ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29d09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192048.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 408 bits (206), Expect = e-111 Identities = 389/450 (86%) Strand = Plus / Plus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 72 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 131 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccggtacgcgcagggcgggga 246 ||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 132 cgggctggcctgccgcccggtctggaacaacttcgtcctccggtacgcgcaggggaagga 191 Query: 247 caacgtgctgcgggtggtgctctcggcgatgtacagctccgggtgggtggggatggcctt 306 ||||||||||||||||||| ||||| ||||||||||| | |||||||||||||||| || Sbjct: 192 caacgtgctgcgggtggtgatctcgtcgatgtacagcacggggtgggtggggatggggtt 251 Query: 307 ctccaaggacggcctcatggtgggctcgagcgccatggttgggtgggtcggcaagacggg 366 |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 252 ctccaaggacgggatgatggtgggatcgagcgccatggttgggtgggtcggcaagacggg 311 Query: 367 gcagccccacgtcaagcagttcgccctcaacggcaaggcgccctccatggtcgtcgccga 426 || | ||||||||||||||||| |||| ||| ||| |||| || ||| |||||||| Sbjct: 312 gctgtcccacgtcaagcagttcagcctccgcgggaagacgccgtcgcaggtggtcgccga 371 Query: 427 caggggattcctcgtctccaacaaccgcgaccacaccgtcctcgtcaagcaggccaagat 486 | ||| |||||| ||||| ||| ||||||||||||| | || ||||||||||||| Sbjct: 372 cgagggcttcctccagtccaaggaccacgaccacaccgtcgtggtgcagcaggccaagat 431 Query: 487 ctacctcgccttccagctcaagttcgactcgcagctcaagcagcagcaggtgctcttcgc 546 |||||||||||||||||||| |||| | |||| ||||| || ||||||||||||| |||| Sbjct: 432 ctacctcgccttccagctcaggttccagtcgccgctcaggcggcagcaggtgctcctcgc 491 Query: 547 cttcggctctgccatccctgtcaacgaccg 576 ||||||| |||||||| ||||||||||| Sbjct: 492 cttcggcaacgccatccccgtcaacgaccg 521
>dbj|AK060690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C01, full insert sequence Length = 1594 Score = 408 bits (206), Expect = e-111 Identities = 389/450 (86%) Strand = Plus / Plus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 281 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 340 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccggtacgcgcagggcgggga 246 ||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 341 cgggctggcctgccgcccggtctggaacaacttcgtcctccggtacgcgcaggggaagga 400 Query: 247 caacgtgctgcgggtggtgctctcggcgatgtacagctccgggtgggtggggatggcctt 306 ||||||||||||||||||| ||||| ||||||||||| | |||||||||||||||| || Sbjct: 401 caacgtgctgcgggtggtgatctcgtcgatgtacagcacggggtgggtggggatggggtt 460 Query: 307 ctccaaggacggcctcatggtgggctcgagcgccatggttgggtgggtcggcaagacggg 366 |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 461 ctccaaggacgggatgatggtgggatcgagcgccatggttgggtgggtcggcaagacggg 520 Query: 367 gcagccccacgtcaagcagttcgccctcaacggcaaggcgccctccatggtcgtcgccga 426 || | ||||||||||||||||| |||| ||| ||| |||| || ||| |||||||| Sbjct: 521 gctgtcccacgtcaagcagttcagcctccgcgggaagacgccgtcgcaggtggtcgccga 580 Query: 427 caggggattcctcgtctccaacaaccgcgaccacaccgtcctcgtcaagcaggccaagat 486 | ||| |||||| ||||| ||| ||||||||||||| | || ||||||||||||| Sbjct: 581 cgagggcttcctccagtccaaggaccacgaccacaccgtcgtggtgcagcaggccaagat 640 Query: 487 ctacctcgccttccagctcaagttcgactcgcagctcaagcagcagcaggtgctcttcgc 546 |||||||||||||||||||| |||| | |||| ||||| || ||||||||||||| |||| Sbjct: 641 ctacctcgccttccagctcaggttccagtcgccgctcaggcggcagcaggtgctcctcgc 700 Query: 547 cttcggctctgccatccctgtcaacgaccg 576 ||||||| |||||||| ||||||||||| Sbjct: 701 cttcggcaacgccatccccgtcaacgaccg 730
>dbj|AK069379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H09, full insert sequence Length = 1419 Score = 313 bits (158), Expect = 4e-82 Identities = 236/262 (90%) Strand = Plus / Plus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 171 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 230 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccggtacgcgcagggcgggga 246 ||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 231 cgggctggcctgccgcccggtctggaacaacttcgtcctccggtacgcgcaggggaagga 290 Query: 247 caacgtgctgcgggtggtgctctcggcgatgtacagctccgggtgggtggggatggcctt 306 ||||||||||||||||||| ||||| ||||||||||| | |||||||||||||||| || Sbjct: 291 caacgtgctgcgggtggtgatctcgtcgatgtacagcacggggtgggtggggatggggtt 350 Query: 307 ctccaaggacggcctcatggtgggctcgagcgccatggttgggtgggtcggcaagacggg 366 |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 351 ctccaaggacgggatgatggtgggatcgagcgccatggttgggtgggtcggcaagacggg 410 Query: 367 gcagccccacgtcaagcagttc 388 || | ||||||||||||||||| Sbjct: 411 gctgtcccacgtcaagcagttc 432
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 293 bits (148), Expect = 3e-76 Identities = 298/348 (85%) Strand = Plus / Minus Query: 229 gtacgcgcagggcggggacaacgtgctgcgggtggtgctctcggcgatgtacagctccgg 288 |||||||||||| |||||||||||||||||||||| ||||| ||||||||||| | || Sbjct: 28024464 gtacgcgcaggggaaggacaacgtgctgcgggtggtgatctcgtcgatgtacagcacggg 28024405 Query: 289 gtgggtggggatggccttctccaaggacggcctcatggtgggctcgagcgccatggttgg 348 |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 28024404 gtgggtggggatggggttctccaaggacgggatgatggtgggatcgagcgccatggttgg 28024345 Query: 349 gtgggtcggcaagacggggcagccccacgtcaagcagttcgccctcaacggcaaggcgcc 408 |||||||||||||||||||| | ||||||||||||||||| |||| ||| ||| |||| Sbjct: 28024344 gtgggtcggcaagacggggctgtcccacgtcaagcagttcagcctccgcgggaagacgcc 28024285 Query: 409 ctccatggtcgtcgccgacaggggattcctcgtctccaacaaccgcgaccacaccgtcct 468 || ||| ||||||||| ||| |||||| ||||| ||| ||||||||||||| | Sbjct: 28024284 gtcgcaggtggtcgccgacgagggcttcctccagtccaaggaccacgaccacaccgtcgt 28024225 Query: 469 cgtcaagcaggccaagatctacctcgccttccagctcaagttcgactcgcagctcaagca 528 || ||||||||||||||||||||||||||||||||| |||| | |||| ||||| || Sbjct: 28024224 ggtgcagcaggccaagatctacctcgccttccagctcaggttccagtcgccgctcaggcg 28024165 Query: 529 gcagcaggtgctcttcgccttcggctctgccatccctgtcaacgaccg 576 ||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 28024164 gcagcaggtgctcctcgccttcggcaacgccatccccgtcaacgaccg 28024117 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 28024665 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 28024606 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccgg 229 ||||||||||||| |||| |||||||| |||||||| |||||| Sbjct: 28024605 cgggctggcctgccgcccggtctggaacaacttcgtcctccgg 28024563
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 293 bits (148), Expect = 3e-76 Identities = 298/348 (85%) Strand = Plus / Minus Query: 229 gtacgcgcagggcggggacaacgtgctgcgggtggtgctctcggcgatgtacagctccgg 288 |||||||||||| |||||||||||||||||||||| ||||| ||||||||||| | || Sbjct: 39663 gtacgcgcaggggaaggacaacgtgctgcgggtggtgatctcgtcgatgtacagcacggg 39604 Query: 289 gtgggtggggatggccttctccaaggacggcctcatggtgggctcgagcgccatggttgg 348 |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 39603 gtgggtggggatggggttctccaaggacgggatgatggtgggatcgagcgccatggttgg 39544 Query: 349 gtgggtcggcaagacggggcagccccacgtcaagcagttcgccctcaacggcaaggcgcc 408 |||||||||||||||||||| | ||||||||||||||||| |||| ||| ||| |||| Sbjct: 39543 gtgggtcggcaagacggggctgtcccacgtcaagcagttcagcctccgcgggaagacgcc 39484 Query: 409 ctccatggtcgtcgccgacaggggattcctcgtctccaacaaccgcgaccacaccgtcct 468 || ||| ||||||||| ||| |||||| ||||| ||| ||||||||||||| | Sbjct: 39483 gtcgcaggtggtcgccgacgagggcttcctccagtccaaggaccacgaccacaccgtcgt 39424 Query: 469 cgtcaagcaggccaagatctacctcgccttccagctcaagttcgactcgcagctcaagca 528 || ||||||||||||||||||||||||||||||||| |||| | |||| ||||| || Sbjct: 39423 ggtgcagcaggccaagatctacctcgccttccagctcaggttccagtcgccgctcaggcg 39364 Query: 529 gcagcaggtgctcttcgccttcggctctgccatccctgtcaacgaccg 576 ||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 39363 gcagcaggtgctcctcgccttcggcaacgccatccccgtcaacgaccg 39316 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 39864 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 39805 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccgg 229 ||||||||||||| |||| |||||||| |||||||| |||||| Sbjct: 39804 cgggctggcctgccgcccggtctggaacaacttcgtcctccgg 39762
>dbj|AK119489.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-C11, full insert sequence Length = 1309 Score = 293 bits (148), Expect = 3e-76 Identities = 298/348 (85%) Strand = Plus / Minus Query: 229 gtacgcgcagggcggggacaacgtgctgcgggtggtgctctcggcgatgtacagctccgg 288 |||||||||||| |||||||||||||||||||||| ||||| ||||||||||| | || Sbjct: 483 gtacgcgcaggggaaggacaacgtgctgcgggtggtgatctcgtcgatgtacagcacggg 424 Query: 289 gtgggtggggatggccttctccaaggacggcctcatggtgggctcgagcgccatggttgg 348 |||||||||||||| |||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 423 gtgggtggggatggggttctccaaggacgggatgatggtgggatcgagcgccatggttgg 364 Query: 349 gtgggtcggcaagacggggcagccccacgtcaagcagttcgccctcaacggcaaggcgcc 408 |||||||||||||||||||| | ||||||||||||||||| |||| ||| ||| |||| Sbjct: 363 gtgggtcggcaagacggggctgtcccacgtcaagcagttcagcctccgcgggaagacgcc 304 Query: 409 ctccatggtcgtcgccgacaggggattcctcgtctccaacaaccgcgaccacaccgtcct 468 || ||| ||||||||| ||| |||||| ||||| ||| ||||||||||||| | Sbjct: 303 gtcgcaggtggtcgccgacgagggcttcctccagtccaaggaccacgaccacaccgtcgt 244 Query: 469 cgtcaagcaggccaagatctacctcgccttccagctcaagttcgactcgcagctcaagca 528 || ||||||||||||||||||||||||||||||||| |||| | |||| ||||| || Sbjct: 243 ggtgcagcaggccaagatctacctcgccttccagctcaggttccagtcgccgctcaggcg 184 Query: 529 gcagcaggtgctcttcgccttcggctctgccatccctgtcaacgaccg 576 ||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 183 gcagcaggtgctcctcgccttcggcaacgccatccccgtcaacgaccg 136 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 127 gacggcgcagaccggcagctgcgacgacgcgctgccgcccgagctcgtcggcaactactc 186 |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||| Sbjct: 684 gacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactc 625 Query: 187 cgggctggcctgcagccccgtctggaataacttcgtgctccgg 229 ||||||||||||| |||| |||||||| |||||||| |||||| Sbjct: 624 cgggctggcctgccgcccggtctggaacaacttcgtcctccgg 582
>ref|XM_475892.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 155 bits (78), Expect = 2e-34 Identities = 281/349 (80%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 169 gctcgtcggcaactactccgggctggcctgcagccccgtctggaataacttcgtgctccg 228 ||||||||||||||||||||| ||| ||| || |||||||| || ||||||||||| Sbjct: 99 gctcgtcggcaactactccggcctgaattgccagccggtctggaacaatttcgtgctccg 158 Query: 229 gtacgcgcagggcggggacaacgtgctgcgggtggtgctctcggcgatgtacagctccgg 288 ||| || | | | ||||||||||| |||||||||| ||| ||||||||||| | || Sbjct: 159 gtatcaccaagacaagaacaacgtgctgagggtggtgctgtcgacgatgtacagcacggg 218 Query: 289 gtgggtggggatggccttctccaaggacggcctcatggtgggctcgagcgccatggttgg 348 |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || Sbjct: 219 gtgggtggggatggggttctcccgggacggcctcatggtgggctcgagcgccatggtcgg 278 Query: 349 gtgggtcggcaagacggggcagccccacgtcaagcagttcgccctcaacggcaaggcgcc 408 |||| |||| || ||| | || ||||||||||||||||| || ||||||| || Sbjct: 279 gtggatcgggcggaagggcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgag 338 Query: 409 ctccatggtcgtcgccgacaggggattcctcgtctcca------acaaccgcgaccacac 462 | || ||| |||| | || | || ||||||||||||| |||||| ||||||||| Sbjct: 339 cggcaaggtggtcgtcaaccgcggcttcctcgtctccaactccaacaaccacgaccacac 398 Query: 463 cgtcctcgtcaagcaggccaagatctacctcgccttccagctcaagttc 511 |||| | || ||||||||| |||||||||||| ||||||||| ||||| Sbjct: 399 cgtcgtggtgcagcaggccaggatctacctcgcgttccagctccagttc 447
>dbj|AK058980.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D11, full insert sequence Length = 1462 Score = 155 bits (78), Expect = 2e-34 Identities = 281/349 (80%), Gaps = 6/349 (1%) Strand = Plus / Plus Query: 169 gctcgtcggcaactactccgggctggcctgcagccccgtctggaataacttcgtgctccg 228 ||||||||||||||||||||| ||| ||| || |||||||| || ||||||||||| Sbjct: 238 gctcgtcggcaactactccggcctgaattgccagccggtctggaacaatttcgtgctccg 297 Query: 229 gtacgcgcagggcggggacaacgtgctgcgggtggtgctctcggcgatgtacagctccgg 288 ||| || | | | ||||||||||| |||||||||| ||| ||||||||||| | || Sbjct: 298 gtatcaccaagacaagaacaacgtgctgagggtggtgctgtcgacgatgtacagcacggg 357 Query: 289 gtgggtggggatggccttctccaaggacggcctcatggtgggctcgagcgccatggttgg 348 |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || Sbjct: 358 gtgggtggggatggggttctcccgggacggcctcatggtgggctcgagcgccatggtcgg 417 Query: 349 gtgggtcggcaagacggggcagccccacgtcaagcagttcgccctcaacggcaaggcgcc 408 |||| |||| || ||| | || ||||||||||||||||| || ||||||| || Sbjct: 418 gtggatcgggcggaagggcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgag 477 Query: 409 ctccatggtcgtcgccgacaggggattcctcgtctcca------acaaccgcgaccacac 462 | || ||| |||| | || | || ||||||||||||| |||||| ||||||||| Sbjct: 478 cggcaaggtggtcgtcaaccgcggcttcctcgtctccaactccaacaaccacgaccacac 537 Query: 463 cgtcctcgtcaagcaggccaagatctacctcgccttccagctcaagttc 511 |||| | || ||||||||| |||||||||||| ||||||||| ||||| Sbjct: 538 cgtcgtggtgcagcaggccaggatctacctcgcgttccagctccagttc 586
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 153 bits (77), Expect = 8e-34 Identities = 223/272 (81%), Gaps = 6/272 (2%) Strand = Plus / Plus Query: 246 acaacgtgctgcgggtggtgctctcggcgatgtacagctccgggtgggtggggatggcct 305 ||||||||||| |||||||||| ||| ||||||||||| | |||||||||||||||| | Sbjct: 42882 acaacgtgctgagggtggtgctgtcgacgatgtacagcacggggtgggtggggatggggt 42941 Query: 306 tctccaaggacggcctcatggtgggctcgagcgccatggttgggtgggtcggcaagacgg 365 ||||| ||||||||||||||||||||||||||||||||| |||||| |||| || || Sbjct: 42942 tctcccgggacggcctcatggtgggctcgagcgccatggtcgggtggatcgggcggaagg 43001 Query: 366 ggcagccccacgtcaagcagttcgccctcaacggcaaggcgccctccatggtcgtcgccg 425 | | || ||||||||||||||||| || ||||||| || | || ||| |||| | Sbjct: 43002 gcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgagcggcaaggtggtcgtca 43061 Query: 426 acaggggattcctcgtctcca------acaaccgcgaccacaccgtcctcgtcaagcagg 479 || | || ||||||||||||| |||||| ||||||||||||| | || |||||| Sbjct: 43062 accgcggcttcctcgtctccaactccaacaaccacgaccacaccgtcgtggtgcagcagg 43121 Query: 480 ccaagatctacctcgccttccagctcaagttc 511 ||| |||||||||||| ||||||||| ||||| Sbjct: 43122 ccaggatctacctcgcgttccagctccagttc 43153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gctcgtcggcaactactccgg 189 ||||||||||||||||||||| Sbjct: 42366 gctcgtcggcaactactccgg 42386
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 8e-34 Identities = 223/272 (81%), Gaps = 6/272 (2%) Strand = Plus / Plus Query: 246 acaacgtgctgcgggtggtgctctcggcgatgtacagctccgggtgggtggggatggcct 305 ||||||||||| |||||||||| ||| ||||||||||| | |||||||||||||||| | Sbjct: 27446752 acaacgtgctgagggtggtgctgtcgacgatgtacagcacggggtgggtggggatggggt 27446811 Query: 306 tctccaaggacggcctcatggtgggctcgagcgccatggttgggtgggtcggcaagacgg 365 ||||| ||||||||||||||||||||||||||||||||| |||||| |||| || || Sbjct: 27446812 tctcccgggacggcctcatggtgggctcgagcgccatggtcgggtggatcgggcggaagg 27446871 Query: 366 ggcagccccacgtcaagcagttcgccctcaacggcaaggcgccctccatggtcgtcgccg 425 | | || ||||||||||||||||| || ||||||| || | || ||| |||| | Sbjct: 27446872 gcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgagcggcaaggtggtcgtca 27446931 Query: 426 acaggggattcctcgtctcca------acaaccgcgaccacaccgtcctcgtcaagcagg 479 || | || ||||||||||||| |||||| ||||||||||||| | || |||||| Sbjct: 27446932 accgcggcttcctcgtctccaactccaacaaccacgaccacaccgtcgtggtgcagcagg 27446991 Query: 480 ccaagatctacctcgccttccagctcaagttc 511 ||| |||||||||||| ||||||||| ||||| Sbjct: 27446992 ccaggatctacctcgcgttccagctccagttc 27447023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gctcgtcggcaactactccgg 189 ||||||||||||||||||||| Sbjct: 27446236 gctcgtcggcaactactccgg 27446256 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcgtcgtcgcgctcgccgcc 100 |||||||||||||||||||| Sbjct: 14815175 tcgtcgtcgcgctcgccgcc 14815194
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence Length = 184457 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 70 cgccgcgatgctcgtcgtcgcgctcgc 96 |||||||||||||| |||||||||||| Sbjct: 96347 cgccgcgatgctcgccgtcgcgctcgc 96373
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 123 gggtgacggcgcagaccggcagc 145 ||||||||||||||||||||||| Sbjct: 4252953 gggtgacggcgcagaccggcagc 4252931
>ref|XM_473024.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tctacctcgccttccagctca 506 ||||||||||||||||||||| Sbjct: 470 tctacctcgccttccagctca 490
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcgacgacgcgctgccgcccg 167 ||||||||||||||||||||| Sbjct: 374369 gcgacgacgcgctgccgcccg 374349 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 72 ccgcgatgctcgtcgtcgcgctcgccgc 99 ||||||||| | |||||||||||||||| Sbjct: 1180640 ccgcgatgcgcctcgtcgcgctcgccgc 1180667
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 66 tcggcgccgcgatgctcgtcgtcgcgctcgccg 98 |||||| ||||||||||| || ||||||||||| Sbjct: 3085331 tcggcggcgcgatgctcggcggcgcgctcgccg 3085363
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcgacgacgcgctgccgcccg 167 ||||||||||||||||||||| Sbjct: 1105050 gcgacgacgcgctgccgcccg 1105030 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 ccgcgatgctcgtcgtcgcgctcgccgc 99 ||||||||| | |||||||||||||||| Sbjct: 2334980 ccgcgatgcgcctcgtcgcgctcgccgc 2334953
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 66 tcggcgccgcgatgctcgtcgtcgcgctcgccg 98 |||||| ||||||||||| || ||||||||||| Sbjct: 1264153 tcggcggcgcgatgctcggcggcgcgctcgccg 1264185
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcgacgacgcgctgccgcccg 167 ||||||||||||||||||||| Sbjct: 986013 gcgacgacgcgctgccgcccg 985993 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 72 ccgcgatgctcgtcgtcgcgctcgccgc 99 ||||||||| | |||||||||||||||| Sbjct: 2049629 ccgcgatgcgcctcgtcgcgctcgccgc 2049656
>gb|AC099642.4| Mus musculus chromosome 15, clone RP24-346F18, complete sequence Length = 138009 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gggtggggatggccttctccaagga 315 ||||||||||| ||||||||||||| Sbjct: 91289 gggtggggatgcccttctccaagga 91265
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ggtcggcaagacggggcagccccac 376 |||||||||||||||| |||||||| Sbjct: 1390317 ggtcggcaagacgggggagccccac 1390341
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 tcggcgccgcgatgctcgtcgtcgcgctcgccg 98 |||||| ||||||||||| || ||||||||||| Sbjct: 1371256 tcggcggcgcgatgctcggcggcgcgctcgccg 1371224
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tctacctcgccttccagctca 506 ||||||||||||||||||||| Sbjct: 24742668 tctacctcgccttccagctca 24742688
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 54 gcgcgtccggcgtcggcgccgcgatgctcgtcgtcgc 90 |||||||| || ||||||| ||||| ||||||||||| Sbjct: 20832840 gcgcgtccagcctcggcgcggcgatcctcgtcgtcgc 20832804
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 tggcgcgcgcgtccggcgtcggcgccgcg 76 ||||||||||| |||||| |||||||||| Sbjct: 338859 tggcgcgcgcggccggcgacggcgccgcg 338831
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 54 gcgcgtccggcgtcggcgccgcgatgctcgtcgtcgc 90 |||||||| || ||||||| ||||| ||||||||||| Sbjct: 34571 gcgcgtccagcctcggcgcggcgatcctcgtcgtcgc 34535
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cgccgcgatgctcgtcgtcgcgctcgccg 98 ||||| |||||||||| |||||||||||| Sbjct: 200762 cgccgtgatgctcgtcttcgcgctcgccg 200734 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ggcgtcggcgccgcgatgct 81 |||||||||||||||||||| Sbjct: 2676560 ggcgtcggcgccgcgatgct 2676579
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 tgctcgtcgtcgcgctcgccg 98 ||||||||||||||||||||| Sbjct: 1577277 tgctcgtcgtcgcgctcgccg 1577257
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 54 gcgcgtccggcgtcggcgccgcgatgctcgtcgtcgc 90 |||||||| || ||||||| ||||| ||||||||||| Sbjct: 20759054 gcgcgtccagcctcggcgcggcgatcctcgtcgtcgc 20759018
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 54 gcgcgtccggcgtcggcgccgcgatgctcgtcgtcgc 90 |||||||| || ||||||| ||||| ||||||||||| Sbjct: 130681 gcgcgtccagcctcggcgcggcgatcctcgtcgtcgc 130645
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tctacctcgccttccagctca 506 ||||||||||||||||||||| Sbjct: 132191 tctacctcgccttccagctca 132211
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 tctacctcgccttccagctca 506 ||||||||||||||||||||| Sbjct: 4384 tctacctcgccttccagctca 4404
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 cgcagggcggggacaacgtgctgc 257 |||||||||||| ||||||||||| Sbjct: 3622197 cgcagggcggggtcaacgtgctgc 3622220
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 gccgcgatgctcgtcgtcgcgctc 94 ||||||||||||| |||||||||| Sbjct: 681397 gccgcgatgctcgccgtcgcgctc 681374
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcgtcgtcgcgctcgccgcc 100 |||||||||||||||||||| Sbjct: 41517 tcgtcgtcgcgctcgccgcc 41536
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcgtcgtcgcgctcgccgcc 100 |||||||||||||||||||| Sbjct: 150589 tcgtcgtcgcgctcgccgcc 150608
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tcaagcagttcgccctcaac 397 |||||||||||||||||||| Sbjct: 885370 tcaagcagttcgccctcaac 885389
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gacgcgctgccgcccgagct 171 |||||||||||||||||||| Sbjct: 36856 gacgcgctgccgcccgagct 36837
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gacgcgctgccgcccgagct 171 |||||||||||||||||||| Sbjct: 13739 gacgcgctgccgcccgagct 13758
>gb|AF067617.1| Caenorhabditis elegans cosmid T04D1, complete sequence Length = 28678 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 cgcagctcaagcagcagcag 535 |||||||||||||||||||| Sbjct: 17766 cgcagctcaagcagcagcag 17747
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcgcgccgggggtgacggcg 133 |||||||||||||||||||| Sbjct: 2230837 tcgcgccgggggtgacggcg 2230856
>ref|XM_417819.1| PREDICTED: Gallus gallus similar to Microtubule-actin crosslinking factor 1, isoforms 1/2/3 (Actin cross-linking family protein 7) (Macrophin 1) (Trabeculin-alpha) (620 kDa actin-binding protein) (ABP620) (LOC419672), mRNA Length = 4641 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gcagctcaagcagcagcagg 536 |||||||||||||||||||| Sbjct: 4311 gcagctcaagcagcagcagg 4330
>ref|XM_957840.1| Neurospora crassa OR74A hypothetical protein (NCU06217.1) partial mRNA Length = 2319 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcgtcaagcaggccaagatc 487 |||||||||||||||||||| Sbjct: 1730 tcgtcaagcaggccaagatc 1749
>ref|XM_326071.1| Neurospora crassa OR74A hypothetical protein (NCU06217.1) partial mRNA Length = 2319 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcgtcaagcaggccaagatc 487 |||||||||||||||||||| Sbjct: 1730 tcgtcaagcaggccaagatc 1749
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 122 ggggtgacggcgcag-accggcagctgc 148 ||||||||||||||| |||||||||||| Sbjct: 576004 ggggtgacggcgcagcaccggcagctgc 575977
>gb|AY462631.1| Plasmodium falciparum erythrocyte membrane protein 1 (var) mRNA, partial cds, CIDR1alpha region Length = 393 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 aagcagcagcaggtgctctt 543 |||||||||||||||||||| Sbjct: 324 aagcagcagcaggtgctctt 343
>ref|XM_755172.1| Ustilago maydis 521 hypothetical protein (UM04118.1) partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gatgctcgtcgtcgcgctcg 95 |||||||||||||||||||| Sbjct: 157 gatgctcgtcgtcgcgctcg 138
>gb|AY372243.1| Psittacid herpesvirus 1 isolate 97-0001, complete genome Length = 163025 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cgaggcctttcacggcgtcggtgg 32 |||||||||||||||| ||||||| Sbjct: 85994 cgaggcctttcacggcctcggtgg 85971
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ggcgtcggcgccgcgatgct 81 |||||||||||||||||||| Sbjct: 2051347 ggcgtcggcgccgcgatgct 2051328
>emb|X68650.1|OCRYARA O.cuniculus mRNA for ryanodine receptor Length = 15541 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cgagcgccatggttgggtgg 352 |||||||||||||||||||| Sbjct: 4617 cgagcgccatggttgggtgg 4636
>emb|AJ238307.1|OMY238307 Oncorhynchus mykiss mRNA for cyclooxygenase-2 Length = 2653 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| || ||||| Sbjct: 1096 cttccagctcaagttcgacccggagctc 1123
>tpg|BK005078.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 75 (WRKY75) gene, complete cds Length = 4697 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcgtcgtcgcgctcgccgcc 100 |||||||||||||||||||| Sbjct: 547 tcgtcgtcgcgctcgccgcc 566
>ref|NM_137980.1| Drosophila melanogaster CG12491-RA (CG12491), mRNA Length = 617 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 131 cttccagctcaagttcgacacccagctc 158
>ref|NM_137979.1| Drosophila melanogaster CG13560-RA (CG13560), mRNA Length = 954 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 877 cttccagctcaagttcgacacccagctc 850
>gb|AC104120.2| Homo sapiens chromosome 5 clone RP11-404L6, complete sequence Length = 123372 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gcccgagctcgtcggcaact 182 |||||||||||||||||||| Sbjct: 119228 gcccgagctcgtcggcaact 119209
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gctgccgcccgagctcgtcg 176 |||||||||||||||||||| Sbjct: 266876 gctgccgcccgagctcgtcg 266895
>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence Length = 132573 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gcccgagctcgtcggcaact 182 |||||||||||||||||||| Sbjct: 111727 gcccgagctcgtcggcaact 111746
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 gcgcgtccggcgtcggcgccgcga 77 ||||| |||||||||||||||||| Sbjct: 4316366 gcgcggccggcgtcggcgccgcga 4316389
>ref|NM_059025.2| Caenorhabditis elegans T04D1.4 (helicase) mRNA, complete cds Length = 9397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 cgcagctcaagcagcagcag 535 |||||||||||||||||||| Sbjct: 8334 cgcagctcaagcagcagcag 8353
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 cgacgcgctgccgcccgagctcgt 174 ||||||||||||| |||||||||| Sbjct: 2784700 cgacgcgctgccggccgagctcgt 2784723
>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone BACR02E09, complete sequence Length = 175118 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 94406 cttccagctcaagttcgacacccagctc 94433 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 93313 cttccagctcaagttcgacacccagctc 93286
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gacgcgctgccgcccgagct 171 |||||||||||||||||||| Sbjct: 14790204 gacgcgctgccgcccgagct 14790223
>gb|AC136768.4| Homo sapiens chromosome 15, clone RP11-692H4, complete sequence Length = 54864 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tggggatggccttctccaag 313 |||||||||||||||||||| Sbjct: 8143 tggggatggccttctccaag 8162
>gb|AC104229.18| Homo sapiens chromosome 15, clone RP11-23A22, complete sequence Length = 168235 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tggggatggccttctccaag 313 |||||||||||||||||||| Sbjct: 144703 tggggatggccttctccaag 144722
>gb|AF158373.1|AF158373 Salvelinus fontinalis prostaglandin endoperoxide synthase-2 (PGS-2) mRNA, complete cds Length = 2539 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| || ||||| Sbjct: 1111 cttccagctcaagttcgacccggagctc 1138
>emb|AJ325712.1|HSA325712 Homo sapiens genomic sequence surrounding NotI site, clone NB1-178S Length = 1109 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 acagctccgggtgggtgggg 298 |||||||||||||||||||| Sbjct: 1080 acagctccgggtgggtgggg 1061
>ref|NM_208701.1| Eremothecium gossypii ACL056Cp (ACL056C), mRNA Length = 678 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gctgccgcccgagctcgtcg 176 |||||||||||||||||||| Sbjct: 433 gctgccgcccgagctcgtcg 414
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgcgcgcgtccggcgtcgg 69 |||||||||||||||||||| Sbjct: 295403 gcgcgcgcgtccggcgtcgg 295422
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 272004 cttccagctcaagttcgacacccagctc 272031 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 496 cttccagctcaagttcgactcgcagctc 523 ||||||||||||||||||| | |||||| Sbjct: 270911 cttccagctcaagttcgacacccagctc 270884
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tcaagcagttcgccctcaac 397 |||||||||||||||||||| Sbjct: 821042 tcaagcagttcgccctcaac 821061
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gacgcgctgccgcccgagct 171 |||||||||||||||||||| Sbjct: 14870641 gacgcgctgccgcccgagct 14870660
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 cttccagctcaagttcgact 515 |||||||||||||||||||| Sbjct: 240086 cttccagctcaagttcgact 240067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,816,202 Number of Sequences: 3902068 Number of extensions: 3816202 Number of successful extensions: 78113 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 72724 Number of HSP's gapped (non-prelim): 5401 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
