Clone Name | bart29g06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 658 bits (332), Expect = 0.0 Identities = 456/497 (91%), Gaps = 4/497 (0%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 95 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 154 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 155 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 214 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 215 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 274 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 334 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 335 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 394 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg---- 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 395 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggtttgcaca 454 Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 455 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 514 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 515 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 574 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 575 attggctctcgctctca 591
>dbj|AK109376.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D06, full insert sequence Length = 1080 Score = 658 bits (332), Expect = 0.0 Identities = 456/497 (91%), Gaps = 4/497 (0%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 78 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 137 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 138 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 197 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 198 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 257 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 317 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 318 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 377 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg---- 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 378 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggtttgcaca 437 Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 438 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 497 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 498 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 557 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 558 attggctctcgctctca 574
>dbj|AK103646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135B19, full insert sequence Length = 1079 Score = 658 bits (332), Expect = 0.0 Identities = 456/497 (91%), Gaps = 4/497 (0%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 95 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 154 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 155 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 214 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 215 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 274 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 334 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 335 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 394 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg---- 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 395 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggtttgcaca 454 Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 455 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 514 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 515 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 574 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 575 attggctctcgctctca 591
>dbj|D37886.1|RICPC2SA Rice mRNA for proteasome C2 subunit, complete cds Length = 1045 Score = 658 bits (332), Expect = 0.0 Identities = 456/497 (91%), Gaps = 4/497 (0%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 80 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 139 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 140 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 199 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 200 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 259 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 260 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 319 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 320 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 379 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg---- 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 380 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggtttgcaca 439 Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 440 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 499 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 500 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 559 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 560 attggctctcgctctca 576
>gb|BT017945.1| Zea mays clone EL01N0521D09.c mRNA sequence Length = 1171 Score = 559 bits (282), Expect = e-156 Identities = 433/483 (89%), Gaps = 4/483 (0%) Strand = Plus / Plus Query: 50 gatgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgtt 109 ||||||||| ||||||||||||||||| || || || |||||||| |||||||||||||| Sbjct: 113 gatgttccggaaccagtacgacaccgacgtgacgacatggagcccccaggggcggctgtt 172 Query: 110 ccaggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctc 169 |||||||||||| ||||||||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 173 ccaggtggagtacgccatggaggccgtcaagcagggctcagcctgcgtcgggctccggtc 232 Query: 170 cgccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccacca 229 | ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||| |||| Sbjct: 233 cagcacccacgccgtcctcgccgccgtcaacaagcccgcctccgagctctcctcctacca 292 Query: 230 gcgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccga 289 ||| ||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 293 gcggaaggtgttccgcgtcgctgaccacgccggggtcgcgctcgtttgcctcaccgccga 352 Query: 290 cggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacga 349 ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 353 cggccgcgttctctcgcgcttcctccgcaacgagtgcatcaaccactccttcgtctacga 412 Query: 350 cgcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg--- 406 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 413 ggcgccgctccccgtctccaggctcgcgctcaagctcgccgacaaggcgcaggtttgcac 472 Query: 407 -cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtc 465 ||||| |||||||||||||||||||| || |||||||| |||||||| || || ||||| Sbjct: 473 acagcggtcatggaagaggccctatggtgttggcctcctagttgctggactggacgagtc 532 Query: 466 tggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 525 || || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 533 aggggctcatctgtactacaactgccccagcgggaactactttgagtaccaggcattcgc 592 Query: 526 cat 528 ||| Sbjct: 593 cat 595
>gb|AY104937.1| Zea mays PCO082324 mRNA sequence Length = 1160 Score = 543 bits (274), Expect = e-151 Identities = 431/483 (89%), Gaps = 4/483 (0%) Strand = Plus / Plus Query: 50 gatgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgtt 109 ||||||||| ||||||||||||||||| || || || |||||||| |||||||||||||| Sbjct: 143 gatgttccggaaccagtacgacaccgacgtgacgacatggagcccccaggggcggctgtt 202 Query: 110 ccaggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctc 169 |||||||||||| ||||||||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 203 ccaggtggagtacgccatggaggccgtcaagcagggctccgcctgcgtcgggctccggtc 262 Query: 170 cgccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccacca 229 ||||||||||||||| ||||||| ||||||| ||||| ||||||| ||||| |||| Sbjct: 263 gagcacccacgccgtcctagccgccgtcaacaagcccgcctccgagctctcctcctacca 322 Query: 230 gcgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccga 289 ||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 323 gcggaaggtgttccgcgtcgctgaccacgccggggtcgctctcgccggcctcaccgccga 382 Query: 290 cggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacga 349 ||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 383 cggccgcgttctctcgcgtttcctccgcaacgagtgcatcaaccactccttcgtctacga 442 Query: 350 cgcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggtttg--- 406 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 443 ggcgccgctccccgtctccaggctcgcgctcaagctcgccgacaaggcgcaggtttgcac 502 Query: 407 -cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtc 465 ||||| |||||||||||||||||||| || |||||||| |||||||| || || ||||| Sbjct: 503 acagcggtcatggaagaggccctatggtgttggcctcctagttgctggactggacgagtc 562 Query: 466 tggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgc 525 || || ||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 563 aggggctcatctgtactacaactgccccagcgggaactactttgagtaccaggcatttgc 622 Query: 526 cat 528 ||| Sbjct: 623 cat 625
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 517 bits (261), Expect = e-143 Identities = 330/353 (93%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 1784706 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 1784765 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1784766 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 1784825 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 1784826 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 1784885 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1784886 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 1784945 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1784946 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 1785005 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggt 403 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1785006 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggt 1785058 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 1787404 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 1787463 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 1787464 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 1787523 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 1787524 attggctctcgctctca 1787540 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 27308553 cgccgtcctcgccgccgccaa 27308533 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 cgcgtcctctcccgcttcctccgc 317 ||||||||||||||| |||||||| Sbjct: 34691491 cgcgtcctctcccgcgtcctccgc 34691514 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 27937654 ccacgccgtcctcgccgccg 27937635
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 517 bits (261), Expect = e-143 Identities = 330/353 (93%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 102718 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 102777 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 102778 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 102837 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 102838 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 102897 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 102898 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 102957 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102958 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 103017 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggt 403 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103018 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggt 103070 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 105416 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 105475 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 105476 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 105535 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 105536 attggctctcgctctca 105552
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 517 bits (261), Expect = e-143 Identities = 330/353 (93%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||| ||||||||||||||||| || || || ||||||||| ||||||||||||| Sbjct: 21350 atgttccggaaccagtacgacaccgacgtgacgacgtggagcccggcggggcggctgttc 21409 Query: 111 caggtggagtatgccatggaggcggtgaagcagggctcggcctgcgtcggcctccgctcc 170 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 21410 caggtggagtacgccatggaggccgtgaagcagggctccgcctgcgtcggcctccgctcc 21469 Query: 171 gccacccacgccgtcctcgccgccgccaacaagtccgccaacgagctcccctcccaccag 230 |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||| Sbjct: 21470 cgcacccacgccgtcctcgccgccgcgaacaaggccgcctccgagctctcctcccaccag 21529 Query: 231 cgcaaggtcttccgcgtcgccgaccacgccggggtcgcgctcgccggcctcaccgccgac 290 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 21530 cggaaggtcttccgcgtcgcagaccacgccggggtcgcgctcgccggcctcaccgccgac 21589 Query: 291 ggccgcgtcctctcccgcttcctccgcaacgagtgcatcaaccacgccttcgtctacgac 350 ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 21590 ggccgcgtcctctcccgattcctccgctccgagtgcatcaaccacgccttcgtctacgac 21649 Query: 351 gcgcccctccccgtctccaggctcgcgctccgcctcgccgacaaggcgcaggt 403 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 21650 gcgcccctccccgtctccaggctcgcgctccgccttgccgacaaggcgcaggt 21702 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 407 cagcgttcatggaagaggccctatggggtcggcctccttgttgctggtctagatgagtct 466 ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 24048 cagcgatcatggaagaggccatatggtgttggcctccttgttgctggattagatgagtct 24107 Query: 467 ggagcccatctctactacaactgccccagtgggaactactttgagtaccaggcattcgcc 526 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct: 24108 ggagcccatctatactataactgccccagcggcaactattttgagtaccaggcatttgct 24167 Query: 527 attggctcccgctctca 543 |||||||| |||||||| Sbjct: 24168 attggctctcgctctca 24184
>gb|AY107790.1| Zea mays PCO082322 mRNA sequence Length = 677 Score = 412 bits (208), Expect = e-112 Identities = 313/348 (89%), Gaps = 4/348 (1%) Strand = Plus / Plus Query: 197 caacaagtccgccaacgagctcccctcccaccagcgcaaggtcttccgcgtcgccgacca 256 ||||||| ||||| ||||||| ||||| ||||||| ||||| ||||||||||||||||| Sbjct: 4 caacaagcccgcctccgagctctcctcctaccagcggaaggtgttccgcgtcgccgacca 63 Query: 257 cgccggggtcgcgctcgccggcctcaccgccgacggccgcgtcctctcccgcttcctccg 316 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 64 cgccggggtcgcgctcgccggcctcaccgccgacggccgcgtcctctcgcgcttcctccg 123 Query: 317 caacgagtgcatcaaccacgccttcgtctacgacgcgcccctccccgtctccaggctcgc 376 ||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| Sbjct: 124 caacgagtgcatcaaccactccttcgtctacgaggcgccgctccccgtctccaggctcgc 183 Query: 377 gctccgcctcgccgacaaggcgcaggttt----gcagcgttcatggaagaggccctatgg 432 |||| | |||||||||||||||||||| | ||| || ||||||||||||||||| || Sbjct: 184 gctcaggctcgccgacaaggcgcaggtctgcacgcancggtcatggaagaggccctacgg 243 Query: 433 ggtcggcctccttgttgctggtctagatgagtctggagcccatctctactacaactgccc 492 || |||||||| ||||| || || || ||||| |||||||| || |||||||||||||| Sbjct: 244 cgtgggcctcctcgttgccggactggacgagtcaggagcccacctgtactacaactgccc 303 Query: 493 cagtgggaactactttgagtaccaggcattcgccattggctcccgctc 540 ||| ||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 304 cagcgggaactacttcgagtaccaggcgttcgccatcggctcccgctc 351
>gb|AY085017.1| Arabidopsis thaliana clone 12455 mRNA, complete sequence Length = 1070 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 493 gatgagtctggagcccacctttactacaactgtcccagcggaaactactttgagtaccaa 552 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 553 gcttttgctattggatcccg 572
>gb|AF043526.1|AF043526 Arabidopsis thaliana 20S proteasome subunit PAF1 (PAF1) mRNA, complete cds Length = 1086 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 476 gatgagtctggagcccacctttactacaactgtcccagcggaaactactttgagtaccaa 535 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 536 gcttttgctattggatcccg 555
>ref|NM_123644.3| Arabidopsis thaliana PAF1; endopeptidase/ peptidase/ threonine endopeptidase AT5G42790 (PAF1) mRNA, complete cds Length = 1152 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 507 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 566 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 567 gcttttgctattggatcccg 586
>gb|AY113047.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds Length = 837 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 412 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 471 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 472 gcttttgctattggatcccg 491
>gb|AF375447.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds Length = 1036 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 507 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 566 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 567 gcttttgctattggatcccg 586
>gb|AY058128.1| Arabidopsis thaliana AT5g42790/MJB21_17 mRNA, complete cds Length = 965 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 424 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 483 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 484 gcttttgctattggatcccg 503
>emb|BX830176.1|CNS0A257 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB64ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 799 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 146 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 205 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 206 gcttttgctattggatcccg 225
>dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21 Length = 78369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 66986 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 66927 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 66926 gcttttgctattggatcccg 66907
>gb|M98495.1|ATHPSM30A Arabidopsis thaliana proteasome (PSM30) gene, complete cds Length = 3052 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 458 gatgagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccag 517 ||||||||||||||||| || ||||||||||| ||||| || |||||||| |||||||| Sbjct: 2334 gatgagtctggagcccacctttactacaactgtcccagcggaaactacttcgagtaccaa 2393 Query: 518 gcattcgccattggctcccg 537 || || || ||||| ||||| Sbjct: 2394 gcttttgctattggatcccg 2413
>ref|NM_135779.2| Drosophila melanogaster Pros6T CG5648-RA (Prosalpha6T), mRNA Length = 1021 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 100 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 159 Query: 141 caggg 145 ||||| Sbjct: 160 caggg 164
>gb|AC009340.4|AC009340 Drosophila melanogaster, chromosome 2L, region 34A-34E, BAC clone BACR04E19, complete sequence Length = 197159 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 21317 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 21376 Query: 141 caggg 145 ||||| Sbjct: 21377 caggg 21381
>gb|AC009200.6|AC009200 Drosophila melanogaster, chromosome 2L, region 34A-34E, BAC clone BACR32O12, complete sequence Length = 77914 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 989 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 930 Query: 141 caggg 145 ||||| Sbjct: 929 caggg 925
>gb|AY075285.1| Drosophila melanogaster AT30494 full insert cDNA Length = 1067 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 100 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 159 Query: 141 caggg 145 ||||| Sbjct: 160 caggg 164
>gb|AY147241.1| Drosophila melanogaster testis-specific 20S proteasome subunit alpha 6T (Prosalpha6T) gene, complete cds Length = 1101 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 135 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 194 Query: 141 caggg 145 ||||| Sbjct: 195 caggg 199
>gb|AE003639.3| Drosophila melanogaster chromosome 2L, section 48 of 83 of the complete sequence Length = 261775 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 81 accacctggagcccgcaggggcggctgttccaggtggagtatgccatggaggcggtgaag 140 ||||| ||||| |||||||| || || |||||||||||||| || |||||||||||||| Sbjct: 111417 accacttggagtccgcagggtcgtctcttccaggtggagtacgcaatggaggcggtgaaa 111476 Query: 141 caggg 145 ||||| Sbjct: 111477 caggg 111481
>emb|AJ291737.1|NTA291737 Nicotiana tabacum partial mRNA for putative alpha6 proteasome subunit (a6 gene) Length = 484 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 423 ggccctatggggtcggcctccttgttgctggtctagatgagtctggagcccatctctact 482 |||| ||||| || ||||| ||||||| ||| || ||||||||||| || || || |||| Sbjct: 371 ggccttatggtgttggcctgcttgttggtgggctggatgagtctggtgctcacctttact 430 Query: 483 acaactgccccagtgggaactactttgagta 513 |||| ||||| ||||| |||||||| ||||| Sbjct: 431 acaattgccctagtggtaactacttcgagta 461
>gb|AY737048.1| Oreochromis mossambicus clone Ov07G05 proteasome subunit alpha type 1 mRNA, complete cds Length = 763 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 50 gatgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcg 103 ||||||||||||||||||||||| |||||| ||| |||||||| |||||||| Sbjct: 28 gatgttccgcaaccagtacgacaacgatgtgaccgtatggagcccacaggggcg 81
>ref|NM_103619.3| Arabidopsis thaliana PAF2; endopeptidase/ peptidase/ threonine endopeptidase AT1G47250 (PAF2) mRNA, complete cds Length = 1637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 458 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 517 Query: 521 ttcgc 525 ||||| Sbjct: 518 ttcgc 522
>emb|Y13182.1|ATY13182 Arabidopsis thaliana mRNA for proteasome subunit prc2b Length = 954 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 387 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 446 Query: 521 ttcgc 525 ||||| Sbjct: 447 ttcgc 451
>gb|AY135174.1| Nicotiana benthamiana 20S proteasome alpha 6 subunit (PAF1) mRNA, complete cds Length = 1097 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 423 ggccctatggggtcggcctccttgttgctggtctagatgagtctggagcccatctctact 482 |||| ||||| || ||||| ||||||| ||| || ||||||||||| || || || || | Sbjct: 440 ggccttatggtgttggcctgcttgttggtgggctggatgagtctggtgctcacctttatt 499 Query: 483 acaactgccccagtgggaactactttgagtaccaggcattcgccattgg 531 |||| ||||| ||||| |||||||| ||||| || || || |||||||| Sbjct: 500 acaattgccctagtggtaactacttcgagtatcaagcttttgccattgg 548
>gb|AY141996.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, complete cds Length = 834 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 415 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 474 Query: 521 ttcgc 525 ||||| Sbjct: 475 ttcgc 479
>gb|AY057649.1| Arabidopsis thaliana At1g47250/F8G22_3 mRNA, complete cds Length = 1036 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 458 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 517 Query: 521 ttcgc 525 ||||| Sbjct: 518 ttcgc 522
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 9842 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 9783 Query: 521 ttcgc 525 ||||| Sbjct: 9782 ttcgc 9778
>gb|AF043527.1|AF043527 Arabidopsis thaliana 20S proteasome subunit PAF2 (PAF2) mRNA, complete cds Length = 880 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 461 gagtctggagcccatctctactacaactgccccagtgggaactactttgagtaccaggca 520 ||||| ||||| || ||||||||||||||||| || || ||||||||||| || || ||| Sbjct: 436 gagtcaggagctcacctctactacaactgccctagcggaaactactttgaatatcaagca 495 Query: 521 ttcgc 525 ||||| Sbjct: 496 ttcgc 500
>ref|XM_961880.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 1 (LOC655339), mRNA Length = 912 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 ||||| |||||||| ||||||| ||| || ||| ||||||||| ||||| || || | Sbjct: 79 atgtttcgcaaccaatacgacagcgacgtgaccgtctggagcccccagggccgcctccac 138 Query: 111 caggtggagtatgccatggaggc 133 ||||||||||| ||||||||||| Sbjct: 139 caggtggagtacgccatggaggc 161
>ref|NM_001031407.1| Gallus gallus proteasome (prosome, macropain) subunit, alpha type, 5 (PSMA5), mRNA Length = 1047 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||| |||||||||| |||||||||||||| ||||| Sbjct: 157 aggggaggctgttccaagtggagtatgccatcgaggc 193
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||||||||||||||||| ||||| ||||| ||||| Sbjct: 249 aggggcggctgttccaggtcgagtacgccatcgaggc 285
>emb|AJ720305.1| Gallus gallus mRNA for hypothetical protein, clone 14i9 Length = 1047 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||| |||||||||| |||||||||||||| ||||| Sbjct: 157 aggggaggctgttccaagtggagtatgccatcgaggc 193
>ref|NM_204613.1| Gallus gallus proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA Length = 955 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 108 ttccaggtggagtatgccatggaggcggtgaagcagggctc 148 |||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 69 ttccaggtggagtacgcccaggaggcggtgaagaagggctc 109
>gb|U09226.1|GGU09226 Gallus gallus proteasome 28 kDa subunit homolog mRNA, complete cds Length = 955 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 108 ttccaggtggagtatgccatggaggcggtgaagcagggctc 148 |||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 69 ttccaggtggagtacgcccaggaggcggtgaagaagggctc 109
>emb|CR387264.1| Gallus gallus finished cDNA, clone ChEST12o18 Length = 723 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 108 ttccaggtggagtatgccatggaggcggtgaagcagggctc 148 |||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 54 ttccaggtggagtacgcccaggaggcggtgaagaagggctc 94
>emb|CR386956.1| Gallus gallus finished cDNA, clone ChEST102f7 Length = 769 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||| |||||||||| |||||||||||||| ||||| Sbjct: 168 aggggaggctgttccaagtggagtatgccatcgaggc 204
>emb|BX932149.1| Gallus gallus finished cDNA, clone ChEST471b14 Length = 692 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 108 ttccaggtggagtatgccatggaggcggtgaagcagggctc 148 |||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 72 ttccaggtggagtacgcccaggaggcggtgaagaagggctc 112
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||||||||||||||||| ||||| ||||| ||||| Sbjct: 352 aggggcggctgttccaggtcgagtacgccatcgaggc 388
>gb|BC084394.1| Xenopus laevis cDNA clone MGC:86195 IMAGE:6956856, complete cds Length = 1067 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 |||||||| |||||||| |||||||||||||| Sbjct: 114 gagtatgcaatggaggccgtgaagcagggctc 145
>ref|XM_784671.1| PREDICTED: Strongylocentrotus purpuratus similar to Proteasome subunit alpha type 1 (Proteasome component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain) (LOC584825), partial mRNA Length = 608 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||||||||||||||| || ||||||||||| Sbjct: 131 gagtatgccatggaggccgtcaagcagggctc 162
>dbj|AB164679.1| Xenopus laevis mRNA for 20S proteasome alpha6 subunit, partial cds Length = 783 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 |||||||| |||||||| |||||||||||||| Sbjct: 67 gagtatgcaatggaggccgtgaagcagggctc 98
>gb|BC092105.1| Xenopus laevis cDNA clone MGC:115143 IMAGE:6950778, complete cds Length = 1063 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 |||||||| |||||||| |||||||||||||| Sbjct: 109 gagtatgcaatggaggccgtgaagcagggctc 140
>dbj|AB225007.1| Aspergillus oryzae cDNA, contig sequence: AoEST1858 Length = 1020 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 108 ttccaggtggagtatgccatgga 130 ||||||||||||||||||||||| Sbjct: 186 ttccaggtggagtatgccatgga 208
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 108 ttccaggtggagtatgccatgga 130 ||||||||||||||||||||||| Sbjct: 756907 ttccaggtggagtatgccatgga 756885
>ref|NM_185696.1| Oryza sativa (japonica cultivar-group), Ozsa8047 predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 44 aggggcggctctaccaggtggagtacgcgatggaggcg 81
>ref|NM_185686.1| Oryza sativa (japonica cultivar-group), Ozsa8037 predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 44 aggggcggctctaccaggtggagtacgcgatggaggcg 81
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 99 gggcggctgttccaggtggagtatgccatggagg 132 ||||| ||||||||||| ||||||||||| |||| Sbjct: 94357 gggcgtctgttccaggtcgagtatgccattgagg 94390
>ref|XM_804684.1| Trypanosoma cruzi strain CL Brener proteasome alpha 1 subunit (Tc00.1047053506167.40) partial mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 cggctgttccaggtggagtatgccatggaggcggtgaa 139 |||||||||||||| ||||| |||| ||||||||||| Sbjct: 52 cggctgttccaggtagagtacgccaatgaggcggtgaa 89
>ref|XM_797774.1| Trypanosoma cruzi strain CL Brener proteasome alpha 7 subunit (Tc00.1047053507785.20) partial mRNA Length = 148 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 cggctgttccaggtggagtatgccatggaggcggtgaa 139 |||||||||||||| ||||| |||| ||||||||||| Sbjct: 52 cggctgttccaggtagagtacgccaatgaggcggtgaa 89
>ref|XM_791154.1| PREDICTED: Strongylocentrotus purpuratus similar to Proteasome subunit alpha type 3 (Proteasome component C8) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8) (LOC591599), mRNA Length = 762 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tgttccaggtggagtatgccat 127 |||||||||||||||||||||| Sbjct: 62 tgttccaggtggagtatgccat 83
>emb|BX066418.1|CNS09NEU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5CH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 768 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 61 ctgttccaggttgagtatgccatcgaggcg 90
>emb|BX063332.1|CNS09L14 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45AD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1010 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 154 ctgttccaggttgagtatgccatcgaggcg 183
>emb|BX062751.1|CNS09KKZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44AG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1022 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 58 ctgttccaggttgagtatgccatcgaggcg 87
>emb|BX056699.1|CNS09FWV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC36AG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 142 ctgttccaggttgagtatgccatcgaggcg 171
>emb|BX031436.1|CNS08WF4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46DE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 844 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 132 ctgttccaggttgagtatgccatcgaggcg 161
>emb|BX019821.1|CNS08NGH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 175 ctgttccaggttgagtatgccatcgaggcg 204
>emb|BX017936.1|CNS08M04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1005 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 149 ctgttccaggttgagtatgccatcgaggcg 178
>emb|BX018241.1|CNS08M8L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27CF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 152 ctgttccaggttgagtatgccatcgaggcg 181
>emb|BX015753.1|CNS08KBH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23CF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 319 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 136 ctgttccaggttgagtatgccatcgaggcg 165
>emb|BX011882.1|CNS08HBY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1025 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 983 ctgttccaggttgagtatgccatcgaggcg 954
>emb|BX011881.1|CNS08HBX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA18DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 902 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 119 ctgttccaggttgagtatgccatcgaggcg 148
>emb|BX011202.1|CNS08GT2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17DF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 941 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 165 ctgttccaggttgagtatgccatcgaggcg 194
>emb|BX010636.1|CNS08GDC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 971 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 171 ctgttccaggttgagtatgccatcgaggcg 200
>emb|BX009604.1|CNS08FKO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 125 ctgttccaggttgagtatgccatcgaggcg 154
>ref|XM_784278.1| PREDICTED: Strongylocentrotus purpuratus similar to proteasome alpha 3 subunit isoform 2 (LOC584419), partial mRNA Length = 593 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tgttccaggtggagtatgccat 127 |||||||||||||||||||||| Sbjct: 68 tgttccaggtggagtatgccat 89
>gb|DQ122828.1| Medicago sativa clone ME1 proteasome subunit mRNA, complete cds Length = 626 Score = 44.1 bits (22), Expect = 0.47 Identities = 113/143 (79%), Gaps = 4/143 (2%) Strand = Plus / Plus Query: 384 ctcgccgacaaggcgcaggtttgca----gcgttcatggaagaggccctatggggtcggc 439 |||||||| ||||| |||||||||| ||| ||||||||| | || ||||| || || Sbjct: 96 ctcgccgataaggctcaggtttgcactcagcgatcatggaagcgtccttatggcgttgga 155 Query: 440 ctccttgttgctggtctagatgagtctggagcccatctctactacaactgccccagtggg 499 || || || ||||| ||||||| || || || || ||||| ||||||||||| || || Sbjct: 156 cttctagtagctggattagatgaatcaggggctcacctctattacaactgcccaagcgga 215 Query: 500 aactactttgagtaccaggcatt 522 ||||| ||||| || |||||||| Sbjct: 216 aactattttgaatatcaggcatt 238
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 99 gggcggctgttccaggtggagtatgccatggagg 132 ||||| ||||||||||| ||||||||||| |||| Sbjct: 11307999 gggcgtctgttccaggtcgagtatgccattgagg 11308032 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 26875475 cgccgtcctcgccgccgccaa 26875455 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 15311783 cgccgtcctcgccgccgccaa 15311803
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 3869199 aggggcggctctaccaggtggagtacgcgatggaggcg 3869236 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 3831143 aggggcggctctaccaggtggagtacgcgatggaggcg 3831180 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 29502577 cgccgtcctcgccgccgccaa 29502557 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 9626844 cgccgtcctcgccgccgccaa 9626864 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 18053500 ccacgccgtcctcgccgccg 18053519
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 ccgccacccacgccgtcctcgccgcc 194 ||||||||||||||| |||||||||| Sbjct: 107663 ccgccacccacgccgacctcgccgcc 107688
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 127153 aggggcggctctaccaggtggagtacgcgatggaggcg 127190 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 89097 aggggcggctctaccaggtggagtacgcgatggaggcg 89134
>ref|XM_314945.2| Anopheles gambiae str. PEST ENSANGP00000019329 (ENSANGG00000016840), mRNA Length = 1160 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggcg 134 ||||||||||| ||||||||||| |||||| Sbjct: 174 ctgttccaggttgagtatgccatcgaggcg 203
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 99 gggcggctgttccaggtggagtatgccatggagg 132 ||||| ||||||||||| ||||||||||| |||| Sbjct: 769 gggcgtctgttccaggtcgagtatgccattgagg 802
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 acgccttcgtctacgacgcgcc 355 |||||||||||||||||||||| Sbjct: 5399065 acgccttcgtctacgacgcgcc 5399044 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 4615914 cgccgtcctcgccgccgcca 4615933
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 134 aggggcggctctaccaggtggagtacgcgatggaggcg 171
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 99 gggcggctgttccaggtggagtatgccatggagg 132 ||||| ||||||||||| ||||||||||| |||| Sbjct: 11387188 gggcgtctgttccaggtcgagtatgccattgagg 11387221 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 27202528 cgccgtcctcgccgccgccaa 27202508 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 17207714 cgccgtcctcgccgccgccaa 17207694 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 15394720 cgccgtcctcgccgccgccaa 15394740
>gb|U75302.1|TCU75302 Trypanosoma cruzi 29 kDa proteasome subunit class II (tcpr29B) mRNA, complete cds Length = 1155 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 cggctgttccaggtggagtatgccatggaggcggtgaa 139 |||||||||||||| ||||| |||| ||||||||||| Sbjct: 70 cggctgttccaggtagagtacgccaatgaggcggtgaa 107
>gb|U73851.1|TCU73851 Trypanosoma cruzi 29 kDa proteasome subunit TCPR29 (tcpr29) mRNA, complete cds Length = 1199 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 cggctgttccaggtggagtatgccatggaggcggtgaa 139 |||||||||||||| ||||| |||| ||||||||||| Sbjct: 98 cggctgttccaggtagagtacgccaatgaggcggtgaa 135
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggcg 134 |||||||||| | |||||||||||| || ||||||||| Sbjct: 137 aggggcggctctaccaggtggagtacgcgatggaggcg 174
>gb|AF173280.1| Cormocephalus monteithi 28S ribosomal RNA gene, partial sequence Length = 359 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 gctcgcgctccgcctcgccgacaag 395 ||||| ||||||||||||||||||| Sbjct: 214 gctcgtgctccgcctcgccgacaag 190
>gb|BC081373.1| Xenopus tropicalis MGC90008 protein, mRNA (cDNA clone MGC:90008 IMAGE:7026550), complete cds Length = 1121 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 gccggcctcaccgccgacggccgcgtcct 301 ||||||||||||||||||| |||| |||| Sbjct: 263 gccggcctcaccgccgacgcccgcctcct 291
>ref|XM_483815.1| Oryza sativa (japonica cultivar-group), mRNA Length = 273 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 235 cgccgtcctcgccgccgccaa 215
>ref|XM_482836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 273 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 235 cgccgtcctcgccgccgccaa 215
>gb|DQ214008.1| Taeniopygia guttata clone 0064P0007F03 proteasome alpha 5 subunit variant 1-like mRNA, complete sequence Length = 1055 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgccatggaggc 133 ||||| |||| ||||||||||| |||||||| ||||| Sbjct: 170 aggggaggctcttccaggtggaatatgccatcgaggc 206
>gb|AY190683.1| Pagrus major proteasome subunit alpha type 1 mRNA, partial cds Length = 593 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcaggg 145 ||||||||||||||||| ||||| ||||| Sbjct: 100 gagtatgccatggaggcagtgaaacaggg 128
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 86989 cgccgtcctcgccgccgccaa 86969
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 64015 cgccgtcctcgccgccgccaa 63995
>ref|XM_413742.1| PREDICTED: Gallus gallus similar to Proteasome subunit alpha type 4 (Proteasome component C9) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome subunit L) (LOC415357), mRNA Length = 1154 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 168 ctgtaccaggttgagtatgccatggaggc 196
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 104024 cgccgtcctcgccgccgccaa 104044
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 55413 cgccgtcctcgccgccgccaa 55433
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 acaccgatgtcaccacctgga 90 ||||||||||||||||||||| Sbjct: 29278 acaccgatgtcaccacctgga 29258
>gb|AY728266.1| Trypanosoma cruzi voucher Dm28c zinc finger protein 7 (zinc7) gene, partial cds; and zinc finger protein 8 (zinc8), heavy chain clathrin (claH), and alpha6 proteasome subunit (pr29A) genes, complete cds Length = 14737 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 103 ggctgttccaggtggagtatgccatggaggcggtgaa 139 ||||||||||||| ||||| |||| ||||||||||| Sbjct: 13636 ggctgttccaggtagagtacgccaatgaggcggtgaa 13672
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gcctcaccgccgacggccgcg 297 ||||||||||||||||||||| Sbjct: 1683733 gcctcaccgccgacggccgcg 1683713
>ref|XM_548696.2| PREDICTED: Canis familiaris similar to polycystin-1L1 (LOC491575), mRNA Length = 8244 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 ggaggcggtgaagcagggctc 148 ||||||||||||||||||||| Sbjct: 2037 ggaggcggtgaagcagggctc 2017
>gb|AY231830.1| Drosophila yakuba clone yak-em_Pros35 mRNA sequence Length = 576 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 ||||| |||||||||||||| | |||||| || ||||| |||||||| || || | Sbjct: 1 atgtttcgcaaccagtacgatagcgatgttacggtgtggagtccgcagggacgtctccac 60 Query: 111 caggtggagtatgccatggaggcggtgaa 139 ||||||||||| || |||||||| ||||| Sbjct: 61 caggtggagtacgcaatggaggccgtgaa 89
>gb|AY278948.1| Branchiostoma belcheri tsingtaunese proteasome alpha 4 subunit mRNA, complete cds Length = 1185 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| ||||||||| |||||||||||||| Sbjct: 76 ctgtaccaggtggaatatgccatggaggc 104
>emb|X96974.1|SOPROTE37 S.oleracea mRNA for proteasome 37kD subunit Length = 1046 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatggaggcg 134 ||||||||||||||| ||||||||| Sbjct: 132 ccaggtggagtatgcaatggaggcg 156
>ref|XM_775196.1| PREDICTED: Strongylocentrotus purpuratus similar to proteasome (prosome, macropain) subunit, alpha type, 4 (LOC574798), mRNA Length = 864 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatgga 130 ||||||||||||||||||||| Sbjct: 21 ccaggtggagtatgccatgga 41
>emb|X15497.1|DMPROS35 Drosophila melanogaster mRNA for 35 kd subunit of proteasome Length = 999 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 ||||| |||||||||||||| | |||||| || ||||| |||||||| || || | Sbjct: 71 atgtttcgcaaccagtacgatagcgatgttactgtgtggagtccgcagggacgtctccac 130 Query: 111 caggtggagtatgccatggaggcggtgaa 139 ||||||||||| || |||||||| ||||| Sbjct: 131 caggtggagtacgcaatggaggccgtgaa 159
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 accgccgacggccgcgtcctc 302 ||||||||||||||||||||| Sbjct: 26617 accgccgacggccgcgtcctc 26597
>emb|AL606609.2|OSJN00064 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K24, complete sequence Length = 121799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 9086 cgccgtcctcgccgccgccaa 9066
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 70268 cgccgtcctcgccgccgccaa 70288
>gb|AE011775.1| Xanthomonas axonopodis pv. citri str. 306, section 153 of 469 of the complete genome Length = 11621 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gcctcaccgccgacggccgcg 297 ||||||||||||||||||||| Sbjct: 10734 gcctcaccgccgacggccgcg 10714
>gb|AC104070.3| Homo sapiens BAC clone RP11-279K24 from 4, complete sequence Length = 123291 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cacgccgtcctcgccgccgcc 197 ||||||||||||||||||||| Sbjct: 93185 cacgccgtcctcgccgccgcc 93165
>gb|DQ402100.1| Opisthorchis viverrini proteasome subunit alpha type 5 mRNA, complete cds Length = 811 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 ggctgttccaggtggagtatgccat 127 |||||||||||||||| |||||||| Sbjct: 79 ggctgttccaggtggaatatgccat 103
>ref|NM_078808.2| Drosophila melanogaster Proteasome 35kD subunit CG4904-RA (Pros35), mRNA Length = 1037 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 ||||| |||||||||||||| | |||||| || ||||| |||||||| || || | Sbjct: 91 atgtttcgcaaccagtacgatagcgatgttactgtgtggagtccgcagggacgtctccac 150 Query: 111 caggtggagtatgccatggaggcggtgaa 139 ||||||||||| || |||||||| ||||| Sbjct: 151 caggtggagtacgcaatggaggccgtgaa 179
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 70431 cgccgtcctcgccgccgccaa 70451
>gb|AY071178.1| Drosophila melanogaster RE23081 full length cDNA Length = 1041 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 ||||| |||||||||||||| | |||||| || ||||| |||||||| || || | Sbjct: 91 atgtttcgcaaccagtacgatagcgatgttactgtgtggagtccgcagggacgtctccac 150 Query: 111 caggtggagtatgccatggaggcggtgaa 139 ||||||||||| || |||||||| ||||| Sbjct: 151 caggtggagtacgcaatggaggccgtgaa 179
>emb|BX936267.2| Gallus gallus finished cDNA, clone ChEST953e15 Length = 886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 189 ctgtaccaggttgagtatgccatggaggc 217
>emb|BX936227.2| Gallus gallus finished cDNA, clone ChEST953k14 Length = 886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 189 ctgtaccaggttgagtatgccatggaggc 217
>emb|BX933650.2| Gallus gallus finished cDNA, clone ChEST948a22 Length = 886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 189 ctgtaccaggttgagtatgccatggaggc 217
>emb|CR353143.1| Gallus gallus finished cDNA, clone ChEST214g12 Length = 891 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 177 ctgtaccaggttgagtatgccatggaggc 205
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 6516020 cgccgtcctcgccgccgccaa 6516040 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 1229120 cgccgtcctcgccgccgccaa 1229100 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ctcaccgccgacggccgcgtcctc 302 |||| ||||||||||||||||||| Sbjct: 20636898 ctcatcgccgacggccgcgtcctc 20636875
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 24581590 cgccgtcctcgccgccgccaa 24581570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgcgctcgccggcctcaccg 285 ||||||||||||||||||||| Sbjct: 23433310 tcgcgctcgccggcctcaccg 23433330 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ctcggcctgcgtcggcctccgctcc 170 |||||||||||||| |||||||||| Sbjct: 364313 ctcggcctgcgtcgccctccgctcc 364337
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 28224277 cgccgtcctcgccgccgccaa 28224297 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 22850173 cgccgtcctcgccgccgccaa 22850153 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 20484124 cgccgacggccgcgtcctcccccg 20484101
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 27336457 cgccgtcctcgccgccgccaa 27336437
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 28469100 cgccgtcctcgccgccgccaa 28469120 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 27596739 cgccgtcctcgccgccgccaa 27596719
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 11442138 cgccgtcctcgccgccgccaa 11442158 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 21468743 ccacgccgtcctcgccgccg 21468762
>ref|NM_001008158.1| Xenopus tropicalis MGC90008 protein (MGC90008), mRNA Length = 1121 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 gccggcctcaccgccgacggccgcgtcct 301 ||||||||||||||||||| |||| |||| Sbjct: 263 gccggcctcaccgccgacgcccgcctcct 291
>emb|BX933652.1| Gallus gallus finished cDNA, clone ChEST943f10 Length = 886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 189 ctgtaccaggttgagtatgccatggaggc 217
>emb|BX933615.1| Gallus gallus finished cDNA, clone ChEST944l11 Length = 886 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgttccaggtggagtatgccatggaggc 133 |||| |||||| ||||||||||||||||| Sbjct: 189 ctgtaccaggttgagtatgccatggaggc 217
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 cgccgaccacgccggggtcgcgctc 272 ||||||||||||||||||| ||||| Sbjct: 1209662 cgccgaccacgccggggtctcgctc 1209686
>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003M19 Length = 171790 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 42118 cgccgtcctcgccgccgccaa 42098
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 cgcgctccgcctcgccgacaa 394 ||||||||||||||||||||| Sbjct: 1081631 cgcgctccgcctcgccgacaa 1081651
>dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0450D12 Length = 176431 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 85461 cgccgtcctcgccgccgccaa 85481
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 67083 cgccgtcctcgccgccgccaa 67063
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 79336 cgccgtcctcgccgccgccaa 79356
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 23486 cgccgtcctcgccgccgccaa 23466
>dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0030A22 Length = 141096 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 128325 cgccgtcctcgccgccgccaa 128305
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 24011 cgccgtcctcgccgccgccaa 23991
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 16092 cgccgtcctcgccgccgccaa 16112
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 107750 cgccgtcctcgccgccgccaa 107770
>emb|AJ335651.1|HSA335651 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IN20C Length = 656 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cacgccgtcctcgccgccgcc 197 ||||||||||||||||||||| Sbjct: 280 cacgccgtcctcgccgccgcc 260
>gb|AF170561.1|AF170561 Streptomyces coelicolor SdrD (sdrD) gene, complete cds Length = 2568 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 accgccgacggccgcgtcctc 302 ||||||||||||||||||||| Sbjct: 2510 accgccgacggccgcgtcctc 2530
>emb|CR761791.2| Xenopus tropicalis finished cDNA, clone TGas125b12 Length = 1022 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 gccggcctcaccgccgacggccgcgtcct 301 ||||||||||||||||||| |||| |||| Sbjct: 237 gccggcctcaccgccgacgcccgcctcct 265
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 24509796 cgccgtcctcgccgccgccaa 24509776 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 tcgcgctcgccggcctcaccg 285 ||||||||||||||||||||| Sbjct: 23361501 tcgcgctcgccggcctcaccg 23361521 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ctcggcctgcgtcggcctccgctcc 170 |||||||||||||| |||||||||| Sbjct: 364313 ctcggcctgcgtcgccctccgctcc 364337
>emb|AL954852.5|CNS08CD6 Oryza sativa chromosome 12, . BAC OJ1573_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143895 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgccaa 199 ||||||||||||||||||||| Sbjct: 26456 cgccgtcctcgccgccgccaa 26436
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 tcgcgctcgccggcctcaccg 285 ||||||||||||||||||||| Sbjct: 68849 tcgcgctcgccggcctcaccg 68829
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ctcggcctgcgtcggcctccgctcc 170 |||||||||||||| |||||||||| Sbjct: 97364 ctcggcctgcgtcgccctccgctcc 97388
>gb|U73850.1|TCU73850 Trypanosoma cruzi 29 kDa proteasome subunit TCPR29A (tcpr29A) gene, complete cds Length = 1838 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 103 ggctgttccaggtggagtatgccatggaggcggtgaa 139 ||||||||||||| ||||| |||| ||||||||||| Sbjct: 542 ggctgttccaggtagagtacgccaatgaggcggtgaa 578
>emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete sequence Length = 207814 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ggtggagtatgccatggaggc 133 ||||||||||||||||||||| Sbjct: 86722 ggtggagtatgccatggaggc 86742
>ref|XM_512509.1| PREDICTED: Pan troglodytes phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta) (LOC455855), mRNA Length = 2753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1291 cgccgtcctcgccgccgcca 1310
>ref|NM_188970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 663 cgccgacggccgcgtcctcccccg 686
>ref|XM_472437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 507 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ctcaccgccgacggccgcgtcctc 302 |||| ||||||||||||||||||| Sbjct: 82 ctcatcgccgacggccgcgtcctc 105
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctggagcccgcaggggcggc 105 |||||||||||||||||||| Sbjct: 2298467 ctggagcccgcaggggcggc 2298448
>ref|XM_470292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 849 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 411 cgccgacggccgcgtcctcccccg 434
>ref|NM_184603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 45 cgccgtcctcgccgccgcca 64
>ref|NM_005027.2| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta) (PIK3R2), mRNA Length = 3953 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1291 cgccgtcctcgccgccgcca 1310
>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete cds, alternatively spliced; and 5S ribosomal RNA gene, complete sequence Length = 197496 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgccccagtgggaactactt 507 |||||||||||||||||||| Sbjct: 51224 tgccccagtgggaactactt 51243
>gb|BT018713.1| Zea mays clone EL01N0516G04.d mRNA sequence Length = 1620 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cacccacgccgtcctcgccgccgc 196 ||||| |||||||||||||||||| Sbjct: 87 caccctcgccgtcctcgccgccgc 110
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gctcgcgctccgcctcgccg 390 |||||||||||||||||||| Sbjct: 71349 gctcgcgctccgcctcgccg 71330
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 gctcgcgctccgcctcgccgacaaggcg 398 ||||||||| ||||||||||| |||||| Sbjct: 1584306 gctcgcgctgcgcctcgccgagaaggcg 1584333
>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015K03, complete sequence Length = 89172 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 60553 cgccgtcctcgccgccgcca 60534
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 caccgccgacggccgcgtcc 300 |||||||||||||||||||| Sbjct: 2152701 caccgccgacggccgcgtcc 2152720
>ref|XM_362409.1| Magnaporthe grisea 70-15 hypothetical protein (MG07992.4) partial mRNA Length = 1317 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 aactactttgagtaccaggc 519 |||||||||||||||||||| Sbjct: 667 aactactttgagtaccaggc 686
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 gttccaggtggagtatgcca 126 |||||||||||||||||||| Sbjct: 2059218 gttccaggtggagtatgcca 2059199
>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR) gene, complete cds Length = 192168 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgccccagtgggaactactt 507 |||||||||||||||||||| Sbjct: 43941 tgccccagtgggaactactt 43960
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gctcgcgctccgcctcgccg 390 |||||||||||||||||||| Sbjct: 21566455 gctcgcgctccgcctcgccg 21566436 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 16066335 cgccgtcctcgccgccgcca 16066316 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 3691087 cgccgacggccgcgtcctcccccg 3691064
>gb|AC005102.1| Homo sapiens BAC clone CTA-356E1 from 7, complete sequence Length = 106508 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ggagcccatctctactacaa 486 |||||||||||||||||||| Sbjct: 48940 ggagcccatctctactacaa 48921
>emb|CR733149.2|CNS0GSKO Tetraodon nigroviridis full-length cDNA Length = 1013 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 101 gagtacgccatggaggcagtgaagcaaggctc 132
>emb|CR728678.2|CNS0GP70 Tetraodon nigroviridis full-length cDNA Length = 1067 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 125 gagtacgccatggaggcagtgaagcaaggctc 156
>emb|CR728657.2|CNS0GP6F Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 125 gagtacgccatggaggcagtgaagcaaggctc 156
>emb|CR727627.2|CNS0GODT Tetraodon nigroviridis full-length cDNA Length = 1065 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 124 gagtacgccatggaggcagtgaagcaaggctc 155
>emb|CR725199.2|CNS0GMID Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 123 gagtacgccatggaggcagtgaagcaaggctc 154
>emb|CR725530.2|CNS0GMRK Tetraodon nigroviridis full-length cDNA Length = 1035 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 106 gagtacgccatggaggcagtgaagcaaggctc 137
>emb|CR723015.2|CNS0GKTP Tetraodon nigroviridis full-length cDNA Length = 683 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 121 gagtacgccatggaggcagtgaagcaaggctc 152
>emb|CR680912.2|CNS0FOCC Tetraodon nigroviridis full-length cDNA Length = 1048 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 113 gagtacgccatggaggcagtgaagcaaggctc 144
>emb|CR680396.2|CNS0FNY0 Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 111 gagtacgccatggaggcagtgaagcaaggctc 142
>emb|CR678519.2|CNS0FMHV Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 117 gagtacgccatggaggcagtgaagcaaggctc 148
>emb|CR673592.2|CNS0FIPQ Tetraodon nigroviridis full-length cDNA Length = 1048 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 123 gagtacgccatggaggcagtgaagcaaggctc 154
>emb|CR670560.2|CNS0FGDI Tetraodon nigroviridis full-length cDNA Length = 1027 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 100 gagtacgccatggaggcagtgaagcaaggctc 131
>emb|CR670344.2|CNS0FG7I Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 112 gagtacgccatggaggcagtgaagcaaggctc 143
>emb|CR669383.2|CNS0FFGT Tetraodon nigroviridis full-length cDNA Length = 1052 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 124 gagtacgccatggaggcagtgaagcaaggctc 155
>emb|CR660839.2|CNS0F8VH Tetraodon nigroviridis full-length cDNA Length = 1069 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 123 gagtacgccatggaggcagtgaagcaaggctc 154
>emb|CR659748.2|CNS0F816 Tetraodon nigroviridis full-length cDNA Length = 1031 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 101 gagtacgccatggaggcagtgaagcaaggctc 132
>emb|CR645176.2|CNS0EWSE Tetraodon nigroviridis full-length cDNA Length = 1063 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 117 gagtatgccatggaggcggtgaagcagggctc 148 ||||| ||||||||||| |||||||| ||||| Sbjct: 124 gagtacgccatggaggcagtgaagcaaggctc 155
>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence Length = 191821 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tgccccagtgggaactactt 507 |||||||||||||||||||| Sbjct: 145204 tgccccagtgggaactactt 145185
>ref|NM_017278.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 1 (Psma1), mRNA Length = 1174 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcac 82 ||||| ||||||||||| |||| ||||||||| Sbjct: 89 atgtttcgcaaccagtatgacaacgatgtcac 120
>gb|BC063240.1| Homo sapiens cDNA clone IMAGE:4837855, **** WARNING: chimeric clone **** Length = 5160 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1341 cgccgtcctcgccgccgcca 1360
>emb|Z99716.4|HS250D10 Human DNA sequence from clone CTA-250D10 on chromosome 22 Contains the genes for SREBF2 (sterol regulatory element binding transcription factor 2), NAGA (alpha-N-acetylgalactosaminidase), a gene similar to neuronal-specific septin 3, a pseudogene similar to ANT2 (adenine nucleotide translocator 2), 2 mRNAs based on ESTs, a genomic marker D22S1178, a CA repeat polymorpism, ESTs and a CpG island, complete sequence Length = 220895 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacctggagcccgcaggggcggct 106 |||||||||||||| ||||||||| Sbjct: 119892 cacctggagcccgcgggggcggct 119915
>gb|BC032647.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta), mRNA (cDNA clone IMAGE:5518348), containing frame-shift errors Length = 3282 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1047 cgccgtcctcgccgccgcca 1066
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ctcgccggcctcaccgccgacggc 293 |||||| ||||||||||||||||| Sbjct: 663062 ctcgccagcctcaccgccgacggc 663085
>emb|BX063472.1|CNS09L50 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 42 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 101 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 102 caggtggagtatgcgatgga 121
>emb|BX058038.1|CNS09GY2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC38BA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 29 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 88 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 89 caggtggagtatgcgatgga 108
>emb|BX049748.1|CNS09AJS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25DD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 757 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 28 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 87 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 88 caggtggagtatgcgatgga 107
>emb|BX036806.1|CNS090KA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA8DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 86 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 145 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 146 caggtggagtatgcgatgga 165
>emb|BX031173.1|CNS08W7T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46CA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 982 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 11 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 70 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 71 caggtggagtatgcgatgga 90
>emb|BX025761.1|CNS08S1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39CC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 926 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 19 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 78 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 79 caggtggagtatgcgatgga 98
>emb|BX018589.1|CNS08MI9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28BA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 434 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 81 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 140 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 141 caggtggagtatgcgatgga 160
>emb|BX017360.1|CNS08LK4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA26AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 31 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 90 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 91 caggtggagtatgcgatgga 110
>emb|BX013800.1|CNS08IT8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20DA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1006 Score = 40.1 bits (20), Expect = 7.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcaccacctggagcccgcaggggcggctgttc 110 |||||||||||||| ||||| | |||||| || |||||| || ||||| || || | Sbjct: 36 atgttccgcaaccaatacgatagcgatgtgacggtctggagtccacagggccgtttgcac 95 Query: 111 caggtggagtatgccatgga 130 |||||||||||||| ||||| Sbjct: 96 caggtggagtatgcgatgga 115
>emb|X80907.1|HSPHOSINK H.sapiens mRNA for p85 beta subunit of phosphatidyl-inositol-3-kinase Length = 3201 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1020 cgccgtcctcgccgccgcca 1039
>emb|X52319.1|DMPROS29 Fruit fly mRNA for proteosome subunit Length = 928 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 134 ccaggtggagtacgccatggaggc 157
>gb|BC070082.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta), mRNA (cDNA clone MGC:87406 IMAGE:30343107), complete cds Length = 3953 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1291 cgccgtcctcgccgccgcca 1310
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ctcaccgccgacggccgcgtcctc 302 |||| ||||||||||||||||||| Sbjct: 71332 ctcatcgccgacggccgcgtcctc 71309
>gb|AE005990.1| Caulobacter crescentus CB15 section 316 of 359 of the complete genome Length = 10324 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gccggggtcgcgctcgccggcctc 281 |||||| ||||||||||||||||| Sbjct: 6719 gccgggctcgcgctcgccggcctc 6696
>gb|AE005732.1| Caulobacter crescentus CB15 section 58 of 359 of the complete genome Length = 14719 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 caccgccgacggccgcgtcc 300 |||||||||||||||||||| Sbjct: 12373 caccgccgacggccgcgtcc 12392
>gb|AE012526.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 434 of 460 of the complete genome Length = 10116 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgctcgccggcctcaccgc 286 |||||||||||||||||||| Sbjct: 6280 gcgctcgccggcctcaccgc 6261
>gb|AY095366.1| Squirrel monkey herpesvirus 1 UL28 gene, partial cds; glycoprotein B, UL26.5, and protease genes, complete cds; and capsid associated tegument protein gene, partial cds Length = 6751 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gctcgccggcctcaccgccg 288 |||||||||||||||||||| Sbjct: 2635 gctcgccggcctcaccgccg 2654
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 90290 cgccgacggccgcgtcctcccccg 90313
>ref|NM_057343.3| Drosophila melanogaster Proteasome 29kD subunit CG9327-RA (Pros29), mRNA Length = 971 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 146 ccaggtggagtacgccatggaggc 169
>gb|AY084140.1| Drosophila melanogaster RE23862 full insert cDNA Length = 988 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 147 ccaggtggagtacgccatggaggc 170
>gb|BC018187.1| Mus musculus zinc finger and BTB domain containing 7C, mRNA (cDNA clone MGC:25876 IMAGE:4208891), complete cds Length = 2163 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgaccacgccggggtcgcgc 270 |||||||||||||||||||| Sbjct: 1619 cgaccacgccggggtcgcgc 1600
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgc 124 |||||||||||| |||||| |||||||| Sbjct: 539445 aggggcggctgtaccaggtcgagtatgc 539472
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgctcgccggcctcaccgc 286 |||||||||||||||||||| Sbjct: 4874640 gcgctcgccggcctcaccgc 4874621
>emb|CR354189.1| Gallus gallus finished cDNA, clone ChEST69g22 Length = 1025 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacga 70 |||||||||||||||||||| Sbjct: 78 atgttccgcaaccagtacga 97
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 gctcgcgctccgcctcgccg 390 |||||||||||||||||||| Sbjct: 21559484 gctcgcgctccgcctcgccg 21559465 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 16060868 cgccgtcctcgccgccgcca 16060849 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 3691198 cgccgacggccgcgtcctcccccg 3691175
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cacgccgtcctcgccgccgc 196 |||||||||||||||||||| Sbjct: 2604308 cacgccgtcctcgccgccgc 2604327
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone BACR10P11, complete sequence Length = 164035 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 40985 ccaggtggagtacgccatggaggc 40962
>gb|AY737017.1| Oreochromis mossambicus clone Contig34 proteasome endopeptidase complex chain XC8 mRNA, partial cds Length = 464 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 tgttccaggtggagtatgccatggaggc 133 |||| |||||||||||||||||| |||| Sbjct: 72 tgtttcaggtggagtatgccatgaaggc 99
>emb|BX934055.1| Gallus gallus finished cDNA, clone ChEST59k8 Length = 1827 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacga 70 |||||||||||||||||||| Sbjct: 17 atgttccgcaaccagtacga 36
>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence Length = 177998 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgccccagtgggaactactt 507 |||||||||||||||||||| Sbjct: 51224 tgccccagtgggaactactt 51243
>gb|AC005844.8| Homo sapiens 12 BAC RP11-350L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145233 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 agcccatctctactacaact 488 |||||||||||||||||||| Sbjct: 119117 agcccatctctactacaact 119136
>gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complete sequence Length = 126039 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tgtcaccacctggagcccgcaggg 100 |||| ||||||||||||||||||| Sbjct: 50321 tgtccccacctggagcccgcaggg 50298
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 cgcgtcctctcccgcttcctccgc 317 ||||||||||||||| |||||||| Sbjct: 9339 cgcgtcctctcccgcgtcctccgc 9362
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 cgcgtcctctcccgcttcctccgc 317 ||||||||||||||| |||||||| Sbjct: 48442 cgcgtcctctcccgcgtcctccgc 48465
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cacgccgtcctcgccgccgc 196 |||||||||||||||||||| Sbjct: 4627815 cacgccgtcctcgccgccgc 4627796 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gccgtcctcgccgccgccaa 199 |||||||||||||||||||| Sbjct: 4397586 gccgtcctcgccgccgccaa 4397605
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cgccggcctcaccgccgacg 291 |||||||||||||||||||| Sbjct: 4410414 cgccggcctcaccgccgacg 4410395
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 49150 ccacgccgtcctcgccgccg 49169
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 119806 ccacgccgtcctcgccgccg 119825
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 110129 ccacgccgtcctcgccgccg 110148
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 65106 ccacgccgtcctcgccgccg 65087
>gb|AY184356.1| Gasterosteus aculeatus proteasome subunit alpha 3 mRNA, partial cds Length = 283 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 tgttccaggtggagtatgccatggaggc 133 |||||||||||||||| |||||| |||| Sbjct: 105 tgttccaggtggagtacgccatgaaggc 132
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 cgccgacggccgcgtcctctcccg 307 ||||||||||||||||||| |||| Sbjct: 114754 cgccgacggccgcgtcctcccccg 114731
>ref|NM_211639.1| Eremothecium gossypii AGL089Wp (AGL089W), mRNA Length = 741 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 97 aggggcggctgttccaggtggagtatgc 124 |||||||||||| |||||| |||||||| Sbjct: 47 aggggcggctgtaccaggtcgagtatgc 74
>gb|AF121865.1|AF121865 Streptomyces avermitilis endo-1,4-beta-xylanase (xyl30) gene, complete cds Length = 2524 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccacgccgtcctcgccgccg 195 |||||||||||||||||||| Sbjct: 2398 ccacgccgtcctcgccgccg 2379
>gb|BC062233.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 1, mRNA (cDNA clone MGC:72880 IMAGE:6919336), complete cds Length = 1199 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcac 82 ||||| ||||||||||| |||| ||||||||| Sbjct: 86 atgtttcgcaaccagtatgacaacgatgtcac 117
>gb|BC090249.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta), mRNA (cDNA clone MGC:99658 IMAGE:6341766), complete cds Length = 3915 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 1251 cgccgtcctcgccgccgcca 1270
>gb|AC007192.1|AC007192 Homo sapiens chromosome 19, cosmid R27516, complete sequence Length = 38911 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cgccgtcctcgccgccgcca 198 |||||||||||||||||||| Sbjct: 25184 cgccgtcctcgccgccgcca 25203
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete sequence Length = 303438 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 210283 ccaggtggagtacgccatggaggc 210306
>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete sequence Length = 197839 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gagcccatctctactacaac 487 |||||||||||||||||||| Sbjct: 71623 gagcccatctctactacaac 71642
>gb|AC005268.1|AC005268 Drosophila melanogaster DNA sequence (P1s DS03550 (D225) and DS02397 (D206)), complete sequence Length = 89791 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ccaggtggagtatgccatggaggc 133 |||||||||||| ||||||||||| Sbjct: 69446 ccaggtggagtacgccatggaggc 69423
>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds Length = 13285 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgtcgccgaccacgccgggg 264 |||||||||||||||||||| Sbjct: 968 cgtcgccgaccacgccgggg 949
>gb|M95786.1|HAVGLYGBB Saimiri alpha-herpesvirus (isolated from Saimiri sciureus) glycoprotein gB (UL27) and capsid protein ICP18.5 (UL28) genes, complete cds Length = 3197 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gctcgccggcctcaccgccg 288 |||||||||||||||||||| Sbjct: 2635 gctcgccggcctcaccgccg 2654
>gb|M29859.1|RATPROC2A Rat proteasomes C2 component mRNA, complete cds Length = 1174 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcac 82 ||||| ||||||||||| |||| ||||||||| Sbjct: 89 atgtttcgcaaccagtatgacaacgatgtcac 120
>dbj|D90265.1|RATPSC5 Rattus norvegicus mRNA for proteasome subunit RC2 Length = 1174 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 51 atgttccgcaaccagtacgacaccgatgtcac 82 ||||| ||||||||||| |||| ||||||||| Sbjct: 89 atgtttcgcaaccagtatgacaacgatgtcac 120 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,632,624 Number of Sequences: 3902068 Number of extensions: 3632624 Number of successful extensions: 89462 Number of sequences better than 10.0: 241 Number of HSP's better than 10.0 without gapping: 248 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 85306 Number of HSP's gapped (non-prelim): 4142 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)