Clone Name | bart29g11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TNR21_MOUSE (Q9EPU5) Tumor necrosis factor receptor superfamily ... | 29 | 3.1 | 2 | TMOE_PSEME (Q00460) Toluene-4-monooxygenase system protein E (EC... | 28 | 6.9 |
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>TNR21_MOUSE (Q9EPU5) Tumor necrosis factor receptor superfamily member 21| precursor (TNFR-related death receptor 6) (Death receptor 6) Length = 655 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 225 DLTGAVVGCSVHVDCAGQGVELV 293 D+ +V+ C H DC GQ +E+V Sbjct: 178 DVPSSVMKCKAHTDCLGQNLEVV 200
>TMOE_PSEME (Q00460) Toluene-4-monooxygenase system protein E (EC 1.14.13.-)| Length = 326 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -1 Query: 127 GEGEDEGGLWKRRPFWM*LEESME 56 G GE E LW++ P W L E ME Sbjct: 180 GLGEHERELWEKEPGWQGLRELME 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.123 0.560 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,910,808 Number of Sequences: 219361 Number of extensions: 176596 Number of successful extensions: 348 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 348 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits)