ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29f07 |
|---|---|
| Clone Library Name | barley_pub |
>MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL)| Length = 303 Score = 67.8 bits (164), Expect = 2e-11 Identities = 47/131 (35%), Positives = 64/131 (48%) Frame = +3 Query: 168 NARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGH 347 NA G LF CR+ P G KA +F+ HG C L V+ D GH Sbjct: 24 NADGQYLF-CRYWKPSGT-PKALIFVSHGAGEHCG-RYDELAHMLKGLDMLVFAHDHVGH 80 Query: 348 GRSEGLQGYVPSLDVLVXXXXXXXXXXXXXXXNTDLPRFLLGESMGGAVALLLHRMRPSY 527 G+SEG + V V V D+P FLLG SMGGA+++L+ RP+Y Sbjct: 81 GQSEGERMVVSDFQVFVRDVLQHVDTIQKDY--PDVPIFLLGHSMGGAISILVAAERPTY 138 Query: 528 WTGAVLVAPMV 560 ++G VL++P+V Sbjct: 139 FSGMVLISPLV 149
>MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL)| Length = 303 Score = 64.3 bits (155), Expect = 2e-10 Identities = 43/131 (32%), Positives = 64/131 (48%) Frame = +3 Query: 168 NARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGH 347 NA G LF CR+ P G KA +F+ HG C L + V+ D GH Sbjct: 24 NADGQYLF-CRYWKPSGT-PKALIFVSHGAGEHCG-RYDELAQMLKRLDMLVFAHDHVGH 80 Query: 348 GRSEGLQGYVPSLDVLVXXXXXXXXXXXXXXXNTDLPRFLLGESMGGAVALLLHRMRPSY 527 G+SEG + V V V ++P FLLG SMGGA+++L RP++ Sbjct: 81 GQSEGERMVVSDFQVFVRDLLQHVNTVQKDY--PEVPVFLLGHSMGGAISILAAAERPTH 138 Query: 528 WTGAVLVAPMV 560 ++G +L++P++ Sbjct: 139 FSGMILISPLI 149
>MGLL_HUMAN (Q99685) Monoglyceride lipase (EC 3.1.1.23) (MGL) (HU-K5)| (Lysophospholipase homolog) (Lysophospholipase-like) Length = 303 Score = 63.5 bits (153), Expect = 4e-10 Identities = 49/131 (37%), Positives = 62/131 (47%) Frame = +3 Query: 168 NARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGH 347 NA G LF CR+ P G KA +F+ HG A E S L V+ D GH Sbjct: 24 NADGQYLF-CRYWKPTGT-PKALIFVSHG-AGEHSGRYEELARMLMGLDLLVFAHDHVGH 80 Query: 348 GRSEGLQGYVPSLDVLVXXXXXXXXXXXXXXXNTDLPRFLLGESMGGAVALLLHRMRPSY 527 G+SEG + V V V LP FLLG SMGGA+A+L RP + Sbjct: 81 GQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPG--LPVFLLGHSMGGAIAILTAAERPGH 138 Query: 528 WTGAVLVAPMV 560 + G VL++P+V Sbjct: 139 FAGMVLISPLV 149
>AB14B_MOUSE (Q8VCR7) Abhydrolase domain-containing protein 14B| (CCG1-interacting factor B) Length = 210 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +3 Query: 150 EEESVQNARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMR-GTGVRLAQAGYAVY 326 + E +G LF P GQ V+ V L HG GT RLA+AGY Sbjct: 6 QHEGTIQVQGQNLFFRETRPGSGQPVRFSVLLLHGIRFSSETWQNLGTLQRLAEAGYRAV 65 Query: 327 GVDFEGHGRSE 359 +D G GRS+ Sbjct: 66 AIDLPGLGRSK 76
>PPME1_CANAL (Q5ALW7) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 360 Score = 37.4 bits (85), Expect = 0.029 Identities = 34/124 (27%), Positives = 46/124 (37%) Frame = +3 Query: 153 EESVQNARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGV 332 +E +N G K F + P K + CH A S+T + ++ Sbjct: 67 QEFYENELGHK-FKTYYKPSKKP---GSILFCHHGAGSSSMTFGNLVNHIEDESVGIFLF 122 Query: 333 DFEGHGRSEGLQGYVPSLDVLVXXXXXXXXXXXXXXXNTDLPRFLLGESMGGAVALLLHR 512 D GHG S + SLD LV T + FLLG S+GGAV Sbjct: 123 DTRGHGESVATSDF--SLDTLVQDVSFVLEQFSSKHQQTSI--FLLGHSLGGAVLAKYST 178 Query: 513 MRPS 524 + PS Sbjct: 179 LYPS 182
>AB14B_HUMAN (Q96IU4) Abhydrolase domain-containing protein 14B| (CCG1-interacting factor B) Length = 210 Score = 37.0 bits (84), Expect = 0.038 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +3 Query: 138 SYEYEEESVQNARGMKLFTCRWLPPKGQIVKAHVFLCHGYAVECSVTMR-GTGVRLAQAG 314 S E E ++Q +G LF LP GQ + V L HG GT RLAQAG Sbjct: 4 SVEQREGTIQ-VQGQALFFREALPGSGQ-ARFSVLLLHGIRFSSETWQNLGTLHRLAQAG 61 Query: 315 YAVYGVDFEGHGRSE 359 Y +D G G S+ Sbjct: 62 YRAVAIDLPGLGHSK 76
>YPT2_ECOLI (Q99390) Hypothetical 31.7 kDa protein in traX-finO intergenic| region (ORFC) Length = 286 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +3 Query: 210 PKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRSEGLQG-YVPSL 386 P+G I + LCHG+ +V + +AG+A D+ G G S+G +G VP++ Sbjct: 19 PEGNIKHPLIILCHGFCGIRNVLLPCFANAFTEAGFATITFDYRGFGESDGERGRLVPAM 78
>YPT1_ECOLI (P29368) Hypothetical 31.7 kDa protein in traX-finO intergenic| region Length = 286 Score = 36.2 bits (82), Expect = 0.066 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +3 Query: 210 PKGQIVKAHVFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRSEGLQG-YVPSL 386 P+G I + LCHG+ +V + +AG+A D+ G G S+G +G VP++ Sbjct: 19 PEGNIKHPLIILCHGFCGIRNVLLPCFANAFTEAGFATITFDYRGFGESDGERGRLVPAM 78
>AB14B_PONPY (Q5R816) Abhydrolase domain-containing protein 14B| (CCG1-interacting factor B) Length = 210 Score = 35.8 bits (81), Expect = 0.086 Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +3 Query: 138 SYEYEEESVQNARGMKLFTCRWLPPKGQIVKAH--VFLCHGYAVECSVTMR-GTGVRLAQ 308 S E E+++Q +G LF P GQ AH V L HG GT +LAQ Sbjct: 4 SVEQREDTIQ-VQGQALFFREARPGSGQ---AHFSVLLLHGIRFSSETWQNLGTLHQLAQ 59 Query: 309 AGYAVYGVDFEGHGRSE 359 AGY +D G GRS+ Sbjct: 60 AGYRAVAIDLPGLGRSK 76
>ESL2_MYCGE (Q49418) Putative esterase/lipase 2 (EC 3.1.-.-)| Length = 268 Score = 35.0 bits (79), Expect = 0.15 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +3 Query: 465 LLGESMGGAVALLLHRMRPSYWTGAVLVAPMVQ 563 L+G SMGGAVA+L++++ P +LVAPM Q Sbjct: 94 LIGHSMGGAVAVLVNKVIPLKIKALILVAPMNQ 126
>YNBC_ECOLI (P76092) Hypothetical protein ynbC| Length = 585 Score = 32.0 bits (71), Expect = 1.2 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +3 Query: 300 LAQAGYAVYGVDFEGHGRSEGLQGYVPSL 386 LA A Y D GHG+S G +GY PSL Sbjct: 56 LAMPDTAFYAWDARGHGKSSGPRGYSPSL 84
>HYES_HUMAN (P34913) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 555 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +3 Query: 237 VFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRS 356 V LCHG+ E + R LAQAGY V +D +G+G S Sbjct: 261 VCLCHGFP-ESWYSWRYQIPALAQAGYRVLAMDMKGYGES 299
>SYA_MYCPE (Q8EUR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 930 Score = 31.6 bits (70), Expect = 1.6 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +3 Query: 132 DGSYEYEEESVQNARGMKLFTCRWLP 209 D S++YE ESV+N++ +K+F W P Sbjct: 491 DSSFDYEIESVKNSKVLKIFDENWKP 516
>HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 555 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +3 Query: 237 VFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRS 356 V LCHG+ E + R LAQAG+ V VD +G+G S Sbjct: 261 VCLCHGFP-ESWFSWRYQIPALAQAGFRVLAVDMKGYGES 299
>ESL2_MYCPN (P75311) Putative esterase/lipase 2 (EC 3.1.-.-)| Length = 268 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +3 Query: 465 LLGESMGGAVALLLHRMRPSYWTGAVLVAPMVQ 563 L+G SMGGA+A+L++ + VLVAPM Q Sbjct: 93 LVGHSMGGAIAVLVNAVLRERIKALVLVAPMNQ 125
>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)| Length = 463 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 116 QRRRGGWQLRVRGGV-GAER---PRDEALHLQMAPPQGPDSQGPRFPLP 250 QR G ++RGG G +R P L M PP GP GPR P P Sbjct: 205 QRHPGNNPNQIRGGFNGFQRGPPPNRPPPRLMMGPPMGPMGPGPRGPGP 253
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 30.4 bits (67), Expect = 3.6 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +2 Query: 137 QLRVRGGVGAERPRDEALHLQMAP--PQGPDSQGP 235 QLR R G+ RPR + +M P P G DS+GP Sbjct: 363 QLRARARAGSVRPRGQPTPGEMLPSLPVGSDSEGP 397
>HYES_RAT (P80299) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +3 Query: 237 VFLCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRS 356 + LCHG+ E + R LAQAG+ V +D +G+G S Sbjct: 259 ICLCHGFP-ESWFSWRYQIPALAQAGFRVLAIDMKGYGDS 297
>YBOXH_APLCA (P41824) Y-box factor homolog (APY1)| Length = 253 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 113 RQRRRGGWQLRVRGGVGAERPRDE 184 R+ RRGGW R RGG RPR + Sbjct: 117 RRFRRGGWYPRFRGGGRGGRPRQD 140
>PLDB_ECOLI (P07000) Lysophospholipase L2 (EC 3.1.1.5) (Lecithinase B)| Length = 340 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 459 RFLLGESMGGAVALLLHRMRPSYWTGAVLVAPM 557 R++L SMGGA++ L + P L APM Sbjct: 133 RYILAHSMGGAISTLFLQRHPGVCDAIALTAPM 165
>PLDB_ECOL6 (P59588) Lysophospholipase L2 (EC 3.1.1.5) (Lecithinase B)| Length = 340 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 459 RFLLGESMGGAVALLLHRMRPSYWTGAVLVAPM 557 R++L SMGGA++ L + P L APM Sbjct: 133 RYILAHSMGGAISTLFLQRHPGVCDAIALTAPM 165
>HYES_MOUSE (P34914) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide| hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH) Length = 554 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 243 LCHGYAVECSVTMRGTGVRLAQAGYAVYGVDFEGHGRS 356 LCHG+ E + R LAQAG+ V +D +G+G S Sbjct: 261 LCHGFP-ESWFSWRYQIPALAQAGFRVLAIDMKGYGDS 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,517,644 Number of Sequences: 219361 Number of extensions: 801906 Number of successful extensions: 3495 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3363 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3487 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
