ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 80 3e-15
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 70 4e-12
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 37 0.038
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 35 0.19
5LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 32 0.92
6FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [... 30 4.6
7C4BP_RAT (Q63514) C4b-binding protein alpha chain precursor (C4bp) 30 6.0
8XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose transpor... 30 6.0
9YJGB_BACSU (O34960) Hypothetical protein yjgB precursor 29 7.8

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
 Frame = +3

Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353
           P  + FGDS+ D GNNN     L + NY  YG+D+P GVATGRF+NGR   DY++   G+
Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKL-KCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 354 XXXXXXXXXXXADDN-------FLAGVNLASGGAGILNETGVYFVEYFSFDEQISCLETV 512
                         N        L GV+ ASGGAG L +T   + +  +  +Q++  +  
Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESW-KVTTMLDQLTYFQDY 241

Query: 513 KRAMIAKIGKEAAEE 557
           K+ M   +GK+  ++
Sbjct: 242 KKRMKKLVGKKKTKK 256



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +3

Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353
           P  + FGDS+ D GNNN  +  + +SNY  YG+D+   VATGRF+NG    DY+A   G+
Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKI-KSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 354 XXXXXXXXXXXADDN-FLAGVNLASGGAG 437
                         N  L GV+ ASGGAG
Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAG 290



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
 Frame = +3

Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNY-PWYGIDYPNGVATGRFTNGRTIGDYMAAKFG 350
           P  + FGDS SD G      LS A     P +G  +  G   GR+ +GR + D++A   G
Sbjct: 29  PAIFNFGDSNSDTGG-----LSAAFGQAGPPHGSSF-FGSPAGRYCDGRLVIDFIAESLG 82

Query: 351 IXXXXXXXXXXXADDNFLAGVNLASGGAGI--LNET-----------GVYFVEYFSF 482
           +              NF  G N A+ G+ I  LN T            V FV++++F
Sbjct: 83  L--PYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNF 137



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +3

Query: 174 PVTYVFGDSMSDVGNNN--YFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKF 347
           P  + FGDS SD G     ++ L+      P YG  + +  +TGR+++GR I D++A  F
Sbjct: 33  PAIFNFGDSNSDTGGKAAAFYPLN------PPYGETFFHR-STGRYSDGRLIIDFIAESF 85

Query: 348 GIXXXXXXXXXXXADDNFLAGVNLASGGAGI 440
            +           +  NF  G + A+ G+ I
Sbjct: 86  NLPYLSPYLSSLGS--NFKHGADFATAGSTI 114



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 26/84 (30%), Positives = 35/84 (41%)
 Frame = +3

Query: 183 YVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGIXXX 362
           YVFGDS+SD GNN              Y +D  NG      T  +   D++A + GI   
Sbjct: 29  YVFGDSLSDGGNNGR------------YTVDGING------TESKLYNDFIAQQLGIELV 70

Query: 363 XXXXXXXXADDNFLAGVNLASGGA 434
                     ++   G N A+GGA
Sbjct: 71  ----------NSKKGGTNYAAGGA 84



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>FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 708

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 216 NNNYFQLSLARSNYPWYGIDYP 281
           NNN FQLS    +Y W  ID P
Sbjct: 3   NNNAFQLSFDEQHYAWLAIDVP 24



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>C4BP_RAT (Q63514) C4b-binding protein alpha chain precursor (C4bp)|
          Length = 558

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
 Frame = +3

Query: 180 TYVFGDSMSDVGNNNYFQLSLARSNYPWY--------GIDYPNGVATGRFT 308
           TY FGD +S    N+    +  +S+  W+          D+P  +A GR+T
Sbjct: 352 TYFFGDEVSYTCQNDIMLTATCKSDGTWHPRTPSCHQSCDFPPAIAHGRYT 402



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>XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose transporter)|
          Length = 457

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 429 GAGILNETGVYFVEYFSFDEQISCLETVKRAMIAKIGKEAAE 554
           G GIL    ++FV+   F+ +   LE ++  + AK G++AAE
Sbjct: 411 GYGILCFASIWFVQKKVFETRNRSLEDIEATLRAKTGEDAAE 452



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>YJGB_BACSU (O34960) Hypothetical protein yjgB precursor|
          Length = 191

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 165 TKGPVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDY 278
           TKG V   FG+    VG +N F L       P YG  Y
Sbjct: 76  TKGDVHAAFGEPERPVGGDNRFDLYHWNMGQPGYGFSY 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,967,857
Number of Sequences: 219361
Number of extensions: 762298
Number of successful extensions: 2051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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