>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC|
           2.3.1.167) (DBAT)
          Length = 440

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
 Frame = +2

Query: 215 FDTYISVIYAFHAPAPPNAVLEAGLGRALVDHREWAGRLGVDASGGRAILLNDAGARFVE 394
           F+T +    +      P  V+   L + LV +  +AGRL    +G   +     GA FVE
Sbjct: 44  FNTLLVYNASDRVSVDPAKVIRQALSKVLVYYSPFAGRLRKKENGDLEVECTGEGALFVE 103

Query: 395 ATADV------ALDSVMP--------LKPTSEVLSLHP 466
           A AD        LD   P        L P +++  +HP
Sbjct: 104 AMADTDLSVLGDLDDYSPSLEQLLFCLPPDTDIEDIHP 141

>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = -1

Query: 339  STPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVHP 166
            ++PS P+ S WS S  PSPA+ T+   AGA  A    + V  L  S T  G    V P
Sbjct: 2257 ASPSPPSLSDWSDST-PSPATATSATAAGALPAQPHPISVPSLPQSQTQLGPQPEVTP 2313

>CD52_RAT (Q63064) CAMPATH-1 antigen precursor (Lymphocyte differentiation|
           antigen B7) (CD52 antigen) (CDw52)
          Length = 96

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = -1

Query: 306 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH--PGATPQAPYSGL 133
           +++A+ +PA++ A   A   KA            ++T + TT+AV   PG  P+A  S +
Sbjct: 26  NSTAVTTPANKAATTAAATTKA-----------AATTATKTTTAVRKTPGKPPKAGASSI 74

Query: 132 TALDECTVIFMS 97
           T +  CT +F +
Sbjct: 75  TDVGACTFLFFA 86

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
 Frame = -1

Query: 381 APASLSRIARPP--------LASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEM 226
           APA  +  A PP        LA  P  PA    +  A+P PA+    G AGA  A     
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA----- 314

Query: 225 YVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 127
                  +   +G +    PGA   AP  G+ A
Sbjct: 315 ---PAPAAGGPAGVSGQPGPGAAAAAPAPGVKA 344

>TID_DROME (Q27237) Protein tumorous imaginal discs, mitochondrial precursor|
           (Protein lethal(2)tumorous imaginal discs) (TID56)
           (TID50)
          Length = 520

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 430 RHDAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGP 317
           R D  ++       EPGAG   +  AAAAG  A  PGP
Sbjct: 437 RKDGSKQATAGASEEPGAGAAAKASAAAAGSGASKPGP 474

>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = -1

Query: 378 PASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLALSS 199
           PA  S  AR P+ S P R +HSRW        ASRT    A +  + +T    ++ +LS 
Sbjct: 275 PAKESSTARCPVLSIPCRLSHSRWFA------ASRTE---ATSLVSVVTPGSSTRRSLSH 325

Query: 198 TVSGTTSAVHPGATPQA 148
             + + +A  P    QA
Sbjct: 326 PAAASNNAFGPSPVVQA 342

>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor|
          Length = 1783

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
 Frame = -1

Query: 360 IARPPLASTPSRP----AHSRWSTSALPSPAS----RTALGGAGAWKA*ITEMYVSKLAL 205
           +A PP A TPS P    A +R ++SAL + +S    R A+ G            V+    
Sbjct: 286 VAAPPAAPTPSPPGLAAAPTRLASSALGTHSSDGDMRRAVPGRDTPSLSAVAGPVTLSGS 345

Query: 204 SSTVSGTTSAVHPGATPQAPYSGLTALDECTVIFMSTANVRKNEAGPQ 61
           SS+ SG  S+ +   +  +  +G+T           T+NV  N A PQ
Sbjct: 346 SSSSSGRNSSSNSNTSTSSTSNGVTI----------TSNVGVNGASPQ 383

>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate|
           regulatory protein algR3)
          Length = 352

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = -1

Query: 378 PASLSRIARP---PLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLA 208
           PA+ +  A+P   P A   ++PA    + SA   PA++ A   A    A      V+   
Sbjct: 249 PAAKTAAAKPAAKPAAKPAAKPAAKPVAKSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKP 308

Query: 207 LSSTVSGTTSAVHPGATPQAPYSGLTA 127
            ++T   T  A  P ATP AP +  +A
Sbjct: 309 -AATKPATAPAAKPAATPSAPAAASSA 334

>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC|
           2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin
           III-2-O-benzoyl transferase) (DBBT)
          Length = 440

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
 Frame = +2

Query: 257 APPNAVLEAGLGRALVDHREWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLK 436
           A P   +   L + LV +  +AGRL    +G   +     GA FVEA AD  L  +    
Sbjct: 54  ADPAKTIREALSKVLVYYPPFAGRLRNTENGDLEVECTGEGAVFVEAMADNDLSVLQDFN 113

Query: 437 ---PTSEVLSLHPSGDDGPEELMLI 502
              P+ + L  +   D   E+L L+
Sbjct: 114 EYDPSFQQLVFNLREDVNIEDLHLL 138

>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 257 APPNAVLEAGLGRALVDHREWAGRLGVDASGGRAILLNDAGARFVEATAD 406
           A P  ++   L + LV +  +AGRL    +G   +     GA F+EA AD
Sbjct: 60  ADPAKLIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMAD 109

>COAT_CNV (P15183) Coat protein|
          Length = 380

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = -1

Query: 351 PPLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAV 172
           P L S     A S  +   LP  +   A      W+A +   YV  +  +STV G T ++
Sbjct: 262 PLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSI 321

Query: 171 HPGATPQAPYSGLTA 127
             G T  + +S  TA
Sbjct: 322 SGGGTINSSFSVSTA 336

>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 637

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 378 PASLSRIARPPLASTPSRPAHSRWSTSALPSPAS 277
           P  L   A PP A  P+ PA  R S + LP+PA+
Sbjct: 32  PPHLRNRAAPPAAVPPAAPAAYRPSPTGLPTPAT 65

>MOXJ_METEX (P16028) Protein moxJ precursor|
          Length = 300

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +2

Query: 56  ARCGPASFLRTFAVDMKITVHSSKAVKPEYGACGVAPGCTADVVPLTVLDKANFDTYISV 235
           A C PA      A D K T  +++A KP+ G   V   C A+  PL++ D +  +  I+ 
Sbjct: 26  ALCAPAQ-----AQDTKATSKAAEAAKPDAGTLRV---CAAEQPPLSMKDGSGLENRIAT 77

Query: 236 IYA 244
             A
Sbjct: 78  TVA 80

>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
 Frame = +2

Query: 185 VPLTVLDKANFDTYI-SVIYAFHAP----APPNAVLEAGLGRALVDHREWAGRLGVDASG 349
           V L+V+D       I + +  F+AP    A P  ++   L + LV +   AGRL     G
Sbjct: 30  VQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKIIREALSKVLVYYFPLAGRLRSKEIG 89

Query: 350 GRAILLNDAGARFVEATAD---VALDSVMPLKPTSEVLSLHPSGDDGPEELMLI 502
              +     GA FVEA  +     L  +  L P+ + L      D   E+L L+
Sbjct: 90  ELEVECTGDGALFVEAMVEDTISVLRDLDDLNPSFQQLVFWHPLDTAIEDLHLV 143

>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50) (56 kDa autoantigen)
          Length = 505

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -1

Query: 351 PPLASTPSRPAHSRWSTSALPSPASRTALG--GAGAWKA*ITEMYVSKLALSSTVSGTTS 178
           PP    P+ P    W  +A P P S   +G      +     + Y+S +A  + +SGT  
Sbjct: 9   PPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMA--ANMSGTFG 66

Query: 177 AVH-PGATPQAPYSG 136
             + P   P AP +G
Sbjct: 67  GANMPNLYPGAPGAG 81

>ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 12) (ADAM-TS
            12) (ADAM-TS12)
          Length = 1593

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = -1

Query: 357  ARPPLASTPSRPAHSRWSTSALPSPASRTA-----LGGAGAWKA*ITEMYVSKLALSSTV 193
            +RP + +TP+ P     ST A+ SP+  TA     LGG   W+   T+  +S   L ST 
Sbjct: 1026 SRPRMLTTPTGPESMSTSTPAISSPSPTTASKEGDLGGK-QWQDSSTQPELSSRYLIST- 1083

Query: 192  SGTTS 178
             G+TS
Sbjct: 1084 -GSTS 1087

>ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R)|
          Length = 1880

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 424  DAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGPLAVVHQR 296
            D +E+  G+R  E   G   QD A  AG D+E    L   HQR
Sbjct: 1635 DLLEQEEGQRSEEKLPGSKRQDDATGAGQDSENEVSLVSGHQR 1677

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = -1

Query: 306 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 127
           + +A P  A+ TA   A A        Y+S  AL+S    T +A HPG  PQ     + A
Sbjct: 650 TAAAAPQSAAATAAAAAAASH----HHYLSSPALASPAGSTNNASHPG-NPQ-----IAA 699

Query: 126 LDECTVIFMS 97
              C+ +F++
Sbjct: 700 NAPCSTLFVA 709

>BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO domain-containing|
            protein 1)
          Length = 970

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 25/88 (28%), Positives = 34/88 (38%)
 Frame = -1

Query: 387  NRAPASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLA 208
            N +P S SR   PP A  P RP++S   T   P  A  T                  +  
Sbjct: 883  NESPGSYSR---PPPALPPKRPSYSAQPTPHAPPQAPYTQF----------------QPQ 923

Query: 207  LSSTVSGTTSAVHPGATPQAPYSGLTAL 124
             S+    ++S+ +P   PQ P SG   L
Sbjct: 924  ASNYTDNSSSSANPTNLPQHPDSGTNDL 951

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 378 PASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGA 250
           P SLS   +PP  + PS P+ + WS    P P     L  + A
Sbjct: 414 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNA 456

>DMI1_MEDTR (Q6RHR6) Putative ion channel DMI-1 (Does not make infections|
           protein 1)
          Length = 882

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 387 NRAPASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEM---YVS 217
           N   ++L+ + +PPL  T + P+ +   +   P+P     +GG    K   +E    Y S
Sbjct: 5   NEESSNLNVMNKPPLKKTKTLPSLNLRVSVTPPNPNDNNGIGGTSTTKTDFSEQQWNYPS 64

Query: 216 KLALSST 196
            L + ST
Sbjct: 65  FLGIGST 71

>PPCK_HAECO (P29190) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)|
           (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 619

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 128 AVKPEYGACGVAPGCTADVVPLTV 199
           A+ PEYG  GVAPG +    P+ V
Sbjct: 320 AINPEYGFFGVAPGTSKKTNPMAV 343

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 378 PASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGA 250
           P SLS   +PP  + PS P+ + WS    P P     L  + A
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNA 457

>ILVD_GLUOX (Q5FN26) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 618

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = -1

Query: 333 PSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH 169
           P+R  H   S S +     R    GA AWK    E  VSK AL +  + TTSA H
Sbjct: 551 PNRTLHLAVSDSDIADRRERMNARGASAWKP-NRERVVSK-ALQAYAAMTTSAAH 603

>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 257 APPNAVLEAGLGRALVDHREWAGRLGVDASGGRAILLNDAGARFVEATAD 406
           A P   +   L + LV +  +AGRL    +G   +     GA F+EA AD
Sbjct: 60  ADPAKPIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMAD 109

>TCOF_MOUSE (O08784) Treacle protein (Treacher Collins syndrome protein|
           homolog)
          Length = 1320

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
 Frame = -1

Query: 381 APASLSRIARPPLASTPSRPAHSRWSTSALPSPASRTALGGAGAWKA*ITEMYVSKLALS 202
           APA+ +  A+P L       +      SA  +  S     GA    A ++   ++K    
Sbjct: 543 APAASAAQAKPALEKQMKASSRKGTPASATGASTSSHCKAGAVTSSASLSSPALAKGTQR 602

Query: 201 STVSGTTSAVHPGATPQAP----YSGLTALDECTVIFMSTANVRKNEAGPQ---RARQLS 43
           S V  ++ +   GA P  P     SG   L     +    A V   + GP     A++ S
Sbjct: 603 SDVDSSSESESEGAAPSTPRVQGKSGGKGLQGKAALGQGVAPVHTQKTGPSVKAMAQEDS 662

Query: 42  WCYKQDSS 19
              ++DSS
Sbjct: 663 ESLEEDSS 670


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,482,854
Number of Sequences: 219361
Number of extensions: 907811
Number of successful extensions: 4203
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4197
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)