ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit mRNA, complete cds Length = 860 Score = 797 bits (402), Expect = 0.0 Identities = 448/462 (96%), Gaps = 1/462 (0%) Strand = Plus / Plus Query: 91 gacgacgcgatgatccccaacctctccgccctcgagaaccacttcggcgcggccgccgcc 150 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 gacgacgcgatgattcccaacctctccgccctcgagaaccacttcggcgccgccgccgcc 60 Query: 151 ggcggcgacgacttcgccggcctcttctccgccgacgccgccggccagctcgccctcgag 210 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 61 ggcagcgacgacttcgccggcctcttctccgccgacgccgccgaccagctcgccctcgag 120 Query: 211 ttccccacctgcgacgacttcgacgggttccagaaggcggccaaggcgatggtgaacaac 270 |||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct: 121 ttccccacctgcaacgacttcgatgggttccagaaggcgaccaaggagatggtgaacaac 180 Query: 271 aagaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgac 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgac 240 Query: 331 tcccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatcatcgagatt 390 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 tcccgggccagcatgggcggctacatatcttcgcaaactgtgaggaaaatcatcgagatt 300 Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 360 Query: 451 aacttgggggtcaagtgccggctccatgagcttgcgaacaagcgaaggatctctattgct 510 |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 361 aacttgggggtcaagtgccggctccatgagctcgcgaacaagcggaggatctccattgct 420 Query: 511 ggttcttc-aagacgttggctaatatcctttattcgtaccgc 551 |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 421 ggttcttcaaagacgttggctaatatcctttattcataccgc 462
>dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E06, full insert sequence Length = 1099 Score = 363 bits (183), Expect = 4e-97 Identities = 355/411 (86%), Gaps = 6/411 (1%) Strand = Plus / Plus Query: 113 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 172 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 70 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 129 Query: 173 tcttctccgccgacgccgccggccagctcgccctcgagttccccacctgc---gacgact 229 ||||| ||||| ||||| | | || |||| | ||| ||||||||||| | ||||| Sbjct: 130 tcttcggcgccggcgccgac---ctgcccgccatggagctccccacctgccccgccgact 186 Query: 230 tcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccaccacgc 289 |||||||||||||||||| | |||||| |||| |||| |||||||||| || ||||||| Sbjct: 187 tcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgc 246 Query: 290 tctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggcg 349 || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 247 tcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcg 306 Query: 350 gctacatatcttcgcaaactgtgagaaaaatcatcgagattaatccctacatgctgggaa 409 | ||||||||||||||||||||||| ||||| || || || ||||| |||||||| |||| Sbjct: 307 gatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaa 366 Query: 410 ccatggctggaggtgctgctgattgccaattttggcatagaaacttgggggtcaagtgcc 469 | ||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 367 caatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaagtgcc 426 Query: 470 ggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 | ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 427 gactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 477
>dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C04, full insert sequence Length = 1099 Score = 363 bits (183), Expect = 4e-97 Identities = 355/411 (86%), Gaps = 6/411 (1%) Strand = Plus / Plus Query: 113 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 172 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 70 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 129 Query: 173 tcttctccgccgacgccgccggccagctcgccctcgagttccccacctgc---gacgact 229 ||||| ||||| ||||| | | || |||| | ||| ||||||||||| | ||||| Sbjct: 130 tcttcggcgccggcgccgac---ctgcccgccatggagctccccacctgccccgccgact 186 Query: 230 tcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccaccacgc 289 |||||||||||||||||| | |||||| |||| |||| |||||||||| || ||||||| Sbjct: 187 tcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgc 246 Query: 290 tctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggcg 349 || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 247 tcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcg 306 Query: 350 gctacatatcttcgcaaactgtgagaaaaatcatcgagattaatccctacatgctgggaa 409 | ||||||||||||||||||||||| ||||| || || || ||||| |||||||| |||| Sbjct: 307 gatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaa 366 Query: 410 ccatggctggaggtgctgctgattgccaattttggcatagaaacttgggggtcaagtgcc 469 | ||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 367 caatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaagtgcc 426 Query: 470 ggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 | ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 427 gactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 477
>dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099E18, full insert sequence Length = 1217 Score = 357 bits (180), Expect = 2e-95 Identities = 267/296 (90%) Strand = Plus / Plus Query: 225 cgacttcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccac 284 ||||||||||||||||||||||| | |||||| |||| |||| |||||||||| || || Sbjct: 187 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 246 Query: 285 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 344 ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 247 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 306 Query: 345 gggcggctacatatcttcgcaaactgtgagaaaaatcatcgagattaatccctacatgct 404 |||||| ||||||||||||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 307 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 366 Query: 405 gggaaccatggctggaggtgctgctgattgccaattttggcatagaaacttgggggtcaa 464 ||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 367 tggaacaatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaa 426 Query: 465 gtgccggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 |||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 427 gtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 482
>dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mRNA for beta 5 subunit of 20S proteasome, complete cds Length = 1233 Score = 357 bits (180), Expect = 2e-95 Identities = 267/296 (90%) Strand = Plus / Plus Query: 225 cgacttcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccac 284 ||||||||||||||||||||||| | |||||| |||| |||| |||||||||| || || Sbjct: 181 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 240 Query: 285 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 344 ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 241 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 300 Query: 345 gggcggctacatatcttcgcaaactgtgagaaaaatcatcgagattaatccctacatgct 404 |||||| ||||||||||||||||||||||| ||||| || || || ||||| |||||||| Sbjct: 301 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 360 Query: 405 gggaaccatggctggaggtgctgctgattgccaattttggcatagaaacttgggggtcaa 464 ||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 361 tggaacaatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaa 420 Query: 465 gtgccggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 |||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 421 gtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 476
>gb|BT016601.1| Zea mays clone Contig434 mRNA sequence Length = 1072 Score = 305 bits (154), Expect = 8e-80 Identities = 290/334 (86%), Gaps = 1/334 (0%) Strand = Plus / Plus Query: 212 tccccacctgcgacgacttcgacgggttccagaaggcggccaaggcgatggtgaacaaca 271 |||||| |||||||||||||||||| |||||| ||| |||||| |||||||| || | Sbjct: 180 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 239 Query: 272 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 331 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 240 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 299 Query: 332 cccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatcatcgagatta 391 || |||||||||||||||| || ||||| || ||||| ||||| ||||| || || || | Sbjct: 300 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 359 Query: 392 atccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcatagaa 451 |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 360 atccttacatgctggggacaatggctggaggtgctgctgattgccaattttggcatagga 419 Query: 452 acttgggggtcaagtgccggctccatgagcttgcgaacaagcgaaggatctctattgctg 511 || | || |||||| || |||||||||||| | ||||||||||||||||||||||||| Sbjct: 420 acctaggaaccaagtgtcgtctccatgagctttcaaacaagcgaaggatctctattgctg 479 Query: 512 gttcttcaagac-gttggctaatatcctttattc 544 || |||| | || ||||||||| ||||||||||| Sbjct: 480 gtgcttccaaactgttggctaacatcctttattc 513
>gb|AY103704.1| Zea mays PCO130904 mRNA sequence Length = 1115 Score = 305 bits (154), Expect = 8e-80 Identities = 290/334 (86%), Gaps = 1/334 (0%) Strand = Plus / Plus Query: 212 tccccacctgcgacgacttcgacgggttccagaaggcggccaaggcgatggtgaacaaca 271 |||||| |||||||||||||||||| |||||| ||| |||||| |||||||| || | Sbjct: 205 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 264 Query: 272 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 331 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 265 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 324 Query: 332 cccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatcatcgagatta 391 || |||||||||||||||| || ||||| || ||||| ||||| ||||| || || || | Sbjct: 325 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 384 Query: 392 atccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcatagaa 451 |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 385 atccttacatgctggggacaatggctggaggtgctgctgattgccaattttggcatagga 444 Query: 452 acttgggggtcaagtgccggctccatgagcttgcgaacaagcgaaggatctctattgctg 511 || | || |||||| || |||||||||||| | ||||||||||||||||||||||||| Sbjct: 445 acctaggaaccaagtgtcgtctccatgagctttcaaacaagcgaaggatctctattgctg 504 Query: 512 gttcttcaagac-gttggctaatatcctttattc 544 || |||| | || ||||||||| ||||||||||| Sbjct: 505 gtgcttccaaactgttggctaacatcctttattc 538
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Minus Query: 229 ttcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccaccacg 288 ||||||||||||||||||| | |||||| |||| |||| |||||||||| || |||||| Sbjct: 2772703 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 2772644 Query: 289 ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 348 ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2772643 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 2772584 Query: 349 ggctacatat 358 || ||||||| Sbjct: 2772583 ggatacatat 2772574 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 359 cttcgcaaactgtgagaaaaatcatcgagattaatccctacatgctgggaaccatggctg 418 |||||||||||||||| ||||| || || || ||||| |||||||| ||||| ||||| | Sbjct: 2771656 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcag 2771597 Query: 419 gaggtgctgctgattgccaattttggcatagaaacttggg 458 |||||||||||||||| |||||||||||||| |||||||| Sbjct: 2771596 gaggtgctgctgattgtcaattttggcataggaacttggg 2771557 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 464 agtgccggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 2771481 agtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 2771425 Score = 44.1 bits (22), Expect = 0.48 Identities = 64/78 (82%) Strand = Plus / Minus Query: 113 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 172 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 2772933 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 2772874 Query: 173 tcttctccgccgacgccg 190 ||||| ||||| ||||| Sbjct: 2772873 tcttcggcgccggcgccg 2772856 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 310 ggcgtcatcgtcgccgccgactcccgggccagca 343 |||||| || ||||||||||||||||| |||||| Sbjct: 2093420 ggcgtcgtcctcgccgccgactcccggaccagca 2093387 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccgacgccgccggccagctcgc 203 |||| ||||||||||||||||||| Sbjct: 30322709 cgcccacgccgccggccagctcgc 30322686
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Minus Query: 229 ttcgacgggttccagaaggcggccaaggcgatggtgaacaacaagaaggggaccaccacg 288 ||||||||||||||||||| | |||||| |||| |||| |||||||||| || |||||| Sbjct: 16184 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 16125 Query: 289 ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 348 ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 16124 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 16065 Query: 349 ggctacatat 358 || ||||||| Sbjct: 16064 ggatacatat 16055 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 359 cttcgcaaactgtgagaaaaatcatcgagattaatccctacatgctgggaaccatggctg 418 |||||||||||||||| ||||| || || || ||||| |||||||| ||||| ||||| | Sbjct: 15137 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcag 15078 Query: 419 gaggtgctgctgattgccaattttggcatagaaacttggg 458 |||||||||||||||| |||||||||||||| |||||||| Sbjct: 15077 gaggtgctgctgattgtcaattttggcataggaacttggg 15038 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 464 agtgccggctccatgagcttgcgaacaagcgaaggatctctattgctggttcttcaa 520 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||| Sbjct: 14962 agtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaa 14906 Score = 44.1 bits (22), Expect = 0.48 Identities = 64/78 (82%) Strand = Plus / Minus Query: 113 tctccgccctcgagaaccacttcggcgcggccgccgccggcggcgacgacttcgccggcc 172 |||||||| | |||||| |||||| ||| ||||||||||||||| ||| || ||||| Sbjct: 16414 tctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcc 16355 Query: 173 tcttctccgccgacgccg 190 ||||| ||||| ||||| Sbjct: 16354 tcttcggcgccggcgccg 16337
>gb|AY683448.1| Lemna minor 26S proteasome beta subunit mRNA, partial cds Length = 349 Score = 121 bits (61), Expect = 3e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 323 ccgccgactcccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatca 382 ||||||| |||||||| |||||||| || || || ||||| || | |||| ||||||| Sbjct: 63 ccgccgattcccgggctagcatgggaggatatatctcttctcagtcggtgaagaaaatca 122 Query: 383 tcgagattaatccctacatgctgggaaccatggctggaggtgctgctgattgccaatttt 442 | ||||| || ||||||||||| || || ||||||||||| || || ||||||||||||| Sbjct: 123 tagagatcaacccctacatgcttgggacaatggctggaggcgccgcagattgccaatttt 182 Query: 443 ggcatagaaacttgggggtcaagtgccggctccatgagcttgcgaacaagcgaaggatct 502 |||||||||||||||| |||||||||| || ||||| || || |||||| |||| |||| Sbjct: 183 ggcatagaaacttgggcatcaagtgccgcctgcatgaactggcaaacaagagaagaatct 242 Query: 503 c 503 | Sbjct: 243 c 243
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 99.6 bits (50), Expect = 9e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 68214 attaatccgtacatgcttggaactatggctggaggtgctgctgattgccaattttggcat 68273 Query: 448 ag 449 || Sbjct: 68274 ag 68275
>dbj|D78172.1| Spinacia oleracea mRNA for 26S proteasome beta subunit, complete cds Length = 1096 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 331 tcccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatcatcgagatt 390 ||||| || |||||||| || || ||||| || ||| |||||| ||||| || || || Sbjct: 262 tcccgagctagcatgggaggatatatatcgtctcaatctgtgaagaaaattattgaaatc 321 Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || ||||||||||| || |||||||| || || ||||||||| || Sbjct: 322 aatccttatatgcttggtaccatggctggtggggctgctgactgtcagttttggcatcga 381 Query: 451 aacttgggggtcaagtgccggctccatgagcttgcgaacaagcgaag 497 |||||||| ||||||||||| | ||||| ||||| ||||||||||| Sbjct: 382 aacttgggcatcaagtgccggttgcatgaacttgcaaacaagcgaag 428
>gb|AY623107.1| Pisum sativum 26S proteasome beta subunit mRNA, partial cds Length = 161 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 410 ccatggctggaggtgctgctgattgccaattttggcatagaaacttgggggtcaagtgcc 469 |||||||||| || |||||||| || || ||||||||| |||||||||| ||||||||| Sbjct: 2 ccatggctggtggggctgctgactgtcagttttggcatcgaaacttgggcatcaagtgcc 61 Query: 470 ggctccatgagcttgcgaacaagcgaag 497 || | ||||| ||||| ||||||||||| Sbjct: 62 ggttgcatgaacttgcaaacaagcgaag 89
>emb|AJ291741.1|NTA291741 Nicotiana tabacum partial mRNA for putative beta5 proteasome subunit (b5 gene) Length = 524 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 376 aaaatcatcgagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 435 |||||||| || || ||||| || ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 40 aaaatcattgaaataaatccgtatatgcttggaacaatggctgggggtgctgctgactgc 99 Query: 436 caattttggcatagaaac 453 ||||| |||||||||||| Sbjct: 100 caattctggcatagaaac 117
>gb|AY085678.1| Arabidopsis thaliana clone 16981 mRNA, complete sequence Length = 1105 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| |||||| Sbjct: 389 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaattctggcat 448 Query: 448 agaaacttgggggtcaagtgccggctccatgagcttgcgaacaa 491 ||||| |||| | |||||||| || |||||||| || ||||| Sbjct: 449 agaaatctgggaattaagtgccgtctacatgagctggcaaacaa 492
>gb|AY550121.1| Saussurea medusa 20S proteasome beta subunit E mRNA, partial cds Length = 498 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 331 tcccgggccagcatgggcggctacatatcttcgcaaactgtgagaaaaatcatcgagatt 390 ||||| || |||||||| ||||| || || || ||| |||||| || ||||| || ||| Sbjct: 267 tcccgagctagcatgggaggctatatctcatctcaatctgtgaagaagatcattgaaatt 326 Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 |||||||| ||| |||| || ||||||||||| ||||| |||||||| || ||||| ||| Sbjct: 327 aatccctatatgttgggtacaatggctggaggagctgccgattgccagttctggcacaga 386 Query: 451 aa 452 || Sbjct: 387 aa 388
>gb|DQ450069.1| Arachis hypogaea clone 6A4R2G 20S proteasome beta subunit mRNA, partial cds Length = 802 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| ||||| ||||| |||||||| || ||||||||||||||||| Sbjct: 129 attaatccatatatgcttggaacaatggccggaggtgccgcggattgccaattttggcac 188 Query: 448 agaaa 452 ||||| Sbjct: 189 agaaa 193
>gb|AF323592.1|AF323592 Prunus persica putative 20S proteasome beta subunit 5 mRNA, partial cds Length = 817 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| |||||||| || || ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 66 aatccttacatgcttggtacaatggctggaggagccgctgactgccagttttggcataga 125 Query: 451 aacttgggggtcaagtgccgg 471 || ||||| | ||||||||| Sbjct: 126 aatctggggattaagtgccgg 146
>ref|NM_113541.2| Arabidopsis thaliana endopeptidase/ threonine endopeptidase AT3G26340 mRNA, complete cds Length = 1108 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct: 388 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaattctggcac 447 Query: 448 agaaacttgggggtcaagtgccggctccatgagcttgcgaacaa 491 ||||| |||| | |||||||| || |||||||| || ||||| Sbjct: 448 agaaatctgggaattaagtgccgtctacatgagctggcaaacaa 491
>gb|AY125569.1| Arabidopsis thaliana AT3g26340/F20C19_6 mRNA, complete cds Length = 822 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct: 280 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaattctggcac 339 Query: 448 agaaacttgggggtcaagtgccggctccatgagcttgcgaacaa 491 ||||| |||| | |||||||| || |||||||| || ||||| Sbjct: 340 agaaatctgggaattaagtgccgtctacatgagctggcaaacaa 383
>gb|AF439846.1|AF439846 Arabidopsis thaliana AT3g26340/F20C19_6 mRNA, complete cds Length = 1053 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct: 333 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaattctggcac 392 Query: 448 agaaacttgggggtcaagtgccggctccatgagcttgcgaacaa 491 ||||| |||| | |||||||| || |||||||| || ||||| Sbjct: 393 agaaatctgggaattaagtgccgtctacatgagctggcaaacaa 436
>ref|NM_101176.2| Arabidopsis thaliana PBE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G13060 (PBE1) mRNA, complete cds Length = 1147 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 394 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 453 Query: 451 aa 452 || Sbjct: 454 aa 455
>gb|AY150473.1| Arabidopsis thaliana proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 856 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 283 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 342 Query: 451 aa 452 || Sbjct: 343 aa 344
>emb|Y13695.1|ATY13695 Arabidopsis thaliana mRNA for proteasome subunit prce Length = 1031 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 309 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 368 Query: 451 aa 452 || Sbjct: 369 aa 370
>gb|AY050871.1| Arabidopsis thaliana putative proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 1091 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 376 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 435 Query: 451 aa 452 || Sbjct: 436 aa 437
>gb|AF348579.1| Arabidopsis thaliana clone C00191 (e) putative proteasome epsilon chain precursor (At1g13060) mRNA, complete cds Length = 825 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 283 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 342 Query: 451 aa 452 || Sbjct: 343 aa 344
>emb|BX814144.1|CNS0AC2D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 958 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 295 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 354 Query: 451 aa 452 || Sbjct: 355 aa 356
>emb|BX815505.1|CNS0ABBC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZF03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1031 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 376 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 435 Query: 451 aa 452 || Sbjct: 436 aa 437
>emb|BX841869.1|CNS09Y42 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1023 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 321 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 380 Query: 451 aa 452 || Sbjct: 381 aa 382
>gb|AY089104.1| Arabidopsis thaliana clone 33591 mRNA, complete sequence Length = 1090 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 395 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 454 Query: 451 aa 452 || Sbjct: 455 aa 456
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 26001 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 26060 Query: 451 aa 452 || Sbjct: 26061 aa 26062
>gb|AF043536.1|AF043536 Arabidopsis thaliana 20S proteasome beta subunit PBE1 (PBE1) mRNA, complete cds Length = 1031 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 391 aatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcataga 450 ||||| || ||||| || || ||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 309 aatccttatatgctcggtacaatggctggaggagctgctgattgccaattctggcacaga 368 Query: 451 aa 452 || Sbjct: 369 aa 370
>emb|AJ011383.1|CAR011383 Cicer arietinum mRNA for 20S proteasome beta subunit Length = 1043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 424 gctgctgattgccaattttggcatagaaa 452 ||||||||||||||||||||||||||||| Sbjct: 286 gctgctgattgccaattttggcatagaaa 314
>dbj|AP001298.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F20C19 Length = 71184 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 388 attaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttggcat 447 |||||||| || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct: 15760 attaatccttatatgcttggtacaatggctggtggtgctgctgattgtcaattctggcac 15701 Query: 448 agaaa 452 ||||| Sbjct: 15700 agaaa 15696
>dbj|AK175091.1| Ciona intestinalis cDNA, clone:cixxx00142, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 406 ggaaccatggctggaggtgctgctgattgc 435 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>dbj|AK175090.1| Ciona intestinalis cDNA, clone:cixxx00141, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 406 ggaaccatggctggaggtgctgctgattgc 435 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>dbj|AK174277.1| Ciona intestinalis cDNA, clone:cicl019o10, full insert sequence Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 406 ggaaccatggctggaggtgctgctgattgc 435 |||||||||||||| ||||||||||||||| Sbjct: 340 ggaaccatggctggtggtgctgctgattgc 369
>ref|XM_709731.1| Candida albicans SC5314 hypothetical protein (CaO19.2233), mRNA Length = 858 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 412 atggctggaggtgctgctgattgccaattttgg 444 |||||||| |||||||||||||| ||||||||| Sbjct: 352 atggctggtggtgctgctgattgtcaattttgg 384
>ref|XM_709671.1| Candida albicans SC5314 hypothetical protein (CaO19.9775), mRNA Length = 858 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 412 atggctggaggtgctgctgattgccaattttgg 444 |||||||| |||||||||||||| ||||||||| Sbjct: 352 atggctggtggtgctgctgattgtcaattttgg 384
>ref|XM_387062.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG06886.1) partial mRNA Length = 852 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 401 tgctgggaaccatggctggaggtgctgctgattgcca 437 ||||||||||||||||||| |||||||| || ||||| Sbjct: 326 tgctgggaaccatggctggtggtgctgcagactgcca 362
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcg 166 ||||||||||||||||||||||||| Sbjct: 145174 gccgccgccggcggcgacgacttcg 145198 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cgccgccggcggcgacgacttcgc 167 |||||||||||||| ||||||||| Sbjct: 145189 cgccgccggcggcggcgacttcgc 145166
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcg 166 ||||||||||||||||||||||||| Sbjct: 211652 gccgccgccggcggcgacgacttcg 211676 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cgccgccggcggcgacgacttcgc 167 |||||||||||||| ||||||||| Sbjct: 211667 cgccgccggcggcggcgacttcgc 211644
>gb|AY656247.1| Oryza sativa (japonica cultivar-group) 17.7 kDa low temperature induced protein mRNA, complete cds Length = 1043 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 334 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 381
>ref|XM_455453.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08228g predicted mRNA Length = 858 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 409 accatggctggaggtgctgctgattgccaattttgg 444 |||||||| || |||||||||||||| ||||||||| Sbjct: 346 accatggccggtggtgctgctgattgtcaattttgg 381
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 13258179 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 13258226 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 |||||||||||||| || ||||||||||||| Sbjct: 26129254 cgcggccgccgccgacgccgacgacttcgcc 26129224
>ref|XM_745627.1| Aspergillus fumigatus Af293 proteasome component Pre2 (Afu6g08310) partial mRNA Length = 891 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 404 tgggaaccatggctggaggtgctgctgattgccaat 439 |||| ||||||||||| |||||||| |||||||||| Sbjct: 371 tgggtaccatggctggtggtgctgcggattgccaat 406
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 409 accatggctggaggtgctgctgattgccaattttgg 444 |||||||| || |||||||||||||| ||||||||| Sbjct: 771090 accatggccggtggtgctgctgattgtcaattttgg 771055
>dbj|AB110172.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPB022 Length = 943 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 279 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 13254954 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 13255001 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 |||||||||||||| || ||||||||||||| Sbjct: 26220563 cgcggccgccgccgacgccgacgacttcgcc 26220533
>dbj|AK068753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E09, full insert sequence Length = 1292 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 509 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 556
>dbj|AK062176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D01, full insert sequence Length = 994 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 319 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 366
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgacttcgccggcctcttctccgccgacgcc 189 |||||||||| || ||||||| ||||||||||| || ||| ||||||| Sbjct: 61662 gccgccgccgacgacgacgacctcgccggcctcctccccgacgacgcc 61615
>ref|NM_189817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 570 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 ||||||||||| ||||||||||| ||||||| Sbjct: 106 cgcggccgccggcggcggcgacgtcttcgcc 76
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.12 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcg 166 ||||||||||||||||||| ||||| Sbjct: 1529432 gccgccgccggcggcgacgmcttcg 1529456 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cgccgccggcggcgacgacttcgc 167 |||||||||||||| ||||||||| Sbjct: 1529447 cgccgccggcggcggcgacttcgc 1529424
>ref|XM_537370.2| PREDICTED: Canis familiaris similar to proteasome beta 5 subunit (LOC480246), mRNA Length = 1081 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctgg 419 ||||| ||||||||| ||||||| ||||||||||| Sbjct: 358 gagatcaatccctacctgctgggcaccatggctgg 392
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 |||||||||||||| || ||||||||||||| Sbjct: 27296 cgcggccgccgccgacgccgacgacttcgcc 27326
>ref|NM_001037612.1| Bos taurus proteasome (prosome, macropain) subunit, beta type, 5 (PSMB5), mRNA Length = 1385 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 435 ||||| || |||||| ||||||| ||||||||||| ||||| || |||||| Sbjct: 637 gagatcaacccctacctgctgggcaccatggctgggggtgcagcggattgc 687
>gb|BC110039.1| Bos taurus cDNA clone MGC:134464 IMAGE:8048388, complete cds Length = 1385 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgc 435 ||||| || |||||| ||||||| ||||||||||| ||||| || |||||| Sbjct: 637 gagatcaacccctacctgctgggcaccatggctgggggtgcagcggattgc 687
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 ||||||||||| ||||||||||| ||||||| Sbjct: 25416076 cgcggccgccggcggcggcgacgtcttcgcc 25416046 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccgccgccggcggcgacgac 162 |||||||||||||||||||| Sbjct: 19474033 ccgccgccggcggcgacgac 19474052
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 ||||||||||| ||||||||||| ||||||| Sbjct: 109166 cgcggccgccggcggcggcgacgtcttcgcc 109136
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 ||||||||||| ||||||||||| ||||||| Sbjct: 39793 cgcggccgccggcggcggcgacgtcttcgcc 39763
>dbj|AK104971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H09, full insert sequence Length = 851 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 |||||||||||||| || ||||||||||||| Sbjct: 138 cgcggccgccgccgacgccgacgacttcgcc 108
>dbj|AK073152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011D07, full insert sequence Length = 826 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcgacgacttcgcc 168 |||||||||||||| || ||||||||||||| Sbjct: 169 cgcggccgccgccgacgccgacgacttcgcc 139
>ref|XM_483676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggc 171 ||||||||||||||||||||| ||||||| Sbjct: 574 gccgccgccggcggcgacgaccgcgccggc 603
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 gcggccgccgccggcggcgacg 160 |||||||||||||||||||||| Sbjct: 55093 gcggccgccgccggcggcgacg 55072
>gb|AY518886.1| Brassica napus putative proteasome 20S beta5 subunit mRNA, partial cds Length = 449 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggaggtgctgctgattgccaattttgg 444 ||||| ||||| || ||||| || || ||||||||||| |||||||| ||||||| ||| Sbjct: 49 gagatcaatccttatatgcttggtacaatggctggaggagctgctgaccgccaattctgg 108 Query: 445 ca 446 || Sbjct: 109 ca 110
>emb|CR734153.2|CNS0GT94 Tetraodon nigroviridis full-length cDNA Length = 585 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 333 gagatcaacccctacctgctgggcaccatggctggagg 370
>emb|CR733451.2|CNS0GSPM Tetraodon nigroviridis full-length cDNA Length = 1122 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 321 gagatcaacccctacctgctgggcaccatggctggagg 358
>emb|CR727187.1|CNS0GO1L Tetraodon nigroviridis full-length cDNA Length = 1046 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 279 gagatcaacccctacctgctgggcaccatggctggagg 316
>emb|CR726086.2|CNS0GN70 Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 327 gagatcaacccctacctgctgggcaccatggctggagg 364
>emb|CR724930.2|CNS0GMAW Tetraodon nigroviridis full-length cDNA Length = 1119 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 319 gagatcaacccctacctgctgggcaccatggctggagg 356
>emb|CR718720.2|CNS0GHIE Tetraodon nigroviridis full-length cDNA Length = 1110 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 313 gagatcaacccctacctgctgggcaccatggctggagg 350
>emb|CR687751.2|CNS0FTMB Tetraodon nigroviridis full-length cDNA Length = 1120 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 313 gagatcaacccctacctgctgggcaccatggctggagg 350
>emb|CR663774.2|CNS0FB50 Tetraodon nigroviridis full-length cDNA Length = 1111 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 308 gagatcaacccctacctgctgggcaccatggctggagg 345
>emb|CR659418.2|CNS0F7S0 Tetraodon nigroviridis full-length cDNA Length = 805 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 316 gagatcaacccctacctgctgggcaccatggctggagg 353
>emb|CR657851.2|CNS0F6KH Tetraodon nigroviridis full-length cDNA Length = 1102 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 gagattaatccctacatgctgggaaccatggctggagg 422 ||||| || |||||| ||||||| |||||||||||||| Sbjct: 314 gagatcaacccctacctgctgggcaccatggctggagg 351
>ref|XM_500920.1| Yarrowia lipolytica CLIB122, YALI0B15224g predicted mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tgctgggaaccatggctggagg 422 |||||||||||||||||||||| Sbjct: 326 tgctgggaaccatggctggagg 347
>gb|AF078727.2| Rangiferine herpesvirus 1 strain Salla 82 glycoprotein B gene, complete cds Length = 3065 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 ggcgcggccgccgccggcggcg 157 |||||||||||||||||||||| Sbjct: 490 ggcgcggccgccgccggcggcg 469
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgccg 193 |||||||||||||| ||||||||||| Sbjct: 137258 cggcctcttctccgacgacgccgccg 137283 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 cggcctcttctccgccgacgccgccg 193 |||||||||||||| ||||||||||| Sbjct: 107344 cggcctcttctccgacgacgccgccg 107319
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 gcggccgccgccggcggcgacg 160 |||||||||||||||||||||| Sbjct: 18657217 gcggccgccgccggcggcgacg 18657196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 15873079 cgcggccgccgccggcggcga 15873099 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cgccggcctcttctccgccg 184 |||||||||||||||||||| Sbjct: 16506739 cgccggcctcttctccgccg 16506720 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgc 191 ||||||||||||| |||||||||| Sbjct: 15290882 cggcctcttctcctccgacgccgc 15290905 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ggcgcggccgccgccggcggcgac 159 |||||||||||||||| ||||||| Sbjct: 14758386 ggcgcggccgccgccgccggcgac 14758409
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgacttcgccggc 171 ||||||||||||||||||||| ||||||| Sbjct: 27595578 gccgccgccggcggcgacgaccgcgccggc 27595549 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccgacgccgccggccagctcgc 203 ||||| |||||||||||||||||| Sbjct: 21591854 cgccgccgccgccggccagctcgc 21591831
>gb|AY772189.1| Oryza sativa (japonica cultivar-group) glucosamine-6-phosphate acetyltransferase (GNA1) mRNA, complete cds Length = 604 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 gcggccgccgccggcggcgacg 160 |||||||||||||||||||||| Sbjct: 38 gcggccgccgccggcggcgacg 59
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 310 ggcgtcatcgtcgccgccgactcccgggccagca 343 |||||| || ||||||||||||||||| |||||| Sbjct: 114282 ggcgtcgtcctcgccgccgactcccggaccagca 114249
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgccg 193 |||||||||||||| ||||||||||| Sbjct: 430 cggcctcttctccgacgacgccgccg 455
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgacttcgccggc 171 ||||||||||||||||||||| ||||||| Sbjct: 77868 gccgccgccggcggcgacgaccgcgccggc 77839
>dbj|AK105338.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F06, full insert sequence Length = 1246 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgacttcgccggc 171 ||||||||||||||||||||| ||||||| Sbjct: 727 gccgccgccggcggcgacgaccgcgccggc 756
>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full insert sequence Length = 999 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 310 ggcgtcatcgtcgccgccgactcccgggccagca 343 |||||| || ||||||||||||||||| |||||| Sbjct: 218 ggcgtcgtcctcgccgccgactcccggaccagca 251
>dbj|AK063214.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D10, full insert sequence Length = 737 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 gcggccgccgccggcggcgacg 160 |||||||||||||||||||||| Sbjct: 34 gcggccgccgccggcggcgacg 55
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tgctgggaaccatggctggagg 422 |||||||||||||||||||||| Sbjct: 2028054 tgctgggaaccatggctggagg 2028075
>gb|M34651.1|SH1PROIE Pseudorabies virus with upstream and downsteam sequences Length = 15141 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgccg 193 |||||||||||||| ||||||||||| Sbjct: 5682 cggcctcttctccgacgacgccgccg 5707
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 cggcctcttctccgccgacgccgccg 193 |||||||||||||| ||||||||||| Sbjct: 6634 cggcctcttctccgacgacgccgccg 6609
>gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, complete sequence Length = 210051 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 gctctccttcatcttcgacaagggc 312 |||||||||||||||| |||||||| Sbjct: 171205 gctctccttcatcttctacaagggc 171181
>ref|XM_475257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 990 gccgccgccggcggcgacgac 970
>ref|XM_464303.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 46 cgcggccgccgccggcggcga 26
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aaggggaccaccacgctctcc 294 ||||||||||||||||||||| Sbjct: 13188 aaggggaccaccacgctctcc 13168
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 147854 gccgccgccggcggcgacgac 147874
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcgacgac 162 ||||||||||||||| ||||||||| Sbjct: 110866 cgcggccgccgccggaggcgacgac 110890
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 gcgcggccgccgccggcggcg 157 ||||||||||||||||||||| Sbjct: 2555510 gcgcggccgccgccggcggcg 2555530
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcgacgac 162 ||||||||||||||| ||||||||| Sbjct: 10682 cgcggccgccgccggaggcgacgac 10706
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 2254109 gccgccgccggcggcgacgac 2254089
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 gcgcggccgccgccggcggcg 157 ||||||||||||||||||||| Sbjct: 3767782 gcgcggccgccgccggcggcg 3767802
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 90431 gccgccgccggcggcgacgac 90451
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 gcgcggccgccgccggcggcg 157 ||||||||||||||||||||| Sbjct: 3508120 gcgcggccgccgccggcggcg 3508140
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 1572791 gccgccgccggcggcgacgac 1572811
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcgacgac 162 ||||||||||||||| ||||||||| Sbjct: 17951200 cgcggccgccgccggaggcgacgac 17951224 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcggcga 158 |||||| ||||||||||||||||| Sbjct: 3350909 cggcgccgccgccgccggcggcga 3350932
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 20834630 gccgccgccggcggcgacgac 20834650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcggccgccgccggcggcga 158 |||||||||||||||||||| Sbjct: 27267022 gcggccgccgccggcggcga 27267041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggccgccgccggcggcgacg 160 |||||||||||||||||||| Sbjct: 3127478 ggccgccgccggcggcgacg 3127459
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 3955851 cgcggccgccgccggcggcga 3955871 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 22627001 gccgccgccggcggcgacga 22626982 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 22010677 cgcggccgccgccggcggcg 22010696 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 18105445 gccgccgccggcggcgacga 18105426
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 ggcgcggccgccgccggcggc 156 ||||||||||||||||||||| Sbjct: 1806099 ggcgcggccgccgccggcggc 1806119 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ccgccgacgccgccggccag 198 |||||||||||||||||||| Sbjct: 6701050 ccgccgacgccgccggccag 6701031 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggccgccgccggcggcgacg 160 |||||||||||||||||||| Sbjct: 3995151 ggccgccgccggcggcgacg 3995170
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 36205 cgcggccgccgccggcggcga 36225
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 2517 cgcggccgccgccggcggcga 2537
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 154322 cgcggccgccgccggcggcga 154342
>dbj|AK104973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B03, full insert sequence Length = 994 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 581 cgcggccgccgccggcggcga 601
>dbj|AK072558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I21, full insert sequence Length = 916 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcga 158 ||||||||||||||||||||| Sbjct: 594 cgcggccgccgccggcggcga 614
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cgacgccgccggccagctcgc 203 ||||||||||||||||||||| Sbjct: 1433873 cgacgccgccggccagctcgc 1433853
>dbj|AK067448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107N09, full insert sequence Length = 843 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacgac 162 ||||||||||||||||||||| Sbjct: 509 gccgccgccggcggcgacgac 489
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcgacgac 162 ||||||||||||||| ||||||||| Sbjct: 18043991 cgcggccgccgccggaggcgacgac 18044015 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcggcga 158 |||||| ||||||||||||||||| Sbjct: 3359614 cggcgccgccgccgccggcggcga 3359637
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aaggggaccaccacgctctcc 294 ||||||||||||||||||||| Sbjct: 193548 aaggggaccaccacgctctcc 193528
>ref|XM_482642.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccgacgccgccggccagctcgc 203 ||||| |||||||||||||||||| Sbjct: 181 cgccgccgccgccggccagctcgc 158
>ref|XM_466433.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 299 gccgccgccggcggcgacga 280
>gb|DQ214027.1| Taeniopygia guttata clone 0058P0034B02 ankyrin-like protein variant 2-like mRNA, complete sequence Length = 1038 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 578 ggccagcatgggcggctaca 597
>gb|DQ214026.1| Taeniopygia guttata clone 0058P0001C03 ankyrin-like protein variant 2-like mRNA, complete sequence Length = 1038 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 578 ggccagcatgggcggctaca 597
>gb|DQ214025.1| Taeniopygia guttata clone 0058P0045H05 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>gb|DQ214024.1| Taeniopygia guttata clone 0058P0016G03 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>gb|DQ214023.1| Taeniopygia guttata clone 0058P0052B06 ankyrin-like protein variant 1-like mRNA, complete sequence Length = 1085 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 614 ggccagcatgggcggctaca 633
>ref|XM_466373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 63 cgcggccgccgccggcggcg 44
>ref|XM_465886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 498 gccgccgccggcggcgacga 479
>ref|NM_196945.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBa0079L16.3), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 220 cgcggccgccgccggcggcg 201
>ref|XM_478359.1| Oryza sativa (japonica cultivar-group), mRNA Length = 489 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccgccgccggcggcgacgac 162 |||||||||||||||||||| Sbjct: 325 ccgccgccggcggcgacgac 344
>gb|BT017486.1| Zea mays clone EL01N0412G05.c mRNA sequence Length = 1255 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cttctccgccgacgccgccg 193 |||||||||||||||||||| Sbjct: 98 cttctccgccgacgccgccg 79
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggccgccgccggcggcgacg 160 |||||||||||||||||||| Sbjct: 5195 ggccgccgccggcggcgacg 5176
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggccgccgccggcggcgacg 160 |||||||||||||||||||| Sbjct: 114722 ggccgccgccggcggcgacg 114703
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cggcgcggccgccgccggcggcga 158 |||||| ||||||||||||||||| Sbjct: 63385 cggcgccgccgccgccggcggcga 63362
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gcggccgccgccggcggcga 158 |||||||||||||||||||| Sbjct: 141990 gcggccgccgccggcggcga 142009
>ref|XM_369576.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05888.4) partial mRNA Length = 1200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgccgccggcggcgacgact 163 |||||||||||||||||||| Sbjct: 78 cgccgccggcggcgacgact 97
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 acttcggcgcggccgccgcc 150 |||||||||||||||||||| Sbjct: 806053 acttcggcgcggccgccgcc 806072
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggcgtcatcgtcgccgccga 329 |||||||||||||||||||| Sbjct: 2726293 ggcgtcatcgtcgccgccga 2726312
>ref|XM_859995.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 6 (LOC476662), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 570 ggccagcatgggcggctaca 589
>ref|XM_859974.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 5 (LOC476662), mRNA Length = 975 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 525 ggccagcatgggcggctaca 544
>ref|XM_859956.1| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 4 (LOC476662), mRNA Length = 870 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 420 ggccagcatgggcggctaca 439
>ref|XM_533866.2| PREDICTED: Canis familiaris similar to regulatory factor X-associated ankyrin-containing protein isoform b, transcript variant 1 (LOC476662), mRNA Length = 939 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggccagcatgggcggctaca 355 |||||||||||||||||||| Sbjct: 489 ggccagcatgggcggctaca 508
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgccggcctcttctccgccg 184 |||||||||||||||||||| Sbjct: 2314286 cgccggcctcttctccgccg 2314305
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 gcgcggccgccgccggcggcgacg 160 |||||||||||||||||| ||||| Sbjct: 289748 gcgcggccgccgccggcgtcgacg 289725
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 123134 gccgccgccggcggcgacga 123115
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgatccccaacctctccgcc 120 |||||||||||||||||||| Sbjct: 58084 tgatccccaacctctccgcc 58065
>emb|BX469917.7| Zebrafish DNA sequence from clone DKEYP-22B2 in linkage group 8, complete sequence Length = 71299 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 aaactgtgagaaaaatcatcgaga 388 ||||||||||||||||||| |||| Sbjct: 51125 aaactgtgagaaaaatcatagaga 51148
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcggcgcggccgccgccggcggcg 157 ||||| |||||||||||||||||| Sbjct: 42416 tcggcccggccgccgccggcggcg 42393
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ctccgccgacgccgccggcc 196 |||||||||||||||||||| Sbjct: 3631226 ctccgccgacgccgccggcc 3631245 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 2311947 gccgccgccggcggcgacga 2311966
>gb|AE011860.1| Xanthomonas axonopodis pv. citri str. 306, section 238 of 469 of the complete genome Length = 12040 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cggcggcgacgacttcgccg 169 |||||||||||||||||||| Sbjct: 2075 cggcggcgacgacttcgccg 2094
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 cgccggcggcgacgacttcgccgg 170 ||||||||||||||||| |||||| Sbjct: 3109805 cgccggcggcgacgactgcgccgg 3109782 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ggcggcgacgacttcgccggcctc 174 |||||||||||||||||| ||||| Sbjct: 309601 ggcggcgacgacttcgcccgcctc 309624
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 542552 gccgccgccggcggcgacga 542533
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 3836566 gccgccgccggcggcgacga 3836547 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ctccgccgacgccgccggcc 196 |||||||||||||||||||| Sbjct: 2300684 ctccgccgacgccgccggcc 2300665
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 acttcggcgcggccgccgccggcg 154 |||||||||||||||| ||||||| Sbjct: 2415208 acttcggcgcggccgctgccggcg 2415185
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgatccccaacctctccgcc 120 |||||||||||||||||||| Sbjct: 27789414 tgatccccaacctctccgcc 27789395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 16834537 cgcggccgccgccggcggcg 16834556
>gb|AC069513.28| Homo sapiens 3 BAC RP11-171N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174097 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tcgccggcctcttctccgcc 183 |||||||||||||||||||| Sbjct: 63815 tcgccggcctcttctccgcc 63834
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gccgacgccgccggccagctcgcc 204 |||||||| ||||||||||||||| Sbjct: 144301 gccgacgctgccggccagctcgcc 144278
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 18989 cgcggccgccgccggcggcg 19008
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 4031942 cgcggccgccgccggcggcg 4031923 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcg 154 |||||||||||||||||||| Sbjct: 2260212 cggcgcggccgccgccggcg 2260231
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccgccgccggcggcgacgac 162 |||||||||||||||||||| Sbjct: 163571 ccgccgccggcggcgacgac 163590
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 59299 cgcggccgccgccggcggcg 59318
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ggcgcggccgccgccggcggcgac 159 ||||||||||||| |||||||||| Sbjct: 991592 ggcgcggccgccgtcggcggcgac 991615
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cgacgccgccggccagctcg 202 |||||||||||||||||||| Sbjct: 3808224 cgacgccgccggccagctcg 3808205
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccgacgccgccggccagctcgc 203 |||| ||||||||||||||||||| Sbjct: 69304 cgcccacgccgccggccagctcgc 69281
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cgccggcctcttctccgccg 184 |||||||||||||||||||| Sbjct: 38964 cgccggcctcttctccgccg 38945
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ggcgcggccgccgccggcggcgac 159 |||||||||||||||| ||||||| Sbjct: 43775 ggcgcggccgccgccgccggcgac 43798
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgc 191 ||||||||||||| |||||||||| Sbjct: 184858 cggcctcttctcctccgacgccgc 184881
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgc 191 ||||||||||||| |||||||||| Sbjct: 70071 cggcctcttctcctccgacgccgc 70094
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ccgccgccggcggcgacgac 162 |||||||||||||||||||| Sbjct: 17377 ccgccgccggcggcgacgac 17396
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 28846 gccgccgccggcggcgacga 28827
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gccgccgccggcggcgacga 161 |||||||||||||||||||| Sbjct: 74812 gccgccgccggcggcgacga 74793
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cgccgacgccgccggccagctcgc 203 ||||| |||||||||||||||||| Sbjct: 52028 cgccgccgccgccggccagctcgc 52005
>dbj|AK121166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080J06, full insert sequence Length = 3462 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 2894 cgcggccgccgccggcggcg 2913
>dbj|AK120833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P07, full insert sequence Length = 1647 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cgccggcctcttctccgccg 184 |||||||||||||||||||| Sbjct: 362 cgccggcctcttctccgccg 381
>dbj|AK120024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C07, full insert sequence Length = 1568 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 cggcctcttctccgccgacgccgc 191 ||||||||||||| |||||||||| Sbjct: 260 cggcctcttctcctccgacgccgc 283
>dbj|AK119462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E11, full insert sequence Length = 2513 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggccgccgccggcggcgacg 160 |||||||||||||||||||| Sbjct: 222 ggccgccgccggcggcgacg 241
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gcggccgccgccggcggcga 158 |||||||||||||||||||| Sbjct: 248 gcggccgccgccggcggcga 229
>dbj|AK107512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E12, full insert sequence Length = 1901 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cggcgcggccgccgccggcggcga 158 |||||| ||||||||||||||||| Sbjct: 378 cggcgccgccgccgccggcggcga 355
>emb|AJ328366.1|HSA328366 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-4AC7RS Length = 697 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ctccgccgacgccgccggcc 196 |||||||||||||||||||| Sbjct: 164 ctccgccgacgccgccggcc 183
>dbj|AK069500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H01, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ggcgcggccgccgccggcggcgac 159 |||||||||||||||| ||||||| Sbjct: 458 ggcgcggccgccgccgccggcgac 435
>dbj|AK066147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B11, full insert sequence Length = 3362 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 2996 cgcggccgccgccggcggcg 3015
>dbj|AK065261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J21, full insert sequence Length = 1430 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cgccgacgccgccggccagctcgc 203 |||| ||||||||||||||||||| Sbjct: 887 cgcccacgccgccggccagctcgc 910
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcggcgacgac 162 ||||| ||||| |||||||||||||||| Sbjct: 25278 cggcggggccggcgccggcggcgacgac 25305
>emb|AJ430034.1|HSA430034 Homo sapiens partial MUC4 gene for mucin 4, exons 5-25 Length = 25773 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tcgccggcctcttctccgcc 183 |||||||||||||||||||| Sbjct: 10357 tcgccggcctcttctccgcc 10376
>gb|AF080002.1|AF080002 Heliobacillus mobilis exopolyphosphatase Ppx (ppx) gene, partial cds; cobyric acid synthase CobQ (cobQ), UDP-N-acetylmuramyl tripeptide synthetase MurC (murC), glutamyl tRNA reductase HemA (hemA), photosynthesis gene cluster, complete sequence, stage II sporulation protein E Sp2E (sp2E), cell cycle protein MesJ (mesJ), and ATP-dependent zinc metallopeptidase FtsH (ftsH) genes, complete cds; and nucleoside diphosphate kinase B NdkB (ndkB) gene, partial cds Length = 35618 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 accacttcggcgcggccgccgccg 151 ||||||||||||| |||||||||| Sbjct: 455 accacttcggcgctgccgccgccg 432
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcg 154 |||||||||||||||||||| Sbjct: 3284742 cggcgcggccgccgccggcg 3284761 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cggcgcggccgccgccggcg 154 |||||||||||||||||||| Sbjct: 2933236 cggcgcggccgccgccggcg 2933255
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 3292002 cgcggccgccgccggcggcg 3291983 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gcggccgccgccggcggcgacgac 162 ||||||| |||||||||||||||| Sbjct: 1254541 gcggccggcgccggcggcgacgac 1254518 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttcggcgcggccgccgccgg 152 |||||||||||||||||||| Sbjct: 1120271 ttcggcgcggccgccgccgg 1120290
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 134 tcggcgcggccgccgccggcggcgacgacttcgccggcct 173 ||||||||||| |||| ||||| |||||||| ||||||| Sbjct: 331877 tcggcgcggccttcgcccgcggccacgacttccccggcct 331838
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcggccgccgccggcggcg 157 |||||||||||||||||||| Sbjct: 16843577 cgcggccgccgccggcggcg 16843596
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cgccgccggcggcgacgacttcgc 167 |||||||||||||||||| ||||| Sbjct: 7890 cgccgccggcggcgacgatttcgc 7913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,585,907 Number of Sequences: 3902068 Number of extensions: 4585907 Number of successful extensions: 145704 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135398 Number of HSP's gapped (non-prelim): 10293 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
