ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart30c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103944.1| Zea mays PCO133356 mRNA sequence 228 2e-56
2ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predic... 184 2e-43
3dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
4dbj|AK064269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
5emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 153 7e-34
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
7emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 153 7e-34
8ref|XM_450039.1| Oryza sativa (japonica cultivar-group), mRNA 94 6e-16
9ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group... 94 6e-16
10dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
11dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
13dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
14gb|AY103559.1| Zea mays PCO112591 mRNA sequence 80 9e-12
15gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (... 68 3e-08
16ref|NM_001031597.1| Gallus gallus poly(A) binding protein, cytop... 58 3e-05
17emb|AJ719881.1| Gallus gallus mRNA for hypothetical protein, clo... 58 3e-05
18emb|CR390628.1| Gallus gallus finished cDNA, clone ChEST353d21 58 3e-05
19gb|AF043297.1|AF043297 Chlamydomonas reinhardtii poly(A) binding... 56 1e-04
20ref|XM_324155.1| Neurospora crassa OR74A hypothetical protein (N... 54 5e-04
21ref|XM_955332.1| Neurospora crassa OR74A hypothetical protein (N... 54 5e-04
22ref|XM_564448.1| Anopheles gambiae str. PEST ENSANGP00000026584 ... 54 5e-04
23ref|XM_309558.2| Anopheles gambiae str. PEST ENSANGP00000022280 ... 54 5e-04
24ref|XM_364660.1| Magnaporthe grisea 70-15 hypothetical protein (... 52 0.002
25ref|XM_417821.1| PREDICTED: Gallus gallus similar to PABPC4 prot... 50 0.008
26emb|BX935872.1| Gallus gallus finished cDNA, clone ChEST164f17 50 0.008
27emb|BX933440.1| Gallus gallus finished cDNA, clone ChEST667m11 50 0.008
28gb|AF032896.1|AF032896 Petromyzon marinus polyadenylate binding ... 50 0.008
29gb|AY616044.1| Prototheca wickerhamii plastid poly(A) binding pr... 48 0.032
30ref|XM_513344.1| PREDICTED: Pan troglodytes similar to PABPC4 pr... 46 0.12
31gb|BC065540.1| Homo sapiens poly(A) binding protein, cytoplasmic... 46 0.12
32ref|XM_388597.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 46 0.12
33ref|XM_852801.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
34ref|XM_852766.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
35ref|XM_852728.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
36ref|XM_852688.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
37ref|XM_852646.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
38ref|XM_852075.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
39ref|XM_851990.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
40ref|XM_851948.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
41ref|XM_851907.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
42ref|XM_852603.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
43ref|XM_852563.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
44ref|XM_852524.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
45ref|XM_852486.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
46ref|XM_852446.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
47ref|XM_852406.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
48ref|XM_852365.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
49ref|XM_852327.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
50ref|XM_852281.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
51ref|XM_852244.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
52ref|XM_852203.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
53ref|XM_539581.2| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
54ref|XM_852122.1| PREDICTED: Canis familiaris similar to Polyaden... 46 0.12
55ref|NM_003819.2| Homo sapiens poly(A) binding protein, cytoplasm... 46 0.12
56emb|AL845289.3| Human DNA sequence from clone RP11-15J6 on chrom... 46 0.12
57gb|BC029969.1| Homo sapiens poly(A) binding protein, cytoplasmic... 46 0.12
58gb|CP000316.1| Polaromonas sp. JS666, complete genome 46 0.12
59gb|BC094755.1| Homo sapiens poly(A) binding protein, cytoplasmic... 46 0.12
60gb|BC071591.1| Homo sapiens poly(A) binding protein, cytoplasmic... 46 0.12
61gb|U33818.1|HSU33818 Human inducible poly(A)-binding protein mRN... 46 0.12
62gb|U75686.1|HSU75686 Homo sapiens polyadenylate binding protein ... 46 0.12
63gb|AF378546.1|AF378546 Ophiostoma novo-ulmi clone 7 polyadenylat... 44 0.49
64gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.49
65emb|AL772399.9| Mouse DNA sequence from clone RP23-220L1 on chro... 44 0.49
66gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, comple... 44 0.49
67emb|X68015.1|LILIPA L.infantum LiP gene for acidic ribosomal pro... 44 0.49
68gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility lo... 42 1.9
69emb|CR655008.2|CNS0F4DI Tetraodon nigroviridis full-length cDNA 42 1.9
70gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete s... 42 1.9
71emb|AL121712.27|HSJ710H13 Human DNA sequence from clone RP4-710H... 42 1.9
72gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full... 42 1.9
73gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, R... 42 1.9
74gb|AE005711.1| Caulobacter crescentus CB15 section 37 of 359 of ... 42 1.9
75gb|AF397036.1| Mus musculus strain B10.A(2R) heat shock protein ... 42 1.9
76gb|AF397035.1| Mus musculus strain B10.A(1R) heat shock protein ... 42 1.9
77emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.9
78gb|AF087141.1|AF087141 Mus musculus uncharacterized long termina... 42 1.9
79dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.9
80gb|AY968582.1| Expression vector pKLAC1, complete sequence 40 7.7
81ref|XM_530657.1| PREDICTED: Pan troglodytes LOC460786 (LOC460786... 40 7.7
82ref|XM_525792.1| PREDICTED: Pan troglodytes semaphorin W (LOC470... 40 7.7
83ref|XM_513292.1| PREDICTED: Pan troglodytes similar to FLJ25476 ... 40 7.7
84gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.7
85gb|AC130666.9| Mus musculus chromosome 5, clone RP24-79O7, compl... 40 7.7
86gb|AY532061.1| Oikopleura dioica DLLregion-01, integrin alpha 3,... 40 7.7
87gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, com... 40 7.7
88gb|BC015352.1| Homo sapiens dedicator of cytokinesis 5, mRNA (cD... 40 7.7
89ref|XM_883495.1| Leishmania major strain Friedlin huntingtin-int... 40 7.7
90ref|XM_754548.1| Ustilago maydis 521 hypothetical protein (UM034... 40 7.7
91ref|XM_542019.2| PREDICTED: Canis familiaris similar to protein ... 40 7.7
92ref|XM_849643.1| PREDICTED: Canis familiaris similar to breast c... 40 7.7
93emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 7.7
94ref|XM_572711.1| Cryptococcus neoformans var. neoformans JEC21 4... 40 7.7
95ref|XM_572834.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 7.7
96gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 7.7
97gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete s... 40 7.7
98emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chr... 40 7.7
99emb|AL121845.20|HSJ583P15 Human DNA sequence from clone RP4-583P... 40 7.7
100gb|AC136475.7| Homo sapiens chromosome 11, clone RP11-326C3, com... 40 7.7
101emb|Z71255.1|SCCHRXVI S.cerevisiae chromosome XVI 165536 bp sequ... 40 7.7
102emb|Z49919.1|SC9531X S.cerevisiae chromosome XVI cosmid 9531 40 7.7
103emb|Y18817.1|SCO18817 Streptomyces coelicolor A3(2) transcriptio... 40 7.7
104emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 7.7
105emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 7.7
106emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 7.7
107emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 7.7
108emb|AL031024.1|DMC196F3 Drosophila melanogaster cosmid clone 196F3 40 7.7
109emb|AL645844.18| Mouse DNA sequence from clone RP23-82B4 on chro... 40 7.7
110emb|X06997.1|KLLAC12 Kluyveromyces lactis LAC12 gene for lactose... 40 7.7
111gb|AC041005.20| Homo sapiens chromosome 8, clone RP11-69M11, com... 40 7.7
112gb|AC025741.5| Homo sapiens BAC clone RP11-501E14 from 4, comple... 40 7.7
113gb|AF318356.1|AF318356 Homo sapiens pp6997 mRNA, complete cds 40 7.7
114ref|XM_944985.1| PREDICTED: Homo sapiens hypothetical LOC401093 ... 40 7.7
115ref|XM_379228.2| PREDICTED: Homo sapiens hypothetical LOC401093 ... 40 7.7
116ref|NM_021038.3| Homo sapiens muscleblind-like (Drosophila) (MBN... 40 7.7
117ref|NM_207292.1| Homo sapiens muscleblind-like (Drosophila) (MBN... 40 7.7
118gb|AC156609.8| Mus musculus chromosome 15, clone RP23-56E21, com... 40 7.7
119gb|AY319306.2| Bos taurus lactoferrin (Lf) gene, 5' flanking reg... 40 7.7
120dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
121dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
122dbj|AB213024.1| Desulfovibrio vulgaris rrm-1, rpL31, hyp001, prf... 40 7.7
123gb|AC106722.5| Homo sapiens 3 BAC RP11-107G13 (Roswell Park Canc... 40 7.7
124dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.7
125ref|NM_152493.2| Homo sapiens FLJ25476 protein (FLJ25476), mRNA 40 7.7
126dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
127dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
128dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 7.7
129dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
130dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.7
131dbj|AB007888.1| Homo sapiens KIAA0428 mRNA, partial cds 40 7.7
132gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase... 40 7.7
133gb|BC112113.1| Homo sapiens FLJ25476 protein, mRNA (cDNA clone M... 40 7.7
134gb|BC104779.1| Homo sapiens FLJ25476 protein, mRNA (cDNA clone M... 40 7.7
135gb|DQ332700.1| Synthetic construct Saccharomyces cerevisiae clon... 40 7.7
136gb|L16227.1|YSAARDH Candida albicans D-arabinitol dehydrogenase ... 40 7.7
137emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on ch... 40 7.7
138gb|AF015416.1|AF015416 Homo sapiens chromosome 11 from 11p15.5 r... 40 7.7
139gb|U14731.1|SCU14731 Saccharomyces cerevisiae Cdc54p (CDC54) gen... 40 7.7
140emb|AL663073.9| Mouse DNA sequence from clone RP23-197O6 on chro... 40 7.7 
>gb|AY103944.1| Zea mays PCO133356 mRNA sequence
          Length = 2499

 Score =  228 bits (115), Expect = 2e-56
 Identities = 199/227 (87%)
 Strand = Plus / Plus

                                                                       
Query: 340 cagccgctcccgaccacgtcgctctacgtcggcgacctcgaggccaacgtcaccgactcg 399
           ||||| ||||||||||||||||||||||| |||||||| ||||    |||| | ||||||
Sbjct: 302 cagcccctcccgaccacgtcgctctacgtgggcgacctggagggggccgtctcggactcg 361

                                                                       
Query: 400 cagctctacgagctcttcagccaggccggccaggtcgtctcggtccgcgtctgcagggac 459
           ||||| ||||| |||||||||||||| || ||||| || ||||| |||||||||||||| 
Sbjct: 362 cagctgtacgaactcttcagccaggcggggcaggtggtgtcggtgcgcgtctgcagggat 421

                                                                       
Query: 460 gtcaactcgcgccgctccctcggctacgcctacgtcaactacagcaaccccatggatgct 519
           |||| |||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct: 422 gtcacctcgcgccgctcgctcggatacgcctacgtcaactacagcaatcccttggatgct 481

                                                          
Query: 520 gcaagagcaatggaagcgctgaactttgctccactgaacaacaagcc 566
           || |||||| |||||| ||||||||||||| | || |||||||||||
Sbjct: 482 gcgagagcattggaagtgctgaactttgctgctcttaacaacaagcc 528
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>ref|XM_473087.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1980

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Plus

                                                                       
Query: 357 gtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctctt 416
           |||||| ||||| |||||||| |||||    ||||| ||||||||||| |||||||||||
Sbjct: 117 gtcgctgtacgtgggcgacctggaggcgtcggtcacggactcgcagctgtacgagctctt 176

                                                                       
Query: 417 cagccaggccggccaggtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctc 476
           ||||||||| || |||||  | ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 177 cagccaggcggggcaggtgatgtcggtgcgcgtctgcagggacatcagctcgcgccgctc 236

                                                                       
Query: 477 cctcggctacgcctacgtcaactacagcaaccccatggatgctgcaagagcaatggaagc 536
            |||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||   
Sbjct: 237 gctcggctacgcctacgtcaacttcaacaaccccgtggatgctgcaagagcactggagct 296

                                
Query: 537 gctgaactttgctccactgaa 557
           ||| ||||||||||| |||||
Sbjct: 297 gctcaactttgctcctctgaa 317
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>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full
           insert sequence
          Length = 2549

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Plus

                                                                       
Query: 357 gtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctctt 416
           |||||| ||||| |||||||| |||||    ||||| ||||||||||| |||||||||||
Sbjct: 397 gtcgctgtacgtgggcgacctggaggcgtcggtcacggactcgcagctgtacgagctctt 456

                                                                       
Query: 417 cagccaggccggccaggtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctc 476
           ||||||||| || |||||  | ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 457 cagccaggcggggcaggtgatgtcggtgcgcgtctgcagggacatcagctcgcgccgctc 516

                                                                       
Query: 477 cctcggctacgcctacgtcaactacagcaaccccatggatgctgcaagagcaatggaagc 536
            |||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||   
Sbjct: 517 gctcggctacgcctacgtcaacttcaacaaccccgtggatgctgcaagagcactggagct 576

                                
Query: 537 gctgaactttgctccactgaa 557
           ||| ||||||||||| |||||
Sbjct: 577 gctcaactttgctcctctgaa 597
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>dbj|AK064269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E03, full
            insert sequence
          Length = 1496

 Score =  178 bits (90), Expect = 1e-41
 Identities = 150/170 (88%)
 Strand = Plus / Minus

                                                                        
Query: 388  gtcaccgactcgcagctctacgagctcttcagccaggccggccaggtcgtctcggtccgc 447
            ||||| ||||||||||| |||||||||||||||||||| || |||||  | ||||| |||
Sbjct: 1284 gtcacggactcgcagctgtacgagctcttcagccaggcggggcaggtgatgtcggtgcgc 1225

                                                                        
Query: 448  gtctgcagggacgtcaactcgcgccgctccctcggctacgcctacgtcaactacagcaac 507
            |||||||||||| ||| |||||||||||| |||||||||||||||||||||| || ||||
Sbjct: 1224 gtctgcagggacatcagctcgcgccgctcgctcggctacgcctacgtcaacttcaacaac 1165

                                                              
Query: 508  cccatggatgctgcaagagcaatggaagcgctgaactttgctccactgaa 557
            ||| ||||||||||||||||| ||||   ||| ||||||||||| |||||
Sbjct: 1164 cccgtggatgctgcaagagcactggagctgctcaactttgctcctctgaa 1115
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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                         
Query: 357   gtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctctt 416
             |||||| ||||| |||||||| |||||    ||||| ||||||||||| |||||||||||
Sbjct: 57724 gtcgctgtacgtgggcgacctggaggcgtcggtcacggactcgcagctgtacgagctctt 57665

                                                                         
Query: 417   cagccaggccggccaggtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctc 476
             ||||||||| || |||||  | ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 57664 cagccaggcggggcaggtgatgtcggtgcgcgtctgcagggacatcagctcgcgccgctc 57605

                                                      
Query: 477   cctcggctacgcctacgtcaactacagcaaccccatggatg 517
              |||||||||||||||||||||| || ||||||| ||||||
Sbjct: 57604 gctcggctacgcctacgtcaacttcaacaaccccgtggatg 57564
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                            
Query: 357      gtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctctt 416
                |||||| ||||| |||||||| |||||    ||||| ||||||||||| |||||||||||
Sbjct: 25176057 gtcgctgtacgtgggcgacctggaggcgtcggtcacggactcgcagctgtacgagctctt 25175998

                                                                            
Query: 417      cagccaggccggccaggtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctc 476
                ||||||||| || |||||  | ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 25175997 cagccaggcggggcaggtgatgtcggtgcgcgtctgcagggacatcagctcgcgccgctc 25175938

                                                         
Query: 477      cctcggctacgcctacgtcaactacagcaaccccatggatg 517
                 |||||||||||||||||||||| || ||||||| ||||||
Sbjct: 25175937 gctcggctacgcctacgtcaacttcaacaaccccgtggatg 25175897
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score =  153 bits (77), Expect = 7e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                          
Query: 357    gtcgctctacgtcggcgacctcgaggccaacgtcaccgactcgcagctctacgagctctt 416
              |||||| ||||| |||||||| |||||    ||||| ||||||||||| |||||||||||
Sbjct: 123484 gtcgctgtacgtgggcgacctggaggcgtcggtcacggactcgcagctgtacgagctctt 123425

                                                                          
Query: 417    cagccaggccggccaggtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctc 476
              ||||||||| || |||||  | ||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 123424 cagccaggcggggcaggtgatgtcggtgcgcgtctgcagggacatcagctcgcgccgctc 123365

                                                       
Query: 477    cctcggctacgcctacgtcaactacagcaaccccatggatg 517
               |||||||||||||||||||||| || ||||||| ||||||
Sbjct: 123364 gctcggctacgcctacgtcaacttcaacaaccccgtggatg 123324
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>ref|XM_450039.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2314

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
           |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 323 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 382

                                              
Query: 493 gtcaactacagcaaccccatggatgctgcaagagc 527
           ||||||||||||| ||||   ||||||||| ||||
Sbjct: 383 gtcaactacagcagccccgccgatgctgcacgagc 417
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>ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.15
           mRNA
          Length = 2410

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
           |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 330 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 389

                                              
Query: 493 gtcaactacagcaaccccatggatgctgcaagagc 527
           ||||||||||||| ||||   ||||||||| ||||
Sbjct: 390 gtcaactacagcagccccgccgatgctgcacgagc 424
to top
>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full
           insert sequence
          Length = 2410

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
           |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 330 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 389

                                              
Query: 493 gtcaactacagcaaccccatggatgctgcaagagc 527
           ||||||||||||| ||||   ||||||||| ||||
Sbjct: 390 gtcaactacagcagccccgccgatgctgcacgagc 424
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>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full
           insert sequence
          Length = 2314

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
           |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 323 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 382

                                              
Query: 493 gtcaactacagcaaccccatggatgctgcaagagc 527
           ||||||||||||| ||||   ||||||||| ||||
Sbjct: 383 gtcaactacagcagccccgccgatgctgcacgagc 417
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                           
Query: 433     gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
               |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 1164389 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 1164330

                                 
Query: 493     gtcaactacagcaacccc 510
               ||||||||||||| ||||
Sbjct: 1164329 gtcaactacagcagcccc 1164312
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>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1310_F05
          Length = 107916

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                         
Query: 433   gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
             |||||||| || ||||||||||||||||||||| ||||  | || |||||||||||||||
Sbjct: 52983 gtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggctacgcctac 52924

                               
Query: 493   gtcaactacagcaacccc 510
             ||||||||||||| ||||
Sbjct: 52923 gtcaactacagcagcccc 52906
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>gb|AY103559.1| Zea mays PCO112591 mRNA sequence
          Length = 1361

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 400 cagctctacgagctcttcagccaggccggccaggtcgtctcggtccgcgtctgcagggac 459
           ||||||| |||  |||||||||||| ||||   |||||||| || ||||||||||| |||
Sbjct: 233 cagctcttcgacgtcttcagccaggtcggcggcgtcgtctccgtgcgcgtctgcagagac 174

                                                           
Query: 460 gtcaactcgcgccgctccctcggctacgcctacgtcaactacagcaac 507
            ||||||| |||   || ||||||||||||||||||||||||| ||||
Sbjct: 173 atcaactcccgcaagtcgctcggctacgcctacgtcaactacaacaac 126
to top
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete
           cds
          Length = 2237

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 gtcgtctcggtccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctac 492
           |||||||| || ||||||||||||||||||| ||||||    || ||||| |||||||||
Sbjct: 235 gtcgtctccgtgcgcgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctac 294

                     
Query: 493 gtcaactaca 502
           ||||||||||
Sbjct: 295 gtcaactaca 304
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>ref|NM_001031597.1| Gallus gallus poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA
          Length = 2853

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 443 tccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctacgtcaact 499
           ||||||||||||||||| | | | | || ||||| ||||||||||||||||||||||
Sbjct: 595 tccgcgtctgcagggacatgatcacccggcgctctctcggctacgcctacgtcaact 651
to top
>emb|AJ719881.1| Gallus gallus mRNA for hypothetical protein, clone 7l20
          Length = 2853

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 443 tccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctacgtcaact 499
           ||||||||||||||||| | | | | || ||||| ||||||||||||||||||||||
Sbjct: 595 tccgcgtctgcagggacatgatcacccggcgctctctcggctacgcctacgtcaact 651
to top
>emb|CR390628.1| Gallus gallus finished cDNA, clone ChEST353d21
          Length = 581

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 443 tccgcgtctgcagggacgtcaactcgcgccgctccctcggctacgcctacgtcaact 499
           ||||||||||||||||| | | | | || ||||| ||||||||||||||||||||||
Sbjct: 140 tccgcgtctgcagggacatgatcacccggcgctctctcggctacgcctacgtcaact 196
to top
>gb|AF043297.1|AF043297 Chlamydomonas reinhardtii poly(A) binding protein RB47 (PABP) mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 2846

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 467 cgcgccgctccctcggctacgcctacgtcaactaca 502
           |||||||||| || ||||||||||||||||||||||
Sbjct: 375 cgcgccgctcgctgggctacgcctacgtcaactaca 410
to top
>ref|XM_324155.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial
           mRNA
          Length = 2295

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 472 cgctccctcggctacgcctacgtcaactaca 502
           |||||||||||||| ||||||||||||||||
Sbjct: 295 cgctccctcggctatgcctacgtcaactaca 325
to top
>ref|XM_955332.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial
           mRNA
          Length = 2295

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 472 cgctccctcggctacgcctacgtcaactaca 502
           |||||||||||||| ||||||||||||||||
Sbjct: 295 cgctccctcggctatgcctacgtcaactaca 325
to top
>ref|XM_564448.1| Anopheles gambiae str. PEST ENSANGP00000026584
           (ENSANGG00000019791), partial mRNA
          Length = 1848

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           |||||||||||||||||||| ||||||||||
Sbjct: 145 cgccgctccctcggctacgcgtacgtcaact 175
to top
>ref|XM_309558.2| Anopheles gambiae str. PEST ENSANGP00000022280
           (ENSANGG00000019791), partial mRNA
          Length = 1899

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           |||||||||||||||||||| ||||||||||
Sbjct: 118 cgccgctccctcggctacgcgtacgtcaact 148
to top
>ref|XM_364660.1| Magnaporthe grisea 70-15 hypothetical protein (MG09505.4) partial
           mRNA
          Length = 2289

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 469 cgccgctccctcggctacgcctacgtcaactaca 502
           |||||||| ||||||||||||||||| |||||||
Sbjct: 295 cgccgctctctcggctacgcctacgtgaactaca 328
to top
>ref|XM_417821.1| PREDICTED: Gallus gallus similar to PABPC4 protein (LOC419674), mRNA
          Length = 3444

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 475  tccctcggctacgcctacgtcaact 499
            |||||||||||||||||||||||||
Sbjct: 1273 tccctcggctacgcctacgtcaact 1297
to top
>emb|BX935872.1| Gallus gallus finished cDNA, clone ChEST164f17
          Length = 1110

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 475 tccctcggctacgcctacgtcaact 499
           |||||||||||||||||||||||||
Sbjct: 193 tccctcggctacgcctacgtcaact 217
to top
>emb|BX933440.1| Gallus gallus finished cDNA, clone ChEST667m11
          Length = 1243

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 475 tccctcggctacgcctacgtcaact 499
           |||||||||||||||||||||||||
Sbjct: 225 tccctcggctacgcctacgtcaact 249
to top
>gb|AF032896.1|AF032896 Petromyzon marinus polyadenylate binding protein (PABP) mRNA,
           complete cds
          Length = 2508

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 467 cgcgccgctccctcggctacgcctacgtcaact 499
           |||||||||| ||||| ||||||||||||||||
Sbjct: 413 cgcgccgctcgctcggttacgcctacgtcaact 445
to top
>gb|AY616044.1| Prototheca wickerhamii plastid poly(A) binding protein RB47-like
           protein mRNA, partial cds; nuclear gene for plastid
           product
          Length = 345

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 475 tccctcggctacgcctacgtcaactaca 502
           ||||| ||||||||||||||||||||||
Sbjct: 100 tccctgggctacgcctacgtcaactaca 127
to top
>ref|XM_513344.1| PREDICTED: Pan troglodytes similar to PABPC4 protein (LOC456782),
           mRNA
          Length = 2030

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 145 cgccgctccctgggctatgcctacgtcaact 175
to top
>gb|BC065540.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible
           form), mRNA (cDNA clone MGC:70755 IMAGE:6061561),
           complete cds
          Length = 3030

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 946 cgccgctccctgggctatgcctacgtcaact 976
to top
>ref|XM_388597.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08421.1)
           partial mRNA
          Length = 2355

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 472 cgctccctcggctacgcctacgtcaactaca 502
           ||||| |||||||| ||||||||||||||||
Sbjct: 292 cgctctctcggctatgcctacgtcaactaca 322
to top
>ref|XM_852801.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 23 (LOC482464), mRNA
          Length = 2608

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852766.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 22 (LOC482464), mRNA
          Length = 2611

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852728.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 21 (LOC482464), mRNA
          Length = 2551

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852688.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 20 (LOC482464), mRNA
          Length = 2563

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852646.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 19 (LOC482464), mRNA
          Length = 2437

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852075.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 6 (LOC482464), mRNA
          Length = 2599

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_851990.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 4 (LOC482464), mRNA
          Length = 1909

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_851948.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 3 (LOC482464), mRNA
          Length = 2027

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 145 cgccgctccctgggctatgcctacgtcaact 175
to top
>ref|XM_851907.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 2 (LOC482464), mRNA
          Length = 2638

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852603.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 18 (LOC482464), mRNA
          Length = 2524

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852563.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 17 (LOC482464), mRNA
          Length = 2605

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852524.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 16 (LOC482464), mRNA
          Length = 2599

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852486.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 15 (LOC482464), mRNA
          Length = 2614

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852446.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 14 (LOC482464), mRNA
          Length = 2584

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852406.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 13 (LOC482464), mRNA
          Length = 2344

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852365.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 12 (LOC482464), mRNA
          Length = 2605

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852327.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 11 (LOC482464), mRNA
          Length = 2662

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852281.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 10 (LOC482464), mRNA
          Length = 2644

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852244.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 9 (LOC482464), mRNA
          Length = 2595

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852203.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 8 (LOC482464), mRNA
          Length = 2644

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_539581.2| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 1 (LOC482464), mRNA
          Length = 2686

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|XM_852122.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 7 (LOC482464), mRNA
          Length = 2273

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 530 cgccgctccctgggctatgcctacgtcaact 560
to top
>ref|NM_003819.2| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible
           form) (PABPC4), mRNA
          Length = 3065

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 939 cgccgctccctgggctatgcctacgtcaact 969
to top
>emb|AL845289.3| Human DNA sequence from clone RP11-15J6 on chromosome 1 Contains the
            5' end of the PABPC4 gene for cytoplasmic 4 (inducible
            form) poly(A) binding protein, part of a  novel gene and
            a CpG island, complete sequence
          Length = 16269

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 469  cgccgctccctcggctacgcctacgtcaact 499
            ||||||||||| ||||| |||||||||||||
Sbjct: 4601 cgccgctccctgggctatgcctacgtcaact 4571
to top
>gb|BC029969.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible
           form), mRNA (cDNA clone IMAGE:3461313)
          Length = 2782

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 595 cgccgctccctgggctatgcctacgtcaact 625
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 298     gtgcccgtgcccgtgcccgcgcacgcg 324
               |||||||||||||||||||||| ||||
Sbjct: 2460421 gtgcccgtgcccgtgcccgcgcccgcg 2460395
to top
>gb|BC094755.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form),
            mRNA (cDNA clone MGC:104624 IMAGE:30331896), complete cds
          Length = 3152

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 469  cgccgctccctcggctacgcctacgtcaact 499
            ||||||||||| ||||| |||||||||||||
Sbjct: 984  cgccgctccctgggctatgcctacgtcaact 1014
to top
>gb|BC071591.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form),
            mRNA (cDNA clone MGC:87368 IMAGE:5265829), complete cds
          Length = 3150

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 469  cgccgctccctcggctacgcctacgtcaact 499
            ||||||||||| ||||| |||||||||||||
Sbjct: 981  cgccgctccctgggctatgcctacgtcaact 1011
to top
>gb|U33818.1|HSU33818 Human inducible poly(A)-binding protein mRNA, complete cds
          Length = 2394

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 298 cgccgctccctgggctatgcctacgtcaact 328
to top
>gb|U75686.1|HSU75686 Homo sapiens polyadenylate binding protein mRNA, complete cds
          Length = 3118

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 469 cgccgctccctcggctacgcctacgtcaact 499
           ||||||||||| ||||| |||||||||||||
Sbjct: 939 cgccgctccctgggctatgcctacgtcaact 969
to top
>gb|AF378546.1|AF378546 Ophiostoma novo-ulmi clone 7 polyadenylate binding protein-like
           protein mRNA, partial cds
          Length = 381

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 ggctacgcctacgtcaactaca 502
           ||||||||||||||||||||||
Sbjct: 327 ggctacgcctacgtcaactaca 348
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 298    gtgcccgtgcccgtgcccgcgc 319
              ||||||||||||||||||||||
Sbjct: 782101 gtgcccgtgcccgtgcccgcgc 782122
to top
>emb|AL772399.9| Mouse DNA sequence from clone RP23-220L1 on chromosome 4, complete
             sequence
          Length = 103488

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 299   tgcccgtgcccgtgcccgcgcacgcg 324
             ||||||||||||||||||||| ||||
Sbjct: 30221 tgcccgtgcccgtgcccgcgcccgcg 30196
to top
>gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, complete sequence
          Length = 173472

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 34    ggcccctcccctcctcgctcct 55
             ||||||||||||||||||||||
Sbjct: 41510 ggcccctcccctcctcgctcct 41489
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>emb|X68015.1|LILIPA L.infantum LiP gene for acidic ribosomal protein LiP
          Length = 2850

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 36  cccctcccctcctcgctcctcc 57
           ||||||||||||||||||||||
Sbjct: 489 cccctcccctcctcgctcctcc 510
to top
>gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility locus class III regions Hsc70t
             gene, partial cds; smRNP, G7A, NG23, MutS homolog, CLCP,
             NG24, NG25, and NG26 genes, complete cds; and unknown
             genes
          Length = 135545

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 499   tacagcaaccccatggatgctgcaa 523
             ||||| |||||||||||||||||||
Sbjct: 33423 tacagtaaccccatggatgctgcaa 33447
to top
>emb|CR655008.2|CNS0F4DI Tetraodon nigroviridis full-length cDNA
          Length = 1126

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 469 cgccgctccctcggctacgcctacgtcaa 497
           ||||| ||||||||||| |||||||||||
Sbjct: 745 cgccgatccctcggctatgcctacgtcaa 773
to top
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
          Length = 93173

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  tgtgcccgtgcccgtgcccgc 317
            |||||||||||||||||||||
Sbjct: 4820 tgtgcccgtgcccgtgcccgc 4800
to top
>emb|AL121712.27|HSJ710H13 Human DNA sequence from clone RP4-710H13 on chromosome 20 Contains the
             SNAI1 gene encoding the snail 1 (drosophila homolog) zinc
             finger protein, a putative novel gene, two CpG islands,
             ESTs, STSs and GSSs, complete sequence
          Length = 79779

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    cccctcccctcctcgctcctc 56
             |||||||||||||||||||||
Sbjct: 49517 cccctcccctcctcgctcctc 49497
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>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA
           sequence
          Length = 2056

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 475 tccctcggctacgcctacgtcaactacagcaaccccatggatgctgcaagagcaatggaa 534
           ||||| || ||||| |||||||||| ||||| |||    ||||||||||| ||| |||||
Sbjct: 146 tccctaggttacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaa 205

                            
Query: 535 gcgctgaactttgctcc 551
             |||||||||| ||||
Sbjct: 206 atgctgaactttactcc 222
to top
>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete
              Sequence, complete sequence
          Length = 221899

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 499    tacagcaaccccatggatgctgcaa 523
              ||||| |||||||||||||||||||
Sbjct: 119293 tacagtaaccccatggatgctgcaa 119317
to top
>gb|AE005711.1| Caulobacter crescentus CB15 section 37 of 359 of the complete genome
          Length = 10738

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 127  ccaccgcgaggccccggcggg 147
            |||||||||||||||||||||
Sbjct: 5145 ccaccgcgaggccccggcggg 5125
to top
>gb|AF397036.1| Mus musculus strain B10.A(2R) heat shock protein Hsc70t (Hsc70t) gene,
             partial cds; and small ribonuclear protein G7b (G7b) gene,
             viral envelope protein G7e (G7e) gene,
             valyl-tRNA-synthetase G7a/Bat6 (G7a) gene, G7c (G7c) gene,
             G7d (G7d) gene, and DNA mismatch repair protein Msh5
             (Msh5) gene, complete cds
          Length = 72790

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 499   tacagcaaccccatggatgctgcaa 523
             ||||| |||||||||||||||||||
Sbjct: 33152 tacagtaaccccatggatgctgcaa 33176
to top
>gb|AF397035.1| Mus musculus strain B10.A(1R) heat shock protein Hsc70t (Hsc70t) gene,
             partial cds; and small ribonuclear protein G7b (G7b) gene,
             viral envelope protein G7e (G7e) gene,
             valyl-tRNA-synthetase G7a/Bat6 (G7a) gene, G7c (G7c) gene,
             G7d (G7d) gene, and DNA mismatch repair protein Msh5
             (Msh5) gene, complete cds
          Length = 78679

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 499   tacagcaaccccatggatgctgcaa 523
             ||||| |||||||||||||||||||
Sbjct: 32614 tacagtaaccccatggatgctgcaa 32638
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 300     gcccgtgcccgtgcccgcgca 320
               |||||||||||||||||||||
Sbjct: 4725027 gcccgtgcccgtgcccgcgca 4725047
to top
>gb|AF087141.1|AF087141 Mus musculus uncharacterized long terminal repeat, complete sequence;
             and valyl-tRNA synthetase (G7a) gene, complete cds
          Length = 16041

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 499   tacagcaaccccatggatgctgcaa 523
             ||||| |||||||||||||||||||
Sbjct: 10420 tacagtaaccccatggatgctgcaa 10444
to top
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170,
             complete sequence
          Length = 101172

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   ttgtgcccgtgcccgtgcccg 316
             |||||||||||||||||||||
Sbjct: 74916 ttgtgcccgtgcccgtgcccg 74936
to top
>gb|AY968582.1| Expression vector pKLAC1, complete sequence
          Length = 9091

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  tgtgcccgtgcccgtgcccg 316
            ||||||||||||||||||||
Sbjct: 4559 tgtgcccgtgcccgtgcccg 4540
to top
>ref|XM_530657.1| PREDICTED: Pan troglodytes LOC460786 (LOC460786), mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 411 gggaggggccgcgcagcagc 392
to top
>ref|XM_525792.1| PREDICTED: Pan troglodytes semaphorin W (LOC470411), mRNA
          Length = 2355

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 cgggaggggccgcgcagcag 342
           ||||||||||||||||||||
Sbjct: 30  cgggaggggccgcgcagcag 11
to top
>ref|XM_513292.1| PREDICTED: Pan troglodytes similar to FLJ25476 protein (LOC456727),
           mRNA
          Length = 1121

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cccgtgcccgtgcccgcgcacgcg 324
           ||||||||||||||||||| ||||
Sbjct: 473 cccgtgcccgtgcccgcgcccgcg 450
to top
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 478    ctcggctacgcctacgtcaactac 501
              ||||| ||||||||||||||||||
Sbjct: 286083 ctcggttacgcctacgtcaactac 286106



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 372    cgacctcgaggccaacgtcaccga 395
              ||||||||||||||||||| ||||
Sbjct: 278113 cgacctcgaggccaacgtccccga 278090
to top
>gb|AC130666.9| Mus musculus chromosome 5, clone RP24-79O7, complete sequence
          Length = 172995

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    tgtgcccgtgcccgtgcccg 316
              ||||||||||||||||||||
Sbjct: 159908 tgtgcccgtgcccgtgcccg 159889
to top
>gb|AY532061.1| Oikopleura dioica DLLregion-01, integrin alpha 3, DLLregion-03,
             distal-less, DNA repair protein RAD51, DLLregion-07,
             peptidyl-prolyl cis-trans isomerase, DLLregion-09,
             DLLregion-10, Ras-related protein RAP1, calcium
             transporter 2, polyadenylate binding protein, and
             DLLregion-14 genes, complete cds
          Length = 52924

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 472   cgctccctcggctacgcctacgtcaact 499
             ||||| ||||| ||||||||||||||||
Sbjct: 49912 cgctcgctcggttacgcctacgtcaact 49885
to top
>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tgtgcccgtgcccgtgcccg 316
              ||||||||||||||||||||
Sbjct: 135357 tgtgcccgtgcccgtgcccg 135376
to top
>gb|BC015352.1| Homo sapiens dedicator of cytokinesis 5, mRNA (cDNA clone
           IMAGE:4429918), with apparent retained intron
          Length = 798

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 gcccgtgcccgtgcccgcgc 319
           ||||||||||||||||||||
Sbjct: 27  gcccgtgcccgtgcccgcgc 8
to top
>ref|XM_883495.1| Leishmania major strain Friedlin huntingtin-interacting protein
           (HIP) partial mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 470 gccgctccctcggctacgcctacg 493
           |||||||||||||| |||||||||
Sbjct: 761 gccgctccctcggcaacgcctacg 784
to top
>ref|XM_754548.1| Ustilago maydis 521 hypothetical protein (UM03494.1) partial mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 472 cgctccctcggctacgcctacgtcaact 499
           ||||| ||||||||||| ||||||||||
Sbjct: 256 cgctcgctcggctacgcttacgtcaact 283
to top
>ref|XM_542019.2| PREDICTED: Canis familiaris similar to protein kinase N1 isoform 2
           (LOC484903), mRNA
          Length = 3231

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 322 gcgggaggggccgcgcagcagccgctcc 349
           |||||||| ||||||||||||| |||||
Sbjct: 642 gcgggaggagccgcgcagcagcagctcc 615
to top
>ref|XM_849643.1| PREDICTED: Canis familiaris similar to breast cancer metastasis
           suppressor 1 isoform 1 (LOC611920), mRNA
          Length = 1340

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 ccgctccgctcctcctcgct 169
           ||||||||||||||||||||
Sbjct: 170 ccgctccgctcctcctcgct 151
to top
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 470    gccgctccctcggctacgcctacg 493
              |||||||||||||| |||||||||
Sbjct: 212113 gccgctccctcggcaacgcctacg 212090
to top
>ref|XM_572711.1| Cryptococcus neoformans var. neoformans JEC21 40S ribosomal protein
           S7 (CNI01120) partial mRNA
          Length = 778

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 372 cgacctcgaggccaacgtcaccga 395
           ||||||||||||||||||| ||||
Sbjct: 95  cgacctcgaggccaacgtccccga 118
to top
>ref|XM_572834.1| Cryptococcus neoformans var. neoformans JEC21 polyadenylate-binding
           protein (CNI01160) partial mRNA
          Length = 2329

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 478 ctcggctacgcctacgtcaactac 501
           ||||| ||||||||||||||||||
Sbjct: 380 ctcggttacgcctacgtcaactac 403
to top
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    aaaaatcgaaaaaggaggaggaac 248
              |||||||||||||||| |||||||
Sbjct: 927175 aaaaatcgaaaaaggaagaggaac 927152
to top
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
          Length = 116810

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   tgtgcccgtgcccgtgcccg 316
             ||||||||||||||||||||
Sbjct: 94970 tgtgcccgtgcccgtgcccg 94951
to top
>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the
             gene for a novel protein (FLJ35476), the gene for a novel
             protein similar to ABO family protein, two novel genes,
             the PHC2 gene for polyhomeotic-like 2 (Drosophila) and two
             CpG islands, complete sequence
          Length = 188665

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   cccgtgcccgtgcccgcgcacgcg 324
             ||||||||||||||||||| ||||
Sbjct: 78026 cccgtgcccgtgcccgcgcccgcg 78003
to top
>emb|AL121845.20|HSJ583P15 Human DNA sequence from clone RP4-583P15 on chromosome 20 Contains the
             3' end of the TNFRSF6B gene for member 6 (decoy) of tumor
             necrosis factor receptor, the ARFRP1 gene for
             ADP-ribosylation factor related protein 1, the gene for a
             novel protein (KIAA1847, FLJ14972), the gene for a novel
             protein (FLJ20406), the SLC2A4RG gene for SLC2A4 regulator
             (GEF),  the 3' end of the BTBD4 gene for BTB (POZ) domain
             containing 4, a novel gene and ten CpG islands, complete
             sequence
          Length = 120917

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   gtgcccgtgcccgtgcccgc 317
             ||||||||||||||||||||
Sbjct: 12071 gtgcccgtgcccgtgcccgc 12090
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>gb|AC136475.7| Homo sapiens chromosome 11, clone RP11-326C3, complete sequence
          Length = 143779

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    cctcccctcctcgctcctcc 57
             ||||||||||||||||||||
Sbjct: 52102 cctcccctcctcgctcctcc 52083
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>emb|Z71255.1|SCCHRXVI S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards
          Length = 165536

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 220   ggaggaaaaatcgaaaaaggaggaggaa 247
             |||||||| || ||||||||||||||||
Sbjct: 64716 ggaggaaagattgaaaaaggaggaggaa 64743
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>emb|Z49919.1|SC9531X S.cerevisiae chromosome XVI cosmid 9531
          Length = 27166

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 220   ggaggaaaaatcgaaaaaggaggaggaa 247
             |||||||| || ||||||||||||||||
Sbjct: 21718 ggaggaaagattgaaaaaggaggaggaa 21745
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>emb|Y18817.1|SCO18817 Streptomyces coelicolor A3(2) transcriptional regulator and
            actinorhodin biosynthetic genes, strain J1501
          Length = 4851

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  tgcccgtgcccgtgcccgcg 318
            ||||||||||||||||||||
Sbjct: 4159 tgcccgtgcccgtgcccgcg 4178
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     tgtgcccgtgcccgtgcccg 316
               ||||||||||||||||||||
Sbjct: 1308806 tgtgcccgtgcccgtgcccg 1308787
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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tgtgcccgtgcccgtgcccg 316
              ||||||||||||||||||||
Sbjct: 529064 tgtgcccgtgcccgtgcccg 529083
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    tgcccgtgcccgtgcccgcg 318
              ||||||||||||||||||||
Sbjct: 169237 tgcccgtgcccgtgcccgcg 169256
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 363    ctacgtcggcgacctcgaggccaacgtcaccg 394
              |||||||||| || || |||||||||||||||
Sbjct: 173964 ctacgtcggcaacgtcaaggccaacgtcaccg 173995
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>emb|AL031024.1|DMC196F3 Drosophila melanogaster cosmid clone 196F3
          Length = 35835

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tgtgcccgtgcccgtgcccg 316
             ||||||||||||||||||||
Sbjct: 26022 tgtgcccgtgcccgtgcccg 26041
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>emb|AL645844.18| Mouse DNA sequence from clone RP23-82B4 on chromosome 11 Contains a heat
              shock protein Hsp90 family pseudogene, complete sequence
          Length = 146832

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     tcccctcctcgctcctcctg 59
              ||||||||||||||||||||
Sbjct: 142677 tcccctcctcgctcctcctg 142658
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>emb|X06997.1|KLLAC12 Kluyveromyces lactis LAC12 gene for lactose permease
          Length = 7127

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 tgtgcccgtgcccgtgcccg 316
           ||||||||||||||||||||
Sbjct: 500 tgtgcccgtgcccgtgcccg 519
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>gb|AC041005.20| Homo sapiens chromosome 8, clone RP11-69M11, complete sequence
          Length = 87471

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   gcccgtgcccgtgcccgcgc 319
             ||||||||||||||||||||
Sbjct: 25950 gcccgtgcccgtgcccgcgc 25931
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>gb|AC025741.5| Homo sapiens BAC clone RP11-501E14 from 4, complete sequence
          Length = 190221

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    gaggggaggagataagggtt 202
              ||||||||||||||||||||
Sbjct: 126470 gaggggaggagataagggtt 126489
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>gb|AF318356.1|AF318356 Homo sapiens pp6997 mRNA, complete cds
          Length = 3008

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cccgtgcccgtgcccgcgcacgcg 324
           ||||||||||||||||||| ||||
Sbjct: 442 cccgtgcccgtgcccgcgcccgcg 419
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>ref|XM_944985.1| PREDICTED: Homo sapiens hypothetical LOC401093 (LOC401093), mRNA
          Length = 3506

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 224 gggaggggccgcgcagcagc 205
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>ref|XM_379228.2| PREDICTED: Homo sapiens hypothetical LOC401093 (LOC401093), mRNA
          Length = 3506

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 224 gggaggggccgcgcagcagc 205
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>ref|NM_021038.3| Homo sapiens muscleblind-like (Drosophila) (MBNL1), transcript
           variant 1, mRNA
          Length = 6404

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 822 gggaggggccgcgcagcagc 841
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>ref|NM_207292.1| Homo sapiens muscleblind-like (Drosophila) (MBNL1), transcript
           variant 2, mRNA
          Length = 6368

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 822 gggaggggccgcgcagcagc 841
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>gb|AC156609.8| Mus musculus chromosome 15, clone RP23-56E21, complete sequence
          Length = 118659

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tgtgcccgtgcccgtgcccg 316
             ||||||||||||||||||||
Sbjct: 84169 tgtgcccgtgcccgtgcccg 84188
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>gb|AY319306.2| Bos taurus lactoferrin (Lf) gene, 5' flanking region exons 1, 2 and
            partial cds
          Length = 8212

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  ggcgggatccgctccgctcc 161
            ||||||||||||||||||||
Sbjct: 4656 ggcgggatccgctccgctcc 4637
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      ccctcccctcctcgctcctc 56
               ||||||||||||||||||||
Sbjct: 9399501 ccctcccctcctcgctcctc 9399482
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      ccctcccctcctcgctcctc 56
               ||||||||||||||||||||
Sbjct: 9691450 ccctcccctcctcgctcctc 9691431



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 360     gctctacgtcggcgacctcg 379
               ||||||||||||||||||||
Sbjct: 9180539 gctctacgtcggcgacctcg 9180520
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>dbj|AB213024.1| Desulfovibrio vulgaris rrm-1, rpL31, hyp001, prfA, hemk genes for
            rRNA methylase, ribosomal protein L31, hypothetical
            protein, peptide release factor 1, HemK protein, complete
            cds
          Length = 5528

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 214  ctccggggaggaaaaatcga 233
            ||||||||||||||||||||
Sbjct: 1769 ctccggggaggaaaaatcga 1750
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>gb|AC106722.5| Homo sapiens 3 BAC RP11-107G13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126781

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   gggaggggccgcgcagcagc 343
             ||||||||||||||||||||
Sbjct: 91856 gggaggggccgcgcagcagc 91875
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    cggcgacctcgaggccaacg 388
              ||||||||||||||||||||
Sbjct: 105226 cggcgacctcgaggccaacg 105245
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>ref|NM_152493.2| Homo sapiens FLJ25476 protein (FLJ25476), mRNA
          Length = 3158

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cccgtgcccgtgcccgcgcacgcg 324
           ||||||||||||||||||| ||||
Sbjct: 592 cccgtgcccgtgcccgcgcccgcg 569
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   gctctacgtcggcgacctcg 379
             ||||||||||||||||||||
Sbjct: 80921 gctctacgtcggcgacctcg 80902
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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     ccctcccctcctcgctcctc 56
              ||||||||||||||||||||
Sbjct: 129453 ccctcccctcctcgctcctc 129434
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gagaggggaggagataaggg 200
              ||||||||||||||||||||
Sbjct: 343032 gagaggggaggagataaggg 343051
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>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0004F07
          Length = 135890

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccctcccctcctcgctcctc 56
             ||||||||||||||||||||
Sbjct: 70369 ccctcccctcctcgctcctc 70350
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    aaggaggaggaaccgcgatggcag 259
              |||||||||||| |||||||||||
Sbjct: 490640 aaggaggaggaatcgcgatggcag 490663
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>dbj|AB007888.1| Homo sapiens KIAA0428 mRNA, partial cds
          Length = 5940

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 gggaggggccgcgcagcagc 343
           ||||||||||||||||||||
Sbjct: 394 gggaggggccgcgcagcagc 413
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>gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase-like protein NHL, M68, and
             ADP-ribosylation factor related protein 1 (ARFRP1) genes,
             complete cds
          Length = 114793

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   gtgcccgtgcccgtgcccgc 317
             ||||||||||||||||||||
Sbjct: 97534 gtgcccgtgcccgtgcccgc 97553
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>gb|BC112113.1| Homo sapiens FLJ25476 protein, mRNA (cDNA clone MGC:138318
           IMAGE:8327581), complete cds
          Length = 2021

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cccgtgcccgtgcccgcgcacgcg 324
           ||||||||||||||||||| ||||
Sbjct: 514 cccgtgcccgtgcccgcgcccgcg 491
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>gb|BC104779.1| Homo sapiens FLJ25476 protein, mRNA (cDNA clone MGC:132439
           IMAGE:8143782), complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cccgtgcccgtgcccgcgcacgcg 324
           ||||||||||||||||||| ||||
Sbjct: 514 cccgtgcccgtgcccgcgcccgcg 491
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>gb|DQ332700.1| Synthetic construct Saccharomyces cerevisiae clone FLH201017.01X
           RLF2 gene, complete sequence
          Length = 1821

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 220 ggaggaaaaatcgaaaaaggaggaggaa 247
           |||||||| || ||||||||||||||||
Sbjct: 618 ggaggaaagattgaaaaaggaggaggaa 645
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>gb|L16227.1|YSAARDH Candida albicans D-arabinitol dehydrogenase (ArDH) gene, complete
           cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 ggggaggaaaaatcgaaaaa 237
           ||||||||||||||||||||
Sbjct: 401 ggggaggaaaaatcgaaaaa 382
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>emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on chromosome 2, complete
             sequence
          Length = 199019

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   tgtgcccgtgcccgtgcccg 316
             ||||||||||||||||||||
Sbjct: 31804 tgtgcccgtgcccgtgcccg 31785
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>gb|AF015416.1|AF015416 Homo sapiens chromosome 11 from 11p15.5 region, complete sequence
          Length = 95038

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    cctcccctcctcgctcctcc 57
             ||||||||||||||||||||
Sbjct: 52050 cctcccctcctcgctcctcc 52031
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>gb|U14731.1|SCU14731 Saccharomyces cerevisiae Cdc54p (CDC54) gene, complete cds
          Length = 5392

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 220 ggaggaaaaatcgaaaaaggaggaggaa 247
           |||||||| || ||||||||||||||||
Sbjct: 264 ggaggaaagattgaaaaaggaggaggaa 291
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>emb|AL663073.9| Mouse DNA sequence from clone RP23-197O6 on chromosome X, complete
             sequence
          Length = 192304

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   gagaggggaggagataaggg 200
             ||||||||||||||||||||
Sbjct: 90560 gagaggggaggagataaggg 90541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,179,101
Number of Sequences: 3902068
Number of extensions: 3179101
Number of successful extensions: 78786
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 77809
Number of HSP's gapped (non-prelim): 973
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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