ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472261.1| Oryza sativa (japonica cultivar-group), predic... 40 1.7
2gb|AC151808.1| Homo sapiens chromosome X clone RP11-1148L6 map p... 40 1.7
3gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p... 40 1.7
4ref|NM_153052.1| Mus musculus granzyme N (Gzmn), mRNA 40 1.7
5ref|XM_752045.1| Ustilago maydis 521 hypothetical protein (UM009... 40 1.7
6gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosom... 40 1.7
7gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G... 40 1.7
8emb|AL772262.4| Human DNA sequence from clone RP11-444C24 on chr... 40 1.7
9emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4,... 40 1.7
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
11dbj|AB049454.2| Mus musculus GrN mRNA for granzyme N, complete cds 40 1.7
12dbj|AB100426.1| Mus musculus GzmN-2 mRNA for granzyme N-2, compl... 40 1.7
13gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, compl... 40 1.7
14emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chr... 40 1.7
15gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, comp... 38 6.7
16gb|BC106062.1| Homo sapiens hippocampus abundant transcript-like... 38 6.7
17gb|AC159322.2| Mus musculus BAC clone RP23-33M5 from chromosome ... 38 6.7
18gb|AC139293.4| Mus musculus BAC clone RP24-381N4 from chromosome... 38 6.7
19ref|NM_032558.2| Homo sapiens hippocampus abundant transcript-li... 38 6.7
20gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, com... 38 6.7
21gb|BC021093.1| Homo sapiens hippocampus abundant transcript-like... 38 6.7
22gb|AC115798.14| Mus musculus chromosome 8, clone RP23-406D18, co... 38 6.7
23gb|AC018541.7| Homo sapiens chromosome 8, clone RP11-108E14, com... 38 6.7
24emb|CR698871.2|CNS0G277 Tetraodon nigroviridis full-length cDNA 38 6.7
25gb|BC018395.1| Mus musculus hippocampus abundant transcript-like... 38 6.7
26gb|BC033469.1| Mus musculus hippocampus abundant transcript-like... 38 6.7
27emb|AL358232.19| Human DNA sequence from clone RP11-533K9 on chr... 38 6.7
28emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chr... 38 6.7
29emb|AL022476.2|HS323M22 Human DNA sequence from clone RP3-323M22... 38 6.7
30ref|NM_001011142.1| Xenopus tropicalis UDP-N-acetylglucosamine p... 38 6.7
31gb|BC065439.1| Danio rerio zgc:77712, mRNA (cDNA clone MGC:77712... 38 6.7
32emb|CR610965.1| full-length cDNA clone CS0DI058YA07 of Placenta ... 38 6.7
33dbj|AK027659.1| Homo sapiens cDNA FLJ14753 fis, clone NT2RP30031... 38 6.7
34gb|AC087183.9| Mus musculus Strain C57BL6/J Chromosome 8 RP23-31... 38 6.7
35gb|AC021955.11| Homo sapiens chromosome 8, clone RP11-238G17, co... 38 6.7
36dbj|AK146596.1| Mus musculus 16 days embryo heart cDNA, RIKEN fu... 38 6.7
37gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Ho... 38 6.7
38gb|AC157916.2| Mus musculus chromosome 19, clone RP24-330P23, co... 38 6.7
39gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosom... 38 6.7
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
41ref|NM_205684.1| Danio rerio zgc:77712 (zgc:77712), mRNA 38 6.7
42dbj|AK222836.1| Homo sapiens mRNA for hypothetical protein FLJ14... 38 6.7
43gb|AF255650.1|AF255650 Homo sapiens DC27 mRNA, complete cds 38 6.7
44ref|NM_133680.2| Mus musculus hippocampus abundant transcript-li... 38 6.7
45ref|XM_225093.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 38 6.7
46dbj|AK204989.1| Mus musculus cDNA, clone:Y1G0150E15, strand:minu... 38 6.7
47dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
48dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
49emb|BX648846.1|HSM808997 Homo sapiens mRNA; cDNA DKFZp686N18153 ... 38 6.7
50gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 38 6.7
51emb|CR848106.2| Xenopus tropicalis finished cDNA, clone TGas117b20 38 6.7
52emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-7... 38 6.7
53emb|CT009534.18| Mouse DNA sequence from clone RP23-106A16 on ch... 38 6.7
54gb|BC084497.1| Xenopus tropicalis UDP-N-acetylglucosamine pyroph... 38 6.7
55emb|AL832415.1|HSM803723 Homo sapiens mRNA; cDNA DKFZp667N1613 (... 38 6.7
56emb|AL929339.4| Human DNA sequence from clone RP11-266E11 on chr... 38 6.7

>ref|XM_472261.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1257

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gcgagagcgagagcggtggc 126
           ||||||||||||||||||||
Sbjct: 247 gcgagagcgagagcggtggc 266



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>gb|AC151808.1| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete
             sequence
          Length = 37971

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aggaaaccaagggggaaaac 92
             ||||||||||||||||||||
Sbjct: 13895 aggaaaccaagggggaaaac 13876



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>gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p11.23, complete
             sequence
          Length = 158454

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aggaaaccaagggggaaaac 92
             ||||||||||||||||||||
Sbjct: 24565 aggaaaccaagggggaaaac 24546



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>ref|NM_153052.1| Mus musculus granzyme N (Gzmn), mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  gggggaaaacgtccatcaat 102
           ||||||||||||||||||||
Sbjct: 542 gggggaaaacgtccatcaat 561



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>ref|XM_752045.1| Ustilago maydis 521 hypothetical protein (UM00991.1) partial mRNA
          Length = 2313

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  tggcggcgagagcgagagcg 121
            ||||||||||||||||||||
Sbjct: 2170 tggcggcgagagcgagagcg 2151



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>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence
          Length = 202404

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      cacacaaggcaagcaagcac 23
              ||||||||||||||||||||
Sbjct: 121893 cacacaaggcaagcaagcac 121912



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>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence
          Length = 228160

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     gggggaaaacgtccatcaat 102
              ||||||||||||||||||||
Sbjct: 106074 gggggaaaacgtccatcaat 106055



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>emb|AL772262.4| Human DNA sequence from clone RP11-444C24 on chromosome X, complete
             sequence
          Length = 147079

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aagaaatctctttcactagg 75
             ||||||||||||||||||||
Sbjct: 31034 aagaaatctctttcactagg 31015



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>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21,
             complete sequence
          Length = 143093

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   gcgagagcgagagcggtggc 126
             ||||||||||||||||||||
Sbjct: 87207 gcgagagcgagagcggtggc 87188



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 107      gcgagagcgagagcggtggc 126
                ||||||||||||||||||||
Sbjct: 18871297 gcgagagcgagagcggtggc 18871278



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>dbj|AB049454.2| Mus musculus GrN mRNA for granzyme N, complete cds
          Length = 975

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  gggggaaaacgtccatcaat 102
           ||||||||||||||||||||
Sbjct: 545 gggggaaaacgtccatcaat 564



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>dbj|AB100426.1| Mus musculus GzmN-2 mRNA for granzyme N-2, complete cds
          Length = 1006

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  gggggaaaacgtccatcaat 102
           ||||||||||||||||||||
Sbjct: 545 gggggaaaacgtccatcaat 564



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>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence
          Length = 136754

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gggggaaaacgtccatcaat 102
             ||||||||||||||||||||
Sbjct: 25171 gggggaaaacgtccatcaat 25152



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>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete
             sequence
          Length = 215366

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     cacacaaggcaagcaagcac 23
             ||||||||||||||||||||
Sbjct: 46312 cacacaaggcaagcaagcac 46331



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>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence
          Length = 174365

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     agctagctccaagcctcca 47
              |||||||||||||||||||
Sbjct: 130382 agctagctccaagcctcca 130364



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>gb|BC106062.1| Homo sapiens hippocampus abundant transcript-like 1, mRNA (cDNA clone
            MGC:117350 IMAGE:6162855), complete cds
          Length = 3049

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1057 gtggctgccatgtccagca 1075



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>gb|AC159322.2| Mus musculus BAC clone RP23-33M5 from chromosome 8, complete sequence
          Length = 225520

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 75     gaaaccaagggggaaaacgtcca 97
              |||||||||||||||||| ||||
Sbjct: 105308 gaaaccaagggggaaaacatcca 105286



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>gb|AC139293.4| Mus musculus BAC clone RP24-381N4 from chromosome 8, complete sequence
          Length = 161248

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     caagggggaaaacgtccat 98
              |||||||||||||||||||
Sbjct: 136470 caagggggaaaacgtccat 136488



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>ref|NM_032558.2| Homo sapiens hippocampus abundant transcript-like 1 (HIATL1), mRNA
          Length = 3312

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1320 gtggctgccatgtccagca 1338



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>gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, complete sequence
          Length = 192305

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    agctagctccaagcctcca 47
             |||||||||||||||||||
Sbjct: 27033 agctagctccaagcctcca 27015



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>gb|BC021093.1| Homo sapiens hippocampus abundant transcript-like 1, mRNA (cDNA
           clone IMAGE:3626757), partial cds
          Length = 1070

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 430 gtggctgccatgtccagca 448



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>gb|AC115798.14| Mus musculus chromosome 8, clone RP23-406D18, complete sequence
          Length = 225828

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     caagggggaaaacgtccat 98
              |||||||||||||||||||
Sbjct: 167087 caagggggaaaacgtccat 167069



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>gb|AC018541.7| Homo sapiens chromosome 8, clone RP11-108E14, complete sequence
          Length = 156674

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     acacaaggcaagcaagcac 23
             |||||||||||||||||||
Sbjct: 92732 acacaaggcaagcaagcac 92750



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>emb|CR698871.2|CNS0G277 Tetraodon nigroviridis full-length cDNA
          Length = 1199

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 111  gagcgagagcggtggctgc 129
            |||||||||||||||||||
Sbjct: 1110 gagcgagagcggtggctgc 1128



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>gb|BC018395.1| Mus musculus hippocampus abundant transcript-like 1, mRNA (cDNA
           clone IMAGE:3993056), complete cds
          Length = 2166

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 210 gtggctgccatgtccagca 228



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>gb|BC033469.1| Mus musculus hippocampus abundant transcript-like 1, mRNA (cDNA clone
            MGC:37092 IMAGE:4951631), complete cds
          Length = 3450

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1384 gtggctgccatgtccagca 1402



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>emb|AL358232.19| Human DNA sequence from clone RP11-533K9 on chromosome 9 Contains the
             3' end of a novel gene simlar to mouse hippocampus
             abundant gene transcript 1, a gene for a novel protein and
              a leishmanolysin-like (metallopeptidase M8 family)(LMLN)
             pseudogene, complete sequence
          Length = 114340

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 122   gtggctgccatgtccagca 140
             |||||||||||||||||||
Sbjct: 66571 gtggctgccatgtccagca 66553



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>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3 Contains
              the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2 gene for
              relaxin 2 (H2) (RLXH2), a  high-mobility group nucleosomal
              binding domain 2 (HMGN2) pseudogene, a  novel pseudogene,
              the gene for uncharacterized hematopoietic stem/progenitor
              cells protein (MDS030), a novel pseudogene (FLJ39176) and
              four CpG islands, complete sequence
          Length = 156592

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 106    ggcgagagcgagagcggtggctg 128
              |||||||||||||||||| ||||
Sbjct: 141049 ggcgagagcgagagcggtagctg 141071



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>emb|AL022476.2|HS323M22 Human DNA sequence from clone RP3-323M22 on chromosome 22, complete
              sequence
          Length = 194523

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      acaaggcaagcaagcacca 25
              |||||||||||||||||||
Sbjct: 111675 acaaggcaagcaagcacca 111693



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>ref|NM_001011142.1| Xenopus tropicalis UDP-N-acetylglucosamine pyrophosphorylase 1
            (uap1), mRNA
          Length = 2077

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   taggaaaccaagggggaaa 90
            |||||||||||||||||||
Sbjct: 1494 taggaaaccaagggggaaa 1476



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>gb|BC065439.1| Danio rerio zgc:77712, mRNA (cDNA clone MGC:77712 IMAGE:7000536),
           complete cds
          Length = 1957

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 119 gcggtggctgccatgtcca 137
           |||||||||||||||||||
Sbjct: 969 gcggtggctgccatgtcca 987



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>emb|CR610965.1| full-length cDNA clone CS0DI058YA07 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2728

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 786 gtggctgccatgtccagca 804



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>dbj|AK027659.1| Homo sapiens cDNA FLJ14753 fis, clone NT2RP3003101, weakly similar
           to Mouse mRNA for tetracycline transporter-like protein
          Length = 2593

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 625 gtggctgccatgtccagca 643



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>gb|AC087183.9| Mus musculus Strain C57BL6/J Chromosome 8 RP23-316J6, complete sequence
          Length = 187359

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 75     gaaaccaagggggaaaacgtcca 97
              |||||||||||||||||| ||||
Sbjct: 140740 gaaaccaagggggaaaacatcca 140718



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>gb|AC021955.11| Homo sapiens chromosome 8, clone RP11-238G17, complete sequence
          Length = 192139

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      acacaaggcaagcaagcac 23
              |||||||||||||||||||
Sbjct: 156773 acacaaggcaagcaagcac 156755



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>dbj|AK146596.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:I920030J17 product:Similar to hippocampus
            abundant gene transcript 1, full insert sequence
          Length = 3252

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1318 gtggctgccatgtccagca 1336



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>gb|AC131405.5| Rattus norvegicus  BAC CH230-179I7 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 217197

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    agagcggtggctgccatgt 134
              |||||||||||||||||||
Sbjct: 124479 agagcggtggctgccatgt 124461



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>gb|AC157916.2| Mus musculus chromosome 19, clone RP24-330P23, complete sequence
          Length = 190666

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      cacacacaaggcaagcaagcacc 24
              ||||||| |||||||||||||||
Sbjct: 103472 cacacactaggcaagcaagcacc 103450



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>gb|AC154713.2| Mus musculus BAC clone RP23-129G17 from chromosome 13, complete sequence
          Length = 197815

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 122    gtggctgccatgtccagca 140
              |||||||||||||||||||
Sbjct: 138398 gtggctgccatgtccagca 138416



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 103     ggcggcgagagcgagagcg 121
               |||||||||||||||||||
Sbjct: 7987566 ggcggcgagagcgagagcg 7987548



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 56      aagaaatctctttcactag 74
               |||||||||||||||||||
Sbjct: 5202825 aagaaatctctttcactag 5202843



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>ref|NM_205684.1| Danio rerio zgc:77712 (zgc:77712), mRNA
          Length = 1957

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 119 gcggtggctgccatgtcca 137
           |||||||||||||||||||
Sbjct: 969 gcggtggctgccatgtcca 987



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>dbj|AK222836.1| Homo sapiens mRNA for hypothetical protein FLJ14753 variant, clone:
           HEP09988
          Length = 1128

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 635 gtggctgccatgtccagca 653



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>gb|AF255650.1|AF255650 Homo sapiens DC27 mRNA, complete cds
          Length = 2286

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 292 gtggctgccatgtccagca 310



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>ref|NM_133680.2| Mus musculus hippocampus abundant transcript-like 1 (Hiatl1), mRNA
          Length = 3450

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1384 gtggctgccatgtccagca 1402



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>ref|XM_225093.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730414C17
            (predicted) (LOC306687), mRNA
          Length = 3391

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  gtggctgccatgtccagca 140
            |||||||||||||||||||
Sbjct: 1354 gtggctgccatgtccagca 1372



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>dbj|AK204989.1| Mus musculus cDNA, clone:Y1G0150E15, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000066830, based on BLAT search
          Length = 379

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 16  gtggctgccatgtccagca 34



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>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0082C09
          Length = 160665

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 103    ggcggcgagagcgagagcg 121
              |||||||||||||||||||
Sbjct: 110981 ggcggcgagagcgagagcg 110963



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>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0437H03
          Length = 170173

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    aagaaatctctttcactag 74
             |||||||||||||||||||
Sbjct: 96278 aagaaatctctttcactag 96296



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>emb|BX648846.1|HSM808997 Homo sapiens mRNA; cDNA DKFZp686N18153 (from clone DKFZp686N18153)
          Length = 2733

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 734 gtggctgccatgtccagca 752



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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 94      tccatcaatggcggcgaga 112
               |||||||||||||||||||
Sbjct: 2260903 tccatcaatggcggcgaga 2260885



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>emb|CR848106.2| Xenopus tropicalis finished cDNA, clone TGas117b20
          Length = 2026

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   taggaaaccaagggggaaa 90
            |||||||||||||||||||
Sbjct: 1490 taggaaaccaagggggaaa 1472



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>emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-799P8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174788

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 9      aaggcaagcaagcaccatc 27
              |||||||||||||||||||
Sbjct: 132129 aaggcaagcaagcaccatc 132147



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>emb|CT009534.18| Mouse DNA sequence from clone RP23-106A16 on chromosome 17, complete
             sequence
          Length = 195558

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    aggaaaccaagggggaaaa 91
             |||||||||||||||||||
Sbjct: 73611 aggaaaccaagggggaaaa 73593



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>gb|BC084497.1| Xenopus tropicalis UDP-N-acetylglucosamine pyrophosphorylase 1, mRNA
            (cDNA clone MGC:89532 IMAGE:6993149), complete cds
          Length = 2077

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   taggaaaccaagggggaaa 90
            |||||||||||||||||||
Sbjct: 1494 taggaaaccaagggggaaa 1476



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>emb|AL832415.1|HSM803723 Homo sapiens mRNA; cDNA DKFZp667N1613 (from clone DKFZp667N1613)
          Length = 2312

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 gtggctgccatgtccagca 140
           |||||||||||||||||||
Sbjct: 190 gtggctgccatgtccagca 208



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>emb|AL929339.4| Human DNA sequence from clone RP11-266E11 on chromosome 9, complete
             sequence
          Length = 74915

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 122   gtggctgccatgtccagca 140
             |||||||||||||||||||
Sbjct: 13645 gtggctgccatgtccagca 13663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,126,471
Number of Sequences: 3902068
Number of extensions: 1126471
Number of successful extensions: 82702
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82492
Number of HSP's gapped (non-prelim): 210
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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