ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_568166.1| Cryptococcus neoformans var. neoformans JEC21 U... 82 2e-12
2gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full... 66 1e-07
3gb|AF405548.1| Cryptococcus neoformans var. neoformans UDP-gluco... 64 5e-07
4gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 64 5e-07
5gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence 56 1e-04
6gb|AY103689.1| Zea mays PCO113568 mRNA sequence 56 1e-04
7gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 52 0.002
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
9ref|XM_751172.1| Ustilago maydis 521 hypothetical protein (UM001... 52 0.002
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11gb|BT016824.1| Zea mays clone Contig657 mRNA sequence 48 0.031
12gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 48 0.031
13emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 i... 48 0.031
14ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.12
15gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 46 0.12
16dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 46 0.12
17emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 44 0.48
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
19dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.48
20dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
21dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
22gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.48
23emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.48
24gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 42 1.9
25gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 ma... 42 1.9
26gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.9
27gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Canc... 42 1.9
28ref|XM_502321.1| Yarrowia lipolytica CLIB122, YALI0D02321g predi... 42 1.9
29emb|CR354426.9| Zebrafish DNA sequence from clone DKEY-48G21 in ... 42 1.9
30ref|XM_687743.1| PREDICTED: Danio rerio similar to SI:dZ125J23.1... 42 1.9
31ref|XM_686948.1| PREDICTED: Danio rerio similar to SI:dZ125J23.1... 42 1.9
32gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete... 42 1.9
33emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 i... 42 1.9
34emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 i... 42 1.9
35gb|AC146920.3| Otolemur garnettii clone CH256-154N14, complete s... 42 1.9
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
37emb|BX649531.7| Zebrafish DNA sequence from clone CH211-285L4 in... 42 1.9
38dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
39emb|BX842686.19| Zebrafish DNA sequence from clone CH211-284L9 i... 42 1.9
40emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 i... 42 1.9
41gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, comple... 42 1.9
42emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 1.9
43gb|AC153381.2| Mus musculus 6 BAC RP23-397L23 (Roswell Park Canc... 42 1.9
44emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chr... 42 1.9
45ref|NM_188775.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
46ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.6
47gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome ... 40 7.6
48gb|AC105958.11| Mus musculus chromosome 9, clone RP24-325P4, com... 40 7.6
49gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosom... 40 7.6
50emb|CR352242.13| Zebrafish DNA sequence from clone CH211-218G4 i... 40 7.6
51gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 40 7.6
52gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 40 7.6
53emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in ... 40 7.6
54emb|AL645617.9| Human DNA sequence from clone RP11-796C22 on chr... 40 7.6
55emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on ch... 40 7.6
56emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on ch... 40 7.6
57emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chr... 40 7.6
58emb|AL138716.6| Human DNA sequence from clone CTA-KB521C9 on chr... 40 7.6
59gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cance... 40 7.6
60emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in l... 40 7.6
61emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 i... 40 7.6
62emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in ... 40 7.6
63emb|BX511207.10| Zebrafish DNA sequence from clone CH211-129L18 ... 40 7.6
64dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
65gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, comple... 40 7.6
66ref|XM_679568.1| PREDICTED: Danio rerio similar to ribosomal pro... 40 7.6
67gb|BC080250.1| Danio rerio zgc:91986, mRNA (cDNA clone MGC:91986... 40 7.6
68gb|AY129331.1| Mycobacteriophage CJW1, complete genome 40 7.6
69dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
70dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
71ref|NM_001004114.1| Danio rerio zgc:91986 (zgc:91986), mRNA 40 7.6
72gb|AC027702.18| Homo sapiens chromosome 8, clone RP11-108L9, com... 40 7.6
73emb|AL929050.6| Zebrafish DNA sequence from clone DKEYP-91C1 in ... 40 7.6
74dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
75dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
76dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
77dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
78gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, comple... 40 7.6
79emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 i... 40 7.6
80gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosom... 40 7.6
81gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, co... 40 7.6
82gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cance... 40 7.6
83emb|AJ010532.1|HBU010532 Hoplocephalus bungaroides microsatellit... 40 7.6
84gb|AC107050.3| Homo sapiens BAC clone RP11-182A9 from 4, complet... 40 7.6 
>ref|XM_568166.1| Cryptococcus neoformans var. neoformans JEC21 UDP-glucose
           6-dehydrogenase (CNL06460) partial mRNA
          Length = 1646

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 206/261 (78%)
 Strand = Plus / Plus

                                                                       
Query: 291 caacctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaa 350
           ||||||||| ||||||||||| |||||||  || || |||||||    |||||| | |||
Sbjct: 204 caacctccctatctacgagcctggtctcgatgaggttgtcaaggccaccaggggcaagaa 263

                                                                       
Query: 351 cttgttcttctcgaccgaggtcgacaagggtatcgccgaggccgacttgatcttcgtctc 410
           | | ||||||   || || || |||||||||||||  || |||||| | ||||| || ||
Sbjct: 264 cctcttcttcagcactgatgttgacaagggtatcgaggacgccgacctcatctttgtttc 323

                                                                       
Query: 411 ggtcaacacccccaccaagaagtcgggtctcggtgctggtttcgccgccgacttgaacta 470
            ||||||||||||||||||||||| ||| ||||||| || | ||| ||||||||||| | 
Sbjct: 324 cgtcaacacccccaccaagaagtctggtgtcggtgccggctacgctgccgacttgaagtt 383

                                                                       
Query: 471 catcgagttggctacccgaaggattgccgaggtttcgacctcgtccaagattgtcgtcga 530
           | |  || | || || ||| | || || |||||  | ||||| ||||| || ||||||||
Sbjct: 384 ccttcagctcgccactcgacgaatcgctgaggtcgctacctcttccaaaatcgtcgtcga 443

                                
Query: 531 gaagtcgaccgttccctgcag 551
           |||||| ||||| ||||||||
Sbjct: 444 gaagtccaccgtgccctgcag 464
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>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA
           sequence
          Length = 1858

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 294 cctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaactt 353
           |||||| |||||||||||||| ||||  || || |||||||  |||||||| | |||| |
Sbjct: 247 cctcccgatctacgagcccggcctcgatgatgttgtcaaggcctgcagggggaagaacct 306

                                                                       
Query: 354 gttcttctcgaccgaggtcgacaagggtatcgccgaggccgacttgatcttcgtctcggt 413
            ||||||   || || || || |||  | |||||||||||||| | ||||||||||| ||
Sbjct: 307 cttcttcagcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgt 366

                            
Query: 414 caacacccccaccaaga 430
            ||||||||||||||||
Sbjct: 367 gaacacccccaccaaga 383
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>gb|AF405548.1| Cryptococcus neoformans var. neoformans UDP-glucose dehydrogenase
           Ugd1p (UGD1) gene, complete cds
          Length = 2377

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 412 gtcaacacccccaccaagaagtcgggtctcggtgctggtttcgccgccgacttgaa 467
           ||||||||||||||||||||||| ||| ||||||| || | ||| |||||||||||
Sbjct: 785 gtcaacacccccaccaagaagtctggtgtcggtgccggctacgctgccgacttgaa 840



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 508 acctcgtccaagattgtcgtcgagaagtcgaccgttccctgcag 551
           ||||| ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 931 acctcttccaaaatcgtcgtcgagaagtccaccgtgccctgcag 974



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 291 caacctccccatctacgagcccggtctcg 319
           ||||||||| ||||||||||| |||||||
Sbjct: 615 caacctccctatctacgagcctggtctcg 643
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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
              sequence
          Length = 906719

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                      
Query: 412    gtcaacacccccaccaagaagtcgggtctcggtgctggtttcgccgccgacttgaa 467
              ||||||||||||||||||||||| ||| ||||||| || | ||| |||||||||||
Sbjct: 795986 gtcaacacccccaccaagaagtctggtgtcggtgccggctacgctgccgacttgaa 796041



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 508    acctcgtccaagattgtcgtcgagaagtcgaccgttccctgcag 551
              ||||| ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 796132 acctcttccaaaatcgtcgtcgagaagtccaccgtgccctgcag 796175



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 291    caacctccccatctacgagcccggtctcg 319
              ||||||||| ||||||||||| |||||||
Sbjct: 795816 caacctccctatctacgagcctggtctcg 795844
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>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence
          Length = 1682

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 383 tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
           |||| ||||| ||| | |||||||||||||| ||||||||||||||||
Sbjct: 140 tcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaaga 187
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>gb|AY103689.1| Zea mays PCO113568 mRNA sequence
          Length = 1967

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 383 tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
           |||| ||||| ||| | |||||||||||||| ||||||||||||||||
Sbjct: 399 tcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaaga 446
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>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 401   tcttcgtctcggtcaacacccccaccaaga 430
             |||||||||| |||||||||||||||||||
Sbjct: 45949 tcttcgtctccgtcaacacccccaccaaga 45920



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 294   cctccccatctacgagcccggtctcgtcgacgtcgtca 331
             ||||||||||||||||||||| || | ||| |||||||
Sbjct: 46056 cctccccatctacgagcccggcctggacgatgtcgtca 46019
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 401      tcttcgtctcggtcaacacccccaccaaga 430
                |||||||||| |||||||||||||||||||
Sbjct: 22450702 tcttcgtctccgtcaacacccccaccaaga 22450673



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 387      cgaggccgacttgatcttcgtctcggtcaacacccccaccaag 429
                |||||||||| |  |||||||||| || |||||||||||||||
Sbjct: 17586772 cgaggccgacatcgtcttcgtctccgtgaacacccccaccaag 17586814



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 294      cctccccatctacgagcccggtctcgtcgacgtcgtca 331
                ||||||||||||||||||||| || | ||| |||||||
Sbjct: 22450809 cctccccatctacgagcccggcctggacgatgtcgtca 22450772



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 301      atctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttgttcttc 360
                ||||||||||| || |||| ||| || |||||||  |||||||| |||||| | ||||||
Sbjct: 31012758 atctacgagccggggctcgacgaggtggtcaaggagtgcaggggcaggaacctcttcttc 31012817
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>ref|XM_751172.1| Ustilago maydis 521 hypothetical protein (UM00118.1) partial mRNA
          Length = 1506

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 165 ctgtatcggtgccggatacgttggaggtcccacctgtgccgttgtcgccctcaagtgtcc 224
           |||||| ||||| || |||||||| || ||||||||  ||||  ||||  ||||||||||
Sbjct: 84  ctgtattggtgctggctacgttggtggccccacctgctccgtaatcgcattcaagtgtcc 143

                         
Query: 225 ccacatccaggtca 238
           ||||||| ||||||
Sbjct: 144 ccacatcaaggtca 157
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 401      tcttcgtctcggtcaacacccccaccaaga 430
                |||||||||| |||||||||||||||||||
Sbjct: 22443731 tcttcgtctccgtcaacacccccaccaaga 22443702



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 387      cgaggccgacttgatcttcgtctcggtcaacacccccaccaag 429
                |||||||||| |  |||||||||| || |||||||||||||||
Sbjct: 17580313 cgaggccgacatcgtcttcgtctccgtgaacacccccaccaag 17580355



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 294      cctccccatctacgagcccggtctcgtcgacgtcgtca 331
                ||||||||||||||||||||| || | ||| |||||||
Sbjct: 22443838 cctccccatctacgagcccggcctggacgatgtcgtca 22443801



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 301      atctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttgttcttc 360
                ||||||||||| || |||| ||| || |||||||  |||||||| |||||| | ||||||
Sbjct: 31103281 atctacgagccggggctcgacgaggtggtcaaggagtgcaggggcaggaacctcttcttc 31103340
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>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence
          Length = 1951

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 383 tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
           |||| ||||| ||| | ||||| |||||||| ||||||||||||||||
Sbjct: 396 tcgctgaggctgacattatctttgtctcggtgaacacccccaccaaga 443
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>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 383    tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
              |||| ||||| ||| | ||||| |||||||| ||||||||||||||||
Sbjct: 141952 tcgctgaggctgacattatctttgtctcggtgaacacccccaccaaga 141999
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>emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 in linkage group 15,
              complete sequence
          Length = 151595

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 103    tttcttttaaacacacacatacat 126
              ||||||||||||||||||||||||
Sbjct: 106322 tttcttttaaacacacacatacat 106345
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>ref|XM_468764.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 387 cgaggccgacttgatcttcgtctcggtcaacacccccaccaag 429
           |||||||||| |  |||||||||| || |||||||||||||||
Sbjct: 231 cgaggccgacatcgtcttcgtctccgtgaacacccccaccaag 273
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 387   cgaggccgacttgatcttcgtctcggtcaacacccccaccaag 429
             |||||||||| |  |||||||||| || |||||||||||||||
Sbjct: 68305 cgaggccgacatcgtcttcgtctccgtgaacacccccaccaag 68263
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 516     caagattgtcgtcgagaagtcgaccgt 542
               |||||||||||| ||||||||||||||
Sbjct: 1461483 caagattgtcgtggagaagtcgaccgt 1461457
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 267   cgacgcctggaacgaccccgacttca 292
             ||||||||||||| ||||||||||||
Sbjct: 60565 cgacgcctggaacaaccccgacttca 60590
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 295      ctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttg 354
                ||||| ||||||||||||||||| |  || || || |||| ||||||||| |||||| | 
Sbjct: 14939010 ctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcaggaacctc 14939069

                      
Query: 355      ttcttc 360
                ||||||
Sbjct: 14939070 ttcttc 14939075



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 383      tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
                ||||||||||  || | ||||| || || |||||||||||||||||||
Sbjct: 14933222 tcgccgaggcgaacatcatctttgtatctgtcaacacccccaccaaga 14933269
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 271     gcctggaacgaccccgacttca 292
               ||||||||||||||||||||||
Sbjct: 3850601 gcctggaacgaccccgacttca 3850580



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 233     aggtcaccatcgtcgacgtcaaccagtc 260
               |||| ||||||| |||||||||||||||
Sbjct: 3828210 aggtgaccatcgccgacgtcaaccagtc 3828237
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>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full
           insert sequence
          Length = 1774

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 295 ctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttg 354
           ||||| ||||||||||||||||| |  || || || |||| ||||||||| |||||| | 
Sbjct: 245 ctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcaggaacctc 304

                 
Query: 355 ttcttc 360
           ||||||
Sbjct: 305 ttcttc 310
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>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full
           insert sequence
          Length = 1824

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 295 ctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttg 354
           ||||| ||||||||||||||||| |  || || || |||| ||||||||| |||||| | 
Sbjct: 374 ctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcaggaacctc 433

                 
Query: 355 ttcttc 360
           ||||||
Sbjct: 434 ttcttc 439
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 295      ctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttg 354
                ||||| ||||||||||||||||| |  || || || |||| ||||||||| |||||| | 
Sbjct: 14893293 ctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcaggaacctc 14893352

                      
Query: 355      ttcttc 360
                ||||||
Sbjct: 14893353 ttcttc 14893358



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 383      tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
                ||||||||||  || | ||||| || || |||||||||||||||||||
Sbjct: 14887505 tcgccgaggcgaacatcatctttgtatctgtcaacacccccaccaaga 14887552
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>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 174521

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                          
Query: 295    ctccccatctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttg 354
              ||||| ||||||||||||||||| |  || || || |||| ||||||||| |||||| | 
Sbjct: 142837 ctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcaggaacctc 142778

                    
Query: 355    ttcttc 360
              ||||||
Sbjct: 142777 ttcttc 142772



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 383    tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
              ||||||||||  || | ||||| || || |||||||||||||||||||
Sbjct: 148625 tcgccgaggcgaacatcatctttgtatctgtcaacacccccaccaaga 148578
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    acacacacatacattccacta 133
              |||||||||||||||||||||
Sbjct: 769620 acacacacatacattccacta 769640
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>gb|AC127171.54| Mus musculus strain C57BL/6J clone rp23-202i7 map 10, complete sequence
          Length = 194193

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   tcttttaaacacacacataca 125
             |||||||||||||||||||||
Sbjct: 35077 tcttttaaacacacacataca 35097
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 521     ttgtcgtcgagaagtcgaccgttcc 545
               ||||||||||||| |||||||||||
Sbjct: 1540285 ttgtcgtcgagaattcgaccgttcc 1540309
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>gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 172372

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 97    aaacactttcttttaaacacacacataca 125
             |||||||||||||||  ||||||||||||
Sbjct: 66783 aaacactttcttttatgcacacacataca 66755
to top
>ref|XM_502321.1| Yarrowia lipolytica CLIB122, YALI0D02321g predicted mRNA
          Length = 1464

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 298 cccatctacgagcccggtctcgtcgacgt 326
           |||||||| |||||||||||| |||||||
Sbjct: 196 cccatctatgagcccggtctcttcgacgt 224
to top
>emb|CR354426.9| Zebrafish DNA sequence from clone DKEY-48G21 in linkage group 1, complete
              sequence
          Length = 196432

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 273    ctggaacgaccccgacttcaa 293
              |||||||||||||||||||||
Sbjct: 155434 ctggaacgaccccgacttcaa 155454
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>ref|XM_687743.1| PREDICTED: Danio rerio similar to SI:dZ125J23.11 (Gypsy polyprotein)
            (LOC564405), mRNA
          Length = 4403

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  ctggaacgaccccgacttcaa 293
            |||||||||||||||||||||
Sbjct: 1060 ctggaacgaccccgacttcaa 1040
to top
>ref|XM_686948.1| PREDICTED: Danio rerio similar to SI:dZ125J23.11 (Gypsy polyprotein)
            (LOC563585), mRNA
          Length = 4403

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  ctggaacgaccccgacttcaa 293
            |||||||||||||||||||||
Sbjct: 1060 ctggaacgaccccgacttcaa 1040
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>gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete sequence
          Length = 98394

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 172   ggtgccggatacgttggaggtcccacctgtgcc 204
             ||||||||||||||||| || ||||| ||||||
Sbjct: 65812 ggtgccggatacgttggtggacccacatgtgcc 65844
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>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22,
             complete sequence
          Length = 221392

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   ctggaacgaccccgacttcaa 293
             |||||||||||||||||||||
Sbjct: 75415 ctggaacgaccccgacttcaa 75435
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>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16,
             complete sequence
          Length = 211279

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   cttttaaacacacacatacat 126
             |||||||||||||||||||||
Sbjct: 60930 cttttaaacacacacatacat 60910
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>gb|AC146920.3| Otolemur garnettii clone CH256-154N14, complete sequence
          Length = 163387

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   acacacacatacattccacta 133
             |||||||||||||||||||||
Sbjct: 43816 acacacacatacattccacta 43836
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 103     tttcttttaaacacacacatacattccactaca 135
               ||||||||||||| ||||||||||  |||||||
Sbjct: 2153624 tttcttttaaacatacacatacatatcactaca 2153656
to top
>emb|BX649531.7| Zebrafish DNA sequence from clone CH211-285L4 in linkage group 15,
             complete sequence
          Length = 185865

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   ctggaacgaccccgacttcaa 293
             |||||||||||||||||||||
Sbjct: 51091 ctggaacgaccccgacttcaa 51071
to top
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 103   tttcttttaaacacacacatacattccactaca 135
             ||||||||||||| ||||||||||  |||||||
Sbjct: 68317 tttcttttaaacatacacatacatatcactaca 68349
to top
>emb|BX842686.19| Zebrafish DNA sequence from clone CH211-284L9 in linkage group 4,
             complete sequence
          Length = 71843

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   ctggaacgaccccgacttcaa 293
             |||||||||||||||||||||
Sbjct: 70853 ctggaacgaccccgacttcaa 70833
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>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4,
              complete sequence
          Length = 152900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 273    ctggaacgaccccgacttcaa 293
              |||||||||||||||||||||
Sbjct: 151891 ctggaacgaccccgacttcaa 151911
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>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence
          Length = 203369

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     ccaaacactttcttttaaaca 115
              |||||||||||||||||||||
Sbjct: 108873 ccaaacactttcttttaaaca 108853
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 298    cccatctacgagcccggtctcgtcgacgt 326
              |||||||| |||||||||||| |||||||
Sbjct: 277855 cccatctatgagcccggtctcttcgacgt 277827
to top
>gb|AC153381.2| Mus musculus 6 BAC RP23-397L23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196902

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 97    aaacactttcttttaaacacacacataca 125
             |||||||||||||||  ||||||||||||
Sbjct: 54314 aaacactttcttttatgcacacacataca 54342
to top
>emb|AL626773.18| Mouse DNA sequence from clone RP23-273M9 on chromosome 4, complete
              sequence
          Length = 193852

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    tcttttaaacacacacataca 125
              |||||||||||||||||||||
Sbjct: 144069 tcttttaaacacacacataca 144089
to top
>ref|NM_188775.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 acttcaacctccccatctacgagc 310
           |||||||||||| |||||||||||
Sbjct: 401 acttcaacctcctcatctacgagc 424
to top
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 atctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttgttcttc 360
           ||||||||||| || |||| ||| || |||||||  |||||||| |||||| | ||||||
Sbjct: 352 atctacgagccggggctcgacgaggtggtcaaggagtgcaggggcaggaacctcttcttc 411
to top
>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 99    acactttcttttaaacacacacatacat 126
             ||||||||||||| ||||||||| ||||
Sbjct: 48651 acactttcttttatacacacacacacat 48624
to top
>gb|AC105958.11| Mus musculus chromosome 9, clone RP24-325P4, complete sequence
          Length = 195129

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   ttttaaacacacacatacat 126
             ||||||||||||||||||||
Sbjct: 78304 ttttaaacacacacatacat 78285
to top
>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 99     acactttcttttaaacacacacatacat 126
              ||||||||||||| ||||||||| ||||
Sbjct: 128055 acactttcttttatacacacacacacat 128028
to top
>emb|CR352242.13| Zebrafish DNA sequence from clone CH211-218G4 in linkage group 23,
             complete sequence
          Length = 123503

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cttttaaacacacacataca 125
             ||||||||||||||||||||
Sbjct: 99809 cttttaaacacacacataca 99828
to top
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   acttcaacctccccatctacgagc 310
             |||||||||||| |||||||||||
Sbjct: 90347 acttcaacctcctcatctacgagc 90324
to top
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
             genomic sequence, complete sequence
          Length = 168759

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 301   atctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttgttcttc 360
             ||||||||||| || |||| ||| || |||||||  |||||||| |||||| | ||||||
Sbjct: 83306 atctacgagccggggctcgacgaggtggtcaaggagtgcaggggcaggaacctcttcttc 83247
to top
>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15,
             complete sequence
          Length = 115533

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   acacacacatacattccact 132
             ||||||||||||||||||||
Sbjct: 66955 acacacacatacattccact 66936
to top
>emb|AL645617.9| Human DNA sequence from clone RP11-796C22 on chromosome 10 Contains
             part of the UPF2 gene for UPF2 regulator of nonsense
             transcripts homolog (yeast) (FLJ38872), complete sequence
          Length = 76287

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    actcttctccccaaaacaac 92
             ||||||||||||||||||||
Sbjct: 22677 actcttctccccaaaacaac 22696
to top
>emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on chromosome 1 Contains the
              gene for protein related to DAN and cerberus (FLJ21195),
              two novel genes, a pseudogene similar to part of cytochrome
              c oxidase I (MTCOI1), a ribosomal protein S11 (RPS11)
              pseudogene, a ferredoxin pseudogene and a CpG island,
              complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    tttcttttaaacacacacat 122
              ||||||||||||||||||||
Sbjct: 152827 tttcttttaaacacacacat 152808
to top
>emb|AL356956.11| Human DNA sequence from clone RP11-538A16 on chromosome 6 Contains an
             activating transcription factor 1 (ATF1) pseudogene,
             complete sequence
          Length = 194264

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   ctttcttttaaacacacacataca 125
             |||||||||| |||||||||||||
Sbjct: 64274 ctttcttttacacacacacataca 64297
to top
>emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 179497

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cttttaaacacacacataca 125
             ||||||||||||||||||||
Sbjct: 96404 cttttaaacacacacataca 96423
to top
>emb|AL138716.6| Human DNA sequence from clone CTA-KB521C9 on chromosome 6, complete
             sequence
          Length = 55319

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   tttcttttaaacacacacatacat 126
             ||||||||||||||| ||||||||
Sbjct: 15850 tttcttttaaacacatacatacat 15873
to top
>gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 210578

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    acacacacatacattccact 132
              ||||||||||||||||||||
Sbjct: 167160 acacacacatacattccact 167141
to top
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6,
             complete sequence
          Length = 220671

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ttttaaacacacacatacat 126
             ||||||||||||||||||||
Sbjct: 21070 ttttaaacacacacatacat 21089
to top
>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains
              the gene for a novel protein (zgc:56546), the gene for a
              novel protein similar to the Tctex-1 family, the gene for a
              novel protein similar to vertebrate tubby like protein 4
              (TULP4), the gene for a novel protein similar to vertebrate
              mitochondrial ribosomal protein S10 (MRPS10), the 3' end of
              a novel gene, two novel genes and three CpG islands,
              complete sequence
          Length = 189764

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     accaaacactttcttttaaa 113
              ||||||||||||||||||||
Sbjct: 106551 accaaacactttcttttaaa 106532
to top
>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains
             part of the gene for a novel protein similar to vertebrate
             atrophin-1 interacting protein (AIP1) and a CpG island,
             complete sequence
          Length = 263517

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 94    accaaacactttcttttaaacaca 117
             ||||||||||||||| ||||||||
Sbjct: 94466 accaaacactttcttataaacaca 94489
to top
>emb|BX511207.10| Zebrafish DNA sequence from clone CH211-129L18 in linkage group 25,
             complete sequence
          Length = 128243

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   tttaaacacacacatacatt 127
             ||||||||||||||||||||
Sbjct: 43643 tttaaacacacacatacatt 43624
to top
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0004G10
          Length = 150379

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 287    acttcaacctccccatctacgagc 310
              |||||||||||| |||||||||||
Sbjct: 122885 acttcaacctcctcatctacgagc 122862
to top
>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence
          Length = 182440

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttttaaacacacacatacat 126
              ||||||||||||||||||||
Sbjct: 163600 ttttaaacacacacatacat 163581
to top
>ref|XM_679568.1| PREDICTED: Danio rerio similar to ribosomal protein L18a,
           transcript variant 1 (LOC573049), mRNA
          Length = 1145

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  accaaacactttcttttaaa 113
           ||||||||||||||||||||
Sbjct: 553 accaaacactttcttttaaa 572
to top
>gb|BC080250.1| Danio rerio zgc:91986, mRNA (cDNA clone MGC:91986 IMAGE:7042657),
            complete cds
          Length = 4545

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  cttttaaacacacacataca 125
            ||||||||||||||||||||
Sbjct: 4164 cttttaaacacacacataca 4183
to top
>gb|AY129331.1| Mycobacteriophage CJW1, complete genome
          Length = 75931

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   cgacgtcgtcaagggatgca 340
             ||||||||||||||||||||
Sbjct: 47457 cgacgtcgtcaagggatgca 47476
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 287     acttcaacctccccatctacgagc 310
               |||||||||||| |||||||||||
Sbjct: 8126234 acttcaacctcctcatctacgagc 8126211
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C11
          Length = 139399

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   acttcaacctccccatctacgagc 310
             |||||||||||| |||||||||||
Sbjct: 43952 acttcaacctcctcatctacgagc 43929
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>ref|NM_001004114.1| Danio rerio zgc:91986 (zgc:91986), mRNA
          Length = 4545

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  cttttaaacacacacataca 125
            ||||||||||||||||||||
Sbjct: 4164 cttttaaacacacacataca 4183
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>gb|AC027702.18| Homo sapiens chromosome 8, clone RP11-108L9, complete sequence
          Length = 125719

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    cccagactcttctccccaaa 87
             ||||||||||||||||||||
Sbjct: 54874 cccagactcttctccccaaa 54893
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>emb|AL929050.6| Zebrafish DNA sequence from clone DKEYP-91C1 in linkage group 17,
             complete sequence
          Length = 196743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   tttaaacacacacatacatt 127
             ||||||||||||||||||||
Sbjct: 63781 tttaaacacacacatacatt 63762
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>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full
           insert sequence
          Length = 1865

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 383 tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
           ||||||||||  || | ||||| || || |||||||||||||||||||
Sbjct: 347 tcgccgaggcgaacatcatctttgtatctgtcaacacccccaccaaga 394
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>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full
           insert sequence
          Length = 1852

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 383 tcgccgaggccgacttgatcttcgtctcggtcaacacccccaccaaga 430
           ||||||||||  || | ||||| || || |||||||||||||||||||
Sbjct: 347 tcgccgaggcgaacatcatctttgtatctgtcaacacccccaccaaga 394
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>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full
           insert sequence
          Length = 1946

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 atctacgagcccggtctcgtcgacgtcgtcaagggatgcaggggtaggaacttgttcttc 360
           ||||||||||| || |||| ||| || |||||||  |||||||| |||||| | ||||||
Sbjct: 257 atctacgagccggggctcgacgaggtggtcaaggagtgcaggggcaggaacctcttcttc 316
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>dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J11, full
           insert sequence
          Length = 1586

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 acttcaacctccccatctacgagc 310
           |||||||||||| |||||||||||
Sbjct: 689 acttcaacctcctcatctacgagc 712
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>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence
          Length = 160193

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ttaaacacacacatacattc 128
             ||||||||||||||||||||
Sbjct: 57703 ttaaacacacacatacattc 57722
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>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    accaaacactttcttttaaa 113
             ||||||||||||||||||||
Sbjct: 94957 accaaacactttcttttaaa 94976
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>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete
             sequence
          Length = 178741

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ttaaacacacacatacattc 128
             ||||||||||||||||||||
Sbjct: 87127 ttaaacacacacatacattc 87146
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>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence
          Length = 228289

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 98     aacactttcttttaaacacacaca 121
              |||| |||||||||||||||||||
Sbjct: 110770 aacagtttcttttaaacacacaca 110747
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>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195726

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     cccaaaacaactaccaaaca 101
              ||||||||||||||||||||
Sbjct: 132914 cccaaaacaactaccaaaca 132933
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>emb|AJ010532.1|HBU010532 Hoplocephalus bungaroides microsatellite sequence, clone 30
          Length = 482

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 ctttcttttaaacacacaca 121
           ||||||||||||||||||||
Sbjct: 77  ctttcttttaaacacacaca 96
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>gb|AC107050.3| Homo sapiens BAC clone RP11-182A9 from 4, complete sequence
          Length = 167699

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    accaaacactttcttttaaa 113
             ||||||||||||||||||||
Sbjct: 42665 accaaacactttcttttaaa 42646


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,494,397
Number of Sequences: 3902068
Number of extensions: 4494397
Number of successful extensions: 131429
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130838
Number of HSP's gapped (non-prelim): 591
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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