 132875 cagcagcagcagcagcaacaacaaca 132900 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaa 88 ||||||||||| ||||||||||||| Sbjct: 72577 gcagcagcagcagcagcaacaacaa 72553
>dbj|AK056043.1| Homo sapiens cDNA FLJ31481 fis, clone NT2NE2001660, weakly similar to PROBABLE SERINE/THREONINE-PROTEIN KINASE YNL020C (EC 2.7.1.-) Length = 2604 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1911 gcagcagcagcagcagcaacaacaacagcaa 1941
>gb|AC010713.5| Drosophila melanogaster 3L BAC RP98-17E13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 77028 gcagcagcagcagcagcaacaacaacagcaa 77058 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 135232 gcagcagcagcagcagcaacaacaaca 135258 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 aggcggcagcagcagcggcagc 80 |||||||||||||||||||||| Sbjct: 47110 aggcggcagcagcagcggcagc 47089
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 9231 gcagcagcagcagcagcaacaacaacagcaa 9201 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 63 ggcagcagcagcggcagcaacaacaacagcaa 94 |||||||||||| ||||||||| ||||||||| Sbjct: 77540 ggcagcagcagcagcagcaacagcaacagcaa 77509 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaac 89 ||||||||||| |||||||||||||| Sbjct: 126014 gcagcagcagcagcagcaacaacaac 125989 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 25285 gcagcagcagcagcagcaacaacagcagca 25256 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 8880 gcagcagcagcagcagcagcaacaacagca 8851 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 8877 gcagcagcagcagcagcaacaacagcagca 8848 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 125648 cagcagcagcagcagcaacaacagcagca 125620 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 25287 cagcagcagcagcagcagcaacaacagca 25259
>ref|NM_168546.1| Drosophila melanogaster CG10732-RA, transcript variant A (CG10732), mRNA Length = 5086 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 4171 gcagcagcagcagcagcaacaacaacagcaa 4201
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 2030 gcagcagcagcagcagcaacaacaacagcaa 2060 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 2384 gcagcagcagcagcagcaacaacagcagca 2413 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 2381 gcagcagcagcagcagcagcaacaacagca 2410 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 1636 gcagcagcagcagcagcaacaacagcagca 1665 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 1634 cagcagcagcagcagcagcaacaacagca 1662
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1257 gcagcagcagcagcagcaacaacaacagcaa 1287 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 1611 gcagcagcagcagcagcaacaacagcagca 1640 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 1608 gcagcagcagcagcagcagcaacaacagca 1637 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 863 gcagcagcagcagcagcaacaacagcagca 892 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 861 cagcagcagcagcagcagcaacaacagca 889
>dbj|AB210107.1| Rattus norvegicus Numbl mRNA for Numb-like, complete cds Length = 1854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1329 gcagcagcagcagcagcaacaacaacagcaa 1359
>ref|NM_142644.1| Drosophila melanogaster CG5466-RA (CG5466), mRNA Length = 2879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 1103 cagcagcagcagcagcaacaacaacagcaag 1133
>ref|NM_140224.1| Drosophila melanogaster CG7368-RA (CG7368), mRNA Length = 1593 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1443 gcagcagcagcagcagcaacaacaacagcaa 1473 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 327 gcagcagcagcagcaacaacaacaacagca 356 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 325 cagcagcagcagcagcaacaacaaca 350
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1177 gcagcagcagcagcagcaacaacaacagcaa 1207 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 1531 gcagcagcagcagcagcaacaacagcagca 1560 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 1528 gcagcagcagcagcagcagcaacaacagca 1557 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 783 gcagcagcagcagcagcaacaacagcagca 812 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 781 cagcagcagcagcagcagcaacaacagca 809
>gb|AY060383.1| Drosophila melanogaster LD27620 full length cDNA Length = 1979 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 175 cagcagcagcagcagcaacaacaacagcaag 205
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 966078 gcagcagcagcagcagcaacaacaacagcaa 966108 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 185582 gcagcagcagcagcaacaacaacaacagca 185611 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 185580 cagcagcagcagcagcaacaacaaca 185605
>tpg|BK005744.1| TPA: TPA_exp: Drosophila melanogaster dosage compensation complex binding fragment 12, complete sequence Length = 5163 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 2420 gcagcagcagcagcagcaacaacaacagcaa 2390 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 2069 gcagcagcagcagcagcagcaacaacagca 2040 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 2066 gcagcagcagcagcagcaacaacagcagca 2037
>gb|AC159480.5| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168310 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 49033 gcagcagcagcagcagcaacaacaacagcaa 49003
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 110848 gcagcagcagcagcagcaacaacaacagcaa 110818 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagc 92 ||||||| ||| ||||||||||||||||| Sbjct: 173406 gcagcagtagcagcagcaacaacaacagc 173434
>gb|AC007813.4|AC007813 Drosophila melanogaster, chromosome 3R, region 91C-91D, BAC clone BACR40J10, complete sequence Length = 160089 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 124349 gcagcagcagcagcagcaacaacaacagcaa 124379 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 11825 gcagcagcagcagcagcaacaacaaca 11851 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 11828 gcagcagcagcagcaacaacaacaacagca 11857
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 29200 cagcagcagcagcagcaacaacaacagcaag 29230
>gb|AC007757.5|AC007757 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR13J19, complete sequence Length = 170939 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 141172 cagcagcagcagcagcaacaacaacagcaag 141202
>gb|AC079121.5| Homo sapiens BAC clone RP11-368O9 from 2, complete sequence Length = 79228 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 37417 gcagcagcagcagcagcaacaacaacagcaa 37387
>gb|BT024452.1| Drosophila melanogaster GH15831 full insert cDNA Length = 2893 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 1098 cagcagcagcagcagcaacaacaacagcaag 1128
>gb|AC126677.3| Mus musculus BAC clone RP24-156D14 from chromosome 9, complete sequence Length = 152468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 133625 gcagcagcagcagcagcaacaacaacagcaa 133595
>emb|AJ339059.1|HSA339059 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DC7R Length = 924 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 |||||||| |||||||||||||||||||||| Sbjct: 633 gcagcagctgcggcagcaacaacaacagcaa 663
>gb|BC111965.1| Homo sapiens AP2 associated kinase 1, mRNA (cDNA clone MGC:138170 IMAGE:8327433), complete cds Length = 2662 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1623 gcagcagcagcagcagcaacaacaacagcaa 1653
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 570 gcagcagcagcagcagcaacaacaacagcaa 600 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 |||||| |||| |||||||||||||||||| Sbjct: 957 gcagcaacagcagcagcaacaacaacagca 986 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 927 gcagcagcagcagcagcaacaacagcagca 956 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 924 gcagcagcagcagcagcagcaacaacagca 953
>ref|NM_210388.1| Eremothecium gossypii AER177Wp (AER177W), mRNA Length = 2376 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1464 gcagcagcagcagcagcaacaacaacagcaa 1494
>gb|BC104842.1| Homo sapiens AP2 associated kinase 1, mRNA (cDNA clone MGC:132502 IMAGE:8143845), complete cds Length = 2662 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1623 gcagcagcagcagcagcaacaacaacagcaa 1653
>gb|DQ002786.1| Aegilops tauschii clone 8-B08 alpha-gliadin storage protein pseudogene, partial sequence Length = 783 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 324 gcagcagcagcagcagcaacaacaacagcaa 354
>gb|DQ002596.1| Aegilops tauschii clone 10719-05 alpha-gliadin storage protein gene, partial cds Length = 816 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 345 gcagcagcagcagcagcaacaacaacagcaa 375
>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete sequence Length = 230001 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaag 95 |||||||||| |||||||||||||||||||| Sbjct: 95415 cagcagcagcagcagcaacaacaacagcaag 95445
>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the complete sequence Length = 255619 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 220482 gcagcagcagcagcagcaacaacaacagcaa 220512 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 107958 gcagcagcagcagcagcaacaacaaca 107984 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 107961 gcagcagcagcagcaacaacaacaacagca 107990
>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete sequence Length = 272100 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 244435 gcagcagcagcagcagcaacaacaacagcaa 244465 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagc 92 ||||||| ||| ||||||||||||||||| Sbjct: 181877 gcagcagtagcagcagcaacaacaacagc 181849
>gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41 of 83 of the complete sequence Length = 280378 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 152595 gcagcagcagcagcagcaacaacaacagcaa 152625 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 151325 gcagcagcagcagcaacaacaacaacagca 151354 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 151323 cagcagcagcagcagcaacaacaaca 151348 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaa 88 ||||||||||| ||||||||||||| Sbjct: 91025 gcagcagcagcagcagcaacaacaa 91001
>gb|AE003538.4| Drosophila melanogaster chromosome 3L, section 47 of 83 of the complete sequence Length = 303314 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 302240 gcagcagcagcagcagcaacaacaacagcaa 302270 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 aggcggcagcagcagcggcagc 80 |||||||||||||||||||||| Sbjct: 272322 aggcggcagcagcagcggcagc 272301
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 91158 gcagcagcagcagcagcaacaacaacagcaa 91128 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 63 ggcagcagcagcggcagcaacaacaacagcaa 94 |||||||||||| ||||||||| ||||||||| Sbjct: 159471 ggcagcagcagcagcagcaacagcaacagcaa 159440 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaac 89 ||||||||||| |||||||||||||| Sbjct: 207585 gcagcagcagcagcagcaacaacaac 207560 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 107212 gcagcagcagcagcagcaacaacagcagca 107183 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 90807 gcagcagcagcagcagcagcaacaacagca 90778 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 90804 gcagcagcagcagcagcaacaacagcagca 90775 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 24687 cagcagcagcagcaacaacaacagca 24712 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 207219 cagcagcagcagcagcaacaacagcagca 207191 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 107214 cagcagcagcagcagcagcaacaacagca 107186
>ref|NM_001033888.1| Rattus norvegicus numb-like (Numbl), mRNA Length = 1854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 1329 gcagcagcagcagcagcaacaacaacagcaa 1359
>gb|AC131797.3| Mus musculus BAC clone RP24-496C20 from 1, complete sequence Length = 139995 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 41010 gcagcagcagcagcagcaacaacaacagcaa 40980
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 108408 gcagcagcagcagcagcaacaacaacagcaa 108378
>emb|AL807756.9| Mouse DNA sequence from clone RP23-36M9 on chromosome 4, complete sequence Length = 247528 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| ||||||||||||||||||| Sbjct: 40707 gcagcagcagcagcagcaacaacaacagcaa 40677
>gb|AC121812.3| Mus musculus chromosome 7 clone RP23-454P17, complete sequence Length = 162279 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 61 gcggcagcagcagcggcagcaacaacaaca 90 |||||||||||||| ||||||||||||||| Sbjct: 65334 gcggcagcagcagcagcagcaacaacaaca 65305
>gb|AC163612.3| Mus musculus BAC clone RP23-89N5 from chromosome 16, complete sequence Length = 207953 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 31580 gcagcagcagcagcagcaacaacaacagca 31609
>gb|AC166158.3| Mus musculus BAC clone RP24-244P14 from chromosome 1, complete sequence Length = 170234 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 32399 cagcagcagcagcagcaacaacaacagcaa 32428
>ref|NM_032427.1| Homo sapiens mastermind-like 2 (Drosophila) (MAML2), mRNA Length = 5428 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 3224 cagcagcagcagcagcaacaacaacagcaa 3253 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 3203 cagcagcagcagcagcaacaacagcagca 3231
>ref|NM_021521.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast) (Med12), mRNA Length = 6462 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6075 gcagcagcagcagcagcaacaacaacagca 6104 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 6187 cagcagcagcagcaacaacaacagcaa 6213 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 6052 cagcagcagcagcaacaacaacagca 6077
>gb|AY750959.1| Rattus norvegicus stanniocalcin 1 (Stc1) gene, promoter region Length = 1894 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1755 gcagcagcagcagcagcaacaacaacagca 1784
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 712090 gcagcagcagcagcagcaacaacaacagca 712061
>gb|AF528092.1| Fagus sylvatica microsatllite FS3-04 sequence Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 444 gcagcagcagcagcagcaacaacaacagca 415
>gb|M93690.1|MSQRT1RET Anopheles gambiae RT1 retroposon, complete sequence Length = 8071 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 3170 gcagcagcagcagcagcaacaacaacagca 3199
>gb|AC102438.8| Mus musculus chromosome 5, clone RP24-137F10, complete sequence Length = 205785 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 180403 cagcagcagcagcagcaacaacaacagcaa 180374
>gb|AC145785.2| Xenopus tropicalis clone CH216-102H4, complete sequence Length = 151691 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 9955 gcagcagcagcagcagcaacaacaacagca 9984
>gb|AC092245.2| Drosophila melanogaster clone BACR32C03, complete sequence Length = 128623 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 62 cggcagcagcagcggcagcaacaaca 87 |||||||||||||||||||||||||| Sbjct: 103325 cggcagcagcagcggcagcaacaaca 103350
>gb|DQ507811.1| Phyllotreta nemorum clone AB12 microsatellite sequence Length = 267 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 132 gcagcagcagcagcagcaacaacaacagca 103
>ref|NM_031123.2| Rattus norvegicus stanniocalcin 1 (Stc1), mRNA Length = 2463 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 7 gcagcagcagcagcagcaacaacaacagca 36
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 ||||||||| |||||||||||||||||||| Sbjct: 77744 cagcagcaggggcagcaacaacaacagcaa 77715
>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence Length = 227127 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 202192 gcagcagcagcagcagcaacaacaacagca 202221 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 201472 gcagcagcagcagcagcaacaacaacagca 201501 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 201970 gcagcagcagcagcagcaacaacaaca 201996 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 201757 gcagcagcagcagcagcaacaacaaca 201783 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 202100 cagcagcagcagcaacaacaacagca 202125 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 202078 gcagcagcagcagcagcaacaacagcagca 202107 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 202075 gcagcagcagcagcagcagcaacaacagca 202104 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 202030 gcagcagcagcagcaacaacaacaacagca 202059 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 202028 cagcagcagcagcagcaacaacaaca 202053 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 201929 cagcagcagcagcaacaacaacagca 201954 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 201887 cagcagcagcagcaacaacaacagca 201912 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 201865 gcagcagcagcagcagcaacaacagcagca 201894 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 201862 gcagcagcagcagcagcagcaacaacagca 201891 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 201817 gcagcagcagcagcaacaacaacaacagca 201846 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 201815 cagcagcagcagcagcaacaacaaca 201840 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 201731 cagcagcagcagcaacaacaacagca 201756 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 201668 cagcagcagcagcaacaacaacagca 201693 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 201646 gcagcagcagcagcagcaacaacagcagca 201675 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 201643 gcagcagcagcagcagcagcaacaacagca 201672 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 201563 cagcagcagcagcaacaacaacagca 201588 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| ||| |||||||||||||| Sbjct: 202004 cagcagcagcagcaacaacaacaacagca 202032 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| ||| |||||||||||||| Sbjct: 201791 cagcagcagcagcaacaacaacaacagca 201819 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 201710 cagcagcagcagcagcaacaacagcagca 201738 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| ||| |||||||||||||| Sbjct: 201518 cagcagcagcagcaacaacaacaacagca 201546 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 201497 cagcagcagcagcagcaacaacagcagca 201525
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 291 atcttcatgccggccctcagttccaccatgacggagggcaagatcgtcgcctgg 344 |||||||||||||| || |||||||||||||| || ||||| || ||| ||||| Sbjct: 3943421 atcttcatgccggcgctgagttccaccatgaccgaaggcaaaattgtctcctgg 3943474
>gb|BC057119.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:6830443), partial cds Length = 6642 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6138 gcagcagcagcagcagcaacaacaacagca 6167 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 6250 cagcagcagcagcaacaacaacagcaa 6276 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 6115 cagcagcagcagcaacaacaacagca 6140
>gb|BC057085.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:5719350), complete cds Length = 3321 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 2712 gcagcagcagcagcagcaacaacaacagca 2741 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 2824 cagcagcagcagcaacaacaacagcaa 2850 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 2689 cagcagcagcagcaacaacaacagca 2714
>ref|XM_538072.2| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 1 (LOC480952), mRNA Length = 6927 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6489 gcagcagcagcagcagcaacaacaacagca 6518 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6384 gcagcagcagcagcagcagcaacaacagca 6413
>ref|XM_852111.1| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 6 (LOC480952), mRNA Length = 6921 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6483 gcagcagcagcagcagcaacaacaacagca 6512 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6390 gcagcagcagcagcagcagcaacaacagca 6419 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaacagca 93 |||||||||||||| ||||||||| || ||||| Sbjct: 6456 gcggcagcagcagcagcagcaacagcagcagca 6488
>ref|XM_852067.1| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 5 (LOC480952), mRNA Length = 6840 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6402 gcagcagcagcagcagcaacaacaacagca 6431 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6309 gcagcagcagcagcagcagcaacaacagca 6338 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaacagca 93 |||||||||||||| ||||||||| || ||||| Sbjct: 6375 gcggcagcagcagcagcagcaacagcagcagca 6407
>ref|XM_852023.1| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 4 (LOC480952), mRNA Length = 6931 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6493 gcagcagcagcagcagcaacaacaacagca 6522 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6400 gcagcagcagcagcagcagcaacaacagca 6429 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaacagca 93 |||||||||||||| ||||||||| || ||||| Sbjct: 6466 gcggcagcagcagcagcagcaacagcagcagca 6498
>ref|XM_851982.1| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 3 (LOC480952), mRNA Length = 6706 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6268 gcagcagcagcagcagcaacaacaacagca 6297 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6175 gcagcagcagcagcagcagcaacaacagca 6204 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaacagca 93 |||||||||||||| ||||||||| || ||||| Sbjct: 6241 gcggcagcagcagcagcagcaacagcagcagca 6273
>ref|XM_843682.1| PREDICTED: Canis familiaris similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 KDa component) (ARC240) (CAG repeat protein 45) (OPA-containing pr..., transcript variant 2 (LOC480952), mRNA Length = 6906 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6468 gcagcagcagcagcagcaacaacaacagca 6497 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 6375 gcagcagcagcagcagcagcaacaacagca 6404 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaacagca 93 |||||||||||||| ||||||||| || ||||| Sbjct: 6441 gcggcagcagcagcagcagcaacagcagcagca 6473
>gb|AY364644.1| Chlamydomonas reinhardtii NIMA-related kinase 2 mRNA, complete cds Length = 1962 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaaggg 97 ||||||||||| ||| |||||||||||||||||| Sbjct: 1578 gcagcagcagcagcaacaacaacaacagcaaggg 1611 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 1575 gcagcagcagcagcagcaacaacaaca 1601
>gb|AC124179.4| Mus musculus chromosome 12 clone RP23-198B21, complete sequence Length = 192472 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 126668 cagcagcagcagcagcaacaacaacagcaa 126639
>gb|AY186997.1| Homo sapiens WAMTP1-MAML2 fusion protein mRNA, complete cds Length = 3302 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1577 cagcagcagcagcagcaacaacaacagcaa 1606 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 1556 cagcagcagcagcagcaacaacagcagca 1584
>gb|BT011374.1| Drosophila melanogaster RE01495 full insert cDNA Length = 4012 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 573 gcagcagcagcagcagcaacaacaacagca 602 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 798 cagcagcagcagtagcaacaacaacagc 825
>ref|XR_002599.1| PREDICTED: Mus musculus similar to zinc finger, CCHC domain containing 10 (LOC639326), mRNA Length = 545 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 461 gcagcagcagcagcagcaacaacaacagca 490
>ref|XM_534392.2| PREDICTED: Canis familiaris similar to Nuclear receptor coactivator 6 (Amplified in breast cancer-3 protein) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator-2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-..., transcript variant 1 (LOC477202), mRNA Length = 6872 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 943 gcagcagcagcagcagcaacaacaacagca 972
>ref|XM_751953.1| Ustilago maydis 521 hypothetical protein (UM00899.1) partial mRNA Length = 4335 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1879 cagcagcagcagcagcaacaacaacagcaa 1908
>ref|XM_752332.1| Ustilago maydis 521 hypothetical protein (UM01278.1) partial mRNA Length = 3588 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 538 cagcagcagcagcagcaacaacaacagcaa 567 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 1905 gcagcagcagcagcagcaacaacaaca 1931 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaa 88 ||||||||||| ||||||||||||| Sbjct: 576 gcagcagcagcagcagcaacaacaa 600
>emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in linkage group 15, complete sequence Length = 194916 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 59 aggcggcagcagcagcggcagcaacaacaa 88 |||||||||||||||||||| ||||||||| Sbjct: 189530 aggcggcagcagcagcggcaacaacaacaa 189501
>ref|XM_571214.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE02650) partial mRNA Length = 2214 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 292 gcagcagcagcagcagcaacaacaacagca 321
>gb|AC124546.4| Mus musculus BAC clone RP23-273G17 from chromosome 12, complete sequence Length = 214438 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 89122 cagcagcagctgcagcaacaacaacagcaa 89093
>ref|XM_546872.2| PREDICTED: Canis familiaris similar to THAP domain protein 11 (LOC489752), mRNA Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 549 gcagcagcagcagcagcaacaacaacagca 578 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaaca 90 |||| ||||||||||| ||||||||||||||| Sbjct: 514 aggcagcagcagcagcagcagcaacaacaaca 545 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 522 gcagcagcagcagcaacaacaacaacagca 551
>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence Length = 233422 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||||||||||||||||||| Sbjct: 8406 cagcagcagcggcagcaacaacaaca 8431
>gb|AY211062.1| Tribolium castaneum strain cSM microsatellite sequence Length = 354 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 223 gcagcagcagcagcagcaacaacaacagca 194
>gb|AY211058.1| Tribolium castaneum strain cSM microsatellite sequence Length = 227 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 92 cagcagcagcagcagcaacaacaacagcaa 63
>gb|BC110696.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast), mRNA (cDNA clone IMAGE:5702212), partial cds Length = 3818 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1877 gcagcagcagcagcagcaacaacaacagca 1906 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 1989 cagcagcagcagcaacaacaacagcaa 2015 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 1854 cagcagcagcagcaacaacaacagca 1879
>ref|XM_501210.1| Yarrowia lipolytica CLIB122, YALI0B22176g predicted mRNA Length = 1773 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 669 gcagcagcagcagcagcaacaacaacagca 698
>ref|XM_502753.1| Yarrowia lipolytica CLIB122, YALI0D12628g predicted mRNA Length = 2751 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 2107 cagcagcagcagcagcaacaacaacagcaa 2136
>gb|BT010058.1| Drosophila melanogaster LD15974 full insert cDNA Length = 3457 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 603 gcagcagcagcagcagcaacaacaacagca 632 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 2169 gcagcagcagcagcagcaacaaca 2192
>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence Length = 204891 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 30121 gcagcagcagcagcagcaacaacaacagca 30092
>gb|AY080803.1| Arabidopsis thaliana unknown protein (At2g01690) mRNA, partial cds Length = 1235 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 717 cagcagcagcagcagcaacaacaacagcaa 746
>emb|AJ005175.1|DVAJ5175 Drosophila virilis mRNA for GAGA factor class B-isoform Length = 2805 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1034 gcagcagcagcagcagcaacaacaacagca 1063
>emb|AL035245.1|DMBH61I5 Drosophila melanogaster BAC clone BACH61I5 Length = 29358 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 22517 cagcagcagcagcagcaacaacaacagcaa 22546
>emb|AJ290422.1|FRU290422 Fugu rubripes gra2 gene (partial), agal gene, rl44 gene, btk gene, ddp gene, _hyp1 gene, met-tRS gene and trap230 gene Length = 47001 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 35430 cagcagcagcagcagcaacaacaacagcaa 35401
>emb|AJ243119.1|XLA243119 Xenopus laevis mRNA for transcription intermediary factor 2 (tif2 gene) Length = 4871 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 3923 gcagcagcagcagcagcaacaacaacagca 3952
>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence Length = 192509 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 837 gcagcagcagcagcagcaacaacaacagca 866
>gb|AC010060.10| Drosophila melanogaster 3L BAC RP98-22J22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200985 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaa 88 |||||||| ||||||||||||||||||||| Sbjct: 54840 aggcggcaccagcagcggcagcaacaacaa 54869 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 41158 cagcagcagcagcagcaacaacagcagca 41186
>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165928 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 112323 gcagcagcagcagcagcaacaacaacagca 112294 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 113147 cagcagcagcagcagcaacaacaaca 113122 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 113145 gcagcagcagcagcaacaacaacaacagca 113116 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 117565 cagcagcagcagcagcaccaacaacagca 117537
>dbj|AK220216.1| Mus musculus mRNA for mKIAA0192 protein Length = 3463 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 3102 gcagcagcagcagcagcaacaacaacagca 3131 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 3214 cagcagcagcagcaacaacaacagcaa 3240 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 3079 cagcagcagcagcaacaacaacagca 3104
>gb|BC112696.1| Bos taurus cDNA clone MGC:137739 IMAGE:8167195, complete cds Length = 1617 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 519 gcagcagcagcagcagcaacaacaacagca 548
>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174616 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 75690 gcagcagcagcagcagcaacaacaacagca 75719 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 92538 gcagcagcagcagcagcaacaaca 92561
>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172784 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 147333 gcagcagcagcagcagcaacaacaacagca 147304 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 148157 cagcagcagcagcagcaacaacaaca 148132 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 148155 gcagcagcagcagcaacaacaacaacagca 148126 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 152575 cagcagcagcagcagcaccaacaacagca 152547
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 106795 cagcagcagcagcagcaacaacaacagcaa 106824
>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181831 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 156534 gcagcagcagcagcagcaacaacaacagca 156563 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 155712 gcagcagcagcagcaacaacaacaacagca 155741 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 155710 cagcagcagcagcagcaacaacaaca 155735 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 151292 cagcagcagcagcagcaccaacaacagca 151320
>tpg|BK003432.1| TPA: TPA_inf: Drosophila melanogaster HDC02532 (HDC02532) gene, complete cds Length = 1138 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 62 cggcagcagcagcggcagcaacaaca 87 |||||||||||||||||||||||||| Sbjct: 847 cggcagcagcagcggcagcaacaaca 822
>gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fosmids 22L1 and 42E12, complete sequence Length = 68774 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 60971 gcagcagcagcagcagcaacaacaacagca 61000 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 59298 gcagcagcagcagcagcaacaacaaca 59324 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 agcagcagcggcagcaacaacaaca 90 ||||||||| ||||||||||||||| Sbjct: 2412 agcagcagcagcagcaacaacaaca 2436 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 64506 gcagcagcagcagcagcaacaaca 64529
>ref|NM_170559.1| Drosophila melanogaster Medea CG1775-RB, transcript variant B (Med), mRNA Length = 3582 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1491 gcagcagcagcagcagcaacaacaacagca 1520
>ref|NM_168413.1| Drosophila melanogaster CG32062-RB, transcript variant B (CG32062), mRNA Length = 6200 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 614 gcagcagcagcagcagcaacaacaacagca 643 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 2354 gcagcagcagcagcagcaacaaca 2377
>ref|NM_168412.1| Drosophila melanogaster CG32062-RD, transcript variant D (CG32062), mRNA Length = 5993 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 614 gcagcagcagcagcagcaacaacaacagca 643 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 2354 gcagcagcagcagcagcaacaaca 2377
>ref|NM_167000.1| Drosophila melanogaster CG32778-RA (CG32778), mRNA Length = 2838 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1539 gcagcagcagcagcagcaacaacaacagca 1568 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 717 gcagcagcagcagcaacaacaacaacagca 746 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 715 cagcagcagcagcagcaacaacaaca 740
>ref|NM_166466.2| Drosophila melanogaster CG10082-RA, transcript variant A (CG10082), mRNA Length = 3504 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 573 gcagcagcagcagcagcaacaacaacagca 602 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 798 cagcagcagcagtagcaacaacaacagc 825
>ref|NM_164376.1| Drosophila melanogaster kismet CG3696-RB, transcript variant B (kis), mRNA Length = 8212 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 3853 cagcagcagcagcagcaacaacaacagcaa 3882
>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA Length = 4422 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1392 gcagcagcagcagcagcaacaacaacagca 1421 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| |||||| |||||||||||| Sbjct: 1620 gcagcagcagcagcagcagcaacaacagcaa 1650
>ref|NM_079871.2| Drosophila melanogaster Medea CG1775-RA, transcript variant A (Med), mRNA Length = 3804 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1713 gcagcagcagcagcagcaacaacaacagca 1742
>ref|NM_078717.2| Drosophila melanogaster kismet CG3696-RA, transcript variant A (kis), mRNA Length = 17918 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 13559 cagcagcagcagcagcaacaacaacagcaa 13588
>ref|NM_001038734.1| Drosophila melanogaster Hr4 CG16902-RC (Hr4), mRNA Length = 6112 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1675 cagcagcagcagcagcaacaacaacagcaa 1704
>gb|AY069496.1| Drosophila melanogaster LD22279 full length cDNA Length = 3244 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1690 gcagcagcagcagcagcaacaacaacagca 1719
>ref|XM_680486.1| PREDICTED: Danio rerio similar to positive cofactor 2 glutamine/Q-rich-associated protein (LOC557418), mRNA Length = 2741 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 583 gcagcagcagcagcagcaacaacaacagca 612
>ref|XM_697531.1| PREDICTED: Danio rerio hypothetical protein LOC554929 (LOC554929), mRNA Length = 2644 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 486 gcagcagcagcagcagcaacaacaacagca 515
>gb|AC099023.1| Drosophila melanogaster, chromosome 2R, region 56X-57A, BAC clone BACR48L22, complete sequence Length = 180814 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||||||||||||| |||||||| Sbjct: 154376 gcagcagcagcggcagcaacaccaacagca 154405 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 138691 gcagcagcagcagcagcaacaacaaca 138717 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagcaagg 96 ||||||||||| ||||||||| ||||| ||||| Sbjct: 6192 gcagcagcagcagcagcaacagcaacatcaagg 6224
>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone BACR23F24, complete sequence Length = 183592 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||||||||||||| |||||||| Sbjct: 111715 gcagcagcagcggcagcaacaccaacagca 111686 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 127400 gcagcagcagcagcagcaacaacaaca 127374
>emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in linkage group 21, complete sequence Length = 124133 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 47044 gcagcagcagcagcagcaacaacaacagca 47015
>gb|AY971884.1| Drosophila melanogaster hormone receptor 4 (Hr4) mRNA, complete cds Length = 6113 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1675 cagcagcagcagcagcaacaacaacagcaa 1704
>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone BACR34C17, complete sequence Length = 167447 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 106499 gcagcagcagcagcagcaacaacaacagca 106528 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 22767 gcagcagcagcagcagcaacaacaaca 22793 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 106724 cagcagcagcagtagcaacaacaacagc 106751
>gb|AC008371.4| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR22C14, complete sequence Length = 163461 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 39204 cagcagcagcagcagcaacaacaacagcaa 39175
>ref|NM_213073.1| Danio rerio PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein (pcqap), mRNA Length = 2684 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 489 gcagcagcagcagcagcaacaacaacagca 518
>gb|BC045472.1| Danio rerio PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein, mRNA (cDNA clone MGC:55839 IMAGE:3818120), complete cds Length = 2684 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 489 gcagcagcagcagcagcaacaacaacagca 518
>dbj|AK051668.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063G20 product:forkhead box P2, full insert sequence Length = 2881 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1131 gcagcagcagcagcagcaacaacaacagca 1160
>dbj|AK012749.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810016G10 product:unclassifiable, full insert sequence Length = 2350 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaaca 90 |||||||||||||| ||||||||||||||| Sbjct: 1795 gcggcagcagcagcagcagcaacaacaaca 1824
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone BACR27L16, complete sequence Length = 182623 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 147444 gcagcagcagcagcagcaacaacaacagca 147415 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| |||||| |||||||||||| Sbjct: 147216 gcagcagcagcagcagcagcaacaacagcaa 147186 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 116414 gcagcagcagcagcagcaacaacagcagca 116443 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 116411 gcagcagcagcagcagcagcaacaacagca 116440
>gb|AC153586.7| Mus musculus 6 BAC RP23-88E13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188553 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaaca 90 |||||||||||||| ||||||||||||||| Sbjct: 153876 gcggcagcagcagcagcagcaacaacaaca 153905
>gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone BACR13F14, complete sequence Length = 198244 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 194968 gcagcagcagcagcagcaacaacaacagca 194939 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 194743 cagcagcagcagtagcaacaacaacagc 194716
>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone BACR46G10, complete sequence Length = 165158 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 67928 gcagcagcagcagcagcaacaacaacagca 67957 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 68153 cagcagcagcagtagcaacaacaacagc 68180
>gb|AC008310.5|AC008310 Drosophila melanogaster, chromosome 3R, region 100C-100D, BAC clone BACR16C04, complete sequence Length = 159528 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 33999 gcagcagcagcagcagcaacaacaacagca 34028
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 85924 gcagcagcagcagcagcaacaacaacagca 85895 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| |||||| |||||||||||| Sbjct: 85696 gcagcagcagcagcagcagcaacaacagcaa 85666 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 54894 gcagcagcagcagcagcaacaacagcagca 54923 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 54891 gcagcagcagcagcagcagcaacaacagca 54920
>gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, complete sequence Length = 215079 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||||||||||||||||||| Sbjct: 48426 cagcagcagcggcagcaacaacaaca 48401
>gb|AF039232.1|AF039232 Drosophila melanogaster MEDEA (Med) mRNA, complete cds Length = 3253 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1698 gcagcagcagcagcagcaacaacaacagca 1727
>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete sequence Length = 197884 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 98632 gcagcagcagcagcagcaacaacaacagca 98661
>gb|AY040324.1| Homo sapiens MECT1/MAML2 fusion protein (MECT1/MAML2 fusion) mRNA, complete cds Length = 3763 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1559 cagcagcagcagcagcaacaacaacagcaa 1588 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 1538 cagcagcagcagcagcaacaacagcagca 1566
>gb|AY040322.1| Homo sapiens nuclear transcription factor/notch receptor regulator (MAML2) mRNA, complete cds Length = 5419 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 3215 cagcagcagcagcagcaacaacaacagcaa 3244 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 3194 cagcagcagcagcagcaacaacagcagca 3222
>gb|AF215703.1|AF215703 Drosophila melanogaster KISMET-L long isoform (kis) mRNA, complete cds Length = 17424 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 13559 cagcagcagcagcagcaacaacaacagcaa 13588
>gb|AF030197.1|AF030197 Drosophila melanogaster vesicular acetylcholine transporter (VAChT) mRNA, complete cds Length = 7200 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 2684 gcagcagcagcagcagcaacaacaacagca 2713
>gb|AF190405.1|AF190405 Drosophila virilis homeodomain transcription factor Prospero (pros) gene, complete cds Length = 11422 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 3994 gcagcagcagcagcagcaacaacaacagca 4023 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 3112 cagcagcagcagcagcaacaacaacagca 3140
>ref|XM_226464.3| PREDICTED: Rattus norvegicus similar to AT motif-binding factor (LOC307829), mRNA Length = 12065 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 10877 gcagcagcagcagcagcaacaacaacagca 10906 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacag 91 ||||||||||| |||||||||||||||| Sbjct: 6296 gcagcagcagcagcagcaacaacaacag 6323
>ref|XM_573413.1| PREDICTED: Rattus norvegicus similar to meningioma 1 (LOC498194), mRNA Length = 5776 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1975 gcagcagcagcagcagcaacaacaacagca 2004
>ref|XM_216035.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5830434P21 (LOC296637), mRNA Length = 6977 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 2247 gcagcagcagcagcagcaacaacaacagca 2276
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 4066 cagcagcagcagcagcaacaacaacagcaa 4037
>ref|NM_001002050.1| Danio rerio zgc:86607 (zgc:86607), mRNA Length = 1077 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 699 cagcagcagcagcagcaacaacaacagcaa 728
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 291 atcttcatgccggccctcagttccaccatgacggagggcaagatcgtcgcctgg 344 |||||||||||||| || |||||||||||||| || ||||| || ||| ||||| Sbjct: 4356225 atcttcatgccggcgctgagttccaccatgaccgaaggcaaaattgtctcctgg 4356278
>dbj|AK173182.1| Mus musculus mRNA for mKIAA1480 protein Length = 5570 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 186 gcagcagcagcagcagcaacaacaacagca 215 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 298 cagcagcagcagcaacaacaacagcaa 324 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 163 cagcagcagcagcaacaacaacagca 188
>ref|NM_208376.1| Eremothecium gossypii ABR077Cp (ABR077C), mRNA Length = 2121 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1581 gcagcagcagcagcagcaacaacaacagca 1610 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 |||| ||||||||||||||||||| Sbjct: 1542 gcaggagcagcggcagcaacaaca 1565
>gb|BC071310.1| Danio rerio zgc:86607, mRNA (cDNA clone MGC:86607 IMAGE:6892202), complete cds Length = 1077 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 699 cagcagcagcagcagcaacaacaacagcaa 728
>gb|BC078803.1| Rattus norvegicus stanniocalcin 1, mRNA (cDNA clone MGC:93378 IMAGE:7123665), complete cds Length = 2463 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 7 gcagcagcagcagcagcaacaacaacagca 36
>gb|DQ002688.1| Aegilops longissima clone 24_F08 alpha-gliadin storage protein pseudogene, partial sequence Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||||||||||||||||||| Sbjct: 325 cagcagcagcggcagcaacaacaaca 350
>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence Length = 196090 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 122988 cagcagcagcagcagcaacaacaacagcaa 122959
>gb|AY779917.1| Drosophila melanogaster strain NVIII-m11 enhancer of split complex, complete sequence Length = 47170 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 27799 gcagcagcagcagcagcaacaacaacagca 27828 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 agcagcagcggcagcaacaacaacagca 93 ||||||||| |||||||||||| ||||| Sbjct: 37666 agcagcagcagcagcaacaacatcagca 37693
>gb|AF113847.1|AF113847 Drosophila melanogaster kismet (kis) mRNA, complete cds Length = 8238 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 3866 cagcagcagcagcagcaacaacaacagcaa 3895
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 62 cggcagcagcagcggcagcaacaaca 87 |||||||||||||||||||||||||| Sbjct: 69750 cggcagcagcagcggcagcaacaaca 69725
>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete sequence Length = 271902 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||||||||||||| |||||||| Sbjct: 205976 gcagcagcagcggcagcaacaccaacagca 205947 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 221661 gcagcagcagcagcagcaacaacaaca 221635
>gb|AE003779.2| Drosophila melanogaster chromosome 3R, section 117 of 118 of the complete sequence Length = 232050 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 22906 gcagcagcagcagcagcaacaacaacagca 22935
>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete sequence Length = 305900 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 215182 cagcagcagcagcagcaacaacaacagcaa 215153
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete sequence Length = 244140 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 205459 gcagcagcagcagcagcaacaacaacagca 205488 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 25557 cagcagcagcagcagcaacaacaaca 25582 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaaca 87 ||||||||||| |||||||||||| Sbjct: 222307 gcagcagcagcagcagcaacaaca 222330
>gb|AE003533.4| Drosophila melanogaster chromosome 3L, section 52 of 83 of the complete sequence Length = 289141 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaa 88 |||||||| ||||||||||||||||||||| Sbjct: 179396 aggcggcaccagcagcggcagcaacaacaa 179425 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 119102 gcagcagcagcagcagcaacaacaaca 119076 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 165714 cagcagcagcagcagcaacaacagcagca 165742
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 191690 gcagcagcagcagcagcaacaacaacagca 191661 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaa 94 ||||||||||| |||||| |||||||||||| Sbjct: 191462 gcagcagcagcagcagcagcaacaacagcaa 191432 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 160660 gcagcagcagcagcagcaacaacagcagca 160689 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 160657 gcagcagcagcagcagcagcaacaacagca 160686
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 257035 gcagcagcagcagcagcaacaacaacagca 257064 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 173303 gcagcagcagcagcagcaacaacaaca 173329 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagc 92 |||||||||| | ||||||||||||||| Sbjct: 257260 cagcagcagcagtagcaacaacaacagc 257287
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 317088 gcagcagcagcagcagcaacaacaacagca 317117 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 316266 gcagcagcagcagcaacaacaacaacagca 316295 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 316264 cagcagcagcagcagcaacaacaaca 316289 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||| ||||||||||| Sbjct: 311846 cagcagcagcagcagcaccaacaacagca 311874
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 233772 cagcagcagcagcagcaacaacaacagcaa 233801
>emb|X60995.1|DSANTPE1 D.subobscura antennapedia homeotic gene (Antp), exons 4-7 Length = 2016 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1130 cagcagcagcagcagcaacaacaacagcaa 1159
>gb|AC121300.11| Mus musculus chromosome 6, clone RP23-408I12, complete sequence Length = 212218 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 61 gcggcagcagcagcggcagcaacaacaaca 90 |||||||||||||| ||||||||||||||| Sbjct: 1327 gcggcagcagcagcagcagcaacaacaaca 1356
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete sequence Length = 196606 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 52644 cagcagcagcagcagcaacaacaacagcaa 52615 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 52665 cagcagcagcagcagcaacaacagcagca 52637
>gb|BC100267.1| Rattus norvegicus forkhead box P1, mRNA (cDNA clone MGC:116362 IMAGE:7383433), complete cds Length = 2328 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 245 gcagcagcagcagcagcaacaacaacagca 274
>gb|AF071310.1|AF071310 Mus musculus OPA-containing protein 1 mRNA, complete cds Length = 6478 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 6091 gcagcagcagcagcagcaacaacaacagca 6120 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 6203 cagcagcagcagcaacaacaacagcaa 6229 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 6068 cagcagcagcagcaacaacaacagca 6093
>gb|AF099097.1|AF099097 Rattus norvegicus stanniocalcin precursor, gene, 5' flanking region and partial cds Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 617 gcagcagcagcagcagcaacaacaacagca 646
>gb|AF057162.1|AF057162 Drosophila melanogaster Medea (Medea) mRNA, complete cds Length = 2238 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1002 gcagcagcagcagcagcaacaacaacagca 1031
>dbj|AK115178.1| Ciona intestinalis cDNA, clone:cieg037h08, full insert sequence Length = 707 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 279 cagcagcagcagcagcaacaacaacagcaa 308
>gb|AF041439.1|AF041439 Drosophila melanogaster maternal effect enhancer of dpp (Medea) mRNA, complete cds Length = 2849 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1290 gcagcagcagcagcagcaacaacaacagca 1319
>gb|AF027729.1|AF027729 Drosophila melanogaster Medea (Med) mRNA, complete cds Length = 3258 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1696 gcagcagcagcagcagcaacaacaacagca 1725
>gb|AF019754.1|AF019754 Drosophila melanogaster Medea-A (Medea) mRNA, partial cds Length = 2209 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1244 gcagcagcagcagcagcaacaacaacagca 1273
>gb|AF019753.1|AF019753 Drosophila melanogaster Medea-B (Medea) mRNA, complete cds Length = 3030 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 1476 gcagcagcagcagcagcaacaacaacagca 1505
>gb|AC004274.1|AC004274 Drosophila melanogaster DNA sequence (P1 DS07049 (D133)), complete sequence Length = 65196 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 64572 cagcagcagcagcagcaacaacaacagcaa 64601
>ref|NM_001034131.1| Rattus norvegicus forkhead box P1 (Foxp1), mRNA Length = 2328 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 245 gcagcagcagcagcagcaacaacaacagca 274
>gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s DS01995 (D179), DS03499 (D217), and DS08132 (D174)), complete sequence Length = 173970 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||||||||||||| |||||||| Sbjct: 118089 gcagcagcagcggcagcaacaccaacagca 118060 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaaca 90 ||||||||||| ||||||||||||||| Sbjct: 133774 gcagcagcagcagcagcaacaacaaca 133748
>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence Length = 178779 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 126432 cagcagcagcagcagcaacaacaacagcaa 126403
>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence Length = 189301 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 115787 cagcagcagcagcagcaacaacaacagcaa 115816 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 115718 cagcagcagcagcaacaacaacagcaa 115744
>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21, complete sequence Length = 169747 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 126990 gcagcagcagcagcagcaacaacaacagca 127019
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 1576921 cagcagcagcagcagcaacaacaacagcaa 1576892 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||| |||||||||||||| Sbjct: 3586687 gcagcagcagcagcaacaacaacaacagca 3586716 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 3586685 cagcagcagcagcagcaacaacaaca 3586710 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaaca 90 |||||||||| ||||||||||||||| Sbjct: 2625059 cagcagcagcagcagcaacaacaaca 2625084 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 794705 cagcagcagcagcaacaacaacagca 794730
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 2915459 gcagcagcagcagcagcaacaacaacagca 2915488 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaaca 84 ||||||||||||||||||||| Sbjct: 1695968 gcagcagcagcggcagcaaca 1695948 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 cagcggcagcaacaacaacagcaa 94 |||| ||||||||||||||||||| Sbjct: 2354631 cagcagcagcaacaacaacagcaa 2354608
>dbj|AP004472.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT17P02, TM0006, complete sequence Length = 72374 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 58109 gcagcagcagcagcagcaacaacaacagca 58138 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||| ||||||||||||| Sbjct: 58173 cagcagcagcagcagctacaacaacagcaa 58202
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 529468 gcagcagcagcagcagcaacaacaacagca 529439 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaaca 87 |||| ||||||||||||||||||| Sbjct: 529507 gcaggagcagcggcagcaacaaca 529484
>emb|AL589876.11| Mouse DNA sequence from clone RP23-117O11 on chromosome 2, complete sequence Length = 221782 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 79921 gcagcagcagcagcagcaacaacaacagca 79892
>gb|M16362.1|MUSOPA Mouse opa repeat mRNA, 3' end Length = 594 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 81 gcagcagcagcagcagcaacaacaacagca 110 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 193 cagcagcagcagcaacaacaacagcaa 219 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 58 cagcagcagcagcaacaacaacagca 83
>gb|AC124528.4| Mus musculus BAC clone RP23-411B19 from chromosome 1, complete sequence Length = 195050 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 143505 cagcagcagcagcagcaacaacaacagcaa 143534
>dbj|AB058722.1| Homo sapiens mRNA for KIAA1819 protein, partial cds Length = 5419 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagcaa 94 |||||||||| ||||||||||||||||||| Sbjct: 3215 cagcagcagcagcagcaacaacaacagcaa 3244 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||| ||||| Sbjct: 3194 cagcagcagcagcagcaacaacagcagca 3222
>emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on chromosome X, complete sequence Length = 136809 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||||||||| Sbjct: 35582 gcagcagcagcagcagcaacaacaacagca 35611 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagcaa 94 ||||||| ||||||||||||||||||| Sbjct: 36198 cagcagcagcagcaacaacaacagcaa 36224 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 cagcagcggcagcaacaacaacagca 93 ||||||| |||||||||||||||||| Sbjct: 35559 cagcagcagcagcaacaacaacagca 35584
>gb|AY653182.1| Macaca radiata Thap11 (Thap11) gene, partial cds Length = 143 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/35 (91%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaacagca 93 |||| ||||||||||| |||||||||||| ||||| Sbjct: 17 aggcagcagcagcagcagcagcaacaacarcagca 51 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 63 ggcagcagcagcggcagcaacaacaacagca 93 |||||||||||| |||||| |||||||| || Sbjct: 18 ggcagcagcagcagcagcagcaacaacarca 48
>ref|XM_630697.1| Dictyostelium discoideum putative basic-leucine zipper transcription factor (DDB0220088), partial mRNA Length = 2496 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 331 cagcagcagcagcagcaacaacaacagca 359 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 cagcggcagcaacaacaacagcaa 94 |||| ||||||||||||||||||| Sbjct: 355 cagcagcagcaacaacaacagcaa 378
>ref|XM_510088.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 6430527G18; polyglutamine-containing protein (LOC453064), mRNA Length = 2455 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagc 92 ||||||||||| ||||||||||||||||| Sbjct: 1353 gcagcagcagcagcagcaacaacaacagc 1381
>gb|AF380991.1| Musca domestica microsatellite MdCAG32 sequence Length = 360 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagc 92 ||||||||||| ||||||||||||||||| Sbjct: 242 gcagcagcagcagcagcaacaacaacagc 214
>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence Length = 268516 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 46764 cagcagcagcagcagcaacaacaacagca 46792 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||||||||| |||||||| Sbjct: 46823 gcagcagcagcagcagcaacagcaacagca 46852
>gb|AY376475.1| Pan paniscus mitochondrial DNA polymerase gene, partial cds Length = 102 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 60 ggcggcagcagcagcggcagcaacaacaacagc 92 ||||||||||||||| |||||||||||| |||| Sbjct: 20 ggcggcagcagcagcagcagcaacaacagcagc 52 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 60 ggcggcagcagcagcggcagcaacaacaacagca 93 |||||| |||||||| |||||| ||||||||||| Sbjct: 17 ggcggcggcagcagcagcagcagcaacaacagca 50
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence Length = 163517 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagc 92 ||||||||||| ||||||||||||||||| Sbjct: 10115 gcagcagcagcagcagcaacaacaacagc 10143
>ref|XM_588054.2| PREDICTED: Bos taurus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC510844), mRNA Length = 8557 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 59 aggcggcagcagcagcggcagcaacaacaacagcaag 95 |||| ||||||||||| ||||||||||||||| |||| Sbjct: 1915 aggcagcagcagcagcagcagcaacaacaacaacaag 1951
>gb|AY643746.1| Rattus norvegicus SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 (Smarca2) mRNA, complete cds Length = 5928 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 806 cagcagcagcagcagcaacaacaacagca 834
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 46960 cagcagcagcagcagcaacaacaacagca 46988 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 46938 gcagcagcagcagcagcaacaacagcagca 46967 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 46935 gcagcagcagcagcagcagcaacaacagca 46964
>ref|NM_027230.3| Mus musculus protein kinase C binding protein 1 (Prkcbp1), mRNA Length = 5271 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 2675 cagcagcagcagcagcaacaacaacagca 2703
>gb|AY497336.1| Helicoverpa armigera microsatellite HaB60 sequence Length = 231 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 104 cagcagcagcagcagcaacaacaacagca 76 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 64 gcagcagcagcggcagcaacaacaacagcaag 95 ||||||||||| ||| |||||||| ||||||| Sbjct: 102 gcagcagcagcagcaacaacaacagcagcaag 71
>ref|XM_990420.1| PREDICTED: Mus musculus hypothetical protein LOC676487 (LOC676487), mRNA Length = 360 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 192 cagcagcagcagcagcaacaacaacagca 220 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| ||||||||| |||||||| Sbjct: 251 gcagcagcagcagcagcaacagcaacagca 280
>ref|XM_989522.1| PREDICTED: Mus musculus meningioma 1 (Mn1), mRNA Length = 5002 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 65 cagcagcagcggcagcaacaacaacagca 93 |||||||||| |||||||||||||||||| Sbjct: 1558 cagcagcagcagcagcaacaacaacagca 1586 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||||||||| ||||| Sbjct: 1536 gcagcagcagcagcagcaacaacagcagca 1565 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 64 gcagcagcagcggcagcaacaacaacagca 93 ||||||||||| |||||| ||||||||||| Sbjct: 1533 gcagcagcagcagcagcagcaacaacagca 1562 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,401,934 Number of Sequences: 3902068 Number of extensions: 5401934 Number of successful extensions: 271030 Number of sequences better than 10.0: 4688 Number of HSP's better than 10.0 without gapping: 4698 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 226218 Number of HSP's gapped (non-prelim): 42337 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)