>RNPH_STRAW (Q82D17) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 244

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 163 WMDGRTPERASEP*LAGAVRCVSVGVEGGVACVRAC 56
           W  GR   +A    L G V  VSVG+ GGV  +  C
Sbjct: 144 WAQGRKLVKAGRKPLTGTVSAVSVGIVGGVPLLDLC 179

>NOS3_BOVIN (P29473) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 9   ANPSPAPSLRLGPIRTHARTHATPPSTPTDT 101
           A+P+P PS    P   HA  H+  P++PT T
Sbjct: 31  ASPAPEPSRAPAPATPHAPDHSPAPNSPTLT 61

>SETBP_HUMAN (Q9Y6X0) SET-binding protein (SEB)|
          Length = 1542

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 5    AGQPLSR-SLPPPRTHTHARTHARDSSLHPDRHAPHRTGELGFARSLGRPSIH 160
            A  P  R ++PPP+ HT++      ++ H  +H  H  G +       +PS++
Sbjct: 1027 AASPFMRPTVPPPQFHTNSHIKMSGAAKHKAKHGVHLQGPVSMGLGDMQPSLN 1079

>ZN513_HUMAN (Q8N8E2) Zinc finger protein 513|
          Length = 479

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 39  LGPIRTHARTHATPPSTPTDT 101
           LG +R H RTHA PP+ P  T
Sbjct: 156 LGNLRRHQRTHAGPPTPPCPT 176

>NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 9   ANPSPAPSLRLGPIRTHARTHATPPSTPTDT 101
           A P+P PS    P   HA  H+  P++PT T
Sbjct: 31  ATPAPEPSRAPAPATPHAPEHSPAPNSPTLT 61

>IF16_HUMAN (Q16666) Gamma-interferon-inducible protein Ifi-16|
           (Interferon-inducible myeloid differentiation
           transcriptional activator) (IFI 16)
          Length = 785

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 21  PAPSLR-LGPIRTHARTHATPPSTPTDTHLT 110
           P P +  +GP  +H  T   PPSTP+ + LT
Sbjct: 524 PGPFMTSIGPAESHPHTPQMPPSTPSSSFLT 554



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 21  PAPSLR-LGPIRTHARTHATPPSTPTDTHLT 110
           P P +  +GP  +H  T   PPSTP+ + LT
Sbjct: 468 PGPFMTSIGPAESHPHTPQMPPSTPSSSFLT 498

>SETBP_MOUSE (Q9Z180) SET-binding protein (SEB)|
          Length = 1535

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 5    AGQPLSR-SLPPPRTHTHARTHARDSSLHPDRHAPHRTGELGFARSLGRPSIH 160
            A  P  R ++PPP+ H  +      ++ H  +H  H  G +G      +PS++
Sbjct: 1025 AASPFMRPTVPPPQFHASSHVKISGATKHKAKHGVHLQGTVGMGLGDIQPSLN 1077

>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region|
          Length = 153

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 32  PPPRTHTHARTHARDSSLHPDRHAPH 109
           P P T TH   H    + HP  H PH
Sbjct: 28  PHPHTPTHTHPHTPTPTPHPHPHTPH 53

>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor|
          Length = 616

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   RANPSPAPSLRLGPIRTHARTHATPPSTPT 95
           +A P P P  R  P  TH R+   PP  P+
Sbjct: 486 KAPPEPVPPPRAAPAPTHVRSPQPPPPPPS 515


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,904,944
Number of Sequences: 219361
Number of extensions: 584320
Number of successful extensions: 2604
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2593
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)