Clone Name | bart29h02 |
---|---|
Clone Library Name | barley_pub |
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 910 bits (459), Expect = 0.0 Identities = 468/471 (99%) Strand = Plus / Plus Query: 106 atgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 165 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgtgtggcatactggcagtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 60 Query: 166 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 120 Query: 226 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 180 Query: 286 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 240 Query: 346 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 300 Query: 406 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 360 Query: 466 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 420 Query: 526 ggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 421 ggtgtcacgtctctctacattggctggggaatcgatgggtcagtgtggata 471
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 785 bits (396), Expect = 0.0 Identities = 453/472 (95%) Strand = Plus / Plus Query: 105 catgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtgca 164 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 69 catgtgcggcatactagcggtgctggggtgcggcgacgagtcgcaggggaagagggtcca 128 Query: 165 tgtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcacca 224 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 129 cgtgctagagctctcgcgcaggctcaagcaccggggcccggactggagcggcctgcacca 188 Query: 225 ggtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcga 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 ggtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcga 248 Query: 285 ccagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaa 344 |||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||| Sbjct: 249 ccagccgctctacaacgaggacaagtccatcgccgttgccgtcaacggggaggtctacaa 308 Query: 345 ccatgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcga 404 |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 309 ccatgaggagcttcgggcacggctctccggacacaggttccggaccggcagtgactgcga 368 Query: 405 ggtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgt 464 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 369 ggtcatcgcccatctgtatgaggaatacggagaaagcttcattgacatgttggatggtgt 428 Query: 465 tttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccat 524 |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 429 tttctccttcgtgttacttgacgcacgagataacagcttcattgctgctcgtgatgccat 488 Query: 525 tggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 |||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 489 tggtgtcacgcctctctacattggctggggaattgatggttcagtgtggata 540
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 387 bits (195), Expect = e-104 Identities = 402/471 (85%) Strand = Plus / Plus Query: 106 atgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 165 |||||||||||||||||||||||||| |||| || || | ||||||||||| |||| Sbjct: 56 atgtgcggcatactggcggtgctgggctgcgctgatgacacccaggggaagagagtgcgc 115 Query: 166 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 225 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 116 gtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagcggcatgcaccag 175 Query: 226 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 285 || | |||| |||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct: 176 gttggcgactgctacctctcccaccagcgcctcgccattatcgaccctgcctctggcgac 235 Query: 286 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 345 ||||||||||||||||||||||||||| | | || | || || || |||||||||||| Sbjct: 236 cagccgctctacaacgaggacaagtccatcgtcgtcacagtgaatggagagatctacaac 295 Query: 346 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 405 ||||| ||||||||| | ||||||| ||||| |||| |||| ||||| ||||||||| Sbjct: 296 catgaacagctccgggcgcagctctcctcccacacgttcaggacaggcagcgactgcgag 355 Query: 406 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 465 |||||||| || ||||| ||||| ||||| || | |||||| |||||| |||||||||| Sbjct: 356 gtcatcgcacacctgtacgaggagcatggggagaacttcatcgacatgctggatggtgtc 415 Query: 466 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 525 ||||| ||||| ||||| || |||| || |||||||||||||||| |||||||||||| Sbjct: 416 ttctccttcgtcttgctcgatacacgcgacaacagcttcattgctgcacgtgatgccatt 475 Query: 526 ggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 || ||||| | ||||| |||||||||||||| ||||| || || |||||| Sbjct: 476 ggcgtcacacccctctatattggctggggaattgatgggtcggtatggata 526
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 387 bits (195), Expect = e-104 Identities = 402/471 (85%) Strand = Plus / Plus Query: 106 atgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 165 |||||||||||||||||||||||||| |||| || || | || |||||||| |||| Sbjct: 22 atgtgcggcatactggcggtgctgggctgcgctgatgacacccaagggaagagagtgcgc 81 Query: 166 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 225 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 82 gtgcttgagctctcgcgcaggctcaagcaccgcggccccgactggagcggcatgcaccag 141 Query: 226 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 285 || | |||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 142 gttggcgactgctacctctcccaccagcgcctcgccatcatcgaccctgcctctggcgac 201 Query: 286 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 345 ||||||||||||||||||||||||||| | | || | || || || |||||||||||| Sbjct: 202 cagccgctctacaacgaggacaagtccatcgtcgtcacagtgaatggagagatctacaac 261 Query: 346 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 405 ||||| ||||||||| | ||||||| ||||| |||| |||| ||||| ||||||||| Sbjct: 262 catgaacagctccgggcgcagctctcctcccacacgttcaggacaggcagcgactgcgag 321 Query: 406 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 465 |||||||| || ||||| ||||| ||||| || | |||||| |||||| |||||||||| Sbjct: 322 gtcatcgcacacctgtacgaggagcatggggagaacttcatcgacatgctggatggtgtc 381 Query: 466 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 525 ||||| ||||| ||||| || |||| || |||||||||||||||| |||||||||||| Sbjct: 382 ttctccttcgtcttgctcgatacacgcgacaacagcttcattgctgcacgtgatgccatt 441 Query: 526 ggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 || ||||| | ||||| |||||||||||||| ||||| || ||||||||| Sbjct: 442 ggcgtcacacccctctatattggctggggaattgatgggtcggtgtggata 492
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 355 bits (179), Expect = 1e-94 Identities = 398/471 (84%) Strand = Plus / Plus Query: 106 atgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtgcat 165 ||||| ||||||||||| |||||||| |||| ||| || | ||||||||||| |||| Sbjct: 72 atgtgtggcatactggcagtgctgggctgcgccgatgacacccaggggaagagagtgcgc 131 Query: 166 gtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcggcctgcaccag 225 |||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 132 gtgctcgagctctcgcgcaggctcaagcaccgcggccccgactggagtggcatgcaccag 191 Query: 226 gtcgccgacaactacctctgccaccagcgcctcgccatcatcgacccggcctccggcgac 285 |||| ||| |||||||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 192 gtcggtgactgctacctctcccaccagcgcctcgccatcatcgaccctgcctcaggcgac 251 Query: 286 cagccgctctacaacgaggacaagtccgttgctgttgccgtcaacggggagatctacaac 345 ||||| || |||||||||||||||||| | | || | || || || |||||||||||| Sbjct: 252 cagccactttacaacgaggacaagtccatcgtcgtcactgtgaatggagagatctacaac 311 Query: 346 catgaggagctccgggaacggctctccggccacaggttccggaccggcagtgactgcgag 405 ||||| ||||||||| | ||||||| ||||| ||| |||| ||||| ||||||||| Sbjct: 312 catgaacagctccgggcgcagctctcctcccacacattcaggacaggcagcgactgcgag 371 Query: 406 gtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgttggatggtgtt 465 |||||||| || ||||| ||||| ||||| || | ||||| |||||| |||||||||| Sbjct: 372 gtcatcgcacacctgtacgaggagcatggggagaatttcatcgacatgctggatggtgtc 431 Query: 466 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 525 ||||| ||||| ||||| ||| |||| || |||||||||||||||| |||||||||||| Sbjct: 432 ttctccttcgtcttgctcgacacacgcgacaacagcttcattgctgcccgtgatgccatt 491 Query: 526 ggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 |||||||| | || || ||||||||||||| ||||| || ||||||||| Sbjct: 492 ggtgtcacacccctgtatgttggctggggaattgatgggtcggtgtggata 542
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 394 agtgactgcgaggtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatg 453 ||||||||||| ||||| || ||||||||||| ||| |||||||| || | | ||| Sbjct: 535 agtgactgcgaagtcattgctcatctgtatgaagaatatggagaagagtttgtgaatatg 594 Query: 454 ttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgct 513 |||||||| | ||||| || ||| |||||||| | || ||| | || |||||||||||| Sbjct: 595 ttggatggaatgttctcttttgtgctgcttgacacccgtgataatagtttcattgctgct 654 Query: 514 cgtgatgccattggtgtcacgtctctctacattggctgggg 554 ||||||||||||||| | || |||| ||||| |||||||| Sbjct: 655 cgtgatgccattggtattactcctctttacatcggctgggg 695
>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.1 mRNA, complete cds Length = 2206 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 540 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 599 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 600 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 659 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 660 ctgtgtggata 670 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 391 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 450
>ref|NM_180332.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.2 mRNA, complete cds Length = 2299 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 540 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 599 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 600 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 659 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 660 ctgtgtggata 670 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 391 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 450
>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1) transcript variant AT3G47340.3 mRNA, complete cds Length = 2380 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 540 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 599 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 600 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 659 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 660 ctgtgtggata 670 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 391 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 450
>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 1786 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 341 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 400 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 401 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 460 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 461 ctgtgtggata 471 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 192 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 251
>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine synthetase (At3g47340) mRNA, complete cds Length = 2183 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 542 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 601 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 602 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 661 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 662 ctgtgtggata 672 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 393 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 452
>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8 Length = 87224 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 39532 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 39473 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 39472 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 39413 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 39412 ctgtgtggata 39402
>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds Length = 2123 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 537 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 596 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 597 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 656 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 657 ctgtgtggata 667 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 388 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 447
>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine synthetase mRNA, complete cds Length = 1755 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 446 ttgacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttca 505 |||| ||||||||||| | ||||| || |||||||| ||| |||||||| || |||| Sbjct: 341 ttgatatgttggatggaatattctcctttgtgttgctcgacacacgagataactctttca 400 Query: 506 ttgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggtt 565 | | ||||||||||| ||||||||||| || ||||||||||| |||||| | || || | Sbjct: 401 tggtggctcgtgatgcgattggtgtcacttcgctctacattggttggggactagacggat 460 Query: 566 cagtgtggata 576 | ||||||||| Sbjct: 461 ctgtgtggata 471 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 192 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 251
>gb|AF061740.1| Elaeagnus umbellata asparagine synthetase (AS) mRNA, complete cds Length = 2092 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 497 acagcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaa 556 |||||||||||| |||||||||||| || |||||||| || ||||| ||||| |||||| Sbjct: 484 acagcttcattgttgctcgtgatgctatcggtgtcacttccctctatattggttggggac 543 Query: 557 tcgatggttcagtgtggata 576 | ||||| ||| | |||||| Sbjct: 544 ttgatggctcaatttggata 563
>emb|BX824817.1|CNS0A4VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2052 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 466 ttctcgttcgtgttgcttgacgcacgagatcacagcttcattgctgctcgtgatgccatt 525 ||||| || |||||||| ||| |||||||| || ||||| | ||||||||||| ||| Sbjct: 539 ttctcctttgtgttgctcgacacacgagataactctttcatggtggctcgtgatgcgatt 598 Query: 526 ggtgtcacgtctctctacattggctggggaatcgatggttcagtgtggata 576 |||||||| || ||||||||||| |||||| | || || || ||||||||| Sbjct: 599 ggtgtcacttcgctctacattggttggggactagacggatctgtgtggata 649 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 297 caacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||| || ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 370 caacgaggacaagaccattgttgtcacggtgaacggagagatttataaccatgaggagct 429
>gb|DQ226727.1| Boechera divaricarpa isolate SLW-A-H06 mRNA sequence Length = 437 Score = 60.0 bits (30), Expect = 8e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 451 atgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttcattgct 510 ||||||||||| | ||||| || |||||||||||| || ||||| | |||||| | Sbjct: 30 atgttggatggaatcttctcctttgtgttgcttgacacaagagataattccttcatggtg 89 Query: 511 gctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggttcagtg 570 ||||||||||| ||||||||||| | ||||||||||| |||||| | || || || ||| Sbjct: 90 gctcgtgatgcgattggtgtcactccgctctacattggatggggattagacggatctgtg 149 Query: 571 tggata 576 |||||| Sbjct: 150 tggata 155
>gb|BT013473.1| Lycopersicon esculentum clone 132134R, mRNA sequence Length = 1923 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 412 gcccatctgtatgaggaacatggagaaagcttcattgacatgttggatgg 461 |||||||| ||||| ||| ||||||||| |||| |||||||||||||||| Sbjct: 373 gcccatctttatgaagaatatggagaaaacttcgttgacatgttggatgg 422 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 301 gaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgagga 353 ||||||||| || ||| |||||| || || || ||||||||||||||| |||| Sbjct: 262 gaggacaagaccattgttgttgcggtaaatggagagatctacaaccataagga 314
>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds Length = 2109 Score = 60.0 bits (30), Expect = 8e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 334 gagatctacaaccatgaggagctccgggaacggctctccggccacaggttccggaccggc 393 ||||| ||||||||||| |||||| || ||| ||| | ||||| |||||| ||||| Sbjct: 376 gagatttacaaccatgaagagctcaggaaacagctgcctaaccacaagttccgaaccgga 435 Query: 394 agtgactgcgaggtcatcgcccatctgtatgaggaacatggagaaa 439 |||||||| || ||||| || || ||||| |||||||||||||||| Sbjct: 436 agtgactgtgatgtcattgcacacctgtacgaggaacatggagaaa 481
>gb|AF005724.1| Sandersonia aurantiaca asparagine synthetase (SAND1) mRNA, complete cds Length = 2121 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 394 agtgactgcgaggtcatcgcccatctgtatgaggaacatggagaaagcttcat 446 |||||||| || || || || ||||||||||| |||||||||||||||||||| Sbjct: 331 agtgactgtgaagttattgctcatctgtatgaagaacatggagaaagcttcat 383 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 508 gctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggttca 567 |||||||| ||||| |||||||| || || | ||||||||||||||| ||||||| || Sbjct: 445 gctgctcgggatgcaattggtgttacacctttatacattggctggggactcgatggctct 504 Query: 568 gtgtggata 576 || |||||| Sbjct: 505 gtatggata 513
>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1) Length = 2053 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 418 ctgtatgaggaacatggagaaagcttcattgacatgttggatgg 461 |||||||||||||||||||||| ||| || |||||| ||||||| Sbjct: 411 ctgtatgaggaacatggagaaaactttatggacatgctggatgg 454
>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase Length = 2085 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 448 gacatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttcatt 507 |||||||||||||| | ||||| || |||||||| ||| || ||||| || ||||| Sbjct: 375 gacatgttggatggaatcttctcctttgtgttgctggacacaagagataactcattcatg 434 Query: 508 gctgctcgtgatgccattggtgtcacgtctctctacattggctgggga 555 | ||||||||| || |||||||||| || ||||||||||| |||||| Sbjct: 435 gttgctcgtgacgcggttggtgtcacttcgctctacattggttgggga 482 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 298 aacgaggacaagtccgttgctgttgccgtcaacggggagatctacaaccatgaggagct 356 ||||||||||||||| ||| ||| | || ||||| ||||| || |||||||||||||| Sbjct: 225 aacgaggacaagtccattgttgtcacggtgaacggagagatttataaccatgaggagct 283
>gb|AF488726.1| Securigera parviflora asparagine synthetase (As2) mRNA, partial cds Length = 1367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 418 ctgtatgaggaacatggagaaagcttcattgacatgttggatgg 461 ||||||||||| |||||||||| |||| | |||||||||||||| Sbjct: 313 ctgtatgaggagcatggagaaaacttcgtcgacatgttggatgg 356
>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 397 gactgcgaggtcatcgcccatctgtatgaggaacatggagaa 438 ||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 347 gactgtgaagtcatcgctcatctgtatgaggaacacggagaa 388 Score = 42.1 bits (21), Expect = 2.0 Identities = 90/113 (79%) Strand = Plus / Plus Query: 103 atcatgtgcggcatactggcggtgctggggtgcggcgacgagtcgcaggggaagagggtg 162 |||||||| || ||||| || ||||| || ||| ||| || || |||| ||||||||| Sbjct: 53 atcatgtgtgggatacttgcagtgctcggttgctccgatgactctcaggcgaagagggtt 112 Query: 163 catgtgctcgagctctcgcgcaggctcaagcaccgcggcccggactggagcgg 215 | || ||||||||||| |||||| | |||||| | ||||| || |||||||| Sbjct: 113 cgagttctcgagctctctcgcaggttgaagcacaggggcccagattggagcgg 165
>gb|AY208747.1| Securigera parviflora asparagine synthetase (AS2) gene, complete cds Length = 7074 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 420 gtatgaggaacatggagaaagcttcattgacatgttggatgg 461 ||||||||| |||||||||| |||| | |||||||||||||| Sbjct: 4204 gtatgaggagcatggagaaaacttcgtcgacatgttggatgg 4245
>gb|AF195231.1|AF195231 Pyrus pyrifolia strain Whangkeumbae asparagine synthetase (AS) mRNA, complete cds Length = 423 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 259 gccatcatcgacccggcctccggcgaccagccgctctacaacgaggacaagtccgttgct 318 |||||||| ||||| || || || || ||||| |||||||||||||||||||| ||| | Sbjct: 39 gccatcattgaccctgcttctggtgatcagcctctctacaacgaggacaagtcaattgtt 98 Query: 319 gttgccgtcaacggggagatctacaaccatgaggagct 356 || | || || || ||||| ||||||||||| ||||| Sbjct: 99 gtcacggtgaatggagagatttacaaccatgaagagct 136
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 250 cagcgcctcgccatcatcgacccggcctccggcgaccagccgctctacaacgaggac 306 ||||| ||||||||| || |||| |||||||||||||||||| ||||||| |||| Sbjct: 10095621 cagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcggac 10095565 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accggcagtgactgcgaggtcatc 411 |||||||| ||||||||||||||| Sbjct: 10095360 accggcagcgactgcgaggtcatc 10095337
>gb|AF263432.1| Helianthus annuus asparagine synthetase (HAS1.1) mRNA, complete cds Length = 2035 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 510 tgctcgtgatgccattggtgtcacgtctctctacattggctggggaatcgatggttc 566 |||||||||||| || || |||| || ||||||||||| |||||| |||||||||| Sbjct: 453 tgctcgtgatgctatcgggatcacttcgctctacattggttggggactcgatggttc 509
>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene) Length = 2110 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 449 acatgttggatggtgttttctcgttcgtgttgcttgacgcacgagatcacagcttcattg 508 ||||||||||||| | ||||| ||||| ||||||||| | || || || |||||||| | Sbjct: 433 acatgttggatggaatgttctctttcgttttgcttgacacgcgtgaccagagcttcatag 492 Query: 509 ctgctcgtgatgc 521 ||||||| ||||| Sbjct: 493 ctgctcgagatgc 505
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 250 cagcgcctcgccatcatcgacccggcctccggcgaccagccgctctacaacgaggac 306 ||||| ||||||||| || |||| |||||||||||||||||| ||||||| |||| Sbjct: 41242 cagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcggac 41186 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accggcagtgactgcgaggtcatc 411 |||||||| ||||||||||||||| Sbjct: 40981 accggcagcgactgcgaggtcatc 40958
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 250 cagcgcctcgccatcatcgacccggcctccggcgaccagccgctctacaacgaggac 306 ||||| ||||||||| || |||| |||||||||||||||||| ||||||| |||| Sbjct: 10093742 cagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcggac 10093686 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accggcagtgactgcgaggtcatc 411 |||||||| ||||||||||||||| Sbjct: 10093481 accggcagcgactgcgaggtcatc 10093458
>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2) Length = 2187 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 395 gtgactgcgaggtcatcgcccatctgtatgaggaacatggagaaagcttcattgacatgt 454 ||||||| || ||||| || || ||||||||||| |||||||||| ||| | |||||| Sbjct: 434 gtgactgtgatgtcattgcacacctgtatgaggagcatggagaaaactttgtggacatgc 493 Query: 455 tggatggt 462 |||||||| Sbjct: 494 tggatggt 501
>gb|AF190728.1| Helianthus annuus asparagine synthetase (HAS1) mRNA, complete cds Length = 1971 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 325 gtcaacggggagatctacaaccatgaggagctccgg 360 |||||||| ||||| |||||||| |||||||||||| Sbjct: 241 gtcaacggcgagatatacaaccacgaggagctccgg 276
>ref|XM_390110.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG09934.1) partial mRNA Length = 1740 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 322 gccgtcaacggggagatctacaaccat 348 ||||||||||| ||||||||||||||| Sbjct: 214 gccgtcaacggtgagatctacaaccat 240
>gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mRNA, complete cds Length = 1850 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 388 accggcagtgactgcgaggtcatcgcccatctgtatgaggaacatggagaa 438 ||||| || ||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 308 accggaagcgactgtgaagtgatcgcccatctttatgaagaacatggagaa 358
>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II Length = 2044 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 419 tgtatgaggaacatggagaaagcttcattgacatgttggatggtgttttctcgtt 473 |||| ||||||||||||||| |||| | |||||| |||||||| | |||||||| Sbjct: 333 tgtacgaggaacatggagaaggctttgtggacatgctggatggtatcttctcgtt 387
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 505 attgctgctcgtgatgccattggtgt 530 ||||||||| |||||||||||||||| Sbjct: 1245057 attgctgcttgtgatgccattggtgt 1245032
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 277 tccggcgaccagccgctctacaacgaggac 306 ||||||||||||||||| | |||||||||| Sbjct: 263 tccggcgaccagccgctgttcaacgaggac 292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 ggcagtgactgcgaggtcatc 411 ||||||||||||||||||||| Sbjct: 380 ggcagtgactgcgaggtcatc 400
>gb|AC097087.13| Rattus norvegicus BAC CH230-140P4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 166595 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 atgaggaacatggagaaagct 442 ||||||||||||||||||||| Sbjct: 27985 atgaggaacatggagaaagct 28005
>gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosome 18, complete sequence Length = 184463 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 atctgtatgaggaacatggagaaag 440 |||||||||||| |||||||||||| Sbjct: 71188 atctgtatgagggacatggagaaag 71164
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 cgccatcatcgacccggcctccggc 282 ||||||||||||||||||| ||||| Sbjct: 6622 cgccatcatcgacccggccaccggc 6598
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 cgccatcatcgacccggcctccggc 282 ||||||||||||||||||| ||||| Sbjct: 316779 cgccatcatcgacccggccaccggc 316755
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 ttgccgtcaacggggagatctacaaccat 348 ||||| ||||||||||||| ||||||||| Sbjct: 2638708 ttgccttcaacggggagatttacaaccat 2638680
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 atcgacccggcctccggcgaccagc 289 |||||||||||| |||||||||||| Sbjct: 2348601 atcgacccggccgccggcgaccagc 2348625
>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds Length = 2088 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 511 gctcgtgatgccattggtgtcacgtctctctacattggctgggga 555 |||||||| || |||||||||| || ||||||||||| |||||| Sbjct: 458 gctcgtgacgcggttggtgtcacttcgctctacattggttgggga 502
>ref|NM_121062.2| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.1 mRNA, complete cds Length = 2018 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 440 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 499 Query: 559 gatggttc 566 |||||||| Sbjct: 500 gatggttc 507
>ref|NM_001036787.1| Arabidopsis thaliana ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) AT5G10240 (ASN3) transcript variant AT5G10240.2 mRNA, complete cds Length = 2028 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 439 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 498 Query: 559 gatggttc 566 |||||||| Sbjct: 499 gatggttc 506
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3354 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggcctccggcgaccagccg 291 |||||||||||||||||||| Sbjct: 565 cggcctccggcgaccagccg 546
>gb|AE010309.1| Methanopyrus kandleri AV19 section 8 of 157 of the complete genome Length = 12442 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gccgtcaacggggagatctacaac 345 ||||| |||||||||||||||||| Sbjct: 12148 gccgtgaacggggagatctacaac 12125
>ref|XM_450574.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 caactacctctgccaccagcgcctcgcc 261 |||||||||| | ||||||||||||||| Sbjct: 108 caactacctccgtcaccagcgcctcgcc 135
>gb|AC102376.14| Mus musculus chromosome 18, clone RP23-314H11, complete sequence Length = 190153 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 agatctacaaccatgaggag 354 |||||||||||||||||||| Sbjct: 145025 agatctacaaccatgaggag 145044
>gb|AC162525.4| Mus musculus BAC clone RP23-188O11 from chromosome 17, complete sequence Length = 196013 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tgtatgaggaacatggagaaagct 442 ||||| |||||||||||||||||| Sbjct: 7853 tgtataaggaacatggagaaagct 7876
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggcctccggcgaccagccg 291 |||||||||||||||||||| Sbjct: 41165 cggcctccggcgaccagccg 41146
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tccgggaacggctctccggc 375 |||||||||||||||||||| Sbjct: 4260743 tccgggaacggctctccggc 4260762
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 caactacctctgccaccagc 253 |||||||||||||||||||| Sbjct: 69493 caactacctctgccaccagc 69474
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tcgccatcatcgacccggcc 276 |||||||||||||||||||| Sbjct: 1923437 tcgccatcatcgacccggcc 1923456
>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence Length = 200663 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggggaagagggtgcatgtgc 169 |||||||||||||||||||| Sbjct: 36350 ggggaagagggtgcatgtgc 36331
>ref|XM_751365.1| Ustilago maydis 521 hypothetical protein (UM00311.1) partial mRNA Length = 1905 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcaacggggagatctacaaccat 348 |||||||| ||||||||||||||| Sbjct: 232 gtcaacggtgagatctacaaccat 255
>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence Length = 206979 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 caactacctctgccaccagc 253 |||||||||||||||||||| Sbjct: 6114 caactacctctgccaccagc 6133
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ggggtgcggcgacgagtcgc 148 |||||||||||||||||||| Sbjct: 195983 ggggtgcggcgacgagtcgc 196002
>gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, complete sequence Length = 194925 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggggaagagggtgcatgtgc 169 |||||||||||||||||||| Sbjct: 180183 ggggaagagggtgcatgtgc 180164
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cggcctgcaccaggtcgccgacaa 236 |||||||| ||||||||||||||| Sbjct: 3748473 cggcctgctccaggtcgccgacaa 3748450
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggcctccggcgaccagccg 291 |||||||||||||||||||| Sbjct: 129380 cggcctccggcgaccagccg 129361
>gb|AC151277.3| Mus musculus BAC clone RP24-170B23 from chromosome 17, complete sequence Length = 146255 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tgtatgaggaacatggagaaagct 442 ||||| |||||||||||||||||| Sbjct: 91436 tgtataaggaacatggagaaagct 91459
>gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosome 12, complete sequence Length = 212532 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gtgcatgtgctcgagctctc 179 |||||||||||||||||||| Sbjct: 65643 gtgcatgtgctcgagctctc 65662
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 cgtcaacggggagatctacaacca 347 ||||||||| |||||||||||||| Sbjct: 989257 cgtcaacggcgagatctacaacca 989280
>gb|AF095452.1|AF095452 Arabidopsis thaliana asparagine synthetase (ASN3) mRNA, complete cds Length = 1986 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 394 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 453 Query: 559 gatggttc 566 |||||||| Sbjct: 454 gatggttc 461
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 caactacctctgccaccagcgcctcgcc 261 |||||||||| | ||||||||||||||| Sbjct: 9739249 caactacctccgtcaccagcgcctcgcc 9739222
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tcatcgacccggcctccggcgacc 286 |||||| ||||||||||||||||| Sbjct: 28269787 tcatcgtcccggcctccggcgacc 28269810
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cggcctccggcgaccagccg 291 |||||||||||||||||||| Sbjct: 4154686 cggcctccggcgaccagccg 4154667
>emb|BX830209.1|CNS09YW6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 399 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 458 Query: 559 gatggttc 566 |||||||| Sbjct: 459 gatggttc 466
>gb|BT005014.1| Arabidopsis thaliana clone U20709 putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 1768 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 394 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 453 Query: 559 gatggttc 566 |||||||| Sbjct: 454 gatggttc 461
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 320 ttgccgtcaacggggagatctacaacca 347 ||||||| ||||| |||||||||||||| Sbjct: 856842 ttgccgttaacggtgagatctacaacca 856815
>gb|BT003929.1| Arabidopsis thaliana clone RAFL15-17-K18 (R20709) putative asparagine synthetase ASN3 (At5g10240) mRNA, complete cds Length = 2026 Score = 40.1 bits (20), Expect = 7.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 499 agcttcattgctgctcgtgatgccattggtgtcacgtctctctacattggctggggaatc 558 ||||| |||||||| | |||||||||||| |||| | |||||||| || ||||| || Sbjct: 440 agctttattgctgcaagggatgccattggtatcactccactctacatcgggtggggtctc 499 Query: 559 gatggttc 566 |||||||| Sbjct: 500 gatggttc 507
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ccatcatcgacccggcctcc 279 |||||||||||||||||||| Sbjct: 5093282 ccatcatcgacccggcctcc 5093301
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tcatcgacccggcctccggcgacc 286 |||||| ||||||||||||||||| Sbjct: 67816 tcatcgtcccggcctccggcgacc 67839
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 caactacctctgccaccagcgcctcgcc 261 |||||||||| | ||||||||||||||| Sbjct: 11668 caactacctccgtcaccagcgcctcgcc 11641
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 caactacctctgccaccagcgcctcgcc 261 |||||||||| | ||||||||||||||| Sbjct: 179346 caactacctccgtcaccagcgcctcgcc 179319
>gb|AE005128.1| Halobacterium sp. NRC-1 section 159 of 170 of the complete genome Length = 11223 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gggaacggctctccggccac 378 |||||||||||||||||||| Sbjct: 8142 gggaacggctctccggccac 8123
>ref|NM_211205.1| Eremothecium gossypii AFR303Wp (AFR303W), mRNA Length = 1716 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 cgtcaacggggagatctacaacca 347 ||||||||| |||||||||||||| Sbjct: 216 cgtcaacggcgagatctacaacca 239
>dbj|AK058749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H07, full insert sequence Length = 1331 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tcatcgacccggcctccggcgacc 286 |||||| ||||||||||||||||| Sbjct: 648 tcatcgtcccggcctccggcgacc 671
>gb|AY104216.1| Zea mays PCO109946 mRNA sequence Length = 1750 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aacggggagatctacaacca 347 |||||||||||||||||||| Sbjct: 1445 aacggggagatctacaacca 1464
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 caactacctctgccaccagc 253 |||||||||||||||||||| Sbjct: 2626 caactacctctgccaccagc 2607
>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds Length = 1931 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 415 catctgtatgaggaacatggagaaagcttcattgacatgttggatggt 462 |||||||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 318 catctgtacgaggaatatggagaagactttgtggacatgttggatggt 365 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,639,635 Number of Sequences: 3902068 Number of extensions: 3639635 Number of successful extensions: 69746 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69031 Number of HSP's gapped (non-prelim): 702 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)