ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart30c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT008984.1| Triticum aestivum clone wdk2c.pk007.b15:fis, full... 757 0.0
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 274 3e-70
3dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic D... 274 3e-70
4dbj|AK105605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
5dbj|AB004799.1| Oryza sativa mRNA for ascorbate oxidase, partial... 80 9e-12
6dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
7gb|AF206723.1|AF206723 Brassica juncea isolate BJAO3 ascorbate o... 64 5e-07
8gb|AF206722.1|AF206722 Brassica juncea isolate BJAO2 ascorbate o... 64 5e-07
9ref|NM_147871.1| Arabidopsis thaliana L-ascorbate oxidase/ coppe... 56 1e-04
10gb|BT001074.1| Arabidopsis thaliana At5g21100/T10F18_130 mRNA, c... 56 1e-04
11gb|BT000738.1| Arabidopsis thaliana At5g21105 mRNA sequence 56 1e-04
12gb|BT000672.1| Arabidopsis thaliana At5g21105 mRNA sequence 56 1e-04
13gb|AY057577.1| Arabidopsis thaliana At5g21105 mRNA sequence 56 1e-04
14gb|AY050406.1| Arabidopsis thaliana AT5g21100/T10F18_130 mRNA, c... 56 1e-04
15emb|BX829850.1|CNS0A02W Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
16dbj|AB004798.1| Arabidopsis thaliana mRNA for ascorbate oxidase,... 56 1e-04
17gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 geno... 54 5e-04
18gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana... 54 5e-04
19ref|XM_450643.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
20dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
21gb|AF233594.2|AF233594 Cucumis melo ascorbate oxidase AO4 mRNA, ... 50 0.008
22dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
23gb|J04494.1|CUSASCO Cucumber ascorbate oxidase (aso) mRNA, compl... 50 0.008
24dbj|D43624.1|TOBTAOP Tobacco mRNA for ascorbate oxidase precurso... 50 0.008
25gb|AF206721.1|AF206721 Brassica juncea isolate BJAO1 ascorbate o... 48 0.031
26ref|NM_122118.4| Arabidopsis thaliana copper ion binding AT5G211... 46 0.12
27gb|AY099586.1| Arabidopsis thaliana ascorbate oxidase-like prote... 46 0.12
28emb|BX829653.1|CNS0A09E Arabidopsis thaliana Full-length cDNA Co... 46 0.12
29gb|BT003407.1| Arabidopsis thaliana ascorbate oxidase-like prote... 46 0.12
30ref|NM_120146.3| Arabidopsis thaliana copper ion binding AT4G398... 44 0.48
31gb|BT015885.1| Arabidopsis thaliana At4g39830 gene, complete cds 44 0.48
32gb|BT015360.1| Arabidopsis thaliana At4g39830 gene, complete cds 44 0.48
33emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, ... 44 0.48
34emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.48
35emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, B... 44 0.48
36gb|AC159331.9| Mus musculus 10 BAC RP23-218E2 (Roswell Park Canc... 44 0.48
37emb|BX827889.1|CNS0A49W Arabidopsis thaliana Full-length cDNA Co... 44 0.48
38dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
39emb|BX511140.4| Zebrafish DNA sequence from clone DKEY-264G21 in... 44 0.48
40gb|AC153958.2| Mus musculus 10 BAC RP24-541B4 (Roswell Park Canc... 44 0.48
41gb|AC090053.5| Leishmania major strain Friedlin chromosome Unkno... 44 0.48
42gb|AY971876.1| Lycopersicon esculentum ascorbate oxidase (AO) mR... 42 1.9
43ref|XM_361698.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.9
44gb|DQ470894.1| Leptosphaeria maculans isolate AFTOL-ID 277 RNA p... 42 1.9
45emb|Y15295.1|MTY15295 Medicago truncatula mRNA for L-ascorbate o... 42 1.9
46gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, co... 42 1.9
47gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.9
48gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.9
49gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.9
50dbj|AB083032.1| Glycine max mRNA for syringolide-induced protein... 42 1.9
51gb|AF107805.1|AF107805 Sporormiella minima DNA-dependent RNA pol... 42 1.9
52ref|XM_366417.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.5
53ref|XM_985757.1| PREDICTED: Mus musculus gene model 804, (NCBI),... 40 7.5
54gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosom... 40 7.5
55ref|XM_897942.2| PREDICTED: Mus musculus gene model 804, (NCBI),... 40 7.5
56gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, compl... 40 7.5
57emb|AL354979.17| Human DNA sequence from clone RP11-10J18 on chr... 40 7.5
58emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 7.5
59gb|AC009695.7| Homo sapiens chromosome 8, clone RP11-130C12, com... 40 7.5
60gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, compl... 40 7.5
61gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, compl... 40 7.5
62dbj|AK136846.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 7.5
63dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.5
64dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.5
65gb|AF233593.1|AF233593 Cucumis melo ascorbate oxidase AO1 mRNA, ... 40 7.5
66gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.5

>gb|BT008984.1| Triticum aestivum clone wdk2c.pk007.b15:fis, full insert mRNA
           sequence
          Length = 2056

 Score =  757 bits (382), Expect = 0.0
 Identities = 495/534 (92%), Gaps = 14/534 (2%)
 Strand = Plus / Plus

                                                                       
Query: 27  atccattctgccttgaggaaattgtctgaacctttcctccacttactagtcttt-----c 81
           ||||||| |||||||  |||||||| ||||||||||||||||||||||| ||||     |
Sbjct: 8   atccattttgccttggagaaattgtttgaacctttcctccacttactagcctttttcttc 67

                                                                       
Query: 82  ttcctccccattgctgccatgagggcgcctgtggcgttctttgcatggtgcgccctcctc 141
           |||||||||||||||||||||||||| |         |||||||||||||||||||||||
Sbjct: 68  ttcctccccattgctgccatgagggctc---------tctttgcatggtgcgccctcctc 118

                                                                       
Query: 142 ttggcgtgtggcggcctgctgcattgcgcggaggcggccaaggccaggcacctcaagtgg 201
           |||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttggcgtgcggcggcgtgatgcattgcgcggaggcggccaaggccaggcacctcaagtgg 178

                                                                       
Query: 202 gaggtgagccacatgttctggtcgccggactgcgaggagaaggtgctcatcggcatcaac 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gaggtgagccacatgttctggtcgccggactgcgaggagaaggtgctcatcggcatcaac 238

                                                                       
Query: 262 ggccagttccccggccccaccatccgggccaaggccggcgacaccatcgtcgtcgagctc 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggccagttccccggccccaccatccgggccaaggccggcgacaccatcgtcgtcgagctc 298

                                                                       
Query: 322 aagaacgggctgcacaccgagggggtggtcatccactggcacggcgtcagacagattgga 381
           ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 299 aagaacgggctgcacaccgagggcgtcgtcatccactggcacggcgtcagacagattgga 358

                                                                       
Query: 382 acaccgtgggcggatggcacggcggcgatctcccaatgcgccatcaaccccgaggaaacc 441
           || || |||||||| |||||||| || |||||||| |||||||||||||| || ||||||
Sbjct: 359 acgccatgggcggacggcacggccgccatctcccagtgcgccatcaacccggaagaaacc 418

                                                                       
Query: 442 ttcacttaccgatttgtcgtcgacaagccggggacatatttctaccatgggcactacggc 501
           |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 419 ttcacttatcgattcgtcgtcgacaagccggggacatacttctaccacgggcactacggc 478

                                                                 
Query: 502 atgcagagggcggcagggctgtacggctctctgatcgtggatgtggcagatggg 555
           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 479 atgcagagggcggcggggctgtacggctctctgatcgtggatgtggcggatggg 532



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  274 bits (138), Expect = 3e-70
 Identities = 192/210 (91%)
 Strand = Plus / Plus

                                                                            
Query: 166      tgcgcggaggcggccaaggccaggcacctcaagtgggaggtgagccacatgttctggtcg 225
                ||||||| |||||| ||||| |||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 21545604 tgcgcggcggcggcgaaggcgaggcacttcaggtgggaggtgagcaacatgttctggtcg 21545663

                                                                            
Query: 226      ccggactgcgaggagaaggtgctcatcggcatcaacggccagttccccggccccaccatc 285
                ||||||||||||||||||||| | ||||||||||| |||||||||||||| || ||||||
Sbjct: 21545664 ccggactgcgaggagaaggtggtgatcggcatcaatggccagttccccgggccgaccatc 21545723

                                                                            
Query: 286      cgggccaaggccggcgacaccatcgtcgtcgagctcaagaacgggctgcacaccgagggg 345
                || ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| 
Sbjct: 21545724 cgcgccaaggccggcgacaccatcgtcgtccacctcaagaacggcctgcacaccgagggc 21545783

                                              
Query: 346      gtggtcatccactggcacggcgtcagacag 375
                || |||||||||||||||||| ||||||||
Sbjct: 21545784 gtcgtcatccactggcacggcatcagacag 21545813



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 371      gacagattggaacaccgtgggcggatggcacggcggcgatctcccaatgcgccatcaacc 430
                ||||||| || ||||| |||||||||||||||||  |||||||||| |||||||||||||
Sbjct: 21546070 gacagatcgggacaccatgggcggatggcacggcatcgatctcccagtgcgccatcaacc 21546129

                                                      
Query: 431      ccgaggaaaccttcacttaccgatttgtcgtcgacaag 468
                | || ||||||||||| || || || || |||||||||
Sbjct: 21546130 ctgaagaaaccttcacctatcgcttcgttgtcgacaag 21546167



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                            
Query: 467      agccggggacatatttctaccatgggcactacggcatgcagagggcggcagggctgtacg 526
                |||||||||| || |||||||| || |||||||| |||||||||||||| ||||||||||
Sbjct: 21546533 agccggggacgtacttctaccacggccactacgggatgcagagggcggcggggctgtacg 21546592

                                
Query: 527      gctctctgatcgtgga 542
                | || |||||||||||
Sbjct: 21546593 ggtcgctgatcgtgga 21546608



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 332      tgcacaccgagggggtggtcatccactggcacggcgtcagacag 375
                ||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 21603707 tgcacaccgagggcgtcgtcatccactggcacggcatcagacag 21603750



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 56       acctttcctccacttactagtcttt 80
                ||||||||||||||||||| |||||
Sbjct: 21545447 acctttcctccacttactactcttt 21545471



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>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0567G03
          Length = 196834

 Score =  274 bits (138), Expect = 3e-70
 Identities = 192/210 (91%)
 Strand = Plus / Plus

                                                                          
Query: 166    tgcgcggaggcggccaaggccaggcacctcaagtgggaggtgagccacatgttctggtcg 225
              ||||||| |||||| ||||| |||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 102788 tgcgcggcggcggcgaaggcgaggcacttcaggtgggaggtgagcaacatgttctggtcg 102847

                                                                          
Query: 226    ccggactgcgaggagaaggtgctcatcggcatcaacggccagttccccggccccaccatc 285
              ||||||||||||||||||||| | ||||||||||| |||||||||||||| || ||||||
Sbjct: 102848 ccggactgcgaggagaaggtggtgatcggcatcaatggccagttccccgggccgaccatc 102907

                                                                          
Query: 286    cgggccaaggccggcgacaccatcgtcgtcgagctcaagaacgggctgcacaccgagggg 345
              || ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| 
Sbjct: 102908 cgcgccaaggccggcgacaccatcgtcgtccacctcaagaacggcctgcacaccgagggc 102967

                                            
Query: 346    gtggtcatccactggcacggcgtcagacag 375
              || |||||||||||||||||| ||||||||
Sbjct: 102968 gtcgtcatccactggcacggcatcagacag 102997



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                          
Query: 371    gacagattggaacaccgtgggcggatggcacggcggcgatctcccaatgcgccatcaacc 430
              ||||||| || ||||| |||||||||||||||||  |||||||||| |||||||||||||
Sbjct: 103254 gacagatcgggacaccatgggcggatggcacggcatcgatctcccagtgcgccatcaacc 103313

                                                    
Query: 431    ccgaggaaaccttcacttaccgatttgtcgtcgacaag 468
              | || ||||||||||| || || || || |||||||||
Sbjct: 103314 ctgaagaaaccttcacctatcgcttcgttgtcgacaag 103351



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                          
Query: 467    agccggggacatatttctaccatgggcactacggcatgcagagggcggcagggctgtacg 526
              |||||||||| || |||||||| || |||||||| |||||||||||||| ||||||||||
Sbjct: 103717 agccggggacgtacttctaccacggccactacgggatgcagagggcggcggggctgtacg 103776

                              
Query: 527    gctctctgatcgtgga 542
              | || |||||||||||
Sbjct: 103777 ggtcgctgatcgtgga 103792



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 332    tgcacaccgagggggtggtcatccactggcacggcgtcagacag 375
              ||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 160891 tgcacaccgagggcgtcgtcatccactggcacggcatcagacag 160934



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 56     acctttcctccacttactagtcttt 80
              ||||||||||||||||||| |||||
Sbjct: 102631 acctttcctccacttactactcttt 102655



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>dbj|AK105605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A11, full
           insert sequence
          Length = 2191

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 332 tgcacaccgagggggtggtcatccactggcacggcgtcagacagattggaacaccgtggg 391
           ||||||||||||| || |||||||||||||||||| |||||||| |||| || |||||||
Sbjct: 327 tgcacaccgagggcgtcgtcatccactggcacggcatcagacagtttggcacgccgtggg 386

                                          
Query: 392 cggatggcacggcggcgatctcccaatgcgc 422
           |||| || |||||  |||| ||||| |||||
Sbjct: 387 cggacgggacggcatcgatatcccagtgcgc 417



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>dbj|AB004799.1| Oryza sativa mRNA for ascorbate oxidase, partial cds
          Length = 1245

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                       
Query: 332 tgcacaccgagggggtggtcatccactggcacggcgtcagacagattggaacaccgtggg 391
           ||||||||||||| || |||||||||||||||||  |||||||| |||| || |||||||
Sbjct: 266 tgcacaccgagggcgtcgtcatccactggcacggnatcagacagtttggtacgccgtggg 325

                                          
Query: 392 cggatggcacggcggcgatctcccaatgcgc 422
           |||| || |||||  |||| ||||| |||||
Sbjct: 326 cggacgggacggcatcgatatcccagtgcgc 356



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>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062E01
          Length = 161804

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 332  tgcacaccgagggggtggtcatccactggcacggcgtcagacag 375
            ||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 2638 tgcacaccgagggcgtcgtcatccactggcacggcatcagacag 2681



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>gb|AF206723.1|AF206723 Brassica juncea isolate BJAO3 ascorbate oxidase mRNA, partial cds
          Length = 2007

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 328 aagccgggaacacacttctaccatgggcactacggcatgcagag 371



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>gb|AF206722.1|AF206722 Brassica juncea isolate BJAO2 ascorbate oxidase mRNA, partial cds
          Length = 1920

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 332 aagccgggaacacacttctaccatgggcactacggcatgcagag 375



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>ref|NM_147871.1| Arabidopsis thaliana L-ascorbate oxidase/ copper ion binding
           AT5G21105 mRNA, complete cds
          Length = 2053

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 343 aagccgggaacacatttctaccatggacactatggcatgcagag 386



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>gb|BT001074.1| Arabidopsis thaliana At5g21100/T10F18_130 mRNA, complete cds
          Length = 1593

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 217 aagccgggaacacatttctaccatggacactatggcatgcagag 260



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>gb|BT000738.1| Arabidopsis thaliana At5g21105 mRNA sequence
          Length = 2137

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 368 aagccgggaacacatttctaccatggacactatggcatgcagag 411



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>gb|BT000672.1| Arabidopsis thaliana At5g21105 mRNA sequence
          Length = 2168

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 365 aagccgggaacacatttctaccatggacactatggcatgcagag 408



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>gb|AY057577.1| Arabidopsis thaliana At5g21105 mRNA sequence
          Length = 2148

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 365 aagccgggaacacatttctaccatggacactatggcatgcagag 408



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>gb|AY050406.1| Arabidopsis thaliana AT5g21100/T10F18_130 mRNA, complete cds
          Length = 2074

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 361 aagccgggaacacatttctaccatggacactatggcatgcagag 404



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>emb|BX829850.1|CNS0A02W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZF08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2033

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 329 aagccgggaacacatttctaccatggacactatggcatgcagag 372



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>dbj|AB004798.1| Arabidopsis thaliana mRNA for ascorbate oxidase, partial cds
          Length = 2113

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 466 aagccggggacatatttctaccatgggcactacggcatgcagag 509
           |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 330 aagccgggaacacatttctaccatggacactatggcatgcagag 373



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>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete
              sequence
          Length = 112600

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 467    agccggggacatatttctaccatgggcactacggcatgcagag 509
              ||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 101201 agccgggaacacatttctaccatggacactatggcatgcagag 101159



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 470    cggggacatatttctaccatgggcactacggcatgca 506
              |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 105660 cgggaacacatttctaccatggacactacggaatgca 105624



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>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
             V, complete sequence
          Length = 84413

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 467   agccggggacatatttctaccatgggcactacggcatgcagag 509
             ||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct: 36287 agccgggaacacatttctaccatggacactatggcatgcagag 36245



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 470   cggggacatatttctaccatgggcactacggcatgca 506
             |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 40746 cgggaacacatttctaccatggacactacggaatgca 40710



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>ref|XM_450643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1731

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 351 catccactggcacggcgtcagacagattggaacaccgtgggcggatggcacgg 403
           |||||||||||||||| || | ||||| || || ||||||||||| |||||||
Sbjct: 240 catccactggcacggcatccggcagatcggcacgccgtgggcggacggcacgg 292



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 351      catccactggcacggcgtcagacagattggaacaccgtgggcggatggcacgg 403
                |||||||||||||||| || | ||||| || || ||||||||||| |||||||
Sbjct: 11981068 catccactggcacggcatccggcagatcggcacgccgtgggcggacggcacgg 11981016



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 295      gccggcgacaccatcgtcgtcg 316
                ||||||||||||||||||||||
Sbjct: 22000386 gccggcgacaccatcgtcgtcg 22000407



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>gb|AF233594.2|AF233594 Cucumis melo ascorbate oxidase AO4 mRNA, complete cds
          Length = 2122

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 439 accttcacttaccgatttgtcgtcgacaagccggggacatatttctaccatgg 491
           |||||||||||||| ||||| || || ||| | |||||||||||||| |||||
Sbjct: 461 accttcacttaccggtttgtggtagataaggctgggacatatttctatcatgg 513



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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0441A12
          Length = 185437

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 351   catccactggcacggcgtcagacagattggaacaccgtgggcggatggcacgg 403
             |||||||||||||||| || | ||||| || || ||||||||||| |||||||
Sbjct: 85548 catccactggcacggcatccggcagatcggcacgccgtgggcggacggcacgg 85496



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>gb|J04494.1|CUSASCO Cucumber ascorbate oxidase (aso) mRNA, complete cds
          Length = 2153

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 439 accttcacttaccgatttgtcgtcgacaagccggggacatatttctaccatgg 491
           |||||||||||||| ||||| || || ||| | |||||||||||||| |||||
Sbjct: 414 accttcacttaccggtttgtggtagataaggctgggacatatttctatcatgg 466



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>dbj|D43624.1|TOBTAOP Tobacco mRNA for ascorbate oxidase precursor, complete cds
          Length = 2065

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 371 gacagattggaacaccgtgggcggatggcacggcggcgatctcccaatgcgccatcaacc 430
           ||||||| |||||||| ||||| ||||| || || || || |||||||||||||| ||||
Sbjct: 362 gacagatcggaacaccatgggctgatggaactgcagcaatttcccaatgcgccattaacc 421

            
Query: 431 c 431
           |
Sbjct: 422 c 422



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>gb|AF206721.1|AF206721 Brassica juncea isolate BJAO1 ascorbate oxidase mRNA, partial cds
          Length = 1841

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 470 cggggacatatttctaccatgggcactacggcatgcagag 509
           |||| ||| ||||||||||||| |||||||| ||||||||
Sbjct: 358 cgggaacacatttctaccatggacactacgggatgcagag 397



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>ref|NM_122118.4| Arabidopsis thaliana copper ion binding AT5G21100 mRNA, complete
           cds
          Length = 2059

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 460 gtcgacaagccggggacatatttctaccatgggcactacggcatgca 506
           ||||| ||| |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 471 gtcgataaggcgggaacacatttctaccatggacactacggaatgca 517



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>gb|AY099586.1| Arabidopsis thaliana ascorbate oxidase-like protein (At5g21100)
           mRNA, complete cds
          Length = 1995

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 460 gtcgacaagccggggacatatttctaccatgggcactacggcatgca 506
           ||||| ||| |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 457 gtcgataaggcgggaacacatttctaccatggacactacggaatgca 503



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>emb|BX829653.1|CNS0A09E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2002

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 460 gtcgacaagccggggacatatttctaccatgggcactacggcatgca 506
           ||||| ||| |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 471 gtcgataaggcgggaacacatttctaccatggacactacggaatgca 517



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>gb|BT003407.1| Arabidopsis thaliana ascorbate oxidase-like protein (At5g21100)
           mRNA, complete cds
          Length = 1861

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 460 gtcgacaagccggggacatatttctaccatgggcactacggcatgca 506
           ||||| ||| |||| ||| ||||||||||||| |||||||| |||||
Sbjct: 343 gtcgataaggcgggaacacatttctaccatggacactacggaatgca 389



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>ref|NM_120146.3| Arabidopsis thaliana copper ion binding AT4G39830 mRNA, complete
           cds
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 301 gacaccatcgtcgtcgagctcaagaa 326
           ||||||||||| ||||||||||||||
Sbjct: 394 gacaccatcgttgtcgagctcaagaa 419



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>gb|BT015885.1| Arabidopsis thaliana At4g39830 gene, complete cds
          Length = 1749

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 301 gacaccatcgtcgtcgagctcaagaa 326
           ||||||||||| ||||||||||||||
Sbjct: 220 gacaccatcgttgtcgagctcaagaa 245



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>gb|BT015360.1| Arabidopsis thaliana At4g39830 gene, complete cds
          Length = 1915

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 301 gacaccatcgtcgtcgagctcaagaa 326
           ||||||||||| ||||||||||||||
Sbjct: 383 gacaccatcgttgtcgagctcaagaa 408



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>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92
          Length = 112067

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 301  gacaccatcgtcgtcgagctcaagaa 326
            ||||||||||| ||||||||||||||
Sbjct: 6341 gacaccatcgttgtcgagctcaagaa 6366



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>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project)
          Length = 118267

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 301   gacaccatcgtcgtcgagctcaagaa 326
             ||||||||||| ||||||||||||||
Sbjct: 16908 gacaccatcgttgtcgagctcaagaa 16933



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>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project)
          Length = 88343

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 301   gacaccatcgtcgtcgagctcaagaa 326
             ||||||||||| ||||||||||||||
Sbjct: 82462 gacaccatcgttgtcgagctcaagaa 82487



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>gb|AC159331.9| Mus musculus 10 BAC RP23-218E2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 186300

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 65    ccacttactagtctttcttcct 86
             ||||||||||||||||||||||
Sbjct: 18205 ccacttactagtctttcttcct 18184



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>emb|BX827889.1|CNS0A49W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH31ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1943

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 301 gacaccatcgtcgtcgagctcaagaa 326
           ||||||||||| ||||||||||||||
Sbjct: 394 gacaccatcgttgtcgagctcaagaa 419



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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 295   gccggcgacaccatcgtcgtcg 316
             ||||||||||||||||||||||
Sbjct: 42450 gccggcgacaccatcgtcgtcg 42471



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>emb|BX511140.4| Zebrafish DNA sequence from clone DKEY-264G21 in linkage group 20,
            complete sequence
          Length = 166153

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 499  ggcatgcagagggcggcagggctgta 524
            |||||||||| |||||||||||||||
Sbjct: 8001 ggcatgcagaaggcggcagggctgta 8026



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>gb|AC153958.2| Mus musculus 10 BAC RP24-541B4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 176618

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 65    ccacttactagtctttcttcct 86
             ||||||||||||||||||||||
Sbjct: 50345 ccacttactagtctttcttcct 50366



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>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323,
             complete sequence
          Length = 66637

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 284   tccgggccaaggccggcgacaccatcgtcg 313
             |||||||||||||||||||| | |||||||
Sbjct: 23383 tccgggccaaggccggcgacgcgatcgtcg 23412



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>gb|AY971876.1| Lycopersicon esculentum ascorbate oxidase (AO) mRNA, complete cds
          Length = 1984

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 370 agacagattggaacaccgtgggcggatgg 398
           ||||||||||||||||| ||||| |||||
Sbjct: 352 agacagattggaacaccatgggctgatgg 380



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>ref|XM_361698.1| Magnaporthe grisea 70-15 hypothetical protein (MG04172.4) partial
            mRNA
          Length = 2406

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 389  gggcggatggcacggcggcga 409
            |||||||||||||||||||||
Sbjct: 1320 gggcggatggcacggcggcga 1340



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>gb|DQ470894.1| Leptosphaeria maculans isolate AFTOL-ID 277 RNA polymerase II subunit
            2 (RPB2) gene, partial sequence
          Length = 1675

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 300  cgacaccatcgtcgtcgagct 320
            |||||||||||||||||||||
Sbjct: 1325 cgacaccatcgtcgtcgagct 1305



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>emb|Y15295.1|MTY15295 Medicago truncatula mRNA for L-ascorbate oxidase
          Length = 2058

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 475 acatatttctaccatgggcactacggcatgcagagggcggcagggctgtacggctctctg 534
           ||||||||||| ||||| ||||| || ||||| || || |||||| |||| || ||||| 
Sbjct: 404 acatatttctatcatggacactatggtatgcaaagagcagcagggttgtatggttctcta 463

                    
Query: 535 atcgtggat 543
           || ||||||
Sbjct: 464 atagtggat 472



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>gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, complete sequence
          Length = 205753

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     tctttcttcctccccattgct 96
              |||||||||||||||||||||
Sbjct: 178015 tctttcttcctccccattgct 178035



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 291     caaggccggcgacaccatcgt 311
               |||||||||||||||||||||
Sbjct: 2520182 caaggccggcgacaccatcgt 2520162



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 300     cgacaccatcgtcgtcgagctcaag 324
               |||||||||||||||| ||||||||
Sbjct: 2469684 cgacaccatcgtcgtcaagctcaag 2469660



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 289     gccaaggccggcgacaccatcgtcg 313
               |||||||||||||||| ||||||||
Sbjct: 4034665 gccaaggccggcgacagcatcgtcg 4034641



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>dbj|AB083032.1| Glycine max mRNA for syringolide-induced protein B13-1-1, partial
           cds
          Length = 1945

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 351 catccactggcacggcgtcagacagattggaac 383
           |||||||||||||||  | ||||||||||||||
Sbjct: 240 catccactggcacgggataagacagattggaac 272



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>gb|AF107805.1|AF107805 Sporormiella minima DNA-dependent RNA polymerase II RPB140 (RPB2)
            gene, partial cds
          Length = 2811

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 300  cgacaccatcgtcgtcgagct 320
            |||||||||||||||||||||
Sbjct: 2116 cgacaccatcgtcgtcgagct 2096



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>ref|XM_366417.1| Magnaporthe grisea 70-15 hypothetical protein (MG10635.4) partial
            mRNA
          Length = 4869

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 105  ggcgcctgtggcgttctttgcatg 128
            |||||| |||||||||||||||||
Sbjct: 2717 ggcgccggtggcgttctttgcatg 2694



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>ref|XM_985757.1| PREDICTED: Mus musculus gene model 804, (NCBI), transcript variant
           2 (Gm804), mRNA
          Length = 662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 504 gcagagggcggcagggctgt 523
           ||||||||||||||||||||
Sbjct: 594 gcagagggcggcagggctgt 613



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>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete
             sequence
          Length = 199956

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 504   gcagagggcggcagggctgt 523
             ||||||||||||||||||||
Sbjct: 23018 gcagagggcggcagggctgt 23037



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>ref|XM_897942.2| PREDICTED: Mus musculus gene model 804, (NCBI), transcript variant
           2 (Gm804), mRNA
          Length = 662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 504 gcagagggcggcagggctgt 523
           ||||||||||||||||||||
Sbjct: 594 gcagagggcggcagggctgt 613



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>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence
          Length = 188819

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    gcagagggcggcagggctgt 523
              ||||||||||||||||||||
Sbjct: 132918 gcagagggcggcagggctgt 132937



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>emb|AL354979.17| Human DNA sequence from clone RP11-10J18 on chromosome 9, complete
             sequence
          Length = 85997

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    cttcctccccattgctgcca 100
             ||||||||||||||||||||
Sbjct: 26974 cttcctccccattgctgcca 26955



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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ccggcgacaccatcgtcgtc 315
              ||||||||||||||||||||
Sbjct: 237163 ccggcgacaccatcgtcgtc 237182



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>gb|AC009695.7| Homo sapiens chromosome 8, clone RP11-130C12, complete sequence
          Length = 144328

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   gagaaggtgctcatcggcat 257
             ||||||||||||||||||||
Sbjct: 48456 gagaaggtgctcatcggcat 48475



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>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence
          Length = 156545

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    atccattctgccttgaggaa 46
             ||||||||||||||||||||
Sbjct: 32682 atccattctgccttgaggaa 32663



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>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence
          Length = 201564

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    atccattctgccttgaggaa 46
             ||||||||||||||||||||
Sbjct: 29022 atccattctgccttgaggaa 29041



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>dbj|AK136846.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330128C21 product:similar to
           C14ORF29 variant 2 [Homo sapiens], full insert sequence
          Length = 3029

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 504 gcagagggcggcagggctgt 523
           ||||||||||||||||||||
Sbjct: 598 gcagagggcggcagggctgt 617



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 293     aggccggcgacaccatcgtc 312
               ||||||||||||||||||||
Sbjct: 5835752 aggccggcgacaccatcgtc 5835771



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 295     gccggcgacaccatcgtcgt 314
               ||||||||||||||||||||
Sbjct: 4837900 gccggcgacaccatcgtcgt 4837919



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>gb|AF233593.1|AF233593 Cucumis melo ascorbate oxidase AO1 mRNA, complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 440 ccttcacttaccgatttgtcgtcgacaagccggggacatatttctaccatgg 491
           ||||||||||||  || || || || ||||| |||||||||||||| |||||
Sbjct: 443 ccttcacttaccagttcgtagtagataagcctgggacatatttctatcatgg 494



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    caaggccggcgacaccatcg 310
              ||||||||||||||||||||
Sbjct: 122896 caaggccggcgacaccatcg 122915


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,910,567
Number of Sequences: 3902068
Number of extensions: 3910567
Number of successful extensions: 71248
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70425
Number of HSP's gapped (non-prelim): 822
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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