ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29h11 |
|---|---|
| Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 221 bits (563), Expect = 9e-58 Identities = 112/123 (91%), Positives = 119/123 (96%) Frame = +3 Query: 141 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 320 AIKRTKAEKK+AYD+KLCQLL+EYTKVLIAVADNVGS QLQEIRKGLRGDSIVLMGKNTL Sbjct: 1 AIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL 60 Query: 321 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAP 500 IRRCIKVH++ TGNK+FLEL LLVGNVGLIFTKGDLKEVREEVAK+KVGAPARVGLVAP Sbjct: 61 IRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAP 120 Query: 501 VDV 509 VDV Sbjct: 121 VDV 123
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 211 bits (536), Expect = 1e-54 Identities = 107/123 (86%), Positives = 117/123 (95%) Frame = +3 Query: 141 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 320 AIKRTKAEKKIAYD+KLC LL+EYTKVLIA+ADNVGSKQLQ+IR+GLRGDS+VLMGKNTL Sbjct: 1 AIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTL 60 Query: 321 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAP 500 IRRCIKV++EKTGN F L +LLVGNVGLIFTKGDLKEVREEVAK+KVGAPARVGLVAP Sbjct: 61 IRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAP 120 Query: 501 VDV 509 VDV Sbjct: 121 VDV 123
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 191 bits (485), Expect = 1e-48 Identities = 92/124 (74%), Positives = 109/124 (87%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 317 MA+K TKAEKKI YD KLCQLL EY+++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60 Query: 318 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 +++R +++H++KTGN+ FL L LL GNVGLIFTKGDLKEV EEVAK+KVGAPARVGLVA Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120 Query: 498 PVDV 509 P+DV Sbjct: 121 PIDV 124
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 188 bits (477), Expect = 8e-48 Identities = 92/124 (74%), Positives = 109/124 (87%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 317 MA K+TKAEKKIAYD KLC L+EEY ++L+ +DNVGS QLQ IRKGLRGDS+VLMGKNT Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60 Query: 318 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 +++R +++H+EKTGN +L L LLVGNVGLIFTKGDLKEV EEVAK+KVGAPARVGLVA Sbjct: 61 MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120 Query: 498 PVDV 509 P+DV Sbjct: 121 PIDV 124
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 187 bits (476), Expect = 1e-47 Identities = 91/122 (74%), Positives = 106/122 (86%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 +K TKAEKKIAYD KLCQL++EYT++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT++ Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 +R +++HSE TGN L L LL GNVGLIFTKGDLKEV EEVAK+KVGAPARVGLVAP+ Sbjct: 62 KRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121 Query: 504 DV 509 DV Sbjct: 122 DV 123
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 186 bits (473), Expect = 2e-47 Identities = 92/124 (74%), Positives = 109/124 (87%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 317 MA K TKAEKKI YD KLCQLL+EYT++L+ ADNVGSKQLQ IR+GLRGDS+VLMGKNT Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60 Query: 318 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 +++R +++H+EKTGN+ FL L LL+GNVGLIFTKG LKEV EEVAK+KVGAPA VGLVA Sbjct: 61 MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVA 120 Query: 498 PVDV 509 P+DV Sbjct: 121 PIDV 124
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 186 bits (472), Expect = 3e-47 Identities = 90/122 (73%), Positives = 106/122 (86%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 +K TKAEKKIAYD KLCQL++EYT++L+ ADNVGS QLQ IRKGLRGDS+VLMGKNT++ Sbjct: 2 VKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 61 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 +R +++HSE +GN L L LL GNVGLIFTKGDLKEV EEVAK+KVGAPARVGLVAP+ Sbjct: 62 KRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 121 Query: 504 DV 509 DV Sbjct: 122 DV 123
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 182 bits (461), Expect = 6e-46 Identities = 89/124 (71%), Positives = 108/124 (87%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 317 MA+K TKAEKKIAYDQKLCQLL+EY++VLIA ADNVGS QLQ IR GLRGDSIVLMGKNT Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNT 60 Query: 318 LIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 +++R I++H+E TGN++ + L + NVGLIFTKGDL +VREE++K+KVGAPAR GLVA Sbjct: 61 MMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVA 120 Query: 498 PVDV 509 P+DV Sbjct: 121 PIDV 124
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 114 bits (285), Expect = 2e-25 Identities = 57/118 (48%), Positives = 78/118 (66%) Frame = +3 Query: 156 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 335 K+ K Y KL LLE+Y + I DNV S+Q+ EIR+ LRG+++VLMGKNT++RR + Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRAL 63 Query: 336 KVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 K T ++ L + GNVG +FT GDLKEVR+++ +KV APAR G +AP DV Sbjct: 64 KTFVADT--PEYERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADV 119
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 113 bits (282), Expect = 3e-25 Identities = 60/122 (49%), Positives = 80/122 (65%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 ++ KA K Y K+ +L +EY K I ADNVGSKQ+Q IR LRG +VLMGKNT++ Sbjct: 2 VRENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMM 61 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 R+ I+ H E N +L + GNVG +FTKGDL EVR+++ + KV APAR G +AP+ Sbjct: 62 RKAIRGHLE--NNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPL 119 Query: 504 DV 509 V Sbjct: 120 PV 121
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 112 bits (279), Expect = 8e-25 Identities = 57/118 (48%), Positives = 76/118 (64%) Frame = +3 Query: 156 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 335 K+ K Y KL LLEEY + I DNV S+Q+ EIR+ LR +VLMGKNT++RR + Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRAL 63 Query: 336 KVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 K + ++ L + GNVG +FT GDLKE+R+++ +KV APAR G VAPVDV Sbjct: 64 KTF--LVDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDV 119
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 110 bits (276), Expect = 2e-24 Identities = 59/122 (48%), Positives = 81/122 (66%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 ++ KA K Y K+ +L +E+ K I ADNVGSKQ+Q IR LRG ++VLMGKNT++ Sbjct: 2 VRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMM 61 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 R+ I+ H E N +L + GNVG +FTKGDL EVR+++ + KV APAR G +AP+ Sbjct: 62 RKAIRGHLE--NNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPL 119 Query: 504 DV 509 V Sbjct: 120 HV 121
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 108 bits (269), Expect = 1e-23 Identities = 55/122 (45%), Positives = 81/122 (66%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 ++ ++ K Y KL +L EEY K L+ DNVGSKQ+QEIR+ +RG + +LMGKNT+I Sbjct: 1 VREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMI 60 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 R+ ++ H K N +L +V NVG +FTK DL E+R ++ +++ GAPA+ G +AP Sbjct: 61 RKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPC 118 Query: 504 DV 509 DV Sbjct: 119 DV 120
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 108 bits (269), Expect = 1e-23 Identities = 59/121 (48%), Positives = 79/121 (65%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL EVR+ + +KV A AR G +AP D Sbjct: 63 KAIRGHLE--NNSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCD 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 107 bits (267), Expect = 2e-23 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K + ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL E+R+ + +KV A AR G +AP D Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 105 bits (262), Expect = 7e-23 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL E+R+ + +KV A AR G +AP + Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 105 bits (262), Expect = 7e-23 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL E+R+ + +KV A AR G +AP + Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 105 bits (262), Expect = 7e-23 Identities = 57/121 (47%), Positives = 79/121 (65%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL E+R+ + +KV A AR G +AP + Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 104 bits (259), Expect = 2e-22 Identities = 56/114 (49%), Positives = 76/114 (66%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 347 K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R+ I+ H Sbjct: 1 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 60 Query: 348 EKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 E N +L + GNVG +FTK DL E+R+ + +KV A AR G +AP +V Sbjct: 61 E--NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEV 112
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 103 bits (258), Expect = 2e-22 Identities = 59/121 (48%), Positives = 77/121 (63%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL +Y K I ADNVGSKQ+Q IR LRG +IVLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N +L + GNVG +FTK DL EVR+ + +KV A AR G +AP + Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCE 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 102 bits (253), Expect = 8e-22 Identities = 57/121 (47%), Positives = 77/121 (63%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL+++ K I ADNVGSKQ+Q IR LRG ++VLMGKNT++R Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 + I+ H E N L + GNVG +FTK DL EVR+ + +KV A AR G +AP + Sbjct: 63 KAIRGHLE--NNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120 Query: 507 V 509 V Sbjct: 121 V 121
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 97.4 bits (241), Expect = 2e-20 Identities = 51/116 (43%), Positives = 72/116 (62%) Frame = +3 Query: 162 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 341 EKK Y KL + LEEY + + DNV S+Q+ E+RK LRG ++VLMGKNT++RR I+ Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR- 64 Query: 342 HSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 + DF +L + G VG +FT L E++ + ++V APAR G VAP D+ Sbjct: 65 -GFLSDLPDFEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDI 119
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 96.7 bits (239), Expect = 3e-20 Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 K +K +KK Y +KL L+++Y+K+LI DNVGS Q+ +RK LRG + +LMGKNT IR Sbjct: 3 KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGA-PARVGLVAPV 503 +K + + + +L L+ N+G +F K DL E+R + +K + PAR+G++AP+ Sbjct: 63 TALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120 Query: 504 DV 509 DV Sbjct: 121 DV 122
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 93.6 bits (231), Expect = 3e-19 Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 3/127 (2%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNT 317 MAI + E K Y +KL L E+Y + + DNV S+Q+ +RK LRG + ++MGKNT Sbjct: 1 MAISK---ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNT 57 Query: 318 LIRRCIKVHSEKTGNKDFLELSNLLV---GNVGLIFTKGDLKEVREEVAKHKVGAPARVG 488 +IRR ++ D EL LL GNVG +FT DLKEVRE + + + APAR Sbjct: 58 MIRRAMRGII-----NDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPN 112 Query: 489 LVAPVDV 509 +AP+DV Sbjct: 113 AIAPLDV 119
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 88.2 bits (217), Expect = 1e-17 Identities = 53/117 (45%), Positives = 70/117 (59%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 A K+ Y +L QL+ E+ +VL+ AD+VGSKQL IR LRG + VLMGKNT IR ++ Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALR 65 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 ++ L L+ NVG IF + D VR V +HKV APA+ G+ AP DV Sbjct: 66 QQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDV 120
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 84.7 bits (208), Expect = 1e-16 Identities = 47/117 (40%), Positives = 72/117 (61%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 +++K + +K +L Y K+++A AD VGS QLQ+IRK +RG VLMGK T+IR+ I+ Sbjct: 6 SKRKKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 ++ D L+ L N +IF K ++ EV+ + +VGAPA+ G+ AP DV Sbjct: 66 DLADSKPELD--ALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDV 120
>RLA0_PIG (Q29214) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 93 Score = 79.0 bits (193), Expect = 7e-15 Identities = 43/92 (46%), Positives = 59/92 (64%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 + +A K Y K+ QLL++Y K I ADNVGSKQ+Q+IR LRG ++VLMGKNT++R Sbjct: 3 REDRAPWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMXLRGKAVVLMGKNTMMR 62 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 422 + I+ H E N +L + GNVG +F K Sbjct: 63 KAIRGHLE--NNPALGKLLPQIRGNVGFVFXK 92
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 78.6 bits (192), Expect = 9e-15 Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 7/124 (5%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 +E K Y+++ L +Y +VL + DNV S+Q+ ++R+ LRG ++MGK TL ++ ++ Sbjct: 5 SEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVE 64 Query: 339 VHSEKTGNKDFLEL-------SNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 +E + +L LL GN LIFT ++ + + KH+V APARVG +A Sbjct: 65 RRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIA 124 Query: 498 PVDV 509 P DV Sbjct: 125 PCDV 128
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 76.3 bits (186), Expect = 5e-14 Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 347 K Y+++L L +Y+ VL DNV S+Q+ ++R+G RG + +MGK TL + ++ + Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRA 67 Query: 348 -------EKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 E D E NLL GN GLIFT ++E+ + H+V APARVG + P D Sbjct: 68 QAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCD 126 Query: 507 V 509 V Sbjct: 127 V 127
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 70.9 bits (172), Expect = 2e-12 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 347 K Y+++L L +Y+ VL DNV S+Q+ ++ + LR + +MGK TL + ++ + Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRA 67 Query: 348 -------EKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 E D E NLL GN GLIFT ++E+ + H+V ARVG ++P D Sbjct: 68 QAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCD 127 Query: 507 V 509 V Sbjct: 128 V 128
>RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 64.7 bits (156), Expect = 1e-10 Identities = 40/114 (35%), Positives = 64/114 (56%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 347 KI KL +LL+ V + V ++QLQEIR +RG + M +NTLI R IK + Sbjct: 14 KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVA 73 Query: 348 EKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 E+TGN +F +L++ + +I T + ++ + + + K AP + G VAP D+ Sbjct: 74 EETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDI 127
>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)| Length = 352 Score = 58.2 bits (139), Expect = 1e-08 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Frame = +3 Query: 186 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 365 +L LLE Y V + + SKQLQ++R+GL G + + M +NTL+ R + E+ G Sbjct: 22 ELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAG-- 75 Query: 366 DFLE-LSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 D L+ L+ + G VGL+ T + + +++ K AP G VAP D+ Sbjct: 76 DGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDI 124
>RLA0_METKA (Q8TX50) Acidic ribosomal protein P0 homolog (L10E)| Length = 357 Score = 58.2 bits (139), Expect = 1e-08 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 2/127 (1%) Frame = +3 Query: 135 PMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLR-GDSIVLMGK 311 P + AE K ++L +L++EY V + + + + QLQEIR LR D+I+ M + Sbjct: 10 PSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSR 69 Query: 312 NTLIRRCIKVHSEKTGNKDFLE-LSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVG 488 NTL+R ++ EK + LE L + + G V IFT D ++ + + + K APA+ G Sbjct: 70 NTLMRIALE---EKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPG 126 Query: 489 LVAPVDV 509 +AP D+ Sbjct: 127 DIAPEDI 133
>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)| Length = 336 Score = 57.4 bits (137), Expect = 2e-08 Identities = 34/114 (29%), Positives = 62/114 (54%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHS 347 KI L +LL+ + + V + QLQEIR +R + M +NTLI+R ++ + Sbjct: 14 KIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVA 73 Query: 348 EKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 E+TGN +F +L + L ++ T+ + ++ + + + K AP + G +AP D+ Sbjct: 74 EETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDI 127
>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)| Length = 297 Score = 57.0 bits (136), Expect = 3e-08 Identities = 36/117 (30%), Positives = 61/117 (52%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 A K+ L +LL+ + + V S QLQEIR +R + M +NTL++R I+ Sbjct: 11 ASWKVDEVNSLKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIE 70 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 +E+TGN F +L + + LI T+ + ++ + + + K AP + G AP D+ Sbjct: 71 EVAEETGNPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDI 127
>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)| Length = 350 Score = 56.2 bits (134), Expect = 5e-08 Identities = 35/108 (32%), Positives = 52/108 (48%) Frame = +3 Query: 186 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNK 365 +L +E Y V + + S+QLQ +R+ L G + V M +NTL+ R + N Sbjct: 22 ELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVND 76 Query: 366 DFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 F EL + G V LI T + + +E+ K AP G VAP D+ Sbjct: 77 GFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDI 124
>RLA0_METTH (O27717) Acidic ribosomal protein P0 homolog (L10E)| Length = 336 Score = 55.1 bits (131), Expect = 1e-07 Identities = 38/117 (32%), Positives = 64/117 (54%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 AE K Q+L L++ Y V IA ++ ++QLQ++R+ LR +++ M K TLI ++ Sbjct: 5 AEWKKKEVQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALE 64 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 + N D LS+ + G LIFT + ++ + + K APA+ G +AP D+ Sbjct: 65 KAGRELENVD--SLSDYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPDDI 119
>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 53.1 bits (126), Expect = 4e-07 Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 2/101 (1%) Frame = +3 Query: 213 TKVLIAVAD--NVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLELSN 386 +K ++A+ D +V + QLQEIR +R + M +NTLI R +K +E+ N EL+N Sbjct: 26 SKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELAN 85 Query: 387 LLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 + ++ T + ++ + + ++K AP R G +AP D+ Sbjct: 86 YVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDI 126
>RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)| Length = 340 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/117 (25%), Positives = 62/117 (52%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 AE K ++L +++ Y + + V + L ++R LRG +++ + +NTLI IK Sbjct: 5 AEWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIK 64 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 +++ G + +L + + G ++ T+ + ++ + + + K APA+ G V P DV Sbjct: 65 RAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDV 121
>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic| ribosomal protein P0 homolog) (L10E) (HMal10) Length = 348 Score = 50.4 bits (119), Expect = 3e-06 Identities = 32/107 (29%), Positives = 56/107 (52%) Frame = +3 Query: 189 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 368 + +++E Y V + + S+QLQ++R+ L G + + + +NTL+ R + G +D Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL--DDVDDGLED 80 Query: 369 FLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 L+ + G VGLI T + + +E+ K AP G VAP D+ Sbjct: 81 ---LNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDI 124
>MRT4_YEAST (P33201) mRNA turnover protein 4| Length = 236 Score = 47.8 bits (112), Expect = 2e-05 Identities = 32/119 (26%), Positives = 60/119 (50%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 K+ + K+ +D+ + + L+ Y V + D+V + LQEIR G ++ MGK +++ Sbjct: 17 KKGRENKERIFDE-VREALDTYRYVWVLHLDDVRTPVLQEIRTSWAGSKLI-MGKRKVLQ 74 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPV 503 + + E+ ++ +LS L G GL+FT D+ V+E + +R AP+ Sbjct: 75 KALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNTKAPL 133
>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)| Length = 339 Score = 46.2 bits (108), Expect = 5e-05 Identities = 32/123 (26%), Positives = 63/123 (51%) Frame = +3 Query: 141 AIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTL 320 A++ + E K+ +++ +++ V I NV + Q+Q+IR+ RG + + + KNTL Sbjct: 3 AVRGSPPEYKVRAVEEIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTL 62 Query: 321 IRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAP 500 + R + + G D+L+L + L + +I + + + KV +P + V+P Sbjct: 63 LERAL----DALGG-DYLKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSP 117 Query: 501 VDV 509 VDV Sbjct: 118 VDV 120
>MRT4_NEUCR (Q7S302) mRNA turnover protein 4 homolog| Length = 252 Score = 45.4 bits (106), Expect = 9e-05 Identities = 32/118 (27%), Positives = 52/118 (44%) Frame = +3 Query: 144 IKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLI 323 + + E+K + + + + Y + DN+ + L+++RK L D + GK L Sbjct: 15 VTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN-DCRIFFGKTKLT 73 Query: 324 RRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVA 497 R + E +LS L G+VGLIFT D E+++ AR G VA Sbjct: 74 ARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVA 131
>MRT4_CANGA (Q6FJ04) mRNA turnover protein 4 homolog| Length = 239 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/100 (28%), Positives = 53/100 (53%) Frame = +3 Query: 147 KRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIR 326 K+ + K+ +D+ + + L+ Y V + D+V + LQEIR+ G + LMGK ++ Sbjct: 17 KKGRENKERIFDE-VREALDTYKYVFVLQLDDVRTPVLQEIREAWVGSKL-LMGKRKVLE 74 Query: 327 RCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVRE 446 + + E+ ++ +L+ G +GL+FT L V+E Sbjct: 75 KALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKE 114
>RLA0_SULTO (Q971J2) Acidic ribosomal protein P0 homolog (L10E)| Length = 337 Score = 42.7 bits (99), Expect = 6e-04 Identities = 37/128 (28%), Positives = 62/128 (48%) Frame = +3 Query: 126 VAAPMAIKRTKAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLM 305 + A + +R A+ KI ++L Q L EY ++IA + + +L +IRK +RG + + + Sbjct: 3 IMAVITQERKIAKWKIEEVKELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKV 62 Query: 306 GKNTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARV 485 KNTL + K D +L L G IFT + E++ ++K K+ A Sbjct: 63 TKNTLFG-----IAAKNAGLDVSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMP 117 Query: 486 GLVAPVDV 509 G A +V Sbjct: 118 GDKADEEV 125
>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 338 Score = 41.2 bits (95), Expect = 0.002 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Frame = +3 Query: 138 MAIKRTK-AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKN 314 +A+K+ K A K+ ++L +L++ +LI + + +L EIRK LRG + + + KN Sbjct: 6 LALKQRKVASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKN 65 Query: 315 TLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTK 422 TL + + K D +L L G IFTK Sbjct: 66 TLFK-----IAAKNAGIDIEKLEQYLTGPNVFIFTK 96
>RL10_SYNSC (Q3AGT1) 50S ribosomal protein L10| Length = 175 Score = 39.3 bits (90), Expect = 0.006 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Frame = +3 Query: 186 KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRG-DSIVLMGKNTLIRRCIKVHSEKTGN 362 +L +LL + L+ + K++ ++R LR DS+ + KNTL+RR I G+ Sbjct: 14 ELKELLADAELALVLDFKGLSIKEMSDLRDRLRASDSVCKVTKNTLMRRAI------DGD 67 Query: 363 KDFLELSNLLVGNVGLIFTKGDL 431 ++ L +LL G + KGD+ Sbjct: 68 SNWASLDSLLTGTNAFVLVKGDV 90
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 39.3 bits (90), Expect = 0.006 Identities = 33/113 (29%), Positives = 52/113 (46%) Frame = +3 Query: 162 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 341 E K A + Q L+ + + I N+ + L+ IR +G S + MGK ++ + + Sbjct: 21 EGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGH 79 Query: 342 HSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAP 500 E+ ++ +L+ LL G VGL+FT EV AR G VAP Sbjct: 80 TPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFVQNDFARAGAVAP 132
>RLA0_METMA (Q8PY51) Acidic ribosomal protein P0 homolog (L10E)| Length = 347 Score = 37.7 bits (86), Expect = 0.018 Identities = 22/109 (20%), Positives = 54/109 (49%) Frame = +3 Query: 183 QKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGN 362 + + +L++ + + + + + ++Q+IR+ L+ +++ + +NTL R + E Sbjct: 20 ENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIP- 78 Query: 363 KDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 E++ L LIFT ++ + + + K +P + G +AP D+ Sbjct: 79 ----EMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDI 123
>RLA0_METAC (Q8TI80) Acidic ribosomal protein P0 homolog (L10E)| Length = 347 Score = 37.7 bits (86), Expect = 0.018 Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Frame = +3 Query: 183 QKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKT-G 359 + + +L++ + + + + + ++Q+IR+ L+ +++ + +NTL R + E G Sbjct: 20 ENIKELIQSHKVFGMVGIEGILATKMQKIRRDLKDVAVLKVSRNTLTERALNQLGETIPG 79 Query: 360 NKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 K++L+ LIFT ++ + + + K +P R G +AP D+ Sbjct: 80 MKEYLDKQT------ALIFTNESPFKLYKLLEQTKTPSPIRGGAIAPADI 123
>RL10_TROWT (Q83FL0) 50S ribosomal protein L10| Length = 166 Score = 36.6 bits (83), Expect = 0.041 Identities = 25/90 (27%), Positives = 44/90 (48%) Frame = +3 Query: 189 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 368 L +L + ++ + + QL+ +R LRGD+ L+ KNTL R + +++ G D Sbjct: 10 LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65 Query: 369 FLELSNLLVGNVGLIFTKGDLKEVREEVAK 458 F E L G ++ GD+ V + + K Sbjct: 66 FAE---FLRGPTAIVAVDGDIVSVAKSLRK 92
>RL10_TROW8 (Q83HB1) 50S ribosomal protein L10| Length = 166 Score = 36.6 bits (83), Expect = 0.041 Identities = 25/90 (27%), Positives = 44/90 (48%) Frame = +3 Query: 189 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 368 L +L + ++ + + QL+ +R LRGD+ L+ KNTL R + +++ G D Sbjct: 10 LVGVLSDAQAIVFTEYRGLSAAQLRALRILLRGDASYLIAKNTLAR----IAAQQVGFND 65 Query: 369 FLELSNLLVGNVGLIFTKGDLKEVREEVAK 458 F E L G ++ GD+ V + + K Sbjct: 66 FAE---FLRGPTAIVAVDGDIVSVAKSLRK 92
>RLA0_SULAC (P35023) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 335 Score = 36.6 bits (83), Expect = 0.041 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 2/126 (1%) Frame = +3 Query: 138 MAIKRTKAEKKIAYDQ--KLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGK 311 +A+ TK K D+ +L + L+ + ++IA + + +L EIRK LRG + + + K Sbjct: 4 LAVTTTKKIAKWKVDEVAELTEKLKTHKTIIIANIEGFPADKLHEIRKKLRGKADIKVTK 63 Query: 312 NTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGL 491 N L + K D + L G IFT + E++ ++K K+ A G Sbjct: 64 NNLFNIAL-----KNAGYDTKLFESYLTGPNAFIFTDTNPFELQLFLSKFKLKRYALPGD 118 Query: 492 VAPVDV 509 A +V Sbjct: 119 KADEEV 124
>MRT4_MOUSE (Q9D0I8) mRNA turnover protein 4 homolog| Length = 239 Score = 35.0 bits (79), Expect = 0.12 Identities = 28/109 (25%), Positives = 51/109 (46%) Frame = +3 Query: 183 QKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGN 362 ++L + ++ Y + I N+ + +L++IR + S + GKN ++ + Sbjct: 28 EELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYK 86 Query: 363 KDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVGLVAPVDV 509 + ++S L G VGL+FT +EV E K+ AR G A + V Sbjct: 87 DNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTV 135
>MRT4_HUMAN (Q9UKD2) mRNA turnover protein 4 homolog| Length = 239 Score = 34.7 bits (78), Expect = 0.15 Identities = 26/102 (25%), Positives = 48/102 (47%) Frame = +3 Query: 183 QKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGN 362 ++L + ++ Y + I N+ + +L++IR + S + GKN ++ + Sbjct: 28 EELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYK 86 Query: 363 KDFLELSNLLVGNVGLIFTKGDLKEVREEVAKHKVGAPARVG 488 + ++S L G VGL+FT +EV E K+ AR G Sbjct: 87 DNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAG 128
>RL10_THEFY (Q47LI3) 50S ribosomal protein L10| Length = 175 Score = 33.9 bits (76), Expect = 0.26 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 3/115 (2%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 AE K + +L EY + +A QL E+R+ L ++ + KNTL K Sbjct: 11 AELKEEFQTSSGAVLTEYRGLTVA--------QLTELRRSLGQNARFRVAKNTL----TK 58 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVRE---EVAKHKVGAPARVGLV 494 + +++ G D E+ +LL G + F KGD+ E + + AK + GL+ Sbjct: 59 IAAKEAGVTD-SEVLDLLKGPSAIAFVKGDVVEAAKGLRDFAKENAALVIKGGLI 112
>RL10_PROMM (Q7V477) 50S ribosomal protein L10| Length = 175 Score = 33.5 bits (75), Expect = 0.34 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Frame = +3 Query: 162 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDS-IVLMGKNTLIRRCIK 338 E K ++L LL E L+ + K++ ++R L+ + + + KNTL+R I Sbjct: 6 ESKQQIVEELKGLLGEAEMALVLDYQGLSIKEMSDLRTRLQASNGVCKVTKNTLMRHAIN 65 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDL 431 GN + L +LL G + KGD+ Sbjct: 66 ------GNGAWSNLESLLTGTNAFVLIKGDV 90
>RL10_SYNJB (Q2JM49) 50S ribosomal protein L10| Length = 187 Score = 33.1 bits (74), Expect = 0.45 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +3 Query: 165 KKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLR-GDSIVLMGKNTLIRRCIKV 341 KK K+ LL+ VL+ + ++ ++R LR DS+ ++ KNTL+RR I Sbjct: 8 KKAEIVDKVRSLLQASQMVLVIDYKGLTVAEMDQLRAELRKSDSVCMVVKNTLMRRAI-- 65 Query: 342 HSEKTGNKDFLELSNLLVGNVGLIFTKGDL 431 K + + L G I +GD+ Sbjct: 66 ----ADQKAWAGIIPFLAGPTAFILIRGDI 91
>RL10_MYCTU (P66044) 50S ribosomal protein L10| Length = 178 Score = 32.0 bits (71), Expect = 1.0 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%) Frame = +3 Query: 156 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 335 +A+K A Q +E T LI + L E+R+ L G + + KNTLI+R Sbjct: 3 RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60 Query: 336 KVHSEKTGNKDFLELSNLLVGNVGLIFTKGD----LKEVREEVAKHK 464 + + G + L L VG + F G+ K ++ +HK Sbjct: 61 ---ASEAGIEG---LDELFVGPTAIAFVTGEPVDAAKAIKTFAKEHK 101
>RL10_MYCBO (P66045) 50S ribosomal protein L10| Length = 178 Score = 32.0 bits (71), Expect = 1.0 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%) Frame = +3 Query: 156 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 335 +A+K A Q +E T LI + L E+R+ L G + + KNTLI+R Sbjct: 3 RADKATAVADIAAQF-KESTATLITEYRGLTVANLAELRRSLTGSATYAVAKNTLIKRA- 60 Query: 336 KVHSEKTGNKDFLELSNLLVGNVGLIFTKGD----LKEVREEVAKHK 464 + + G + L L VG + F G+ K ++ +HK Sbjct: 61 ---ASEAGIEG---LDELFVGPTAIAFVTGEPVDAAKAIKTFAKEHK 101
>RL10_NOCFA (Q5YPC7) 50S ribosomal protein L10| Length = 176 Score = 30.8 bits (68), Expect = 2.2 Identities = 23/91 (25%), Positives = 44/91 (48%) Frame = +3 Query: 156 KAEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCI 335 KAEK A + + + + T ++ + +L E+R+ L ++ + KNTL++R Sbjct: 3 KAEKVTAVAE-IAEQFKSSTATVVTEYRGLSVGKLTELRRALGAEATYSVAKNTLVKRA- 60 Query: 336 KVHSEKTGNKDFLELSNLLVGNVGLIFTKGD 428 + + G + L +L VG + F KG+ Sbjct: 61 ---AAEAGVEG---LDDLFVGPTAITFIKGE 85
>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)| (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus and actin connecting element protein) (NUANCE protein) Length = 6885 Score = 30.4 bits (67), Expect = 2.9 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%) Frame = +3 Query: 168 KIAYDQKLCQLLEEYTKVLIAVADNVGSKQL---QEIRKGLRGDSIVLMGKNTLIRRCI- 335 ++ + K C+ E T L AD++ +L QE+ KG++ + L + T I+ CI Sbjct: 2937 EVEHKIKFCRQFHEKTSALQEEADSIQRNELLLNQEVNKGVKEEIYNLKDRLTAIKCCIL 2996 Query: 336 ------KVHSEKTGNKDFLELSNL 389 KV N DF +L L Sbjct: 2997 QVLKLKKVFDYIGLNWDFSQLDQL 3020
>RL10_CORGL (Q8NT29) 50S ribosomal protein L10| Length = 171 Score = 30.0 bits (66), Expect = 3.8 Identities = 27/100 (27%), Positives = 45/100 (45%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 AE K + + +L EY + +A Q E+RK L D + KNTL +K Sbjct: 11 AELKARFAETDTVVLTEYRGLTVA--------QTTELRKALGFDVQYSVAKNTL----VK 58 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 458 + + + G + L +LL G + F KG+ + + + K Sbjct: 59 IAANEAGVEG---LDDLLTGPTAVAFIKGEAVDTAKVLKK 95
>RL10_COREF (Q8FSA1) 50S ribosomal protein L10| Length = 171 Score = 30.0 bits (66), Expect = 3.8 Identities = 26/100 (26%), Positives = 46/100 (46%) Frame = +3 Query: 159 AEKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIK 338 AE K + + +L EY + +A Q E+R+ L D + KNTL +K Sbjct: 11 AELKAQFAETDSIVLTEYRGLTVA--------QTTELRRALGDDVQYSVAKNTL----VK 58 Query: 339 VHSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAK 458 + +++ G + L +LL G + F KG+ + + + K Sbjct: 59 IAAQEAGVEG---LDDLLTGPTAVAFIKGEAVDTAKVLKK 95
>IF2_PORGI (Q7MXE4) Translation initiation factor IF-2| Length = 979 Score = 29.6 bits (65), Expect = 5.0 Identities = 10/25 (40%), Positives = 20/25 (80%) Frame = -1 Query: 79 ERRVDEDQAREKSEADGLRRRRRFN 5 +++ ED+ RE+++ADG ++R+R N Sbjct: 257 KKKTKEDRQREQNDADGKKKRKRIN 281
>RL10_MYCPA (Q73SE9) 50S ribosomal protein L10| Length = 196 Score = 29.3 bits (64), Expect = 6.5 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = +3 Query: 189 LCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKD 368 + + +E T LI + L E+R+ L G + + KNTL++R + + G + Sbjct: 13 IAEQFKEATATLITEYRGLTVANLAELRRSLSGAATYSVAKNTLVKRA----ASEAGIEG 68 Query: 369 FLELSNLLVGNVGLIFTKGD----LKEVREEVAKHK 464 L L G + F G+ K ++ +HK Sbjct: 69 ---LDELFAGPTAIAFVTGEPVDAAKAIKTFAKEHK 101
>PSPC_HUMAN (P11686) Pulmonary surfactant-associated protein C precursor (SP-C)| (SP5) (Pulmonary surfactant-associated proteolipid SPL(Val)) Length = 197 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +2 Query: 176 VRPEALPVARGVHQGAHRRRRQCRLQAAPGDPQGSPR*LHRAHGQEHPDPP 328 + PE++P +++ H + +C LQA P P L +A G++ P Sbjct: 126 IAPESIPSLEALNRKVHNFQMECSLQAKPAVPTSK---LGQAEGRDAGSAP 173
>EGO_ECOLI (P77257) Putative ABC transporter ATP-binding protein ego (EGO10A)| Length = 511 Score = 28.9 bits (63), Expect = 8.5 Identities = 21/69 (30%), Positives = 34/69 (49%) Frame = +3 Query: 240 NVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLELSNLLVGNVGLIFT 419 +V +Q+ EI +GL DS +L+ L + +T + F L LL VG++F Sbjct: 142 DVADRQMVEILRGLMRDSRILI----LDEPTASLTPAET-ERLFSRLQELLATGVGIVFI 196 Query: 420 KGDLKEVRE 446 L E+R+ Sbjct: 197 SHKLPEIRQ 205
>ATPO_RAT (Q06647) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 28.9 bits (63), Expect = 8.5 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Frame = +3 Query: 252 KQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEK--TGNKDFLELS----NLLVGNVGLI 413 K+L + + L+ + L N I+R IKV S K T + F L+ NLL N L Sbjct: 60 KELLRVGQLLKDPKVSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLG 119 Query: 414 FTKGDLKEVREEVAKHKVGAPARVGLVAPVD 506 T+G + ++ H+ P V P+D Sbjct: 120 NTQGVISAFSTIMSVHRGEVPCTVTTAFPLD 150
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3343 Score = 28.9 bits (63), Expect = 8.5 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +3 Query: 243 VGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLELSNLLV 395 VG L + +K LR S L +NT+ +C+K H+E E S +++ Sbjct: 1655 VGESSLSKGKKWLREQSDKLGTRNTIEIQCVKEHTEDFAGNALYEHSLVII 1705 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,855,138 Number of Sequences: 219361 Number of extensions: 832100 Number of successful extensions: 3533 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 3392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3505 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
