>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
 Frame = -2

Query: 417 TMEGALPLRANCLTWGCPVLPTH-PTMALEPTMRPSLEKAIPTHPELYIAESTT-----R 256
           T +  +P     +    P +PT  PT+A EP   P+ E  + T       E TT     R
Sbjct: 407 TEKPTVPTEETSIPTEPPTVPTEKPTVATEPPTVPTEEPTVATEKPTVPTEETTPPTTAR 466

Query: 255 STLS---PPCAYRSTKLFQTGLQASPE*LPTSSGGSASSQLPVCA 130
           STL+   P     ST L  T L  +    PT+    A++    CA
Sbjct: 467 STLTSLEPTTHTPSTSLTSTTLSTTTTPSPTTVSCPANAHYESCA 511

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -1

Query: 367 PRLADPPNHGARAHHEAVLGEGHPHPPGAVHRREHHPQH 251
           P   +  +H    HHE    E H H P   H   HHP H
Sbjct: 72  PHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPH 110

>UNG_LACAC (Q5FL46) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 232

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
 Frame = +2

Query: 158 LPPELVGNYSGL----ACSPVWNNFVLRYAQGGDNVLRVVLSAMYS-------SGWVGM- 301
           LPP L   Y  L       PV + ++ ++A  G  +L  VL+  Y         GW  + 
Sbjct: 87  LPPSLRNIYKELYDDVGAIPVNHGYLKKWADQGVLLLNAVLTVPYGHANGHQGKGWEDVT 146

Query: 302 -----AFSKDGLMVGSSAMVGWVGKTGQPHV------KQFALNGKAPSMVVADRGFLVSN 448
                A SK G +V     + W G+  Q  +      K F +    PS   ADRGF  S 
Sbjct: 147 DAAIKALSKRGKVV----FILW-GRFAQNKIPLIDQSKNFIIKSSHPSPFSADRGFFGSR 201

Query: 449 --NRDHTVLVKQAKIYLAFQL 505
             +R +T L+   +  + +QL
Sbjct: 202 PFSRCNTALINFGETPIDWQL 222

>RIBD_CHLMU (Q9PLJ6) Riboflavin biosynthesis protein ribD [Includes:|
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (EC 3.5.4.26) (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
           1.1.1.193) (HTP reductase)]
          Length = 371

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 290 WVGMAFSKDGLMVGSSAMVGWVGKTGQPHVKQFALNGKAPSMVVAD 427
           WVG    K+G ++G     GW    G PH +  A   +  S+V AD
Sbjct: 31  WVGCVIVKNGCIIGR----GWHKGIGSPHAEVCAFQDQTSSLVGAD 72

>CD008_MOUSE (Q8CGI1) Protein C4orf008 homolog (Fragment)|
          Length = 944

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
 Frame = -2

Query: 432 PLSATTMEGALPLRANCLTWGCPVLPTHPTMALEPTMR--------PSLEKAIPTHPELY 277
           P SA T  GALP     L+   P  PTHP + L P +         P L + +  HP LY
Sbjct: 423 PASAMTA-GALPPGHQFLS---PEKPTHPALHLYPHIHGHVPLHTVPHLPRPL-IHPTLY 477

Query: 276 IAESTTRSTLSPPCAYRS 223
            A   T S   PP   +S
Sbjct: 478 PAPPFTHSKALPPAPVQS 495

>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1470

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 29/103 (28%), Positives = 41/103 (39%)
 Frame = -1

Query: 430 PVGDDHGGRLAVEGELLDVGLPRLADPPNHGARAHHEAVLGEGHPHPPGAVHRREHHPQH 251
           P G    G   + GE    GLP +  PP  G R H  +    G   PPGAV  +      
Sbjct: 644 PPGSGEKGDRGIAGEQGPQGLPGVPGPP--GLRGHSGS---PGPQGPPGAVGPQGLRGDV 698

Query: 250 VVPALRVPEHEVIPDGAAGQPGVVADELGRQRVVAAAGLRRHP 122
            +P ++  +  + P G  G  G    E G + +    G+R  P
Sbjct: 699 GLPGVKGDKGLMGPPGPKGDQG----EKGPRGLTGEPGIRGLP 737

>ATG15_ASPFU (Q4X180) Putative lipase atg15 (EC 3.1.1.3) (Autophagy-related|
           protein 15)
          Length = 650

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +3

Query: 171 SSATTPGWPAAPSGITSCSGTRRAGTTCCGWCSRRCTAPGGWGWPSPRTASWWARAP 341
           S+  TPGW       T+ + T    TT     +  C  PG +G   P T +    AP
Sbjct: 488 STCKTPGWWGCLDESTTTTTTTSTTTTTTTTTTSTCKTPGWFGCKDPTTTTEATAAP 544

>BSH_CHICK (Q6RFL5) Brain-specific homeobox protein homolog|
          Length = 233

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = -1

Query: 409 GRLAVEGELLDVGLPRLADPPNHGARAHHEAVLGEGHPHPPGAVHRREHHPQH 251
           G LA    LLD G P +  P            L   HPHP  A+H+ EHH  H
Sbjct: 43  GSLASRVPLLDYGYPLMPAP-----------ALLAPHPHP--ALHKPEHHHHH 82

>TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-associated|
            protein 1) (Telomerase protein 1) (p240) (p80 homolog)
          Length = 2629

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
 Frame = +2

Query: 290  WV-GMAFSKDGLMVGSSA--MVG-WVGKTGQPHVKQFALNGKAPSMVVADRGFLVSNNRD 457
            W+ G A++KD ++V  S+   VG W  + GQ  + QF+ +  A S VVA    +VS +RD
Sbjct: 2117 WITGCAWTKDNILVSCSSDGSVGLWNPEAGQ-QLGQFSGHQSAVSAVVAVEEHIVSVSRD 2175

Query: 458  HTVLV 472
             T+ V
Sbjct: 2176 GTLKV 2180

>SYI_LACJO (Q74JX6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 928

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
 Frame = +2

Query: 263 VLSAMYSSG--WVGMAFSKDGL-------MVGSSAMVGWVGKTGQPHVKQFALNGKAPSM 415
           +L   + SG  W G+   +DGL       + GS    GW   +    +   A+ GKAP  
Sbjct: 524 ILDVWFDSGSSWAGVMQERDGLGFPADLYLEGSDQYRGWFNSS---LITSVAVTGKAPYK 580

Query: 416 VVADRGFLVSN 448
            V  +GF++ +
Sbjct: 581 QVLSQGFVLDD 591

>REGB_PSEAE (Q03381) Protein regB|
          Length = 75

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = +3

Query: 177 ATTPGWPAAPSGIT--SCSGT-RRAGTTCC-----GWCSRRCTAPGGWGWPSPRT 317
           A TPGWPA P G T     G  RR+  T         CSR  +A   +GW +  T
Sbjct: 5   AVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATAT 59

>TLL_DROVI (O16845) Protein tailless|
          Length = 450

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
 Frame = -1

Query: 373 GLPRLADPPNHGARAHHEAVLGEGHPHPPGA------VHRREHHPQH 251
           G P L  P     R+HH A L      PP A      V R  HHP H
Sbjct: 150 GFPGLPMPMPGVQRSHHHAALSAAFQPPPSAAVLDLSVPRVPHHPVH 196

>YD14_SCHPO (Q10237) Hypothetical protein C4G9.04c in chromosome I|
          Length = 638

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 22/91 (24%), Positives = 41/91 (45%)
 Frame = -2

Query: 459 WSRLLETRNPLSATTMEGALPLRANCLTWGCPVLPTHPTMALEPTMRPSLEKAIPTHPEL 280
           + +LL  +N L A   + A P  ++  T    V     +++  P M+PS+   IPT P  
Sbjct: 252 YDQLLAIKNQL-AQLEKPASPSTSSVATSAPSVPSALSSISSTPFMKPSIPSTIPTIPSA 310

Query: 279 YIAESTTRSTLSPPCAYRSTKLFQTGLQASP 187
           Y A  +++  L+    +   +  +  L + P
Sbjct: 311 YSASVSSQPPLTHSYVHPGPQSHKYSLSSGP 341

>LUXR_VIBFI (P12746) Transcriptional activator protein luxR|
          Length = 250

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -2

Query: 549 KAKSTCCCLSCESNLSWKAR*ILACLTRTVWSRLLETRNPLSAT 418
           K +  C   +CE   SW    IL C  RTV   L   +  L+ T
Sbjct: 185 KREKECLAWACEGKSSWDISKILGCSERTVTFHLTNAQMKLNTT 228

>SYI_LACAC (Q5FKU5) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 927

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
 Frame = +2

Query: 263 VLSAMYSSG--WVGMAFSKDGL-------MVGSSAMVGWVGKTGQPHVKQFALNGKAPSM 415
           +L   + SG  W G+   +DGL       + GS    GW   +    +   A+ GKAP  
Sbjct: 523 ILDVWFDSGSSWSGVMEKRDGLHYPADLYLEGSDQYRGWFNSS---LITSVAVTGKAPYK 579

Query: 416 VVADRGFLVSN 448
            V  +GF++ +
Sbjct: 580 EVLSQGFVLDD 590

>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 616

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = -2

Query: 318 PSLEKAIPTHPELYIAESTTRSTLSPPCAYRSTKLFQTGLQASPE*LPTSSGGSASSQLP 139
           P+   A  + P+     S   ST+S   AY ++K F  G  A P  L  +SGG+ S  +P
Sbjct: 132 PAASPAASSRPQPQNGTSGAGSTVSK--AYGASKTF--GKAAGPS-LSHNSGGTQSKVVP 186

Query: 138 VCAVTP 121
           + ++TP
Sbjct: 187 IASLTP 192

>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (Single-stranded
           DNA-binding protein) (p70)
          Length = 616

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = -2

Query: 318 PSLEKAIPTHPELYIAESTTRSTLSPPCAYRSTKLFQTGLQASPE*LPTSSGGSASSQLP 139
           P+   A  + P+     S   ST+S   AY ++K F  G  A P  L  +SGG+ S  +P
Sbjct: 132 PAASPAASSRPQPQNGSSGMGSTVSK--AYGASKTF--GKAAGPS-LSHTSGGTQSKVVP 186

Query: 138 VCAVTP 121
           + ++TP
Sbjct: 187 IASLTP 192

>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 27/101 (26%), Positives = 40/101 (39%)
 Frame = -1

Query: 424 GDDHGGRLAVEGELLDVGLPRLADPPNHGARAHHEAVLGEGHPHPPGAVHRREHHPQHVV 245
           G+ HG R  V   + +  +PRLA  P+ G +       GE  P P     R         
Sbjct: 35  GERHGRRKVVVAAISEE-VPRLAASPSSGIKG---GGAGERRPAPEKVALR-------AA 83

Query: 244 PALRVPEHEVIPDGAAGQPGVVADELGRQRVVAAAGLRRHP 122
             +R  + E I +  AG    + D +GR  V+     + HP
Sbjct: 84  LTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHP 124

>XYL2_PICST (P22144) D-xylulose reductase (EC 1.1.1.9) (Xylitol dehydrogenase)|
           (XDH)
          Length = 363

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -1

Query: 307 EGHPHPPGAVHRREHHPQHVVPALRVPEHEVIPDGAAGQP---GVVADELG 164
           EG P+PPG + +    P+  +  +++P+H  +  GA  +P   GV A +LG
Sbjct: 123 EGEPNPPGTLCKYFKSPEDFL--VKLPDHVSLELGALVEPLSVGVHASKLG 171

>ILVD_MYCLE (O06069) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 564

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = -1

Query: 418 DH-GGRLAVEGELLDVGLPRLADPPNHGARAHHEAVLGEGHPHPPGAVHRREHHPQHVVP 242
           DH GG   V   LLD GL    D      +   E +     P P G V R  H+P H   
Sbjct: 327 DHIGGVPVVMKALLDAGLLH-GDCLTVTGQTMAENLASIAPPDPDGQVIRTLHNPIHPTG 385

Query: 241 ALRVPEHEVIPDGA 200
            + +    + PDGA
Sbjct: 386 GITILRGSLAPDGA 399

>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 817

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 204 PSGITSCSGTRRAGTTCCGWCSRRCTAPGGWGWPSP 311
           P G +   G R     CCG CS R  A   WG P P
Sbjct: 31  PDGRSRRGGGRSFWARCCGCCSCRNAADDDWG-PEP 65

>SQT1_CAEEL (P12114) Cuticle collagen sqt-1 (Protein squat-1) (Protein|
           roller-5)
          Length = 324

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = -1

Query: 373 GLPRLADPPNHGARAHHEAVLGE-GHPHPPGAVHRREHHPQHVVPALRVPEHEVIPDGAA 197
           G P     P H         +G+ G P PPG   R   HP    P  + P  +  P G A
Sbjct: 196 GNPGRDGQPGHPGEQGSSGQIGKIGEPGPPGEKGRDAEHPIG-GPGPKGPRGDQGPTGPA 254

Query: 196 GQPGV 182
           GQ G+
Sbjct: 255 GQNGL 259

>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 617

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 243 GTTCCGWCSRRCT-APGGWGWPSPRTASWW 329
           G +  GW + R   + GGWG  + +T+SWW
Sbjct: 588 GGSTGGWGNDRAGGSAGGWGASNTKTSSWW 617

>PACC_USTMA (Q6H8R9) pH-response transcription factor pacC/RIM101|
          Length = 791

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = -2

Query: 423 ATTMEGALP----LRANCLTWGCPVLPTHPTMALEPTMRPSLEKAIPTHPELYIAESTTR 256
           AT   GA P    L A     G P LPT   +    +  PS   ++P   + + A ST  
Sbjct: 181 ATAFGGAYPYPPQLHAANAYLGYPQLPTQHGLYPSASTYPSAYPSLPPTSDYHYAHSTPS 240

Query: 255 STLSP 241
           ++LSP
Sbjct: 241 ASLSP 245

>K1043_MOUSE (Q80XJ3) TPR repeat-containing protein KIAA1043|
          Length = 1691

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +1

Query: 316  RPHGGLERHGWVGRQD-----GAAPRQAVRPQRQGALHGRR 423
            +P GGLE  G  GRQD        P++A  P+RQ +   RR
Sbjct: 1242 KPEGGLEGGGPRGRQDYDRSKSTHPQRATLPRRQTSPQARR 1282

>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein|
            kinase with no lysine 2) (Protein kinase,
            lysine-deficient 2)
          Length = 2297

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
 Frame = -2

Query: 366  PVLPTHPTMALEPT-MRPSL-EKAIPT----------HPELYIAESTTR--STLSPPCAY 229
            PVLP  P + + P  ++P L E+A P           HP  Y  +   +  +   PP A 
Sbjct: 990  PVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAV 1049

Query: 228  RSTKLFQTGLQASPE*LPTSSGGSASSQLPVCAV 127
             S  L +  L A+PE LP      A+    V +V
Sbjct: 1050 LSPPLPEVLLPAAPELLPQFPSSLATVSASVQSV 1083


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,316,272
Number of Sequences: 219361
Number of extensions: 1378582
Number of successful extensions: 6327
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)