ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK108370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
2gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 202 9e-49
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 202 9e-49
4gb|AY111042.1| Zea mays CL5360_1 mRNA sequence 167 5e-38
5gb|AC152056.17| Glycine max clone gmp1-98f7, complete sequence 48 0.032
6ref|XM_970412.1| PREDICTED: Tribolium castaneum similar to trans... 48 0.032
7gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence 48 0.032
8gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete s... 46 0.13
9gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete s... 46 0.13
10gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete s... 46 0.13
11ref|NM_188094.1| Oryza sativa (japonica cultivar-group), Ozsa852... 44 0.51
12gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete... 44 0.51
13gb|AC121901.2| Mus musculus BAC clone RP24-168D2 from 6, complet... 44 0.51
14gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome... 44 0.51
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
16gb|AC008189.3|AC008189 Drosophila melanogaster, chromosome 3R, r... 44 0.51
17dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
18dbj|AK071739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
19gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 ... 44 0.51
20ref|XM_592539.2| PREDICTED: Bos taurus similar to family with se... 42 2.0
21ref|XM_872327.1| PREDICTED: Bos taurus similar to family with se... 42 2.0
22emb|CR956374.5| Pig DNA sequence from clone CH242-153C17 on chro... 42 2.0
23ref|XM_310741.2| Anopheles gambiae str. PEST ENSANGP00000021947 ... 42 2.0
24gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.9
25gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.9
26ref|XM_612696.2| PREDICTED: Bos taurus similar to F31D4.2 (LOC54... 40 7.9
27ref|XM_817380.1| Trypanosoma brucei TREU927 hypothetical protein... 40 7.9
28ref|XM_572397.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.9
29ref|XM_799872.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 7.9
30gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome ... 40 7.9
31gb|AC151742.9| Medicago truncatula clone mth2-83e4, complete seq... 40 7.9
32gb|AC138451.15| Medicago truncatula clone mth2-24k1, complete se... 40 7.9
33gb|AC146909.23| Medicago truncatula clone mth2-57e16, complete s... 40 7.9
34emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
35emb|AL606525.7| Mouse DNA sequence from clone RP23-235J20 on chr... 40 7.9
36gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 40 7.9
37gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chrom... 40 7.9
38gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, compl... 40 7.9
39gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 40 7.9
40gb|AC092811.2| Homo sapiens chromosome 1 clone RP11-496N12, comp... 40 7.9
41gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.9
42gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, c... 40 7.9
43dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
45emb|BX247864.10| Zebrafish DNA sequence from clone CH211-225P16,... 40 7.9
46gb|AC154468.2| Mus musculus BAC clone RP24-157D1 from chromosome... 40 7.9
47gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 40 7.9
48gb|AC025157.18| Homo sapiens 12 BAC RP11-401I10 (Roswell Park Ca... 40 7.9
49dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.9
50gb|AC113174.3| Homo sapiens chromosome 1 clone RP11-397A15, comp... 40 7.9
51dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
52ref|XM_309752.2| Anopheles gambiae str. PEST ENSANGP00000012577 ... 40 7.9
53gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2... 40 7.9
54ref|NM_211789.1| Eremothecium gossypii AGR062Cp (AGR062C), mRNA 40 7.9
55gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 7.9
56emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in ... 40 7.9 
>dbj|AK108370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D07, full
           insert sequence
          Length = 848

 Score =  248 bits (125), Expect = 2e-62
 Identities = 200/225 (88%)
 Strand = Plus / Plus

                                                                       
Query: 334 cagccttgggaccaagccgttgcagatatgggacaaggaagttgttgatgggcacatcaa 393
           |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1   cagccttgggaccaagcctttgcagatatgggataaggaagttgtagatgggcacatcaa 60

                                                                       
Query: 394 aaggcctcaggatgaagatattaagtctaacgtacttgagattgttggaacaaatgtgca 453
           ||||||||||||||| |||||  ||||||| |||||||| ||| || |||||||||||||
Sbjct: 61  aaggcctcaggatgaggatatccagtctaatgtacttgaaattattagaacaaatgtgca 120

                                                                       
Query: 454 gtcaacctacatcacttgcccagctgaccctgctgccactcttggaattaagcttccatt 513
            || || ||||| || ||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 121 atcgacttacattacctgcccggctgatcctgctgctactcttggaattaaacttccatt 180

                                                        
Query: 514 tcttgccctcatcgtgaagaatcttaaaaaatacttcacatttga 558
           ||||||  | ||||||||||||| ||| || ||||||||||||||
Sbjct: 181 tcttgctttaatcgtgaagaatcctaagaagtacttcacatttga 225
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0094K23, complete sequence
          Length = 167482

 Score =  202 bits (102), Expect = 9e-49
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                          
Query: 373    agttgttgatgggcacatcaaaaggcctcaggatgaagatattaagtctaacgtacttga 432
              |||||| ||||||||||||||||||||||||||||| |||||  ||||||| ||||||||
Sbjct: 101238 agttgtagatgggcacatcaaaaggcctcaggatgaggatatccagtctaatgtacttga 101297

                                                                          
Query: 433    gattgttggaacaaatgtgcagtcaacctacatcacttgcccagctgaccctgctgccac 492
               ||| |||||||||||||||| || || ||||| || ||||| ||||| |||||||| ||
Sbjct: 101298 aattattggaacaaatgtgcaatcgacttacattacctgcccggctgatcctgctgctac 101357

                                                                          
Query: 493    tcttggaattaagcttccatttcttgccctcatcgtgaagaatcttaaaaaatacttcac 552
              |||||||||||| ||||||||||||||  | ||||||||||||||||| || ||||||||
Sbjct: 101358 tcttggaattaaacttccatttcttgctttaatcgtgaagaatcttaagaagtacttcac 101417

                    
Query: 553    atttga 558
              ||||||
Sbjct: 101418 atttga 101423



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 289    aatgtttaagaacacattccagtccgggtttctatctattctctacagccttggg 343
              |||||| ||||| ||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 100458 aatgttcaagaatacatttcagtctgggtttctatcaattctttacagccttggg 100512



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 342    ggaccaagccgttgcagatatgggacaaggaag 374
              |||||||||| |||||||||||||| |||||||
Sbjct: 100602 ggaccaagcctttgcagatatgggataaggaag 100634
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  202 bits (102), Expect = 9e-49
 Identities = 165/186 (88%)
 Strand = Plus / Plus

                                                                            
Query: 373      agttgttgatgggcacatcaaaaggcctcaggatgaagatattaagtctaacgtacttga 432
                |||||| ||||||||||||||||||||||||||||| |||||  ||||||| ||||||||
Sbjct: 19505831 agttgtagatgggcacatcaaaaggcctcaggatgaggatatccagtctaatgtacttga 19505890

                                                                            
Query: 433      gattgttggaacaaatgtgcagtcaacctacatcacttgcccagctgaccctgctgccac 492
                 ||| |||||||||||||||| || || ||||| || ||||| ||||| |||||||| ||
Sbjct: 19505891 aattattggaacaaatgtgcaatcgacttacattacctgcccggctgatcctgctgctac 19505950

                                                                            
Query: 493      tcttggaattaagcttccatttcttgccctcatcgtgaagaatcttaaaaaatacttcac 552
                |||||||||||| ||||||||||||||  | ||||||||||||||||| || ||||||||
Sbjct: 19505951 tcttggaattaaacttccatttcttgctttaatcgtgaagaatcttaagaagtacttcac 19506010

                      
Query: 553      atttga 558
                ||||||
Sbjct: 19506011 atttga 19506016



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 289      aatgtttaagaacacattccagtccgggtttctatctattctctacagccttggg 343
                |||||| ||||| ||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 19505051 aatgttcaagaatacatttcagtctgggtttctatcaattctttacagccttggg 19505105



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 342      ggaccaagccgttgcagatatgggacaaggaag 374
                |||||||||| |||||||||||||| |||||||
Sbjct: 19505195 ggaccaagcctttgcagatatgggataaggaag 19505227
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>gb|AY111042.1| Zea mays CL5360_1 mRNA sequence
          Length = 972

 Score =  167 bits (84), Expect = 5e-38
 Identities = 171/200 (85%)
 Strand = Plus / Minus

                                                                       
Query: 290 atgtttaagaacacattccagtccgggtttctatctattctctacagccttgggaccaag 349
           ||||| ||||| ||||| ||||| ||||| || || ||||| || ||||| |||||||||
Sbjct: 846 atgttcaagaatacatttcagtctgggttcctgtccattctttatagcctcgggaccaag 787

                                                                       
Query: 350 ccgttgcagatatgggacaaggaagttgttgatgggcacatcaaaaggcctcaggatgaa 409
           || |||||||||||||| |||||||||||  |||||||||| ||| | || || ||||||
Sbjct: 786 ccattgcagatatgggataaggaagttgtgaatgggcacattaaacgaccccaagatgaa 727

                                                                       
Query: 410 gatattaagtctaacgtacttgagattgttggaacaaatgtgcagtcaacctacatcact 469
           |||||  | ||||| |||||||| ||||||||||||||||| |||||||| |||||||| 
Sbjct: 726 gatatccaatctaatgtacttgaaattgttggaacaaatgtacagtcaacttacatcaca 667

                               
Query: 470 tgcccagctgaccctgctgc 489
           ||||||||||| ||| ||||
Sbjct: 666 tgcccagctgatccttctgc 647
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>gb|AC152056.17| Glycine max clone gmp1-98f7, complete sequence
          Length = 122930

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 438   ttggaacaaatgtgcagtcaacctacatcacttgcccagctgaccctgctgccactcttg 497
             ||||| ||||| | ||||| || ||||| || |||||||||||||| ||||| || ||||
Sbjct: 46150 ttggatcaaatattcagtccacatacattacatgcccagctgacccagctgcaacacttg 46091

                             
Query: 498   gaattaagcttccatt 513
             | || || ||||||||
Sbjct: 46090 gtataaaacttccatt 46075



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 290  atgtttaagaacacattccagtccgggtttctatctattctctacagccttggg 343
            ||||| |||||||||||||| || || ||||| || ||| | ||||||||||||
Sbjct: 9361 atgttcaagaacacattccaatctggatttctttccattttgtacagccttggg 9308



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 296   aagaacacattccagtccgggtttctatctattctctacagccttggg 343
             |||||||||||||| || || ||||| || ||| | ||||||||||||
Sbjct: 49543 aagaacacattccaatctggatttctttccattttgtacagccttggg 49496



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 438   ttggaacaaatgtgcagtcaacctacatcacttgcccagctgaccctgctgc 489
             ||||| ||||| | ||||| || ||||| || |||||||||||||| |||||
Sbjct: 32707 ttggatcaaatattcagtccacatacattacctgcccagctgacccagctgc 32656



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 470  tgcccagctgaccctgctgccactcttggaattaagcttccatt 513
            |||||||||||||| ||||| || ||||| || || ||||||||
Sbjct: 5801 tgcccagctgacccagctgcaacacttggtataaaacttccatt 5758
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>ref|XM_970412.1| PREDICTED: Tribolium castaneum similar to transcription factor IIB
           (LOC664405), mRNA
          Length = 597

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 527 gtgaagaatcttaaaaaatacttcacatttgaagtccatatttt 570
           ||||| ||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 238 gtgaaaaatctcaaaaaatatttcacttttgaagtccaaatttt 281
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>gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence
          Length = 113397

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 438   ttggaacaaatgtgcagtcaacctacatcacttgcccagctgaccctgctgccactcttg 497
             ||||| ||||| | ||||| || ||||| || |||||||||||||| ||||| || ||||
Sbjct: 14379 ttggatcaaatattcagtccacatacattacatgcccagctgacccagctgcaacacttg 14320

                             
Query: 498   gaattaagcttccatt 513
             | || || ||||||||
Sbjct: 14319 gtataaaacttccatt 14304



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 296   aagaacacattccagtccgggtttctatctattctctacagccttggg 343
             |||||||||||||| || || ||||| || ||| | ||||||||||||
Sbjct: 17767 aagaacacattccaatctggatttctttccattttgtacagccttggg 17720
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>gb|AC149197.13| Medicago truncatula clone mth2-33p18, complete sequence
          Length = 115362

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                        
Query: 452  cagtcaacctacatcacttgcccagctgaccctgctgccactcttggaattaagcttcca 511
            ||||| || ||||| || ||||| |||||||| |||||||| ||||| || || ||||||
Sbjct: 7253 cagtccacatacattacgtgcccggctgacccagctgccacacttggtataaaacttcca 7312

                                                           
Query: 512  tttcttgccctcatcgtgaagaatcttaaaaaatacttcacatttga 558
            ||  | |   | || ||||||||||| || || ||||||||||||||
Sbjct: 7313 ttcttggttatgattgtgaagaatctaaagaagtacttcacatttga 7359



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 289  aatgtttaagaacacattccagtccgggtttct 321
            |||||| ||||||||||||||||| || |||||
Sbjct: 5309 aatgttcaagaacacattccagtctggatttct 5341
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>gb|AC148395.12| Medicago truncatula clone mth2-28d22, complete sequence
          Length = 116174

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                          
Query: 452    cagtcaacctacatcacttgcccagctgaccctgctgccactcttggaattaagcttcca 511
              ||||| || ||||| || ||||| |||||||| |||||||| ||||| || || ||||||
Sbjct: 108922 cagtccacatacattacgtgcccggctgacccagctgccacacttggtataaaacttcca 108863

                                                             
Query: 512    tttcttgccctcatcgtgaagaatcttaaaaaatacttcacatttga 558
              ||  | |   | || ||||||||||| || || ||||||||||||||
Sbjct: 108862 ttcttggttatgattgtgaagaatctaaagaagtacttcacatttga 108816



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 289    aatgtttaagaacacattccagtccgggtttct 321
              |||||| ||||||||||||||||| || |||||
Sbjct: 110866 aatgttcaagaacacattccagtctggatttct 110834
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>gb|AC119410.20| Medicago truncatula clone mth2-13n10, complete sequence
          Length = 108232

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 452  cagtcaacctacatcacttgcccagctgaccctgctgccactcttggaattaagcttcca 511
            ||||| || ||||| || ||||| |||||||| |||||||| ||||| || || ||||||
Sbjct: 2356 cagtccacatacattacgtgcccggctgacccagctgccacacttggtataaaacttcca 2297

                                                           
Query: 512  tttcttgccctcatcgtgaagaatcttaaaaaatacttcacatttga 558
            ||  | |   | || ||||||||||| || || ||||||||||||||
Sbjct: 2296 ttcttggttatgattgtgaagaatctaaagaagtacttcacatttga 2250



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 289  aatgtttaagaacacattccagtccgggtttct 321
            |||||| ||||||||||||||||| || |||||
Sbjct: 4300 aatgttcaagaacacattccagtctggatttct 4268
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>ref|NM_188094.1| Oryza sativa (japonica cultivar-group), Ozsa8526 predicted mRNA
          Length = 990

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  ccaccgccgcagccgtcgcctc 64
           ||||||||||||||||||||||
Sbjct: 243 ccaccgccgcagccgtcgcctc 264
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>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence
          Length = 160712

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 528  tgaagaatcttaaaaaatactt 549
            ||||||||||||||||||||||
Sbjct: 3720 tgaagaatcttaaaaaatactt 3699
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>gb|AC121901.2| Mus musculus BAC clone RP24-168D2 from 6, complete sequence
          Length = 140714

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 496   tggaattaagcttccatttctt 517
             ||||||||||||||||||||||
Sbjct: 66062 tggaattaagcttccatttctt 66083
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>gb|AC161602.4| Mus musculus BAC clone RP23-336I5 from chromosome 6, complete sequence
          Length = 224158

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 496   tggaattaagcttccatttctt 517
             ||||||||||||||||||||||
Sbjct: 27323 tggaattaagcttccatttctt 27344
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 43      ccaccgccgcagccgtcgcctc 64
               ||||||||||||||||||||||
Sbjct: 9690097 ccaccgccgcagccgtcgcctc 9690118
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>gb|AC008189.3|AC008189 Drosophila melanogaster, chromosome 3R, region 82C-82D, BAC clone
              BACR02C19, complete sequence
          Length = 188359

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 528    tgaagaatcttaaaaaatactt 549
              ||||||||||||||||||||||
Sbjct: 157668 tgaagaatcttaaaaaatactt 157647
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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 43     ccaccgccgcagccgtcgcctc 64
              ||||||||||||||||||||||
Sbjct: 128100 ccaccgccgcagccgtcgcctc 128121
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>dbj|AK071739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I11, full
           insert sequence
          Length = 1328

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 43  ccaccgccgcagccgtcgcctc 64
           ||||||||||||||||||||||
Sbjct: 355 ccaccgccgcagccgtcgcctc 376
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>gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 of 118 of the complete
              sequence
          Length = 273418

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 528    tgaagaatcttaaaaaatactt 549
              ||||||||||||||||||||||
Sbjct: 244569 tgaagaatcttaaaaaatactt 244548
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>ref|XM_592539.2| PREDICTED: Bos taurus similar to family with sequence similarity
           46, member A, transcript variant 1 (LOC540234), mRNA
          Length = 1617

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 212 gccgccgtccagctcgtcctcggcc 236
           ||||||| |||||||||||||||||
Sbjct: 180 gccgccggccagctcgtcctcggcc 156
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>ref|XM_872327.1| PREDICTED: Bos taurus similar to family with sequence similarity
           46, member A, transcript variant 2 (LOC540234), mRNA
          Length = 1211

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 212 gccgccgtccagctcgtcctcggcc 236
           ||||||| |||||||||||||||||
Sbjct: 322 gccgccggccagctcgtcctcggcc 298
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>emb|CR956374.5| Pig DNA sequence from clone CH242-153C17 on chromosome 17, complete
             sequence
          Length = 118034

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   acaagcttgggaaaataatgt 293
             |||||||||||||||||||||
Sbjct: 31930 acaagcttgggaaaataatgt 31950
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>ref|XM_310741.2| Anopheles gambiae str. PEST ENSANGP00000021947 (ENSANGG00000019458),
            partial mRNA
          Length = 6405

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 163  agctccttcgccagcaggtcg 183
            |||||||||||||||||||||
Sbjct: 6137 agctccttcgccagcaggtcg 6117
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    aagcttccatttcttgccct 522
              ||||||||||||||||||||
Sbjct: 506529 aagcttccatttcttgccct 506548
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     tgccgagctccttcgccagc 177
               ||||||||||||||||||||
Sbjct: 1473580 tgccgagctccttcgccagc 1473561
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>ref|XM_612696.2| PREDICTED: Bos taurus similar to F31D4.2 (LOC540698), mRNA
          Length = 2542

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 gcctccagcccgcctccgct 253
           ||||||||||||||||||||
Sbjct: 164 gcctccagcccgcctccgct 145
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>ref|XM_817380.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.5560)
           partial mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 307 ccagtccgggtttctatctattctctacagccttgg 342
           |||||| |||||||| || |||||||||||| ||||
Sbjct: 18  ccagtcggggtttctttccattctctacagcattgg 53
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>ref|XM_572397.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH02240) partial mRNA
          Length = 2356

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 503  aagcttccatttcttgccct 522
            ||||||||||||||||||||
Sbjct: 2268 aagcttccatttcttgccct 2249
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>ref|XM_799872.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053511849.30) partial mRNA
          Length = 1245

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 aacgtacttgagattgttgg 441
           ||||||||||||||||||||
Sbjct: 118 aacgtacttgagattgttgg 137
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>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence
          Length = 153106

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   acatttgaagtccatatttt 570
             ||||||||||||||||||||
Sbjct: 41525 acatttgaagtccatatttt 41544
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>gb|AC151742.9| Medicago truncatula clone mth2-83e4, complete sequence
          Length = 99595

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   ttgagattgttggaacaaat 448
             ||||||||||||||||||||
Sbjct: 69567 ttgagattgttggaacaaat 69548
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>gb|AC138451.15| Medicago truncatula clone mth2-24k1, complete sequence
          Length = 123909

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    ttgagattgttggaacaaat 448
              ||||||||||||||||||||
Sbjct: 119844 ttgagattgttggaacaaat 119825
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>gb|AC146909.23| Medicago truncatula clone mth2-57e16, complete sequence
          Length = 121218

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   ttgagattgttggaacaaat 448
             ||||||||||||||||||||
Sbjct: 74973 ttgagattgttggaacaaat 74954
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ccaccgccgcagccgtcgcc 62
             ||||||||||||||||||||
Sbjct: 26071 ccaccgccgcagccgtcgcc 26052
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>emb|AL606525.7| Mouse DNA sequence from clone RP23-235J20 on chromosome 13 Contains
             five novel genes and a CpG island, complete sequence
          Length = 187348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 328   tctctacagccttgggaccaagcc 351
             |||| |||||||||||||||||||
Sbjct: 67602 tctcaacagccttgggaccaagcc 67625
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>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   ttaaaaaatacttcacattt 556
             ||||||||||||||||||||
Sbjct: 94159 ttaaaaaatacttcacattt 94178
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>gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chromosome unknown, complete
              sequence
          Length = 175955

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 537    ttaaaaaatacttcacatttgaag 560
              ||||||||||||||| ||||||||
Sbjct: 127861 ttaaaaaatacttcatatttgaag 127884
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>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence
          Length = 198146

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 232    cggcctccagcccgcctccgctca 255
              |||||||||||||||| |||||||
Sbjct: 116624 cggcctccagcccgccgccgctca 116601
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>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    taagcttccatttcttgccc 521
              ||||||||||||||||||||
Sbjct: 138430 taagcttccatttcttgccc 138411
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>gb|AC092811.2| Homo sapiens chromosome 1 clone RP11-496N12, complete sequence
          Length = 192618

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   ttaaaaaatacttcacattt 556
             ||||||||||||||||||||
Sbjct: 16198 ttaaaaaatacttcacattt 16179
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    cgccgccggacccgtcctcc 204
              ||||||||||||||||||||
Sbjct: 833721 cgccgccggacccgtcctcc 833702
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>gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, complete sequence
          Length = 188858

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    taagcttccatttcttgccc 521
              ||||||||||||||||||||
Sbjct: 135601 taagcttccatttcttgccc 135620
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 43       ccaccgccgcagccgtcgcc 62
                ||||||||||||||||||||
Sbjct: 25539874 ccaccgccgcagccgtcgcc 25539855
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 43       ccaccgccgcagccgtcgcc 62
                ||||||||||||||||||||
Sbjct: 12458963 ccaccgccgcagccgtcgcc 12458982
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>emb|BX247864.10| Zebrafish DNA sequence from clone CH211-225P16, complete sequence
          Length = 208758

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   tcacatttgaagtccatatt 568
             ||||||||||||||||||||
Sbjct: 26989 tcacatttgaagtccatatt 27008
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>gb|AC154468.2| Mus musculus BAC clone RP24-157D1 from chromosome 16, complete sequence
          Length = 158990

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ttacaagcttgggaaaataa 290
             ||||||||||||||||||||
Sbjct: 67543 ttacaagcttgggaaaataa 67562
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>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
              sequence
          Length = 176639

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    acatttgaagtccatatttt 570
              ||||||||||||||||||||
Sbjct: 162687 acatttgaagtccatatttt 162668
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>gb|AC025157.18| Homo sapiens 12 BAC RP11-401I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 143417

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 529   gaagaatcttaaaaaatact 548
             ||||||||||||||||||||
Sbjct: 52647 gaagaatcttaaaaaatact 52666
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ccgccgtccagctcgtcctc 232
              ||||||||||||||||||||
Sbjct: 441176 ccgccgtccagctcgtcctc 441195
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>gb|AC113174.3| Homo sapiens chromosome 1 clone RP11-397A15, complete sequence
          Length = 175470

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   cttgcccagctgaccctgct 487
             ||||||||||||||||||||
Sbjct: 72646 cttgcccagctgaccctgct 72627
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>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0421H01
          Length = 142638

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ccaccgccgcagccgtcgcc 62
             ||||||||||||||||||||
Sbjct: 32697 ccaccgccgcagccgtcgcc 32716
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>ref|XM_309752.2| Anopheles gambiae str. PEST ENSANGP00000012577 (ENSANGG00000010088),
            partial mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   ccaccgccgcagccgtcgcc 62
            ||||||||||||||||||||
Sbjct: 992  ccaccgccgcagccgtcgcc 1011
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>gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2, complete sequence
          Length = 174149

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   ttgggaaaataatgtttaag 298
             ||||||||||||||||||||
Sbjct: 18405 ttgggaaaataatgtttaag 18424
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>ref|NM_211789.1| Eremothecium gossypii AGR062Cp (AGR062C), mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 cgccgccggacccgtcctcc 204
           ||||||||||||||||||||
Sbjct: 652 cgccgccggacccgtcctcc 671
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 172    gccagcaggtcgacgccgccggac 195
              ||||||||| ||||||||||||||
Sbjct: 181654 gccagcaggccgacgccgccggac 181631
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>emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in linkage group 20,
              complete sequence
          Length = 183151

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 537    ttaaaaaatacttcacattt 556
              ||||||||||||||||||||
Sbjct: 120376 ttaaaaaatacttcacattt 120395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,166,206
Number of Sequences: 3902068
Number of extensions: 5166206
Number of successful extensions: 103523
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103007
Number of HSP's gapped (non-prelim): 516
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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