Clone Name | bart29g03 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein) | 108 | 1e-23 | 2 | DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re... | 31 | 2.1 | 3 | DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-re... | 30 | 3.6 |
---|
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 108 bits (269), Expect = 1e-23 Identities = 74/163 (45%), Positives = 76/163 (46%), Gaps = 8/163 (4%) Frame = +3 Query: 93 MEDERSTQSYQGAEA-DQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX--- 260 MEDERSTQSYQG EA +QVEVTDR VTGM Sbjct: 1 MEDERSTQSYQGGEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEV 60 Query: 261 -XXXXXDGEKKETLFSKLHRXXXXXXXXXXXXXXXXVIDENXXXXXXXXXXXXXXXXXXX 437 DGEKKETLFSKLHR VID+N Sbjct: 61 KKEEHEDGEKKETLFSKLHRSSSSSSSSSDEEEEE-VIDDNGEVIKRKKKKGLKEKLQGK 119 Query: 438 XXXXXDNEAEHVTGLPAPMAPASVQT---HHDTDVVVEKIGGD 557 D E EHVTGLPAP APASVQT HHDTDVVVEKI GD Sbjct: 120 LPGHKDTEGEHVTGLPAPAAPASVQTHGGHHDTDVVVEKIDGD 162
>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) (mDia3) Length = 1098 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -1 Query: 165 GPCPSPPPDRPQLPGMTGCSSHPP 94 GPCP PPP P P + G PP Sbjct: 556 GPCPPPPPPPPPPPPLPGVVPPPP 579
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -1 Query: 162 PCPSPPPDRPQLPGMTGCSSHPP 94 P P PPP P LPG T S PP Sbjct: 601 PPPPPPPPPPPLPGGTAISPPPP 623 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,576,530 Number of Sequences: 219361 Number of extensions: 605248 Number of successful extensions: 3170 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2470 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3091 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)