ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29h04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 222 bits (112), Expect = 1e-54 Identities = 219/254 (86%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 |||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| Sbjct: 25560389 cccagttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcacca 25560330 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaatcgctcccgccaccc---tgccggct 298 ||||||||||||||||| |||||| | ||||||| |||||||||||||| |||||| Sbjct: 25560329 cctggctcaaggcgctctccttcgacatcgccaaccgctcccgccaccccgtcgccggcg 25560270 Query: 299 ccggcgcgcacccgctgctcaccacccacccgcaggacctcgtgccgttcctcgagctgc 358 |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 25560269 ccggcgaccacccgctgctcacgacccacccgcaggacctcgtgccgttcatcgagacgc 25560210 Query: 359 cccaccgcgacgtccacccggtcgccgccctggacgggctcccctccccgaggctcctct 418 | |||| || ||||||| || | ||||| |||| |||||| || |||||||| |||| Sbjct: 25560209 cattccgccacctccaccctctctctgccctcgacgcgctcccgtcaccgaggcttctct 25560150 Query: 419 ccacccacatgccg 432 |||||||| ||||| Sbjct: 25560149 ccacccacctgccg 25560136 Score = 145 bits (73), Expect = 2e-31 Identities = 175/209 (83%) Strand = Plus / Minus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccccaccgcgacgtccacccggtcgccgc 386 |||||| ||||| ||||||||| ||||| ||||| || | || ||||||| ||||||| Sbjct: 25528203 cccgcatgaccttgtgccgttcatcgaggtgcccttccaccacctccaccctctcgccgc 25528144 Query: 387 cctggacgggctcccctccccgaggctcctctccacccacatgccggcgccgctgctgcc 446 ||| |||| |||||||||||||||||| |||||||||||||||||| | | |||||| || Sbjct: 25528143 cctcgacgcgctcccctccccgaggctgctctccacccacatgccgccccagctgcttcc 25528084 Query: 447 cctgtccatctcggccctcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgt 506 || | | || | | |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 25528083 ccggcgcgtcgccgagctcggctgccgcatcgtctacctatgccgggagcccaaggacgt 25528024 Query: 507 gttcgtctccagctggcactacatgaaca 535 |||||||| |||||||||||||||| Sbjct: 25528023 cgtcgtctccctgtggcactacatgaaca 25527995 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 |||||||||||| |||||||||||| || |||||||||| | ||| ||||||||||||| Sbjct: 25528337 cccagttcgcgcggcgccccgacgatgtgctcctcgccacctacccaaagtgcggcacca 25528278 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaa 275 |||||||||||| |||| |||||||| ||||||| Sbjct: 25528277 cctggctcaaggtgctctccttcgccatcgccaa 25528244 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 ||||||||| ||| ||| ||||||||| |||||||||| | ||| ||||||||||||| Sbjct: 25558021 cccagttcgtgccacgcgacgacgacgtgctcctcgccacctacccaaagtgcggcacca 25557962 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaatcgctcccgccaccc 290 ||||||||||||||||| |||||||| ||||||| ||| ||||||||| Sbjct: 25557961 cctggctcaaggcgctctccttcgccatcgccaaccgccaccgccaccc 25557913 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 463 ctcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctccagctgg 522 |||||||||||| |||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 25560105 ctcggctgccgcatcgtctacctctgccgggagcccaaggacgtcgtcgtctccacatgg 25560046 Query: 523 cactacatgaaca 535 |||| |||||||| Sbjct: 25560045 cacttcatgaaca 25560033 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 ||||||||| ||||||||| ||||| ||| | |||||| ||| ||||| |||||||||| Sbjct: 10720143 cgcgccccggcgacgtcgtgctcgcgacgctgcccaaggccgggaccacgtggctcaagg 10720084 Query: 254 cgctcgccttcgcc 267 | ||||| |||||| Sbjct: 10720083 ccctcgcgttcgcc 10720070 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 464 tcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctccagctggc 523 |||| |||||| |||| |||||||| || |||||||||||||| || |||||| |||| Sbjct: 25557742 tcggttgccgcatcgtctacctgtgtcgagagcccaaggacgtcgtcatctccacgtggc 25557683 Query: 524 actacatgaaca 535 ||| |||||||| Sbjct: 25557682 acttcatgaaca 25557671 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||||||||| || Sbjct: 8458878 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgtt 8458937 Query: 264 cgccgtc 270 ||||||| Sbjct: 8458938 cgccgtc 8458944 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccc 360 |||||| ||||||||||||||| ||||||||||| Sbjct: 25557873 cccgcatgacctcgtgccgttcatcgagctgccc 25557840 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||| ||||| || Sbjct: 8468989 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgtt 8468930 Query: 264 cgcc 267 |||| Sbjct: 8468929 cgcc 8468926
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 222 bits (112), Expect = 1e-54 Identities = 219/254 (86%), Gaps = 3/254 (1%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 |||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||||| Sbjct: 47080 cccagttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcacca 47021 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaatcgctcccgccaccc---tgccggct 298 ||||||||||||||||| |||||| | ||||||| |||||||||||||| |||||| Sbjct: 47020 cctggctcaaggcgctctccttcgacatcgccaaccgctcccgccaccccgtcgccggcg 46961 Query: 299 ccggcgcgcacccgctgctcaccacccacccgcaggacctcgtgccgttcctcgagctgc 358 |||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 46960 ccggcgaccacccgctgctcacgacccacccgcaggacctcgtgccgttcatcgagacgc 46901 Query: 359 cccaccgcgacgtccacccggtcgccgccctggacgggctcccctccccgaggctcctct 418 | |||| || ||||||| || | ||||| |||| |||||| || |||||||| |||| Sbjct: 46900 cattccgccacctccaccctctctctgccctcgacgcgctcccgtcaccgaggcttctct 46841 Query: 419 ccacccacatgccg 432 |||||||| ||||| Sbjct: 46840 ccacccacctgccg 46827 Score = 145 bits (73), Expect = 2e-31 Identities = 175/209 (83%) Strand = Plus / Minus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccccaccgcgacgtccacccggtcgccgc 386 |||||| ||||| ||||||||| ||||| ||||| || | || ||||||| ||||||| Sbjct: 14894 cccgcatgaccttgtgccgttcatcgaggtgcccttccaccacctccaccctctcgccgc 14835 Query: 387 cctggacgggctcccctccccgaggctcctctccacccacatgccggcgccgctgctgcc 446 ||| |||| |||||||||||||||||| |||||||||||||||||| | | |||||| || Sbjct: 14834 cctcgacgcgctcccctccccgaggctgctctccacccacatgccgccccagctgcttcc 14775 Query: 447 cctgtccatctcggccctcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgt 506 || | | || | | |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 14774 ccggcgcgtcgccgagctcggctgccgcatcgtctacctatgccgggagcccaaggacgt 14715 Query: 507 gttcgtctccagctggcactacatgaaca 535 |||||||| |||||||||||||||| Sbjct: 14714 cgtcgtctccctgtggcactacatgaaca 14686 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 |||||||||||| |||||||||||| || |||||||||| | ||| ||||||||||||| Sbjct: 15028 cccagttcgcgcggcgccccgacgatgtgctcctcgccacctacccaaagtgcggcacca 14969 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaa 275 |||||||||||| |||| |||||||| ||||||| Sbjct: 14968 cctggctcaaggtgctctccttcgccatcgccaa 14935 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 ||||||||| ||| ||| ||||||||| |||||||||| | ||| ||||||||||||| Sbjct: 44712 cccagttcgtgccacgcgacgacgacgtgctcctcgccacctacccaaagtgcggcacca 44653 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaatcgctcccgccaccc 290 ||||||||||||||||| |||||||| ||||||| ||| ||||||||| Sbjct: 44652 cctggctcaaggcgctctccttcgccatcgccaaccgccaccgccaccc 44604 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 463 ctcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctccagctgg 522 |||||||||||| |||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 46796 ctcggctgccgcatcgtctacctctgccgggagcccaaggacgtcgtcgtctccacatgg 46737 Query: 523 cactacatgaaca 535 |||| |||||||| Sbjct: 46736 cacttcatgaaca 46724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 464 tcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctccagctggc 523 |||| |||||| |||| |||||||| || |||||||||||||| || |||||| |||| Sbjct: 44433 tcggttgccgcatcgtctacctgtgtcgagagcccaaggacgtcgtcatctccacgtggc 44374 Query: 524 actacatgaaca 535 ||| |||||||| Sbjct: 44373 acttcatgaaca 44362 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccc 360 |||||| ||||||||||||||| ||||||||||| Sbjct: 44564 cccgcatgacctcgtgccgttcatcgagctgccc 44531
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 145 bits (73), Expect = 2e-31 Identities = 175/209 (83%) Strand = Plus / Minus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccccaccgcgacgtccacccggtcgccgc 386 |||||| ||||| ||||||||| ||||| ||||| || | || ||||||| ||||||| Sbjct: 159519 cccgcatgaccttgtgccgttcatcgaggtgcccttccaccacctccaccctctcgccgc 159460 Query: 387 cctggacgggctcccctccccgaggctcctctccacccacatgccggcgccgctgctgcc 446 ||| |||| |||||||||||||||||| |||||||||||||||||| | | |||||| || Sbjct: 159459 cctcgacgcgctcccctccccgaggctgctctccacccacatgccgccccagctgcttcc 159400 Query: 447 cctgtccatctcggccctcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgt 506 || | | || | | |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 159399 ccggcgcgtcgccgagctcggctgccgcatcgtctacctatgccgggagcccaaggacgt 159340 Query: 507 gttcgtctccagctggcactacatgaaca 535 |||||||| |||||||||||||||| Sbjct: 159339 cgtcgtctccctgtggcactacatgaaca 159311 Score = 107 bits (54), Expect = 4e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 |||||||||||| |||||||||||| || |||||||||| | ||| ||||||||||||| Sbjct: 159653 cccagttcgcgcggcgccccgacgatgtgctcctcgccacctacccaaagtgcggcacca 159594 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaa 275 |||||||||||| |||| |||||||| ||||||| Sbjct: 159593 cctggctcaaggtgctctccttcgccatcgccaa 159560
>ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 182 cccagttcgcgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcacca 241 ||||||||| ||| ||| ||||||||| |||||||||| | ||| ||||||||||||| Sbjct: 179 cccagttcgtgccacgcgacgacgacgtgctcctcgccacctacccaaagtgcggcacca 238 Query: 242 cctggctcaaggcgctcgccttcgccgtcgccaatcgctcccgccaccc 290 ||||||||||||||||| |||||||| ||||||| ||| ||||||||| Sbjct: 239 cctggctcaaggcgctctccttcgccatcgccaaccgccaccgccaccc 287 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 464 tcggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctccagctggc 523 |||| |||||| |||| |||||||| || |||||||||||||| || |||||| |||| Sbjct: 458 tcggttgccgcatcgtctacctgtgtcgagagcccaaggacgtcgtcatctccacgtggc 517 Query: 524 actacatgaaca 535 ||| |||||||| Sbjct: 518 acttcatgaaca 529 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 327 cccgcaggacctcgtgccgttcctcgagctgccc 360 |||||| ||||||||||||||| ||||||||||| Sbjct: 327 cccgcatgacctcgtgccgttcatcgagctgccc 360
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 115779 cgacgtcttcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 115838 Query: 264 cgc 266 ||| Sbjct: 115839 cgc 115841 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 74313 cgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 74372 Query: 264 cgc 266 ||| Sbjct: 74373 cgc 74375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgc 266 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 83588 cccaagtccggcaccacctggctcaaggcgcttgccttcgc 83628 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 476 tcgtgtacctgtgccgggagcccaaggacgtgttcgtctcca 517 |||||||| | |||||||| |||||||||| ||||||||||| Sbjct: 116138 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctcca 116179
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 141772 cgacgtcttcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 141831 Query: 264 cgc 266 ||| Sbjct: 141832 cgc 141834 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 100306 cgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 100365 Query: 264 cgc 266 ||| Sbjct: 100366 cgc 100368 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgc 266 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 109581 cccaagtccggcaccacctggctcaaggcgcttgccttcgc 109621 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 476 tcgtgtacctgtgccgggagcccaaggacgtgttcgtctcca 517 |||||||| | |||||||| |||||||||| ||||||||||| Sbjct: 142131 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctcca 142172
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 17386997 cgacgtcttcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 17387056 Query: 264 cgc 266 ||| Sbjct: 17387057 cgc 17387059 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 17345382 cgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 17345441 Query: 264 cgc 266 ||| Sbjct: 17345442 cgc 17345444 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgc 266 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 17354657 cccaagtccggcaccacctggctcaaggcgcttgccttcgc 17354697 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 1892890 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 1892838 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 8623267 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 8623226 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 476 tcgtgtacctgtgccgggagcccaaggacgtgttcgtctcca 517 |||||||| | |||||||| |||||||||| ||||||||||| Sbjct: 17387356 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctcca 17387397 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||| |||| |||||||||| | ||||||| |||||||||||||| Sbjct: 1895036 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 1894991 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 1914512 ttccctaagtccggcaccacctggcttaaggcgctc 1914477 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 1892661 gtgtacctgtgccgggatcccaagga 1892636
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 223 cgacgtcttcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 282 Query: 264 cgc 266 ||| Sbjct: 283 cgc 285 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 476 tcgtgtacctgtgccgggagcccaaggacgtgttcgtctcca 517 |||||||| | |||||||| |||||||||| ||||||||||| Sbjct: 582 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctcca 623
>gb|AY108956.1| Zea mays PCO130274 mRNA sequence Length = 631 Score = 93.7 bits (47), Expect = 6e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 465 cggctgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctc 515 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 579 cggctgccgcgtcgtgtacctgtgccggcagcccaaggacgtgttcgtctc 629 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 200 ccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcg 259 |||||||| ||||||||||||| | || || ||||| ||||| ||||| |||||||| | Sbjct: 311 ccgacgacatcgtcctcgccacctacctgaaatgcgggaccacgtggctgaaggcgctgg 370 Query: 260 ccttcgcc 267 |||||||| Sbjct: 371 ccttcgcc 378
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 17480707 cgacgtcttcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 17480766 Query: 264 cgc 266 ||| Sbjct: 17480767 cgc 17480769 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 17439241 cgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 17439300 Query: 264 cgc 266 ||| Sbjct: 17439301 cgc 17439303 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgc 266 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 17448516 cccaagtccggcaccacctggctcaaggcgcttgccttcgc 17448556 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 1890611 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 1890559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 8694030 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 8693989 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 476 tcgtgtacctgtgccgggagcccaaggacgtgttcgtctcca 517 |||||||| | |||||||| |||||||||| ||||||||||| Sbjct: 17481066 tcgtgtacgtctgccgggaccccaaggacgcgttcgtctcca 17481107 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||| |||| |||||||||| | ||||||| |||||||||||||| Sbjct: 1892757 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 1892712 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 1912233 ttccctaagtccggcaccacctggcttaaggcgctc 1912198 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 1890382 gtgtacctgtgccgggatcccaagga 1890357
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 191 cgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 |||||||| |||||||||| ||||| |||| | |||||||||||||||||| ||||||| Sbjct: 24791808 cgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtggctca 24791867 Query: 251 aggcgctcgccttcgccg 268 ||||||| |||||||||| Sbjct: 24791868 aggcgctggccttcgccg 24791885 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 2550953 cgacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgtt 2550894 Query: 264 cgcc 267 |||| Sbjct: 2550893 cgcc 2550890 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 224 tccccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2542870 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 2542827 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2406825 cccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 2406784 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 24853002 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 24852961
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 191 cgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 |||||||| |||||||||| ||||| |||| | |||||||||||||||||| ||||||| Sbjct: 26259 cgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtggctca 26318 Query: 251 aggcgctcgccttcgccg 268 ||||||| |||||||||| Sbjct: 26319 aggcgctggccttcgccg 26336 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 87453 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 87412
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 191 cgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 |||||||| |||||||||| ||||| |||| | |||||||||||||||||| ||||||| Sbjct: 281 cgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcaccacgtggctca 340 Query: 251 aggcgctcgccttcgccg 268 ||||||| |||||||||| Sbjct: 341 aggcgctggccttcgccg 358
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 248 cgacgtcctcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgcctt 307 Query: 264 cgc 266 ||| Sbjct: 308 cgc 310
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 229 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 270 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 9822638 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 1822182 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 1822130 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||||||| ||||| Sbjct: 1842485 ttccctaagtccggcaccacctggctcaagacgctc 1842450 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 1821952 gtgtacctgtgccgggatcccaagga 1821927
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 229 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 270 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 311
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 229 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 270 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9822564 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 9822523 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 1822160 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 1822108 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||||||| ||||| Sbjct: 1842463 ttccctaagtccggcaccacctggctcaagacgctc 1842428 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 1821930 gtgtacctgtgccgggatcccaagga 1821905
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 229 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 270 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgccgtc 109832
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgccttcgccg 268 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 58708 tcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgccg 58764
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgccttcgccg 268 ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 21712688 tcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgccg 21712744
>ref|NM_183698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 227 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 270
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol 3-sulfotransferase (OSJNBb0038H12.7), mRNA Length = 1005 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 |||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 183 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 242 Query: 264 cgcc 267 |||| Sbjct: 243 cgcc 246
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 273 cgacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgtt 332 Query: 264 cgcc 267 |||| Sbjct: 333 cgcc 336
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 |||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 19395 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 19454 Query: 264 cgcc 267 |||| Sbjct: 19455 cgcc 19458
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 240 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 283
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 |||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 5904488 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 5904429 Query: 264 cgcc 267 |||| Sbjct: 5904428 cgcc 5904425
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 11687234 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 11687191
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 115933 cgacgtcgtcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgtt 115874 Query: 264 cgcc 267 |||| Sbjct: 115873 cgcc 115870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 224 tccccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 107850 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 107807
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 126358 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 126315
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 26402 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 26359
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 215 tcgccacgttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 299 tcgccaccttccccaagtgtggcaccacctggctcaaggcgctc 342
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 |||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 291 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 350 Query: 264 cgcc 267 |||| Sbjct: 351 cgcc 354
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 |||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||| Sbjct: 5905674 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 5905615 Query: 264 cgcc 267 |||| Sbjct: 5905614 cgcc 5905611
>ref|NM_186313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 209 cccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 168
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 109833 cccaagtgcggcaccacgtggctcaaggccctcgccttcgcc 109792
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 24546 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 24494 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||| |||| |||||||||| | ||||||| |||||||||||||| Sbjct: 26692 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 26647 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 46168 ttccctaagtccggcaccacctggcttaaggcgctc 46133 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 24317 gtgtacctgtgccgggatcccaagga 24292
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 110720 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 110668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 212 tcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||| |||| |||||||||| | ||||||| |||||||||||||| Sbjct: 112866 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 112821 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 132342 ttccctaagtccggcaccacctggcttaaggcgctc 132307 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 110491 gtgtacctgtgccgggatcccaagga 110466
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 16900 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 16848 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 223 ttccccaagtgcggcaccacctggctcaaggcgctc 258 ||||| |||| ||||||||||||||||||| ||||| Sbjct: 37203 ttccctaagtccggcaccacctggctcaagacgctc 37168 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 16670 gtgtacctgtgccgggatcccaagga 16645
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 205 gacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgct 257 |||||| || ||||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 18300 gacgtcttcatcgccaccttccccaagtccggcaccacatggctcaaggcgct 18352 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 gtgtacctgtgccgggagcccaagga 503 ||||||||||||||||| |||||||| Sbjct: 18530 gtgtacctgtgccgggatcccaagga 18555
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 469 tgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctc 515 ||||||||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 27986812 tgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 27986766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| |||||||||| | ||||||| |||| | || |||||||||||||||||||| Sbjct: 27987092 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 27987033 Query: 264 c 264 | Sbjct: 27987032 c 27987032 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 gacgacgtcgtcctcgccacgttccc 227 ||||||| |||||||||||||||||| Sbjct: 17024858 gacgacggcgtcctcgccacgttccc 17024883
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 469 tgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctc 515 ||||||||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 30474 tgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 30428 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| |||||||||| | ||||||| |||| | || |||||||||||||||||||| Sbjct: 30754 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 30695 Query: 264 c 264 | Sbjct: 30694 c 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 469 tgccgcgtcgtgtacctgtgccgggagcccaaggacgtgttcgtctc 515 ||||||||||| ||||||||||| || |||||||||| ||||||||| Sbjct: 114264 tgccgcgtcgtctacctgtgccgcgaccccaaggacgcgttcgtctc 114218 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| |||||||||| | ||||||| |||| | || |||||||||||||||||||| Sbjct: 114544 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 114485 Query: 264 c 264 | Sbjct: 114484 c 114484
>ref|XM_481221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 ||||||||| ||||||||| ||||| ||| | |||||| ||| ||||| |||||||||| Sbjct: 260 cgcgccccggcgacgtcgtgctcgcgacgctgcccaaggccgggaccacgtggctcaagg 319 Query: 254 cgctcgccttcgcc 267 | ||||| |||||| Sbjct: 320 ccctcgcgttcgcc 333
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 34433 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 34392
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 226 cccaagtgcggcaccacctggctcaaggcgctcgccttcgcc 267 ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 36634 cccaagtgcggcaccacgtggctcaaggccctggccttcgcc 36593
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 ||||||||| ||||||||| ||||| ||| | |||||| ||| ||||| |||||||||| Sbjct: 17275 cgcgccccggcgacgtcgtgctcgcgacgctgcccaaggccgggaccacgtggctcaagg 17216 Query: 254 cgctcgccttcgcc 267 | ||||| |||||| Sbjct: 17215 ccctcgcgttcgcc 17202
>gb|AY106554.1| Zea mays PCO133039 mRNA sequence Length = 474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 191 cgccgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccac 242 ||||||||||||||||||| ||||||| | | |||||||||||||||||| Sbjct: 275 cgccgcgccccgacgacgtgatcctcgcgagctaccccaagtgcggcaccac 326
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||||||||| || Sbjct: 309 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgtt 368 Query: 264 cgccgtc 270 ||||||| Sbjct: 369 cgccgtc 375
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 196 cgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 ||||||||||||||| || | |||| ||||||||||||||||||| ||||||| Sbjct: 7945072 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 7945126
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||||||||| || Sbjct: 74595 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcgctcgcgtt 74654 Query: 264 cgccgtc 270 ||||||| Sbjct: 74655 cgccgtc 74661 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||| ||||| || Sbjct: 84706 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgtt 84647 Query: 264 cgcc 267 |||| Sbjct: 84646 cgcc 84643
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 196 cgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 ||||||||||||||| || | |||| ||||||||||||||||||| ||||||| Sbjct: 52590 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 52644
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 196 cgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctca 250 ||||||||||||||| || | |||| ||||||||||||||||||| ||||||| Sbjct: 273 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 327
>ref|NM_114377.1| Arabidopsis thaliana sulfotransferase AT3G45080 mRNA, complete cds Length = 990 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 212 cgttccctaaatgcggcaccacttggctcaaggcgct 248
>ref|NM_114376.2| Arabidopsis thaliana sulfotransferase AT3G45070 mRNA, complete cds Length = 1067 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 197 cgttccctaaatgcggcaccacttggctcaaggcgct 233
>gb|BT015730.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 990 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 212 cgttccctaaatgcggcaccacttggctcaaggcgct 248
>gb|BT014993.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 1053 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 220 cgttccctaaatgcggcaccacttggctcaaggcgct 256
>gb|BT011733.1| Arabidopsis thaliana At3g45070 gene, complete cds Length = 972 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 197 cgttccctaaatgcggcaccacttggctcaaggcgct 233
>emb|AL353992.1|ATF14D17 Arabidopsis thaliana DNA chromosome 3, BAC clone F14D17 Length = 89214 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 81209 cgttccctaaatgcggcaccacttggctcaaggcgct 81173 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 78868 cgttccctaaatgcggcaccacttggctcaaggcgct 78832
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 4261 cgttccctaaatgcggcaccacttggctcaaggcgct 4225 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 221 cgttccccaagtgcggcaccacctggctcaaggcgct 257 ||||||| || ||||||||||| |||||||||||||| Sbjct: 1920 cgttccctaaatgcggcaccacttggctcaaggcgct 1884
>emb|BX470084.10| Mouse DNA sequence from clone RP23-239A15 on chromosome 11 Contains part of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL, complete sequence Length = 21540 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 ggaaggagacaaccaactcctgt 82 ||||||||||||||||||||||| Sbjct: 2494 ggaaggagacaaccaactcctgt 2472
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 aggaaggagacaaccaactcctg 81 ||||||||||||||||||||||| Sbjct: 93759 aggaaggagacaaccaactcctg 93737
>ref|XM_465720.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1299 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 gacgacgtcgtcctcgccacgttccc 227 ||||||| |||||||||||||||||| Sbjct: 1000 gacgacggcgtcctcgccacgttccc 1025
>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence Length = 194427 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 cagaggaaggagacaaccaactcctg 81 ||||||||||||| |||||||||||| Sbjct: 58758 cagaggaaggagagaaccaactcctg 58733
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 accgcgacgtccacccggtcgc 383 |||||||||||||||||||||| Sbjct: 296103 accgcgacgtccacccggtcgc 296124
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 gacgtcgtcctcgccacgttcc 226 |||||||||||||||||||||| Sbjct: 699716 gacgtcgtcctcgccacgttcc 699737
>gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, complete cds Length = 201605 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcctg 81 |||||||||||||||||||||| Sbjct: 65305 ggaaggagacaaccaactcctg 65326
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 gacgacgtcgtcctcgccacgttccc 227 ||||||| |||||||||||||||||| Sbjct: 6231 gacgacggcgtcctcgccacgttccc 6256
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 gacgacgtcgtcctcgccacgttccc 227 ||||||| |||||||||||||||||| Sbjct: 76114 gacgacggcgtcctcgccacgttccc 76139
>gb|AC164092.3| Mus musculus BAC clone RP23-366E4 from chromosome 9, complete sequence Length = 203636 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 cagaggaaggagacaaccaactcctg 81 ||||||||||||| |||||||||||| Sbjct: 187584 cagaggaaggagagaaccaactcctg 187559
>gb|AC167419.4| Mus musculus BAC clone RP24-359H20 from chromosome 5, complete sequence Length = 179790 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcctg 81 |||||||||||||||||||||| Sbjct: 106108 ggaaggagacaaccaactcctg 106129
>emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chromosome 2, complete sequence Length = 228870 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcctg 81 |||||||||||||||||||||| Sbjct: 153805 ggaaggagacaaccaactcctg 153826
>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 90964 gaaggagacaaccaactcctg 90944
>ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 |||||||| |||| || || ||||||| || ||||||| |||||| || ||| |||||| Sbjct: 215 cgcgcccctccgacatcatcgtcgccaccttgcccaagtccggcacgacgtggatcaagg 274 Query: 254 cgctc 258 ||||| Sbjct: 275 cgctc 279
>gb|AC122159.30| Mus musculus strain 129/Sv clone ct7-575j15 map 10, complete sequence Length = 183491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 173391 gaaggagacaaccaactcctg 173411
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 agaggaaggagacaaccaactcctg 81 |||||||||||| |||||||||||| Sbjct: 165626 agaggaaggagagaaccaactcctg 165650
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 13268 gaaggagacaaccaactcctg 13288
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 |||||||| |||| || || ||||||| || ||||||| |||||| || ||| |||||| Sbjct: 70682 cgcgcccctccgacatcatcgtcgccaccttgcccaagtccggcacgacgtggatcaagg 70741 Query: 254 cgctc 258 ||||| Sbjct: 70742 cgctc 70746
>gb|AE005899.1| Caulobacter crescentus CB15 section 225 of 359 of the complete genome Length = 11202 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gcgctcgccttcgccgtcgcc 273 ||||||||||||||||||||| Sbjct: 4985 gcgctcgccttcgccgtcgcc 5005
>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete sequence Length = 207424 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 152581 gaaggagacaaccaactcctg 152561
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 194 cgcgccccgacgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaagg 253 |||||||| |||| || || ||||||| || ||||||| |||||| || ||| |||||| Sbjct: 26294105 cgcgcccctccgacatcatcgtcgccaccttgcccaagtccggcacgacgtggatcaagg 26294164 Query: 254 cgctc 258 ||||| Sbjct: 26294165 cgctc 26294169 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 catgccggcgccgctgctgc 445 |||||||||||||||||||| Sbjct: 21250298 catgccggcgccgctgctgc 21250279
>gb|AC139777.3| Homo sapiens chromosome 5 clone RP11-1011D24, complete sequence Length = 169254 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 gggatgtggaagccattcttcctct 127 ||||||||| ||||||||||||||| Sbjct: 1693 gggatgtgggagccattcttcctct 1717
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 caaggcgctcgccttcgccgtcgcc 273 |||||||||||||||||||| |||| Sbjct: 2395242 caaggcgctcgccttcgccgacgcc 2395218
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 ccgaagaaggaagggatgtgg 111 ||||||||||||||||||||| Sbjct: 2393477 ccgaagaaggaagggatgtgg 2393457
>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence Length = 160247 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 agaggaaggagacaaccaactcctg 81 |||||||||||| |||||||||||| Sbjct: 88919 agaggaaggagagaaccaactcctg 88895
>emb|AL672263.13| Mouse DNA sequence from clone RP23-479M21 on chromosome X, complete sequence Length = 147014 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 81686 gaaggagacaaccaactcctg 81666
>gb|AC170752.2| Mus musculus BAC clone RP23-116B8 from chromosome 10, complete sequence Length = 194054 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctg 81 ||||||||||||||||||||| Sbjct: 59465 gaaggagacaaccaactcctg 59445
>ref|XM_480894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||| ||||| || Sbjct: 261 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgtt 320 Query: 264 cgcc 267 |||| Sbjct: 321 cgcc 324
>ref|XM_421185.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC423264), mRNA Length = 2065 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccgaggctcctctccaccca 425 |||||||||||||||||||| Sbjct: 432 ccgaggctcctctccaccca 413
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gccggcgccgctgctgcccctgtc 452 |||| ||||||||||||||||||| Sbjct: 188662 gccgccgccgctgctgcccctgtc 188685
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cgcgccccgacgacgtcgtc 213 |||||||||||||||||||| Sbjct: 674997 cgcgccccgacgacgtcgtc 674978
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcgcgccgcgccccgacgac 207 |||||||||||||||||||| Sbjct: 2274694 tcgcgccgcgccccgacgac 2274675
>gb|AC124453.3| Mus musculus BAC clone RP24-225A16 from chromosome 12, complete sequence Length = 184665 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctgtcc 84 |||||||| ||||||||||||||| Sbjct: 171146 gaaggagagaaccaactcctgtcc 171123
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cgaagaaggaagggatgtgg 111 |||||||||||||||||||| Sbjct: 6355921 cgaagaaggaagggatgtgg 6355902
>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence Length = 201510 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcctgtcc 84 |||||||| ||||||||||||||| Sbjct: 52844 gaaggagagaaccaactcctgtcc 52821
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 ccacccggtcgccgccctggacgg 395 |||||||||||||||||| ||||| Sbjct: 222176 ccacccggtcgccgccctcgacgg 222153
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 catgccggcgccgctgctgc 445 |||||||||||||||||||| Sbjct: 63772 catgccggcgccgctgctgc 63753
>gb|AC099615.6| Mus musculus chromosome 1, clone RP23-412G3, complete sequence Length = 204191 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 152865 ggaaggagacaaccaactcc 152884
>gb|AC124120.5| Mus musculus chromosome 1, clone RP24-64M13, complete sequence Length = 242227 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cagaggaaggagacaaccaactcc 79 ||||||||||||| |||||||||| Sbjct: 147367 cagaggaaggagagaaccaactcc 147344
>emb|AL603783.14| Human DNA sequence from clone RP11-216B13 on chromosome 6 Contains two CpG islands, complete sequence Length = 94482 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaagggatgtggaagcca 117 |||||||||||||||||||| Sbjct: 15527 aggaagggatgtggaagcca 15508
>gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, complete sequence Length = 199303 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cagaggaaggagacaaccaactcc 79 ||||||||||||| |||||||||| Sbjct: 54503 cagaggaaggagagaaccaactcc 54480
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcgcgccgcgccccgacgac 207 |||||||||||||||||||| Sbjct: 436105 tcgcgccgcgccccgacgac 436086
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gacgacgtcgtcctcgccac 221 |||||||||||||||||||| Sbjct: 281805 gacgacgtcgtcctcgccac 281824
>emb|CR762493.11| Zebrafish DNA sequence from clone DKEY-228B19 in linkage group 13, complete sequence Length = 168643 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaaggaagggatgtggaagc 115 |||||||||||||||||||| Sbjct: 147193 gaaggaagggatgtggaagc 147212
>emb|AL645938.9| Mouse DNA sequence from clone RP23-15E24 on chromosome 1 Contains the 5' end of a novel gene, complete sequence Length = 138851 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 77622 ggaaggagacaaccaactcc 77603
>emb|BX001068.7| Mouse DNA sequence from clone RP23-54E4 on chromosome 13 Contains the gene for a novel SCAN domain containing C2H2 type zinc finger protein, two novel genes (933017L02Rik, 492150E05Rik), the Skz1 gene for SCAN-KRAB-zinc finger gene 1, a ribosomal protein L29 (Rpl29) pseudogene, the Zfp96 gene for Zinc finger protein 96, the gene for olfactory receptor MOR256-16, the gene for a novel protein similar to plasma glutathione peroxidase Gpx3, the (pseudo)gene for a novel protein similar to ribosomal protein L29 (Rpl29) and the Gpx5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), complete sequence Length = 175880 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 30728 ggaaggagacaaccaactcc 30747
>gb|AC110871.6| Homo sapiens 3 BAC RP11-639B4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97110 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aggaagggatgtggaagcca 117 |||||||||||||||||||| Sbjct: 405 aggaagggatgtggaagcca 386
>gb|AC131158.2| Homo sapiens 3 BAC RP11-37O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 20001 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aggaagggatgtggaagcca 117 |||||||||||||||||||| Sbjct: 1518 aggaagggatgtggaagcca 1537
>gb|AC027250.8| Homo sapiens chromosome 8, clone RP11-793H4, complete sequence Length = 174466 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ctcctctccacccacatgcc 431 |||||||||||||||||||| Sbjct: 94729 ctcctctccacccacatgcc 94748
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cgccatggccgagaacaacc 46 |||||||||||||||||||| Sbjct: 419396 cgccatggccgagaacaacc 419377
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctcctctccacccacatgcc 431 |||||||||||||||||||| Sbjct: 7526 ctcctctccacccacatgcc 7507
>dbj|AK141586.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630035H22 product:Transcription repressor p66 homolog [Mus musculus], full insert sequence Length = 1938 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gccggcgccgctgctgcccctgtc 452 |||| ||||||||||||||||||| Sbjct: 37 gccgccgccgctgctgcccctgtc 60
>ref|NM_001029890.1| Mus musculus RIKEN cDNA 2700083E18 gene (2700083E18Rik), mRNA Length = 5333 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctggacgggctcccctcccc 407 |||||||||||||||||||| Sbjct: 2224 ctggacgggctcccctcccc 2243
>ref|XM_683880.1| PREDICTED: Danio rerio similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) (LOC560477), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaaggaagggatgtggaagc 115 |||||||||||||||||||| Sbjct: 1851 gaaggaagggatgtggaagc 1870
>gb|AC159818.2| Mus musculus BAC clone RP23-244M3 from chromosome 12, complete sequence Length = 169374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 107585 ggaaggagacaaccaactcc 107566
>dbj|AK015985.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930537H20 product:unclassifiable, full insert sequence Length = 1684 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 gccggcgccgctgctgcccctgtc 452 |||| ||||||||||||||||||| Sbjct: 766 gccgccgccgctgctgcccctgtc 743
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcgcgccgcgccccgacgac 207 |||||||||||||||||||| Sbjct: 1552327 tcgcgccgcgccccgacgac 1552346
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cgcgccgcgccccgacgacgtcgt 212 |||||||||||||| ||||||||| Sbjct: 43358 cgcgccgcgccccgccgacgtcgt 43381
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 429 gccggcgccgctgctgcccctgtc 452 |||| ||||||||||||||||||| Sbjct: 158924 gccgccgccgctgctgcccctgtc 158947
>ref|XM_215376.3| PREDICTED: Rattus norvegicus minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (predicted) (Mcm3ap_predicted), mRNA Length = 6006 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtggaagccattcttcctct 127 |||||||||||||||||||| Sbjct: 260 gtggaagccattcttcctct 279
>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gaggaaggagacaaccaactcctg 81 ||||||||||| |||||||||||| Sbjct: 199541 gaggaaggagagaaccaactcctg 199564
>emb|AL928793.13| Mouse DNA sequence from clone RP23-89M14 on chromosome 2, complete sequence Length = 238545 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gaaggagacaaccaactcct 80 |||||||||||||||||||| Sbjct: 82830 gaaggagacaaccaactcct 82811
>emb|AL807396.9| Mouse DNA sequence from clone RP23-105P9 on chromosome X, complete sequence Length = 127065 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 112521 ggaaggagacaaccaactcc 112502
>ref|XM_309708.2| Anopheles gambiae str. PEST ENSANGP00000012523 (ENSANGG00000010034), partial mRNA Length = 683 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 cacgttccccaagtgcggcaccacctgg 246 ||||| ||||||||| |||||||||||| Sbjct: 191 cacgtaccccaagtgtggcaccacctgg 218
>dbj|AK099021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F24, full insert sequence Length = 1209 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||| ||||| || Sbjct: 260 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgtt 319 Query: 264 cgcc 267 |||| Sbjct: 320 cgcc 323
>gb|AC125319.5| Mus musculus BAC clone RP23-472L3 from 5, complete sequence Length = 186202 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 cgcagaggaaggagacaaccaactcctg 81 ||||| ||||||||| |||||||||||| Sbjct: 146707 cgcagtggaaggagagaaccaactcctg 146734
>dbj|AK061204.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B05, full insert sequence Length = 1234 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 204 cgacgtcgtcctcgccacgttccccaagtgcggcaccacctggctcaaggcgctcgcctt 263 ||||||| ||||||||| ||||||||| || || || ||||||||||| ||||| || Sbjct: 258 cgacgtcctcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgtt 317 Query: 264 cgcc 267 |||| Sbjct: 318 cgcc 321
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcgcgccgcgccccgacgac 207 |||||||||||||||||||| Sbjct: 2546463 tcgcgccgcgccccgacgac 2546482
>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence Length = 217058 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctggacgggctcccctcccc 407 |||||||||||||||||||| Sbjct: 104358 ctggacgggctcccctcccc 104377
>emb|AL845283.4| Mouse DNA sequence from clone RP23-151F21 on chromosome 2, complete sequence Length = 178403 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 172076 ggaaggagacaaccaactcc 172095
>emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chromosome 3, complete sequence Length = 249405 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ggaaggagacaaccaactcc 79 |||||||||||||||||||| Sbjct: 97912 ggaaggagacaaccaactcc 97931
>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete sequence Length = 95219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gaggaaggagacaaccaact 77 |||||||||||||||||||| Sbjct: 52724 gaggaaggagacaaccaact 52743 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,473,864 Number of Sequences: 3902068 Number of extensions: 4473864 Number of successful extensions: 89723 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 87384 Number of HSP's gapped (non-prelim): 2336 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
