ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30b01 |
|---|---|
| Clone Library Name | barley_pub |
>STE7_SCHPO (Q10136) Protein ste7| Length = 569 Score = 34.3 bits (77), Expect = 0.23 Identities = 25/68 (36%), Positives = 34/68 (50%) Frame = -2 Query: 205 CAPVTLVPFICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAS 26 C+P V F+ +L G KL F P+ V+ SN + + TT+ S S+S Sbjct: 411 CSPDNNVTFV-NLAPG-EKLTFKIEPNDLMDEEEVVENSNMYSIPGKTVATTVCHSSSSS 468 Query: 25 GDRSALSC 2 GD SALSC Sbjct: 469 GDFSALSC 476
>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 1045 Score = 33.5 bits (75), Expect = 0.38 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 2/98 (2%) Frame = -2 Query: 292 TGRTMPP--PGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGPSTS 119 TG T PP PG V + STG +A AP T P + GY L G +T+ Sbjct: 743 TGETEPPTTPGTPVASAVTSTGAT-----LAWAPSTGDPAV----SGYDVLRVQ-GTTTT 792 Query: 118 GTARAAVKASNSSAATQRAPLTTIDRSISASGDRSALS 5 A+ V S T T R+ + +GD SALS Sbjct: 793 VVAQTTVPTVTLSGLTPSTAYTYAVRAKNVAGDVSALS 830
>ALGK_PSESM (Q887Q1) Alginate biosynthesis protein algK precursor| Length = 470 Score = 32.7 bits (73), Expect = 0.66 Identities = 29/112 (25%), Positives = 48/112 (42%) Frame = +3 Query: 132 PLLNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVEYVESGTDQPGGGMVLPVPEGAHA 311 PL +YP ++N + I W+A G Y E+G Q ++L +G +A Sbjct: 135 PLAMLYLQYPHTFPEVNAQQ-----KISQWRAAG---YPEAGLAQ----VLLYRTQGTYA 182 Query: 312 VRLGSGASVRQQLSLTRGACYSVTFSAARTCGQSERLRLSVVPVDAADAPGR 467 L S+ +Q CY + +T GQ+E+ + + +A A GR Sbjct: 183 EHLDEVESICKQALSATDICYVELATVYQTRGQTEQQAALIAQLRSAHAAGR 234
>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)| (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP) Length = 268 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +3 Query: 150 FEYPPNRSQMNGTRVTGAHAIPYWKATGPVEYVESGTDQPG 272 F P R NG R A YWKATG + + SG+ G Sbjct: 67 FFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVG 107
>FAM5B_PONPY (Q5RDR5) Protein FAM5B precursor| Length = 783 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 1 HRTERIDRQKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117 HR R K RS+ WW+ ++ YC S PG F Sbjct: 401 HRQPRFRLPKERSLSYWWNRIQSL---LYCGESTFPGTF 436
>FAM5B_HUMAN (Q9C0B6) Protein FAM5B precursor (BMP/retinoic acid-inducible| neural-specific protein 2) (DBCCR1-like protein 2) Length = 783 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 1 HRTERIDRQKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117 HR R K RS+ WW+ ++ YC S PG F Sbjct: 401 HRQPRFRLPKERSLSYWWNRIQSL---LYCGESTFPGTF 436
>CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)| Length = 268 Score = 31.2 bits (69), Expect = 1.9 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 10/95 (10%) Frame = -2 Query: 277 PPPGWSVP--------DSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGPST 122 PPP W+ P + Y GP A + AP+ P +S +P GP Sbjct: 57 PPPTWAAPFPAPKDDWAAAYGPGPTAS--AASPAPLAFGP-----PPDFSPVPAPPGPGP 109 Query: 121 SGTARA--AVKASNSSAATQRAPLTTIDRSISASG 23 A++ A A +S A +R P + RS++A+G Sbjct: 110 GILAQSLGAPGAPSSPGAPRRTPYEWMRRSVAAAG 144
>FAM5B_RAT (Q8K1M8) Protein FAM5B precursor (BMP/retinoic acid-inducible| neural-specific protein 2) Length = 783 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 1 HRTERIDRQKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117 HR R K RS+ WW+ ++ YC S PG F Sbjct: 401 HRQPRFRLPKERSLSFWWNRIQSL---LYCGESTFPGTF 436
>FAM5B_MOUSE (Q6DFY8) Protein FAM5B precursor| Length = 783 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 1 HRTERIDRQKRRSIDQWWSTARAASPRCYCSPSRLPGLF 117 HR R K RS+ WW+ ++ YC S PG F Sbjct: 401 HRQPRFRLPKERSLSFWWNRIQSL---LYCGESTFPGTF 436
>ISPE_THET8 (P83700) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 275 Score = 30.4 bits (67), Expect = 3.3 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 24/109 (22%) Frame = +3 Query: 243 YVESGTDQPGGGMVL---PVPEGAHAVRLGSGASVRQQLSLTRGACYSV---TFSAARTC 404 Y+E+ QPGG +L +PEGA LG G+S Q+ L A Y F+ ART Sbjct: 67 YLEAA-GQPGGVRILLEKRIPEGAG---LGGGSSDAAQVLLALQALYPAEVDLFALARTL 122 Query: 405 GQ----------------SERLR-LSVVPVDA-ADAPGRELPIQTVYSA 497 G ERL+ L++ PV A PG +P VY A Sbjct: 123 GADVPFFLLGRGAEARGVGERLKPLALPPVPAVVFFPGLRVPTPLVYRA 171
>ISPE_THET2 (Q72GN2) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 275 Score = 30.4 bits (67), Expect = 3.3 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 24/109 (22%) Frame = +3 Query: 243 YVESGTDQPGGGMVL---PVPEGAHAVRLGSGASVRQQLSLTRGACYSV---TFSAARTC 404 Y+E+ QPGG +L +PEGA LG G+S Q+ L A Y F+ ART Sbjct: 67 YLEAA-GQPGGVRILLEKRIPEGAG---LGGGSSDAAQVLLALQALYPAEVDLFALARTL 122 Query: 405 GQ----------------SERLR-LSVVPVDA-ADAPGRELPIQTVYSA 497 G ERL+ L++ PV A PG +P VY A Sbjct: 123 GADVPFFLLGRGAEARGVGERLKPLALPPVPAVVFFPGLRVPTPLVYRA 171
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Frame = -2 Query: 160 GYSKLPFSSGPSTSGTARAAVKASNSSAATQ---RAPLTTIDRSISAS-----------G 23 G S PF SGP+ AA A +S + + PL TI S S S G Sbjct: 423 GLSASPFESGPAVGAAGAAAEAAEHSGSGSDSYPEGPLATIPESDSESMASDLAGESSYG 482 Query: 22 DRSALS 5 R+ALS Sbjct: 483 SRAALS 488
>PKN3_MYXXA (Q9XBQ0) Serine/threonine-protein kinase pkn3 (EC 2.7.11.1)| Length = 547 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 367 APRVRLSCCRTEAPLPRRTACAPSGTGRTMPPPGW 263 APR + APLPR++A +P R PGW Sbjct: 298 APRRSANSSAVLAPLPRKSAASPQSDVRDATLPGW 332
>DSG4_RAT (Q6W3B0) Desmoglein-4 precursor| Length = 1040 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = -2 Query: 454 SAASTGTTERRSRSDWPQVRAALKVTE*QAPRVRLSCCRTEAPLPRRTACAPSGTGRTMP 275 + +T T RR + +W + AA + E + R ++ R++ + +R SG G P Sbjct: 36 NGTTTWQTVRRQKREWIKFAAACREGEDNSKRNPIARIRSDCEVSQRITYRISGAGIDRP 95 Query: 274 PPG 266 P G Sbjct: 96 PYG 98
>SAN1_YEAST (P22470) Protein SAN1| Length = 610 Score = 30.0 bits (66), Expect = 4.3 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Frame = +3 Query: 228 TGPVEYVESGTDQPGGGMVL---PVPEGAHAVRLGSGASVRQQLSLTRGACYSVTFSAAR 398 TGP + +G QP G +VL VP RL S SV QL++ R ++ + + Sbjct: 83 TGPSFGIGNGGHQPDGALVLSFRDVPASTPQDRLNSFISVAAQLAMER---FNRLLNRPK 139 Query: 399 TCGQSERLRLSVVPVDAADAPGRELPIQTV 488 + E +L V+ V +D P E P+ ++ Sbjct: 140 GISKDEFDKLPVLQV--SDLPKAEGPLCSI 167
>DSG4_MOUSE (Q7TMD7) Desmoglein-4 precursor| Length = 1041 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = -2 Query: 454 SAASTGTTERRSRSDWPQVRAALKVTE*QAPRVRLSCCRTEAPLPRRTACAPSGTGRTMP 275 + +T T RR + +W + AA + E + R ++ R++ + +R SG G P Sbjct: 36 NGTTTWQTVRRQKREWIKFAAACREGEDNSKRNPIARIRSDCEVSQRITYRISGAGIDRP 95 Query: 274 PPG 266 P G Sbjct: 96 PYG 98
>Y215_ADE02 (P03291) Hypothetical protein F-215| Length = 215 Score = 29.6 bits (65), Expect = 5.6 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 16/127 (12%) Frame = -2 Query: 334 EAPLPRRTACAPSGTGRTMPPPGWSVPD----------STYSTGPVAFQ*GMA---CA-P 197 EA P R++ S T T PPP WS PD S++ P+ CA P Sbjct: 15 EASTPSRSSWPASPT--TSPPP-WSEPDAEISRRKRSSSSWPKSPIKTTQETCRRFCARP 71 Query: 196 VTLVP--FICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASG 23 + P + + L G S S GPS+S R + S+AA+ R+P T+ RS S S Sbjct: 72 PSTTPKLILSNSLSGSS----SPGPSSS---RRGARFRRSTAASSRSPATSA-RSTS-SC 122 Query: 22 DRSALSC 2 R+A +C Sbjct: 123 PRAAPTC 129
>ATKB_HALSA (P57699) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 719 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Frame = -2 Query: 181 FICDLLGGYSKLPFSS--------GPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAS 26 ++ +GG++ L + P+T G AA++ + + T+R + R++ A+ Sbjct: 250 YLASFVGGFAGLDVAELVALLVALMPTTIGALLAAIRVAGMTRVTRRNVIAKSGRAVEAA 309 Query: 25 GDRSAL 8 GD AL Sbjct: 310 GDLDAL 315
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 29.6 bits (65), Expect = 5.6 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Frame = -2 Query: 466 RPGASAASTGTTERR--SRSDWPQVRAALKVTE*QAPRVRLSCCRTEAPLPRRTACAPSG 293 RPGA AA GTT R + + P A + ++ E PR+ P G Sbjct: 195 RPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRGPAVAAEPDEDEAPRQIRRGPGG 254 Query: 292 TGRTMPPPGWSVPDSTYSTGP 230 R PP P +T+ GP Sbjct: 255 AARPAPP-----PKTTHKPGP 270
>ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2| Length = 784 Score = 29.6 bits (65), Expect = 5.6 Identities = 28/84 (33%), Positives = 36/84 (42%) Frame = -2 Query: 475 GSSRPGASAASTGTTERRSRSDWPQVRAALKVTE*QAPRVRLSCCRTEAPLPRRTACAPS 296 G++ P A AAST T P+V AA + TE PR+ EA LP + A + Sbjct: 338 GAATPRA-AASTQRTASTEVMQVPRVAAATEATE--TPRIGTPAMVAEASLPVHSGAAEN 394 Query: 295 GTGRTMPPPGWSVPDSTYSTGPVA 224 PG S T +TG A Sbjct: 395 --------PGTSGSSKTAATGKKA 410
>ADSV_HUMAN (Q9Y6U3) Adseverin (Scinderin)| Length = 715 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +3 Query: 282 VLPVPEGAHA-VRLGSGASVRQQLSLTRGACYSVTFSAARTCGQSERLRLSVVPVDAADA 458 ++PVP+ AH +G V +RG Y + F + C Q E ++ V D Sbjct: 29 LVPVPQSAHGDFYVGDAYLVLHTAKTSRGFTYHLHFWLGKECSQDESTAAAIFTVQMDDY 88 Query: 459 PGRELPIQ 482 G + P+Q Sbjct: 89 LGGK-PVQ 95
>YEA1_YEAST (P40006) Protein YEL001C precursor| Length = 225 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +3 Query: 177 MNGTRVTGAHAIPYWKATG----PVEYVESGTDQPGGGMVLPVPEGAH 308 +NGT VT H P TG P E +GT + G + L +PEG + Sbjct: 92 VNGTIVTYPHGYPVADITGASIGPYEMEVNGTSKFGQDVTLNLPEGQY 139
>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF| N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-termi Length = 2045 Score = 29.3 bits (64), Expect = 7.3 Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 6/97 (6%) Frame = -2 Query: 310 ACAPSGTGRTMP---PPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPF 140 A A + T + P P WSVP T VA G P T+ S Sbjct: 550 AAAAAATQKIPPSSAPTAWSVPAGTTIVKTVAVTPGTTTLPATVKV--------ASSPVM 601 Query: 139 SSGPSTS--GTARAAVKASNSSAA-TQRAPLTTIDRS 38 S P+T TA A V S SSAA T P+ T+ +S Sbjct: 602 VSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKS 638
>PO5F1_MOUSE (P20263) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3) Length = 352 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 240 EYVESGTDQPGGGMVLPVPEGAHAVRLGSGA 332 EY +GT PGG + P+P G H G G+ Sbjct: 290 EYEATGTPFPGGAVSFPLPPGPHFGTPGYGS 320
>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding| protein MBD1) (Protein containing methyl-CpG-binding domain 1) Length = 605 Score = 29.3 bits (64), Expect = 7.3 Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 6/127 (4%) Frame = +3 Query: 114 VPDVDGPLLNGNFEYPPNRSQMNGTRVTGAHAIPYWKAT-----GPVEYVESGTDQ-PGG 275 +P V +G PP R + + H P K T ++ ++ T Q GG Sbjct: 386 LPSVWSESEDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATRTAQPDHTQAPTKQEAGG 445 Query: 276 GMVLPVPEGAHAVRLGSGASVRQQLSLTRGACYSVTFSAARTCGQSERLRLSVVPVDAAD 455 G VLP P G V L GAS Q+ A A+ G S + L V + AD Sbjct: 446 GFVLP-PPGTDLVFLREGASSPVQVPGPVAASTEALLQEAQCSGLSWVVALPQVKQEKAD 504 Query: 456 APGRELP 476 P Sbjct: 505 TQDEWTP 511
>KLF13_HUMAN (Q9Y2Y9) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor NSLP1) (Novel Sp1-like zin Length = 288 Score = 29.3 bits (64), Expect = 7.3 Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 21/94 (22%) Frame = -2 Query: 469 SRP-GASAASTGTT----ERRSRSDWPQVRAALKVT----------------E*QAPRVR 353 SRP GA+ A+T T ERR D + ++ E A R Sbjct: 33 SRPEGAAVAATPTLPRVEERRDGKDSASLFVVARILADLNQQAPAPAPAERREGAAARKA 92 Query: 352 LSCCRTEAPLPRRTACAPSGTGRTMPPPGWSVPD 251 + CR P P T+ G P P WS P+ Sbjct: 93 RTPCRLPPPAPEPTSPGAEGAAAAPPSPAWSEPE 126
>ENV_FOAMV (P14351) Env polyprotein (Coat polyprotein)| Length = 985 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 313 TACAPSGTGRTMPPPGWSVPDSTYSTGPVAFQ 218 T C T R + P W P+STY G +A+Q Sbjct: 444 TKCRDGETKRCLYYPLWDSPESTYDFGYLAYQ 475
>GAC1_YEAST (P28006) Serine/threonine-protein phosphatase 1 regulatory subunit| GAC1 Length = 793 Score = 28.9 bits (63), Expect = 9.5 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Frame = -2 Query: 283 TMPPPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGPSTSGTARA 104 T PPP ++ + T TG + AP T I + G SG S+ ++ + Sbjct: 454 TPPPPSSALANDTARTGKITKDKNNVLAPPTASNSIDLPILGSQHQSLYSGSSSYSSSSS 513 Query: 103 AVKAS-----------NSSAATQRAPLTTID 44 ++ +S NSS+A+ PLT +D Sbjct: 514 SISSSLSFASSNNSSTNSSSASCSFPLTELD 544
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.9 bits (63), Expect = 9.5 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 3/102 (2%) Frame = -2 Query: 349 SCCRTEAPLPRRTACAPSGTGRTMPP--PG-WSVPDSTYSTGPVAFQ*GMACAPVTLVPF 179 S +T P T P+ T T P PG + P + GPV G + AP P Sbjct: 442 SAAKTPPTTPAPTTPPPTSTHATPRPTTPGPQTTPPGPATPGPV----GASAAPTADSPL 497 Query: 178 ICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLT 53 S + GPS + + AA A+ + T R P T Sbjct: 498 TA------SPPATAPGPSAANVSVAATTATPGTRGTARTPPT 533
>PUB1_SCHPO (Q92462) E3 ubiquitin--protein ligase pub1 (EC 6.3.2.-)| Length = 767 Score = 28.9 bits (63), Expect = 9.5 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = -2 Query: 457 ASAASTGTTERRSRSDWPQVRAALKVTE*QAPRVRLSCCRTEAPL-------PRRTACAP 299 +SAAS T+R S ++ PQ + V+ A S R AP PR + Sbjct: 142 SSAASGARTQRTSITNDPQSSQSSSVSRNPASSRAGSPTRDNAPAASPASSEPRTFSSFE 201 Query: 298 SGTGRTMPPPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGPSTS 119 GR PPGW T + G + + + P + + G + SS S + Sbjct: 202 DQYGRL--PPGWE--RRTDNLGRTYYVDHNTRSTTWIRPNLSSVAGAAAAELHSSASSAN 257 Query: 118 GTARAAVKASNSSAATQRAPLTTIDRSISASGD 20 T +SN++ T+ + LT+ + + + SG+ Sbjct: 258 VTEGVQPSSSNAARRTEASVLTS-NATTAGSGE 289
>OPRK_CAVPO (P41144) Kappa-type opioid receptor (KOR-1)| Length = 380 Score = 28.9 bits (63), Expect = 9.5 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -2 Query: 361 RVRLSCCRTEAPLPRRTACA-PSGTGRTMPPPGWSVPDSTYSTGP 230 R R + + LP R AC P+G+ PGW+ PD S GP Sbjct: 3 RRRQGPAQPASELPARNACLLPNGSAWL---PGWAEPDGNGSAGP 44
>NEK4_HUMAN (P51957) Serine/threonine-protein kinase Nek4 (EC 2.7.11.1)| (NimA-related protein kinase 4) (Serine/threonine-protein kinase 2) (Serine/threonine-protein kinase NRK2) Length = 841 Score = 28.9 bits (63), Expect = 9.5 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 8/87 (9%) Frame = +3 Query: 234 PVEYVESGTDQPGGGMVLPVP---EGAHAVRLGSGASVRQQLSLTRGACYSVTFSAARTC 404 P V SG + ++ P P EG+ +G G + Q+ G S A TC Sbjct: 290 PFATVVSGEAESNHEVIHPQPLSSEGSQTYIMGEGKCLSQEKPRASGLLKSPASLKAHTC 349 Query: 405 GQ-----SERLRLSVVPVDAADAPGRE 470 Q +E +S V +D A GR+ Sbjct: 350 KQDLSNTTELATISSVNIDILPAKGRD 376
>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)| Length = 276 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +3 Query: 150 FEYPPNRSQMNGTRVTGAHAIPYWKATG 233 F P +R NG+R A A YWKATG Sbjct: 75 FFTPRDRKYPNGSRPNRAAASGYWKATG 102
>ADSV_MOUSE (Q60604) Adseverin (Scinderin) (Gelsolin-like protein)| Length = 715 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +3 Query: 282 VLPVPEGAHA-VRLGSGASVRQQLSLTRGACYSVTFSAARTCGQSERLRLSVVPVDAADA 458 ++PVP+GA+ +G V +RG Y + F + C Q E ++ V D Sbjct: 29 LVPVPQGAYGDFYVGEPYLVLHTTKSSRGFSYRLHFWLGKECSQDESTAAAIFTVQMDDY 88 Query: 459 PGRELPIQT 485 G + P+Q+ Sbjct: 89 LGGK-PVQS 96
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 28.9 bits (63), Expect = 9.5 Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 10/160 (6%) Frame = -2 Query: 472 SSRPGASAASTGTTERRSRSD-------WPQVRAALKVTE*QAPRVRLSCCRTEAPLPRR 314 +S+P AA+TG T+ R++ W Q +AA K + + + R+ Sbjct: 156 ASKPSTPAANTGPTDDEKRAERLAKLEAWKQKQAAEKERKQREAAAAGGTRSILDEIDRK 215 Query: 313 TACAPS-GTGRTMPPPGWSVPDS-TYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPF 140 + +P+ G+ ++ P + P S T P A A AP + +LG +P Sbjct: 216 SGLSPAVGSPQSSATPIDAAPASYTGKFDPKAIAKNAAPAPA-----VKSVLGDDIAVPP 270 Query: 139 SSGPS-TSGTARAAVKASNSSAATQRAPLTTIDRSISASG 23 S+ S T + + V+A+ SA + +A + ++ + G Sbjct: 271 SAKTSATFPSTKTEVQANKPSATSSKASSLKVKGNVGSFG 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,995,194 Number of Sequences: 219361 Number of extensions: 1196914 Number of successful extensions: 5177 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5169 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
