ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart30a02 |
|---|---|
| Clone Library Name | barley_pub |
>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 253 Score = 181 bits (459), Expect = 1e-45 Identities = 83/112 (74%), Positives = 93/112 (83%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 KTF IYRW+PD P+ KPHL++YKVDL DCGPMVLDALLKIKNEQD +LTFRRSCREGICG Sbjct: 21 KTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGICG 80 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI G N LACL KI + + + I PLPHMF+VKDLV D+T FY QYK Sbjct: 81 SCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYK 132
>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 266 Score = 177 bits (450), Expect = 1e-44 Identities = 81/112 (72%), Positives = 92/112 (82%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 KTF +YRW+PD PS KPHL+ Y+VDL+DCGPMVLDALLKIK+EQD +LTFRRSCREGICG Sbjct: 34 KTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICG 93 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI G N LAC+ KI + I PLPHMF+VKDLV D+TNFY QYK Sbjct: 94 SCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYK 145
>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 283 Score = 173 bits (439), Expect = 3e-43 Identities = 79/112 (70%), Positives = 91/112 (81%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K FSIYRW+PD PS KP L+ Y +DL CGPMVLDAL+KIKNE DP+LTFRRSCREGICG Sbjct: 52 KEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRRSCREGICG 111 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNIDG N LACL +I+ E + I PLPHM+++KDLV DMT+FY QYK Sbjct: 112 SCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYK 163
>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 261 Score = 173 bits (439), Expect = 3e-43 Identities = 80/112 (71%), Positives = 92/112 (82%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K+F IYRW+PD+P+ KP +++YKVDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG Sbjct: 29 KSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 88 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI G N LACL KI I PLPHM+VVKDLV D+TNFY QYK Sbjct: 89 SCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYK 140
>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 166 bits (420), Expect = 4e-41 Identities = 76/113 (67%), Positives = 91/113 (80%) Frame = +2 Query: 230 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 409 TKTF IYRW+PD P+ KP ++ Y +DL+ GPM+LDAL++IKNE DP+LTFRRSCREGIC Sbjct: 63 TKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGIC 122 Query: 410 GSCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 GSCAMNIDG N LACL +I ++ A + I PLPH +VVKDLV DMT FY QYK Sbjct: 123 GSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYK 175
>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 280 Score = 165 bits (417), Expect = 1e-40 Identities = 75/112 (66%), Positives = 89/112 (79%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K F+IYRWDPD KPH++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG Sbjct: 40 KKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 99 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI+G N LAC +I + S I PLPHM+V+KDLV D++NFY QYK Sbjct: 100 SCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYK 151
>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 165 bits (417), Expect = 1e-40 Identities = 73/112 (65%), Positives = 90/112 (80%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K F IYRW+PD+ KP+++ Y+VDL +CGPMVLDAL+KIKNE DP+LTFRRSCREGICG Sbjct: 47 KKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICG 106 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI G N LAC++KI + + + PLPHM+VV+DLV DM NFY QY+ Sbjct: 107 SCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYR 158
>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 282 Score = 164 bits (414), Expect = 2e-40 Identities = 74/112 (66%), Positives = 90/112 (80%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K F+IYRWDPD KP ++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG Sbjct: 42 KKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 101 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI+G N LAC +I ++ + S I PLPHM+V+KDLV D++NFY QYK Sbjct: 102 SCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYK 153
>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 252 Score = 163 bits (412), Expect = 4e-40 Identities = 76/112 (67%), Positives = 88/112 (78%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 KTF IYRW+P+ P KP L+ Y VDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG Sbjct: 22 KTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 81 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNI+G N LAC+ I + + I PLPH F+VKDLV D+T FY QYK Sbjct: 82 SCAMNINGSNTLACICNIKKDNK-PTKIYPLPHCFIVKDLVPDLTYFYKQYK 132
>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 295 Score = 160 bits (404), Expect = 3e-39 Identities = 75/112 (66%), Positives = 88/112 (78%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K F IYRW+PD PS KP L+ Y +DL+ GPMVLDAL+KIKNE DP+LTFRRSCREGICG Sbjct: 53 KQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCREGICG 112 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNIDG N LACL +I + + I PLPHM++VKDLV D+T FY QY+ Sbjct: 113 SCAMNIDGVNTLACLCRIDKQ--NDTKIYPLPHMYIVKDLVPDLTQFYKQYR 162
>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur| protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP subunit of complex II) Length = 298 Score = 158 bits (399), Expect = 1e-38 Identities = 73/111 (65%), Positives = 88/111 (79%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 KTF IYR++P++P KP ++ + VDL CG M+LDAL+KIKNE DP+LTFRRSCREGICG Sbjct: 54 KTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICG 113 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQY 565 SCAMNI G N LAC+ KI S+ + ++ I PLPHMFVVKDLV DM FY QY Sbjct: 114 SCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQY 164
>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 239 Score = 153 bits (386), Expect = 4e-37 Identities = 71/110 (64%), Positives = 84/110 (76%) Frame = +2 Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC 418 F +YRW+PD KPH+ Y VDL+ CGPMVLDAL+KIKNEQD +LTFRRSCREG+CGSC Sbjct: 11 FKVYRWNPDKKE-KPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSC 69 Query: 419 AMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 AMNIDG N LAC+ I + I PLPHM ++KDLV D++NFY QYK Sbjct: 70 AMNIDGTNTLACIKSIDTNKK-EMKIYPLPHMHIIKDLVPDLSNFYAQYK 118
>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 259 Score = 145 bits (366), Expect = 8e-35 Identities = 72/111 (64%), Positives = 84/111 (75%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 + F+IYRWDPD+ P + Y VD+ CGPMVLDAL+KIKNE DP+LTFRRSCREGICG Sbjct: 28 RRFNIYRWDPDT-GENPRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQY 565 SCAMNIDG N LAC+ + E G I PLPHM VVKDLV D+T+FY Q+ Sbjct: 87 SCAMNIDGGNHLACIYGM-DEIKGDVNIYPLPHMPVVKDLVPDLTHFYAQH 136
>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 239 Score = 135 bits (341), Expect = 6e-32 Identities = 66/112 (58%), Positives = 82/112 (73%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K IYRW P S + + + S+CGPM+LDAL+KIK+EQD SL FRRSCREGICG Sbjct: 11 KFIRIYRWTP-SNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCREGICG 69 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SC+MNIDG N LACL I + A TI PLPHM+++KDLV D++NF++QYK Sbjct: 70 SCSMNIDGINTLACLKPIKTN-ANIITIYPLPHMYIIKDLVPDLSNFFSQYK 120
>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 135 bits (341), Expect = 6e-32 Identities = 68/112 (60%), Positives = 83/112 (74%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 + IYR+DPD P + +++DLS GPM+LDAL+KIKNE D +LTFRRSCREGICG Sbjct: 28 RKIKIYRYDPDLDKN-PTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICG 86 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCAMNIDG N LAC+ I + +G I PLPHM VVKDLV DM++FY QY+ Sbjct: 87 SCAMNIDGTNTLACIKPI-EDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYE 137
>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 135 bits (340), Expect = 8e-32 Identities = 68/108 (62%), Positives = 82/108 (75%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 +YR+DPD P + +++DLS GPMVLDAL+KIKNE D +LTFRRSCREGICGSCAM Sbjct: 32 VYRYDPDLDEN-PTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAM 90 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 NIDG N LAC+ I + +G I PLPHM VVKDLV DM++FY QY+ Sbjct: 91 NIDGTNTLACIKPI-EDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYE 137
>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 250 Score = 135 bits (339), Expect = 1e-31 Identities = 63/112 (56%), Positives = 84/112 (75%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K IYRW+P+ + P + + ++CGPM+LDAL++IKN QD SLTFRRSCREGICG Sbjct: 21 KFIRIYRWNPNL-NLNPWFSIFPISTNNCGPMILDALIQIKNIQDSSLTFRRSCREGICG 79 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SC+MNIDG N LACL ++++ + TI PLPH +++KDLV D++NFY QYK Sbjct: 80 SCSMNIDGTNSLACLRSLNTK-SNFITIYPLPHTYIIKDLVPDLSNFYAQYK 130
>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (IP) Length = 262 Score = 133 bits (334), Expect = 4e-31 Identities = 65/112 (58%), Positives = 82/112 (73%) Frame = +2 Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 K I+RWD S P Y V L +CGP+VLDAL+KIKNE D +++FRRSCREGICG Sbjct: 21 KLIKIFRWD-SSEKKDPWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGICG 79 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 SCA+NI+G N LACL K++ + + PLPH+FV+KDLVVD+TNFY QY+ Sbjct: 80 SCAININGTNSLACLQKLNIK-NNIIYVYPLPHIFVLKDLVVDLTNFYAQYR 130
>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 238 Score = 107 bits (268), Expect = 2e-23 Identities = 57/113 (50%), Positives = 81/113 (71%), Gaps = 3/113 (2%) Frame = +2 Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 415 FSIYR++PD P ++DY ++ + M+L DAL+++K E+DPSL+FRRSCREG+CGS Sbjct: 5 FSIYRYNPDVDDA-PRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62 Query: 416 CAMNIDGDNGLACLTKIS--SEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 +N++G NGLAC+T IS ++ I PLP + V++DLVVDM FY QY+ Sbjct: 63 DGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYE 115
>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 238 Score = 107 bits (266), Expect = 3e-23 Identities = 57/113 (50%), Positives = 82/113 (72%), Gaps = 3/113 (2%) Frame = +2 Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 415 FSIYR++PD + P ++DY ++ + M+L DAL+++K E+DPSL+FRRSCREG+CGS Sbjct: 5 FSIYRYNPDVDNA-PRMQDYTLEGEEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62 Query: 416 CAMNIDGDNGLACLTKIS--SEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 +N++G NGLAC+T IS ++ I PLP + V++DLVVDM FY QY+ Sbjct: 63 DGLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYE 115
>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 235 Score = 95.5 bits (236), Expect = 9e-20 Identities = 49/112 (43%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Frame = +2 Query: 236 TFSIYRWDPDSPSTKPHLKDYKVDLSDC-GPMVLDALLKIKNEQDPSLTFRRSCREGICG 412 TFSI R++P++ KP+++D+++D+S G M+L+AL ++ E+ P + RRSC EG+CG Sbjct: 2 TFSIMRFNPETDK-KPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCG 59 Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 S MNI+G N LAC+T++ + + PLP +++DL+VDM FY QYK Sbjct: 60 SDGMNINGKNALACVTQL-KDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYK 110
>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 239 Score = 83.6 bits (205), Expect = 4e-16 Identities = 42/108 (38%), Positives = 61/108 (56%) Frame = +2 Query: 236 TFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGS 415 T ++++DP S +KPH ++YK++ + + + L I+ DP L F CR GICGS Sbjct: 6 TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIFI-VLNMIRETYDPDLNFDFVCRAGICGS 64 Query: 416 CAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYN 559 C M I+G LAC T G T+ PLP ++KDL VD N++N Sbjct: 65 CGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNWFN 112
>FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 245 Score = 81.6 bits (200), Expect = 1e-15 Identities = 41/104 (39%), Positives = 64/104 (61%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + ++DP S +KPH K+Y++ + + + AL I+ QDP L+F CR GICGSCAM Sbjct: 12 VLKFDPQSAVSKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFY 556 ++G LAC T SS +G T+ P+P ++KDL V+ +++ Sbjct: 71 MVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWF 114
>FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 245 Score = 80.5 bits (197), Expect = 3e-15 Identities = 41/105 (39%), Positives = 63/105 (60%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + ++DP S KPH K+Y++ + + + AL I+ QDP L+F CR GICGSCAM Sbjct: 12 VLKFDPQSAVNKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYN 559 ++G LAC T SS G T+ P+P ++KDL V+ ++++ Sbjct: 71 MVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFS 115
>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 247 Score = 71.6 bits (174), Expect = 1e-12 Identities = 42/103 (40%), Positives = 62/103 (60%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R+ P+ S P + Y+V L+ VLD L IK+ D +L+FR SCR GICGS M Sbjct: 9 VSRYRPEIESA-PTFQAYEVPLTREWA-VLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 I+GD LAC T ++ G + P+ + V++DLVVD+++F Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDF 109
>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 256 Score = 70.9 bits (172), Expect = 2e-12 Identities = 41/103 (39%), Positives = 64/103 (62%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P+ +PHL Y+V D +LDAL IK++ +PSL++R SCR ICGSC M Sbjct: 11 VLRYNPEIDQ-EPHLSTYQVPY-DNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + + +G I PL + + +DLVVD+++F Sbjct: 69 MVNNKPKLACKTFL-RDYSGHMRIEPLANFPIERDLVVDLSHF 110
>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P+ T PH Y+V D +LDAL IK+ P L++R SCR ICGSC M Sbjct: 10 VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + G + L + + +DLVVDMT+F Sbjct: 68 MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109
>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P+ T PH Y+V D +LDAL IK+ P L++R SCR ICGSC M Sbjct: 10 VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + G + L + + +DLVVDMT+F Sbjct: 68 MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109
>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P+ T PH Y+V D +LDAL IK+ P L++R SCR ICGSC M Sbjct: 10 VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + G + L + + +DLVVDMT+F Sbjct: 68 MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109
>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 243 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P+ T PH Y+V D +LDAL IK+ P L++R SCR ICGSC M Sbjct: 10 VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + G + L + + +DLVVDMT+F Sbjct: 68 MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109
>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 244 Score = 61.2 bits (147), Expect = 2e-09 Identities = 40/103 (38%), Positives = 56/103 (54%) Frame = +2 Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424 + R++P++ PH Y V + +LDAL IK+ P L++R SCR ICGSC M Sbjct: 11 VMRYNPETDDA-PHFVTYDVPYDE-QTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68 Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553 ++ LAC T + G I L + V +DLVVDMT+F Sbjct: 69 MVNRVPKLACKTFMRDYPNGV-RIEALGNFPVERDLVVDMTHF 110
>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092| Length = 489 Score = 60.5 bits (145), Expect = 3e-09 Identities = 35/95 (36%), Positives = 52/95 (54%) Frame = +2 Query: 278 KPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACL 457 K +L+ Y+V + VL+AL I + ++ FR SCR CGSCA+ I+G+ LAC Sbjct: 13 KEYLESYEVPENIT---VLEALEYINKHYEANILFRASCRNAQCGSCAVTINGEPRLACE 69 Query: 458 TKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQ 562 TK+ I PL V++DL+VD +Y + Sbjct: 70 TKVED----GMIIEPLRGFKVIRDLIVDREPYYKK 100
>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067| Length = 494 Score = 57.4 bits (137), Expect = 3e-08 Identities = 32/81 (39%), Positives = 43/81 (53%) Frame = +2 Query: 320 GPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGASTIS 499 G +LDAL I ++ FR SC+ G CGSCA+ I+ + LAC TK+ I Sbjct: 22 GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVEDN----MIIE 77 Query: 500 PLPHMFVVKDLVVDMTNFYNQ 562 PL V+ DLVVD +Y + Sbjct: 78 PLEGFDVISDLVVDREPYYKK 98
>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) (Fragment) Length = 143 Score = 54.3 bits (129), Expect = 2e-07 Identities = 24/45 (53%), Positives = 31/45 (68%) Frame = +2 Query: 434 GDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYK 568 G N LAC +I + S I PLPHM+V+KDLV D++NFY QY+ Sbjct: 1 GGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYR 45
>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 252 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/75 (28%), Positives = 40/75 (53%) Frame = +2 Query: 344 LKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVV 523 + +K E+ +T+ +C E +CG+C+M I+G +C T + + + P+ VV Sbjct: 47 VNVKGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSC-TALIDQLEQPIRLKPMKTFPVV 105 Query: 524 KDLVVDMTNFYNQYK 568 +DL VD + ++ K Sbjct: 106 RDLQVDRSRMFDSLK 120
>MOP_DESGI (Q46509) Aldehyde oxidoreductase (EC 1.2.99.7) (Molybdenum iron| sulfur protein) Length = 907 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +2 Query: 335 DALLKIKNEQDPSLT-FRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGA 487 +ALL Q LT + C +G CG+C++ +DG AC+TK+ A GA Sbjct: 20 EALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGA 71
>IORA_BREDI (Q51697) Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)| Length = 152 Score = 32.0 bits (71), Expect = 1.3 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 Query: 392 CREGICGSCAMNIDGDNGLACLTKISSEAAGAST 493 C G+CG+C ++I+G+ +C+T +S A + T Sbjct: 39 CGLGLCGACTVHINGEAARSCITPLSVVARQSVT 72
>PYRK_PYRAB (Q9UXV5) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 247 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%) Frame = +2 Query: 299 KVDLSD---CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 424 KV+ S CGP V+ A +L+I N + ++ R C GICGSCA+ Sbjct: 163 KVEFSQVYACGPEVMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 30.4 bits (67), Expect = 3.7 Identities = 25/88 (28%), Positives = 28/88 (31%) Frame = +1 Query: 280 APPQGLQGGPLRLRPHGARRAPQDQERAGPVPHLPPELPXXXXXXXXXXXXXXXXXXXPH 459 APP G G P PH ++ Q Q+ P P PP P PH Sbjct: 211 APPAGPTGLPPPTPPHHLQQQQQQQQHPAPPP--PPYFP------AAALAALAGSPAGPH 262 Query: 460 QDLLGGGRCLHDLAAPAHVRRQGPRRRH 543 L GG L P H P H Sbjct: 263 PGLYPGG----GLRFPPHHPGAHPHAHH 286
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 11/49 (22%) Frame = +1 Query: 283 PPQGLQG-----------GPLRLRPHGARRAPQDQERAGPVPHLPPELP 396 PP G++G GP R P+G +R P R P P +PP P Sbjct: 369 PPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGP 417
>PYRK_PYRKO (Q5JJ90) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 233 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Frame = +2 Query: 317 CGPM-VLDALLKIKNEQDPSLTFRR--SCREGICGSC 418 CGP +L A+LK+ N ++ ++ R C G+CGSC Sbjct: 174 CGPEPMLKAVLKVMNYKNVQISAERYMKCGIGVCGSC 210
>CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (Cx44)| Length = 412 Score = 30.0 bits (66), Expect = 4.8 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = +1 Query: 268 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVP----HLPPELP 396 P PP GGP + P GA + D + G V H PPE P Sbjct: 342 PPASTPPAAPAGGPQQFLPGGAAGSSGDSDGEGAVTAVELHAPPEPP 388
>PYRK_PYRHO (O57738) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 247 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +2 Query: 317 CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 424 CGP ++ A +L+I N + ++ R C GICGSCA+ Sbjct: 172 CGPEIMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210
>PYRK_METJA (Q58841) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 257 Score = 29.6 bits (65), Expect = 6.3 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%) Frame = +2 Query: 278 KPHLKDYKVDLS-DCGP-MVLDALLKIKNEQD----PSLTFRRSCREGICGSCAMNIDG 436 K LK+ K DL CGP +++ +++I NE + S+ C GICG C ++ +G Sbjct: 164 KEVLKEEKFDLIITCGPEIMMKKVVEIANEYNIPVQVSMERYMKCGIGICGQCCVDDEG 222
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 268 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVPHLPPELP 396 P D PQG+Q P P G + P Q +GP H+ P+ P Sbjct: 668 PQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710
>XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (EC 1.17.1.4)| (XDHase subunit E) Length = 173 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 389 SCREGICGSCAMNIDGDNGLACLT 460 SC G CG+C++ IDG AC+T Sbjct: 51 SCGIGRCGACSILIDGKLANACMT 74
>ASCD_YERPS (Q66DP5) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase| reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase) (EC 1.17.1.-) (E3) Length = 328 Score = 29.3 bits (64), Expect = 8.2 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +2 Query: 311 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGDNGLACLTKISSEAAGA 487 SD +LDA L D ++ SC++G CGSC A+ I G+ A T ++ E Sbjct: 15 SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGEVDSAENTFLTEEDVAK 68 Query: 488 STI 496 I Sbjct: 69 GAI 71
>ASCD_YERPE (P68641) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase| reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase) (EC 1.17.1.-) (E3) Length = 328 Score = 29.3 bits (64), Expect = 8.2 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +2 Query: 311 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGDNGLACLTKISSEAAGA 487 SD +LDA L D ++ SC++G CGSC A+ I G+ A T ++ E Sbjct: 15 SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGEVDSAENTFLTEEDVAK 68 Query: 488 STI 496 I Sbjct: 69 GAI 71
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +1 Query: 268 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 396 P+ PP G R P + R+ D R+GP P LPP+ P Sbjct: 362 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 407
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +1 Query: 268 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 396 P+ PP G R P + R+ D R+GP P LPP+ P Sbjct: 368 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 413 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,684,913 Number of Sequences: 219361 Number of extensions: 655920 Number of successful extensions: 2978 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2760 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2943 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
