ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DDFL1_MOUSE (Q5U464) Development and differentiation enhancing f... 31 1.9
2ZN509_HUMAN (Q6ZSB9) Zinc finger protein 509 30 3.2
3CATA_ACIGB (Q43984) Catechol 1,2-dioxygenase (EC 1.13.11.1) 29 9.3

>DDFL1_MOUSE (Q5U464) Development and differentiation enhancing factor-like 1|
          Length = 904

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 155 SGAGQVVTHPHVRHALEAEGGSKLTSTRHSL 63
           SG G V T  H R A+EA G S L+   H L
Sbjct: 65  SGLGHVETEEHYREAVEALGNSHLSQNSHEL 95



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>ZN509_HUMAN (Q6ZSB9) Zinc finger protein 509|
          Length = 765

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 1  TTSCHRPQQLHSSKQRRQGSLSECLVLV 84
          T SCH  QQLH  +QR QG L +C+++V
Sbjct: 6  THSCHLLQQLH--EQRIQGLLCDCMLVV 31



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>CATA_ACIGB (Q43984) Catechol 1,2-dioxygenase (EC 1.13.11.1)|
          Length = 305

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
 Frame = -1

Query: 461 RAPERDHRAGRAGG-------PLLVPAAVEQVAVLPLEDGAEDGAV 345
           RA E D +AG  GG       PL V  A E V    ++DG+E   V
Sbjct: 85  RADEADAKAGITGGTPRTIEGPLYVAGAPESVGFARMDDGSESAHV 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,765,770
Number of Sequences: 219361
Number of extensions: 999051
Number of successful extensions: 3439
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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