ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30a10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 371 bits (187), Expect = 2e-99 Identities = 331/379 (87%) Strand = Plus / Plus Query: 168 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 227 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 98143 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 98202 Query: 228 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 287 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 98203 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 98262 Query: 288 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 347 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 98263 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 98322 Query: 348 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 407 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 98323 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 98382 Query: 408 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 467 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 98383 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 98442 Query: 468 ccctccgtctcctccacgagatcgacgtcagcaacaaccagctcaccggcaacttcccct 527 ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 98443 acctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccct 98502 Query: 528 cccagctcctctgcctccc 546 |||| |||||||||||||| Sbjct: 98503 cccaactcctctgcctccc 98521
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 371 bits (187), Expect = 2e-99 Identities = 331/379 (87%) Strand = Plus / Minus Query: 168 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 227 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 32781398 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 32781339 Query: 228 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 287 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 32781338 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 32781279 Query: 288 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 347 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 32781278 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 32781219 Query: 348 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 407 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 32781218 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 32781159 Query: 408 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 467 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 32781158 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 32781099 Query: 468 ccctccgtctcctccacgagatcgacgtcagcaacaaccagctcaccggcaacttcccct 527 ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 32781098 acctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccct 32781039 Query: 528 cccagctcctctgcctccc 546 |||| |||||||||||||| Sbjct: 32781038 cccaactcctctgcctccc 32781020 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 24290060 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 24290001 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 24290000 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 24289941 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 24289940 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 24289881 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 24289880 acatcgccgg 24289871
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 371 bits (187), Expect = 2e-99 Identities = 331/379 (87%) Strand = Plus / Minus Query: 168 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 227 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 32871908 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 32871849 Query: 228 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 287 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 32871848 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 32871789 Query: 288 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 347 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 32871788 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 32871729 Query: 348 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 407 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 32871728 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 32871669 Query: 408 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 467 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 32871668 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 32871609 Query: 468 ccctccgtctcctccacgagatcgacgtcagcaacaaccagctcaccggcaacttcccct 527 ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 32871608 acctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccct 32871549 Query: 528 cccagctcctctgcctccc 546 |||| |||||||||||||| Sbjct: 32871548 cccaactcctctgcctccc 32871530 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Minus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 24207529 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 24207470 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 24207469 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 24207410 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 24207409 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 24207350 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 24207349 acatcgccgg 24207340
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 371 bits (187), Expect = 2e-99 Identities = 331/379 (87%) Strand = Plus / Plus Query: 168 cgaccaacaactcgaggctggagaaggcctacgtggcgctgcaggcgctgaagaaggcca 227 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 231 cgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgcca 290 Query: 228 tcacggacgaccccaagaacatgaccaacaactggtgcggccccgacgtgtgcagctacc 287 |||| ||||||||||||||| |||| ||| ||||||||| || || |||||| ||||| Sbjct: 291 tcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctact 350 Query: 288 acggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcg 347 |||||| ||||||||| |||||||||||||||| ||||||||||| || ||| ||| | Sbjct: 351 tcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtgg 410 Query: 348 acctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgacc 407 ||||||||||||||||| |||||||||| || ||||||||||| ||||| ||| |||||| Sbjct: 411 acctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacc 470 Query: 408 tcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgct 467 |||||||||||||||||||||||||| | ||||||||| | ||||| ||| | |||||| Sbjct: 471 tcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgca 530 Query: 468 ccctccgtctcctccacgagatcgacgtcagcaacaaccagctcaccggcaacttcccct 527 ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 531 acctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccct 590 Query: 528 cccagctcctctgcctccc 546 |||| |||||||||||||| Sbjct: 591 cccaactcctctgcctccc 609
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 200 bits (101), Expect = 4e-48 Identities = 303/369 (82%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 197 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 256 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 194 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 253 Query: 257 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 316 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 254 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 313 Query: 317 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 376 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 314 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 373 Query: 377 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 436 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 374 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 433 Query: 437 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 496 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 434 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 493 Query: 497 agcaacaaccagctcaccggcaacttcccctcccagctcctctgcctcccc-acgtccag 555 |||||||||| ||| ||||| |||||| ||| |||||||||||||| ||||| || Sbjct: 494 agcaacaaccgcctcgccggcggcttcccggaccacatcctctgcctccccaacgtcaag 553 Query: 556 tacgtcgac 564 ||||||||| Sbjct: 554 tacgtcgac 562 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagct 510 |||||||||||||||||||||| Sbjct: 843 tcgacgtcagcaacaaccagct 864
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 200 bits (101), Expect = 4e-48 Identities = 303/369 (82%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 197 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 256 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 4062812 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 4062753 Query: 257 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 316 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 4062752 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 4062693 Query: 317 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 376 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 4062692 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 4062633 Query: 377 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 436 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 4062632 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 4062573 Query: 437 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 496 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 4062572 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 4062513 Query: 497 agcaacaaccagctcaccggcaacttcccctcccagctcctctgcctcccc-acgtccag 555 |||||||||| ||| ||||| |||||| ||| |||||||||||||| ||||| || Sbjct: 4062512 agcaacaaccgcctcgccggcggcttcccggaccacatcctctgcctccccaacgtcaag 4062453 Query: 556 tacgtcgac 564 ||||||||| Sbjct: 4062452 tacgtcgac 4062444 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 tcgacgtcagcaacaaccagct 510 |||||||||||||||||||||| Sbjct: 4062163 tcgacgtcagcaacaaccagct 4062142
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 200 bits (101), Expect = 4e-48 Identities = 303/369 (82%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 197 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 256 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 55670 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 55611 Query: 257 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 316 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 55610 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 55551 Query: 317 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 376 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 55550 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 55491 Query: 377 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 436 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 55490 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 55431 Query: 437 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 496 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 55430 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 55371 Query: 497 agcaacaaccagctcaccggcaacttcccctcccagctcctctgcctcccc-acgtccag 555 |||||||||| ||| ||||| |||||| ||| |||||||||||||| ||||| || Sbjct: 55370 agcaacaaccgcctcgccggcggcttcccggaccacatcctctgcctccccaacgtcaag 55311 Query: 556 tacgtcgac 564 ||||||||| Sbjct: 55310 tacgtcgac 55302 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 489 tcgacgtcagcaacaaccagct 510 |||||||||||||||||||||| Sbjct: 55021 tcgacgtcagcaacaaccagct 55000
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 200 bits (101), Expect = 4e-48 Identities = 303/369 (82%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 197 tacgtggcgctgcaggcgctgaagaaggccatcacggacgaccccaagaacatgaccaac 256 ||||||||||||||||||||| | | | |||| ||||||||||||||| | ||| | Sbjct: 194 tacgtggcgctgcaggcgctgcggcggcgcgtcaccgacgaccccaagaacctcaccggc 253 Query: 257 aactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcgacggcgcccgac 316 ||||||||||||||||||||| ||||| ||||||||||||||| | ||||| ||| Sbjct: 254 gggtggtgcggccccgacgtgtgccgctacttcggcgtctactgcgccgccgcgccggac 313 Query: 317 gacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacg 376 ||||| ||||| |||||||||| | |||||||||||||||||||| |||||| ||| Sbjct: 314 gacccgtgcgccgccaccgtcgccggcatcgacctcaaccacggcgacctcgccgccacc 373 Query: 377 ctgccggaggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg 436 || || || ||||| ||||| ||| ||||||||||||| ||||||||||||||||| | Sbjct: 374 ctccccgacgagctcggcctcctcaccgacctcgccgtgctccacctcaactccaaccgc 433 Query: 437 ttctgcggcgcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtc 496 |||| |||||||||||| ||| | |||| | ||| |||||||||||| |||||||| Sbjct: 434 ttctccggcgcgctccccgacaccctccccaagctctccctcctccacgagctcgacgtc 493 Query: 497 agcaacaaccagctcaccggcaacttcccctcccagctcctctgcctcccc-acgtccag 555 |||||||||| ||| ||||| |||||| ||| |||||||||||||| ||||| || Sbjct: 494 agcaacaaccgcctcgccggcggcttcccggaccacatcctctgcctccccaacgtcaag 553 Query: 556 tacgtcgac 564 ||||||||| Sbjct: 554 tacgtcgac 562 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagct 510 |||||||||||||||||||||| Sbjct: 843 tcgacgtcagcaacaaccagct 864
>gb|AY106034.1| Zea mays PCO099903 mRNA sequence Length = 687 Score = 176 bits (89), Expect = 5e-41 Identities = 176/201 (87%), Gaps = 3/201 (1%) Strand = Plus / Plus Query: 388 gctgggcctgctctccgacctcgccgtcttccacctcaactccaacagg-ttctgcgg-c 445 ||||||||| || ||||||||||||||||||||||||||||||||| | ||| |||| | Sbjct: 8 gctgggcctcctgtccgacctcgccgtcttccacctcaactccaaccgccttcagcgggc 67 Query: 446 gcgctcccggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaac 505 | ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68 tccctccccgactcgctccgctccctccacctcctccacgagatcgacgtcagcaacaac 127 Query: 506 cagctcaccggcaacttcccctcccagctcctctgcctcccc-acgtccagtacgtcgac 564 |||||| |||| |||||| | |||||||||||||||||| ||||||||||||| ||| Sbjct: 128 cagctctccgggcccttcccgccgcagctcctctgcctccccaacgtccagtacgtggac 187 Query: 565 atcagggtttacaacttctgc 585 |||||| | ||||||||||| Sbjct: 188 atcaggttcaacaacttctgc 208
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 123 bits (62), Expect = 7e-25 Identities = 146/174 (83%) Strand = Plus / Plus Query: 333 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 392 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 392 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 451 Query: 393 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 452 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 452 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 511 Query: 453 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 512 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 123 bits (62), Expect = 7e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 333 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 392 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 4180022 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 4179963 Query: 393 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 452 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 4179962 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 4179903 Query: 453 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 4179902 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 4179849 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 23281764 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 23281823 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 23281824 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 23281877 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 392 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 14422072 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 14422018 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 23281906 ctcctccacgagctcgacctcagcaacaacc 23281936 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 cggcggcgttcctggcgctgccggtgg 116 |||||||||||||||||||| |||||| Sbjct: 7437123 cggcggcgttcctggcgctggcggtgg 7437149 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 91 ggcggcgttcctggcgctgccggtggtgg 119 ||||||||||||||||||| || |||||| Sbjct: 6768939 ggcggcgttcctggcgctggcgctggtgg 6768911 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ggcgttcctggcgctgccggtggtggcg 121 ||||| ||||||||||||| |||||||| Sbjct: 28231601 ggcgtacctggcgctgccgatggtggcg 28231574 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 acgagatcgacgtcagcaacaacc 506 ||||| |||||||||||||||||| Sbjct: 14421981 acgagctcgacgtcagcaacaacc 14421958
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 123 bits (62), Expect = 7e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 333 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 392 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 17989 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 17930 Query: 393 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 452 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 17929 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 17870 Query: 453 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 17869 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 17816
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 123 bits (62), Expect = 7e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 333 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 392 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 126993 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 126934 Query: 393 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 452 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 126933 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 126874 Query: 453 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 126873 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 126820
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 123 bits (62), Expect = 7e-25 Identities = 146/174 (83%) Strand = Plus / Plus Query: 333 ccgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctgg 392 |||||||| |||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 392 ccgtcgccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcg 451 Query: 393 gcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcc 452 |||||||| |||||||||| | ||||||||||||||||| | |||||||||| ||||| Sbjct: 452 gcctgctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcc 511 Query: 453 cggacgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 ||| | | |||||| |||||| ||||| |||||| ||||| |||||||||||| Sbjct: 512 cggccaccctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 241 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 300 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 301 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 360 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 361 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 420 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 421 acatcgccgg 430
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 90564 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 90623 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 90624 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 90683 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 90684 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 90743 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 90744 acatcgccgg 90753
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full insert sequence Length = 1511 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 275 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 334 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 335 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 394 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 395 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 454 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 455 acatcgccgg 464
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full insert sequence Length = 1642 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 275 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 334 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 335 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 394 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 395 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 454 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 455 acatcgccgg 464
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full insert sequence Length = 1451 Score = 107 bits (54), Expect = 4e-20 Identities = 156/190 (82%) Strand = Plus / Plus Query: 183 ggctggagaaggcctacgtggcgctgcaggcgctgaagaaggccatcacggacgacccca 242 |||||||| ||| ||||||||| | |||||| |||| | |||||||| || ||||||| Sbjct: 271 ggctggaggcggcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggacccca 330 Query: 243 agaacatgaccaacaactggtgcggccccgacgtgtgcagctaccacggcgtctactgcg 302 ||||| |||| | | |||||||| || |||||||| |||| |||||||||||||| Sbjct: 331 agaacctgacggaggattggtgcgggccgttcgtgtgcaactacaccggcgtctactgcg 390 Query: 303 cgacggcgcccgacgacccctgcgcgcgcaccgtcgcctccgtcgacctcaaccacggcg 362 || ||||||||||||| || || | |||||||||| |||||||||||||||||||| Sbjct: 391 cggcggcgcccgacgatccgcacgtcctcaccgtcgccggcgtcgacctcaaccacggcg 450 Query: 363 acatcgccgg 372 |||||||||| Sbjct: 451 acatcgccgg 460
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full insert sequence Length = 1122 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 276 tgtgcagctaccacggcgtctactgcgcgacggcgcccgacgacccctgcgcgcgcaccg 335 |||||| |||| |||||||||||||||| ||||||||||||| || || | ||||| Sbjct: 1 tgtgcaactacaccggcgtctactgcgcggcggcgcccgacgatccgcacgtcctcaccg 60 Query: 336 tcgcctccgtcgacctcaaccacggcgacatcgccgg 372 ||||| |||||||||||||||||||||||||||||| Sbjct: 61 tcgccggcgtcgacctcaaccacggcgacatcgccgg 97
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 357 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 416 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 417 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 470 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 499 ctcctccacgagctcgacctcagcaacaacc 529
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 7462 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 7521 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 7522 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 7575 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 7604 ctcctccacgagctcgacctcagcaacaacc 7634
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 68506 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 68565 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 68566 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 68619 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 68648 ctcctccacgagctcgacctcagcaacaacc 68678
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 416 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 475 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 476 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 529 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 558 ctcctccacgagctcgacctcagcaacaacc 588
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccggcacgctgccggaggagctggg 393 ||||||||||||||| |||||||||| |||||| || ||| || || || ||||| || Sbjct: 415 cgtcgcctccgtcgatctcaaccacgccgacatggcgggccacctccccgacgagctcgg 474 Query: 394 cctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgc 447 ||||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct: 475 cctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcggcgc 528 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 557 ctcctccacgagctcgacctcagcaacaacc 587
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 347 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 406 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 310 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 369 Query: 407 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 466 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 370 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 429 Query: 467 tccctccgtctcctccacgagatcgacgtcagcaacaacc 506 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 430 cgcctccgccgcctccacgagctcgacctcagcaacaacc 469
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 347 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 406 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 125206 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 125147 Query: 407 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 466 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 125146 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 125087 Query: 467 tccctccgtctcctccacgagatcgacgtcagcaacaacc 506 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 125086 cgcctccgccgcctccacgagctcgacctcagcaacaacc 125047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 347 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 406 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 4757201 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 4757142 Query: 407 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 466 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 4757141 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 4757082 Query: 467 tccctccgtctcctccacgagatcgacgtcagcaacaacc 506 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 4757081 cgcctccgccgcctccacgagctcgacctcagcaacaacc 4757042 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 24438180 cgctgctgctcgcggcggcg 24438199 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcgccgccggcgaccaac 175 |||||||||||||||||||| Sbjct: 10067259 gggcgccgccggcgaccaac 10067240 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tacgtggcgctgcaggcgctgaag 220 |||| ||||||||||||||||||| Sbjct: 5390601 tacgaggcgctgcaggcgctgaag 5390624
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 79.8 bits (40), Expect = 9e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 347 gacctcaaccacggcgacatcgccggcacgctgccggaggagctgggcctgctctccgac 406 ||||||||||||||||||||||| || || || | ||||| || ||||| ||||| Sbjct: 29609 gacctcaaccacggcgacatcgcggggtacctccccgccgagctcgggttgctcaccgac 29550 Query: 407 ctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgc 466 ||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||| Sbjct: 29549 ctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggacgccctccgc 29490 Query: 467 tccctccgtctcctccacgagatcgacgtcagcaacaacc 506 |||||| | |||||||||| ||||| |||||||||||| Sbjct: 29489 cgcctccgccgcctccacgagctcgacctcagcaacaacc 29450
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 397 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 456 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 390 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 449 Query: 457 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 450 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 499 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 347 gacctcaaccacggcgacatcgccgg 372 ||||||||||||| |||||||||||| Sbjct: 337 gacctcaaccacgccgacatcgccgg 362 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 283 ctaccacggcgtctactgcgcgacggcgcccg 314 |||| ||||||||||||||||| || |||||| Sbjct: 261 ctacaacggcgtctactgcgcgccgtcgcccg 292
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 397 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 456 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 2022916 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 2022857 Query: 457 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 2022856 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 2022807 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 gacctcaaccacggcgacatcgccgg 372 ||||||||||||| |||||||||||| Sbjct: 2022969 gacctcaaccacgccgacatcgccgg 2022944 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 283 ctaccacggcgtctactgcgcgacggcgcccg 314 |||| ||||||||||||||||| || |||||| Sbjct: 2023045 ctacaacggcgtctactgcgcgccgtcgcccg 2023014
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 397 gctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcgcgctcccgga 456 |||| ||||||||||| || ||||||||||||||||| | |||||||||| | || || Sbjct: 73124 gctccccgacctcgccctcatccacctcaactccaaccgcttctgcggcgtcgtgcccga 73065 Query: 457 cgcgctccgctccctccgtctcctccacgagatcgacgtcagcaacaacc 506 | || ||||| |||||| | ||||||||| ||||| |||||||||||| Sbjct: 73064 cacgttccgccgcctccgcttgctccacgagctcgacctcagcaacaacc 73015 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 gacctcaaccacggcgacatcgccgg 372 ||||||||||||| |||||||||||| Sbjct: 73177 gacctcaaccacgccgacatcgccgg 73152 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 283 ctaccacggcgtctactgcgcgacggcgcccg 314 |||| ||||||||||||||||| || |||||| Sbjct: 73253 ctacaacggcgtctactgcgcgccgtcgcccg 73222
>emb|Z34465.1|ZMEXTENS Z.mays (B73) gene for extensin-like protein Length = 4431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 385 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 444 |||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 898 ggagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 957 Query: 445 c 445 | Sbjct: 958 c 958 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 482 cacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||||||||| Sbjct: 995 cacgagttcgacgtcagcaacaacc 1019
>gb|AY109630.1| Zea mays CL844_2 mRNA sequence Length = 3567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 385 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 444 |||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 435 ggagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 494 Query: 445 c 445 | Sbjct: 495 c 495 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 482 cacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||||||||| Sbjct: 532 cacgagttcgacgtcagcaacaacc 556
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 gagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggc 445 ||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | ||||||||| Sbjct: 436 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcggc 495
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 386 gagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggc 445 ||||| ||||||||| ||||||||||| |||||||| ||||| ||||| | ||||||||| Sbjct: 845 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcggc 904
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 392 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 403 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 457 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 acgagatcgacgtcagcaacaacc 506 ||||| |||||||||||||||||| Sbjct: 494 acgagctcgacgtcagcaacaacc 517
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 392 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 83469 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 83415 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 acgagatcgacgtcagcaacaacc 506 ||||| |||||||||||||||||| Sbjct: 83378 acgagctcgacgtcagcaacaacc 83355
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 392 ggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 ||||| || |||||||||||||| ||||||||||||||||| | |||||||||| Sbjct: 496 ggcctcctgtccgacctcgccgtgctccacctcaactccaaccgcttctgcggcg 550 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 acgagatcgacgtcagcaacaacc 506 ||||| |||||||||||||||||| Sbjct: 587 acgagctcgacgtcagcaacaacc 610
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 417 tccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgctccctccgtc 476 ||||||||||||||||| | |||||||||| |||||| ||| | || | |||| | | Sbjct: 29238999 tccacctcaactccaaccgcttctgcggcgtgctccccgacaccttctcccacctcaggc 29239058 Query: 477 tcctccacgagatcgacgtcagcaacaacc 506 ||||||||||| ||||| |||||||||||| Sbjct: 29239059 tcctccacgagctcgacatcagcaacaacc 29239088 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 256 caactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcg 304 |||||||| |||||||||||||||| ||||| ||||||| | ||||||| Sbjct: 29238835 caactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 29238883 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 tcgacctcaaccacggcgacatcgccgg 372 ||||||||||||||| |||||||||||| Sbjct: 29238924 tcgacctcaaccacgccgacatcgccgg 29238951 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 gatgatggggtcgacgacggcggcg 97 |||||| |||||||||||||||||| Sbjct: 15954191 gatgatcgggtcgacgacggcggcg 15954167
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 417 tccacctcaactccaacaggttctgcggcgcgctcccggacgcgctccgctccctccgtc 476 ||||||||||||||||| | |||||||||| |||||| ||| | || | |||| | | Sbjct: 1797 tccacctcaactccaaccgcttctgcggcgtgctccccgacaccttctcccacctcaggc 1856 Query: 477 tcctccacgagatcgacgtcagcaacaacc 506 ||||||||||| ||||| |||||||||||| Sbjct: 1857 tcctccacgagctcgacatcagcaacaacc 1886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 256 caactggtgcggccccgacgtgtgcagctaccacggcgtctactgcgcg 304 |||||||| |||||||||||||||| ||||| ||||||| | ||||||| Sbjct: 1633 caactggtccggccccgacgtgtgcggctacaacggcgtgttctgcgcg 1681 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 345 tcgacctcaaccacggcgacatcgccgg 372 ||||||||||||||| |||||||||||| Sbjct: 1722 tcgacctcaaccacgccgacatcgccgg 1749
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 385 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 444 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 59720 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 59661 Query: 445 c 445 | Sbjct: 59660 c 59660
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 385 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 444 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 25452829 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 25452770 Query: 445 c 445 | Sbjct: 25452769 c 25452769
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 385 ggagctgggcctgctctccgacctcgccgtcttccacctcaactccaacaggttctgcgg 444 |||||| ||||| ||| ||||||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 25771499 ggagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttctgcgg 25771440 Query: 445 c 445 | Sbjct: 25771439 c 25771439 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 442 cggcgcgctcccggacgcgctcc 464 ||||||||||||||||||||||| Sbjct: 5077014 cggcgcgctcccggacgcgctcc 5076992
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 469 cctccgtctcctccacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||| ||||| |||||||||||| Sbjct: 2571 cctccgcctcctccacgagctcgacctcagcaacaacc 2608
>ref|NM_188650.1| Oryza sativa (japonica cultivar-group), Ozsa8253 predicted mRNA Length = 900 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 cggcggcgttcctggcgctgccggtgg 116 |||||||||||||||||||| |||||| Sbjct: 350 cggcggcgttcctggcgctggcggtgg 376
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 372 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 21747237 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 21747199 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 402 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 21747169 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 21747125 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 482 cacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||||||||| Sbjct: 21747089 cacgagctcgacgtcagcaacaacc 21747065 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 tcgccgctgctgctcgcggcggcg 145 ||||||||||||||| |||||||| Sbjct: 7805993 tcgccgctgctgctcccggcggcg 7806016
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 491 gacgtcagcaacaaccagctcaccggc 517 ||||||||||| ||||||||||||||| Sbjct: 18321521 gacgtcagcaagaaccagctcaccggc 18321547
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 289 cggcgtctactgcgcgacggcgc 311 ||||||||||||||||||||||| Sbjct: 449918 cggcgtctactgcgcgacggcgc 449940
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 cggcggcgttcctggcgctgccggtgg 116 |||||||||||||||||||| |||||| Sbjct: 98151 cggcggcgttcctggcgctggcggtgg 98177
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 491 gacgtcagcaacaaccagctcaccggc 517 ||||||||||| ||||||||||||||| Sbjct: 36257 gacgtcagcaagaaccagctcaccggc 36283
>dbj|AK110348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G12, full insert sequence Length = 929 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 491 gacgtcagcaacaaccagctcaccggc 517 ||||||||||| ||||||||||||||| Sbjct: 477 gacgtcagcaagaaccagctcaccggc 503
>dbj|AK108936.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B02, full insert sequence Length = 1020 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 cggcggcgttcctggcgctgccggtgg 116 |||||||||||||||||||| |||||| Sbjct: 255 cggcggcgttcctggcgctggcggtgg 281
>dbj|AK106650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F09, full insert sequence Length = 1720 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 442 cggcgcgctcccggacgcgctcc 464 ||||||||||||||||||||||| Sbjct: 267 cggcgcgctcccggacgcgctcc 289
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 ctcctccacgagatcgacgtcagcaacaacc 506 |||||||||||| ||||| |||||||||||| Sbjct: 29 ctcctccacgagctcgacatcagcaacaacc 59
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 372 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 21675582 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 21675544 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 402 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 21675514 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 21675470 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 482 cacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||||||||| Sbjct: 21675434 cacgagctcgacgtcagcaacaacc 21675410 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 tcgccgctgctgctcgcggcggcg 145 ||||||||||||||| |||||||| Sbjct: 7805874 tcgccgctgctgctcccggcggcg 7805897
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 334 cgtcgcctccgtcgacctcaaccacggcgacatcgccgg 372 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 65314 cgtcgccggcgtcgacctcaacggcggcgacatcgccgg 65352 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 482 cacgagatcgacgtcagcaacaacc 506 |||||| |||||||||||||||||| Sbjct: 65462 cacgagctcgacgtcagcaacaacc 65486 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 402 ccgacctcgccgtcttccacctcaactccaacaggttctgcggcg 446 |||||||||| | |||||| ||||||||||| | |||||||||| Sbjct: 65382 ccgacctcgcgctgttccacgtcaactccaaccgcttctgcggcg 65426
>gb|AC101687.11| Mus musculus chromosome 8, clone RP23-205D7, complete sequence Length = 185997 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 aactcgaggctggagaaggcct 197 |||||||||||||||||||||| Sbjct: 166435 aactcgaggctggagaaggcct 166414
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 aactcgaggctggagaaggcct 197 |||||||||||||||||||||| Sbjct: 74464 aactcgaggctggagaaggcct 74443
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 gacgatgatggggtcgacgacg 91 |||||||||||||||||||||| Sbjct: 6215 gacgatgatggggtcgacgacg 6194
>ref|XM_846393.1| PREDICTED: Canis familiaris similar to beta-1,4-mannosyltransferase, transcript variant 2 (LOC490017), mRNA Length = 1650 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 102 tggcgctgccggtggtggcgtcgccgctgctgct 135 |||||||||||| ||||||| || |||||||||| Sbjct: 17 tggcgctgccggcggtggcggcgtcgctgctgct 50
>ref|XM_547137.2| PREDICTED: Canis familiaris similar to beta-1,4-mannosyltransferase, transcript variant 1 (LOC490017), mRNA Length = 1572 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 102 tggcgctgccggtggtggcgtcgccgctgctgct 135 |||||||||||| ||||||| || |||||||||| Sbjct: 17 tggcgctgccggcggtggcggcgtcgctgctgct 50
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 139 ggcggcgcagccggtgggggcgccgccggc 168 |||| ||||||||||| ||||||||||||| Sbjct: 205243 ggcgacgcagccggtgcgggcgccgccggc 205214
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 ggacgaccccaagaacatgacc 253 |||||||||||||||||||||| Sbjct: 125594 ggacgaccccaagaacatgacc 125573
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 ctgaagaaggccatcacggacg 236 |||||||||||||||||||||| Sbjct: 50824 ctgaagaaggccatcacggacg 50803
>ref|NM_114567.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT3G47000 mRNA, complete cds Length = 2015 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1756 aaccagctcactggcaacttcccct 1732
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 ggcggcgttcctggcgctgccggtggtgg 119 ||||||||||||||||||| || |||||| Sbjct: 27 ggcggcgttcctggcgctggcgctggtgg 55
>ref|XM_483242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1439 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 633 tcgacctcaccaacaaccagctcaccggc 661
>ref|XM_507592.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1134_H03.31 mRNA Length = 1555 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 627 tcgacctcaccaacaaccagctcaccggc 655
>ref|XM_507286.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1134_H03.31 mRNA Length = 1562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 632 tcgacctcaccaacaaccagctcaccggc 660
>gb|AY582739.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly protein (HydEF) mRNA, complete cds Length = 3456 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 gtggtggcgtcgccgctgctgctcgcggcggcg 145 ||||||||||||||||||| || ||||||||| Sbjct: 1861 gtggtggcgtcgccgctgcggccggcggcggcg 1893
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gtcgacgatgatggggtcgacgacg 91 |||| |||||||||||||||||||| Sbjct: 150465 gtcgccgatgatggggtcgacgacg 150441
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12 Length = 140680 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 31333 aaccagctcactggcaacttcccct 31357
>gb|BT008366.1| Arabidopsis thaliana At3g47000 gene, complete cds Length = 1827 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1733 aaccagctcactggcaacttcccct 1709
>gb|AY093074.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein (At3g47000) mRNA, complete cds Length = 1991 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1756 aaccagctcactggcaacttcccct 1732
>gb|AY093346.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein (At3g47000) mRNA, complete cds Length = 1924 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1733 aaccagctcactggcaacttcccct 1709
>gb|AY062716.1| Arabidopsis thaliana beta-D-glucan exohydrolase-like protein (At3g47000; F13I12.50) mRNA, complete cds Length = 2016 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1756 aaccagctcactggcaacttcccct 1732
>gb|AF428358.1|AF428358 Arabidopsis thaliana AT3g47000/F13I12_50 mRNA, complete cds Length = 586 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 326 aaccagctcactggcaacttcccct 302
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 25009490 tcgacctcaccaacaaccagctcaccggc 25009462
>emb|BX823770.1|CNS0A4WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS73ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1972 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 503 aaccagctcaccggcaacttcccct 527 ||||||||||| ||||||||||||| Sbjct: 1757 aaccagctcactggcaacttcccct 1733
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 cgctgctgctcgcggcggcgc 146 ||||||||||||||||||||| Sbjct: 2776039 cgctgctgctcgcggcggcgc 2776019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ccctgcgcgcgcaccgtcgc 339 |||||||||||||||||||| Sbjct: 2257854 ccctgcgcgcgcaccgtcgc 2257873 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctcgcggcggcgcagccggt 153 |||||||||||||||||||| Sbjct: 2126567 ctcgcggcggcgcagccggt 2126586 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctcgcggcggcgcagccgg 152 |||||||||||||||||||| Sbjct: 339446 gctcgcggcggcgcagccgg 339465
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 91 ggcggcgttcctggcgctgccggtggtgg 119 ||||||||||||||||||| || |||||| Sbjct: 121091 ggcggcgttcctggcgctggcgctggtgg 121063
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 91 ggcggcgttcctggcgctgccggtggtgg 119 ||||||||||||||||||| || |||||| Sbjct: 51000 ggcggcgttcctggcgctggcgctggtgg 50972
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 352 caaccacggcgacatcgccgg 372 ||||||||||||||||||||| Sbjct: 6656952 caaccacggcgacatcgccgg 6656932 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 cgacctcaaccacggcgacatcgc 369 |||||||||||||||||| ||||| Sbjct: 6162894 cgacctcaaccacggcgagatcgc 6162917
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 gatgatggggtcgacgacggcggcg 97 |||||| |||||||||||||||||| Sbjct: 87640 gatgatcgggtcgacgacggcggcg 87616
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 gatgatggggtcgacgacggcggcg 97 |||||| |||||||||||||||||| Sbjct: 167194 gatgatcgggtcgacgacggcggcg 167170
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 65606 tcgacctcaccaacaaccagctcaccggc 65578
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 111205 tcgacctcaccaacaaccagctcaccggc 111177
>dbj|AK120908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031M05, full insert sequence Length = 1555 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 627 tcgacctcaccaacaaccagctcaccggc 655
>dbj|AK120866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025G09, full insert sequence Length = 1439 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 633 tcgacctcaccaacaaccagctcaccggc 661
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gtcgacgatgatggggtcgacgacg 91 |||| |||||||||||||||||||| Sbjct: 98946 gtcgccgatgatggggtcgacgacg 98970
>dbj|AK060670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-G04, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 489 tcgacgtcagcaacaaccagctcaccggc 517 ||||| ||| ||||||||||||||||||| Sbjct: 632 tcgacctcaccaacaaccagctcaccggc 660
>ref|NM_196829.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0018F16.20), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 39 cctggcgctgccggtggtgg 58
>ref|NM_192082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 ggcgttcctggcgctgccggtggtggcg 121 ||||| ||||||||||||| |||||||| Sbjct: 114 ggcgtacctggcgctgccgatggtggcg 141
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tacgtggcgctgcaggcgctgaag 220 |||| ||||||||||||||||||| Sbjct: 77275 tacgaggcgctgcaggcgctgaag 77298
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 gctgctcgcggcggcgcagccggt 153 ||||||||||||||||||| |||| Sbjct: 409934 gctgctcgcggcggcgcaggcggt 409911
>gb|AY177757.1| Burkholderia pseudomallei 08 two-partner secretion system gene cluster, partial sequence Length = 20237 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 acggcgacatcgccggcacgctgc 380 |||||| ||||||||||||||||| Sbjct: 2769 acggcggcatcgccggcacgctgc 2792
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgcgacggcgcccgacgac 319 |||||||||||||||||||| Sbjct: 3158870 gcgcgacggcgcccgacgac 3158851 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cgctgccggaggagctgggc 394 |||||||||||||||||||| Sbjct: 977928 cgctgccggaggagctgggc 977947
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03, complete sequence Length = 151814 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcgccgccggcgaccaac 175 |||||||||||||||||||| Sbjct: 52775 gggcgccgccggcgaccaac 52756
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 40853 cgctgctgctcgcggcggcg 40872
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 128 ctgctgctcgcggcggcgcagccggtgg 155 |||||||||||||||||| ||| ||||| Sbjct: 1671297 ctgctgctcgcggcggcggagctggtgg 1671270
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cgctgccggaggagctgggc 394 |||||||||||||||||||| Sbjct: 2019729 cgctgccggaggagctgggc 2019748 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgcgacggcgcccgacgac 319 |||||||||||||||||||| Sbjct: 1642143 gcgcgacggcgcccgacgac 1642162
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 493462 cgctgctgctcgcggcggcg 493443
>gb|AF431735.1| Leymus racemosus high-molecular-weight glutenin subunit 1Ax-like gene sequence Length = 2687 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgatgatggggtcgacgacg 91 |||||||||||||||||||| Sbjct: 2417 cgatgatggggtcgacgacg 2398
>ref|XM_801732.1| Trypanosoma cruzi strain CL Brener DNA-repair protein (Tc00.1047053510665.40) partial mRNA Length = 2430 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 acctcgccgtcttccacctc 424 |||||||||||||||||||| Sbjct: 515 acctcgccgtcttccacctc 496
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgatgatggggtcgacgacg 91 |||||||||||||||||||| Sbjct: 60710 cgatgatggggtcgacgacg 60691
>ref|XM_541119.2| PREDICTED: Canis familiaris similar to interleukin 20 receptor, alpha (LOC484002), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gctgctgctcgcggcggcgc 146 |||||||||||||||||||| Sbjct: 87 gctgctgctcgcggcggcgc 106
>emb|CR637419.1|CNS0EQSX Tetraodon nigroviridis full-length cDNA Length = 1105 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cggtggtggcgtcgccgctg 130 |||||||||||||||||||| Sbjct: 259 cggtggtggcgtcgccgctg 240
>gb|AC124969.12| Medicago truncatula clone mth2-15o15, complete sequence Length = 134863 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgc 128 |||||||||||||||||||| Sbjct: 7834 gccggtggtggcgtcgccgc 7853
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gcgcgacggcgcccgacgac 319 |||||||||||||||||||| Sbjct: 323778 gcgcgacggcgcccgacgac 323759
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 cggcgcagccggtgggggcgccgc 164 ||||||||||||||| |||||||| Sbjct: 4580329 cggcgcagccggtggcggcgccgc 4580352
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tacgtggcgctgcaggcgctgaag 220 |||| ||||||||||||||||||| Sbjct: 76115 tacgaggcgctgcaggcgctgaag 76138
>emb|AL118525.17|HSBA298O6 Human DNA sequence from clone RP11-298O6 on chromosome 20 Contains the PTGIS gene for prostaglandin I2 (prostacyclin) synthase, ESTs, STSs, GSSs and a CpG Island, complete sequence Length = 103747 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acatatgctacaacacaaat 20 |||||||||||||||||||| Sbjct: 13265 acatatgctacaacacaaat 13246
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cgctgccggaggagctgggc 394 |||||||||||||||||||| Sbjct: 2357038 cgctgccggaggagctgggc 2357019 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcgcgacggcgcccgacgac 319 |||||||||||||||||||| Sbjct: 1529222 gcgcgacggcgcccgacgac 1529241
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gctgctgctcgcggcggcgc 146 |||||||||||||||||||| Sbjct: 274284 gctgctgctcgcggcggcgc 274303
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcagctaccacggcgtctac 298 |||||||||||||||||||| Sbjct: 2835420 gcagctaccacggcgtctac 2835401
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 131700 cctggcgctgccggtggtgg 131719
>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186714 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gtcgacgacggcggcgttcctggc 105 |||||||||||||||||| ||||| Sbjct: 63150 gtcgacgacggcggcgttgctggc 63127
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ggcgctgcaggcgctgaaga 221 |||||||||||||||||||| Sbjct: 2288321 ggcgctgcaggcgctgaaga 2288302
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 105265 cctggcgctgccggtggtgg 105246
>gb|AE009811.1|AE009811 Pyrobaculum aerophilum strain IM2 section 66 of 201 of the complete genome Length = 14032 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 gagctgggcctgctctccgacctcgccg 413 |||||| |||||| |||||||||||||| Sbjct: 632 gagctgagcctgccctccgacctcgccg 659
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence Length = 193884 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ctcccagctcctctgcctcc 545 |||||||||||||||||||| Sbjct: 50650 ctcccagctcctctgcctcc 50631
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gcggcgcgctcccggacgcgctcc 464 |||||| ||||||||||||||||| Sbjct: 89412 gcggcgagctcccggacgcgctcc 89389
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 cgccgctgctgctcgcggcggcgc 146 ||||||||| |||||||||||||| Sbjct: 2285060 cgccgctgccgctcgcggcggcgc 2285037
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 16252811 cctggcgctgccggtggtgg 16252830
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 cccagctcctctgcctcccc 547 |||||||||||||||||||| Sbjct: 121732 cccagctcctctgcctcccc 121751
>dbj|D83402.2| Homo sapiens PTGIS(CYP8) gene for prostacyclin synthase, complete cds Length = 10711 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acatatgctacaacacaaat 20 |||||||||||||||||||| Sbjct: 10549 acatatgctacaacacaaat 10568
>gb|AE004572.1| Pseudomonas aeruginosa PAO1, section 133 of 529 of the complete genome Length = 10238 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ggcgtcgccgctgctgctcg 137 |||||||||||||||||||| Sbjct: 2245 ggcgtcgccgctgctgctcg 2264
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ggcgttcctggcgctgccggtggtggcg 121 ||||| ||||||||||||| |||||||| Sbjct: 66108 ggcgtacctggcgctgccgatggtggcg 66081
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ggcgttcctggcgctgccggtggtggcg 121 ||||| ||||||||||||| |||||||| Sbjct: 115595 ggcgtacctggcgctgccgatggtggcg 115568
>gb|AF164027.1|AF164027 Leishmania tropica surface antigen P2 (PSA-2) gene, complete cds Length = 1881 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 ggcgacatcgccggcacgctgccg 382 ||||||||| |||||||||||||| Sbjct: 646 ggcgacatcaccggcacgctgccg 669
>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 91 cgctgctgctcgcggcggcg 110
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 gccggtgggggcgccgccggcgac 171 ||||||| |||||||||||||||| Sbjct: 3033527 gccggtgagggcgccgccggcgac 3033504
>emb|Y14327.1|SEY14327 Saccharopolyspora erythraea partial ermE and eryBIII genes and eryB gene Length = 2760 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aggcgctgaagaaggccatc 229 |||||||||||||||||||| Sbjct: 1649 aggcgctgaagaaggccatc 1630
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full insert sequence Length = 1347 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 120 cgctgctgctcgcggcggcg 139
>dbj|AK102052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082B20, full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 ggcgttcctggcgctgccggtggtggcg 121 ||||| ||||||||||||| |||||||| Sbjct: 290 ggcgtacctggcgctgccgatggtggcg 317
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 acgtggcgctgcaggcgctg 217 |||||||||||||||||||| Sbjct: 313392 acgtggcgctgcaggcgctg 313373
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gtggcgtcgccgctgctgctcgcg 139 |||||| ||||||||||||||||| Sbjct: 176820 gtggcggcgccgctgctgctcgcg 176843
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full insert sequence Length = 1348 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 121 cgctgctgctcgcggcggcg 140
>dbj|AK063553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E05, full insert sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 134 cctggcgctgccggtggtgg 153
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 26 cgctgctgctcgcggcggcg 45
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 gtcgacgacggcggcgttcctggc 105 |||||||||||||||||| ||||| Sbjct: 22960 gtcgacgacggcggcgttgctggc 22983
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcagctaccacggcgtctac 298 |||||||||||||||||||| Sbjct: 2857274 gcagctaccacggcgtctac 2857255
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cgctgctgctcgcggcggcg 145 |||||||||||||||||||| Sbjct: 2021075 cgctgctgctcgcggcggcg 2021056
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctggcgctgccggtggtgg 119 |||||||||||||||||||| Sbjct: 16261059 cctggcgctgccggtggtgg 16261078
>emb|AJ580965.1|SHE580965 Suid herpesvirus 1 strain Kaplan UL5 gene, UL4 gene, UL6 gene (partial), UL3.5 gene, UL3 gene and UL2 gene (partial) Length = 5200 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gcggcgcgctcccggacgcgctcc 464 |||||| ||||||||||||||||| Sbjct: 493 gcggcgagctcccggacgcgctcc 470
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 tcgccgctgctgctcgcggcggcg 145 ||||||||||||||| |||||||| Sbjct: 104984 tcgccgctgctgctcccggcggcg 105007
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 agaacatgaccaacaactgg 262 |||||||||||||||||||| Sbjct: 1499771 agaacatgaccaacaactgg 1499790
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 cggcggcgttcctggcgctgccgg 113 |||||| ||||||||||||||||| Sbjct: 319801 cggcggagttcctggcgctgccgg 319824
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gcgttcctggcgctgccggt 114 |||||||||||||||||||| Sbjct: 2093894 gcgttcctggcgctgccggt 2093913
>gb|M38342.1|PPTKBG31 Poa pratensis pollen allergen (KBG 31) mRNA, complete cds Length = 1322 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gcgctgaagaaggccatcac 231 |||||||||||||||||||| Sbjct: 988 gcgctgaagaaggccatcac 1007
>gb|L20708.1|SH1UL45A Pseudorabies virus helicase (UL5) and UL4 genes, complete cds Length = 3400 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gcggcgcgctcccggacgcgctcc 464 |||||| ||||||||||||||||| Sbjct: 329 gcggcgagctcccggacgcgctcc 306
>gb|AF456475.1| Mycobacterium ulcerans heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283
>gb|AF456474.1| Mycobacterium marinum isolate S4 heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283
>gb|AF456471.1| Mycobacterium marinum strain hellenicum DL045 heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283
>gb|AF456470.1| Mycobacterium marinum strain ATCC 927 heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283
>gb|AF456469.1| Mycobacterium marinum strain cyprinum CC240299 heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283
>gb|AF456468.1| Mycobacterium marinum strain eilaticum DL240490 heat shock protein 65 (hsp65) gene, partial cds Length = 1648 Score = 40.1 bits (20), Expect = 8.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 109 gccggtggtggcgtcgccgctgctgctcgcgg 140 |||||||||||||||||| ||||||| ||||| Sbjct: 1253 gccggtggtggcgtcgcc-ctgctgcacgcgg 1283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,159,736 Number of Sequences: 3902068 Number of extensions: 5159736 Number of successful extensions: 134793 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 126382 Number of HSP's gapped (non-prelim): 8395 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
