Clone Name | bart29d07 |
---|---|
Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 80.5 bits (197), Expect = 3e-15 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353 P + FGDS+ D GNNN L + NY YG+D+P GVATGRF+NGR DY++ G+ Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKL-KCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 354 XXXXXXXXXXXADDN-------FLAGVNLASGGAGILNETGVYFVEYFSFDEQISCLETV 512 N L GV+ ASGGAG L +T + + + +Q++ + Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESW-KVTTMLDQLTYFQDY 241 Query: 513 KRAMIAKIGKEAAEE 557 K+ M +GK+ ++ Sbjct: 242 KKRMKKLVGKKKTKK 256
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 70.1 bits (170), Expect = 4e-12 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGI 353 P + FGDS+ D GNNN + + +SNY YG+D+ VATGRF+NG DY+A G+ Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKI-KSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 354 XXXXXXXXXXXADDN-FLAGVNLASGGAG 437 N L GV+ ASGGAG Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGAG 290
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 37.0 bits (84), Expect = 0.038 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 14/117 (11%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNNYFQLSLARSNY-PWYGIDYPNGVATGRFTNGRTIGDYMAAKFG 350 P + FGDS SD G LS A P +G + G GR+ +GR + D++A G Sbjct: 29 PAIFNFGDSNSDTGG-----LSAAFGQAGPPHGSSF-FGSPAGRYCDGRLVIDFIAESLG 82 Query: 351 IXXXXXXXXXXXADDNFLAGVNLASGGAGI--LNET-----------GVYFVEYFSF 482 + NF G N A+ G+ I LN T V FV++++F Sbjct: 83 L--PYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNF 137
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 34.7 bits (78), Expect = 0.19 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Frame = +3 Query: 174 PVTYVFGDSMSDVGNNN--YFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKF 347 P + FGDS SD G ++ L+ P YG + + +TGR+++GR I D++A F Sbjct: 33 PAIFNFGDSNSDTGGKAAAFYPLN------PPYGETFFHR-STGRYSDGRLIIDFIAESF 85 Query: 348 GIXXXXXXXXXXXADDNFLAGVNLASGGAGI 440 + + NF G + A+ G+ I Sbjct: 86 NLPYLSPYLSSLGS--NFKHGADFATAGSTI 114
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 32.3 bits (72), Expect = 0.92 Identities = 26/84 (30%), Positives = 35/84 (41%) Frame = +3 Query: 183 YVFGDSMSDVGNNNYFQLSLARSNYPWYGIDYPNGVATGRFTNGRTIGDYMAAKFGIXXX 362 YVFGDS+SD GNN Y +D NG T + D++A + GI Sbjct: 29 YVFGDSLSDGGNNGR------------YTVDGING------TESKLYNDFIAQQLGIELV 70 Query: 363 XXXXXXXXADDNFLAGVNLASGGA 434 ++ G N A+GGA Sbjct: 71 ----------NSKKGGTNYAAGGA 84
>FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [Includes:| Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)] Length = 708 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 216 NNNYFQLSLARSNYPWYGIDYP 281 NNN FQLS +Y W ID P Sbjct: 3 NNNAFQLSFDEQHYAWLAIDVP 24
>C4BP_RAT (Q63514) C4b-binding protein alpha chain precursor (C4bp)| Length = 558 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Frame = +3 Query: 180 TYVFGDSMSDVGNNNYFQLSLARSNYPWY--------GIDYPNGVATGRFT 308 TY FGD +S N+ + +S+ W+ D+P +A GR+T Sbjct: 352 TYFFGDEVSYTCQNDIMLTATCKSDGTWHPRTPSCHQSCDFPPAIAHGRYT 402
>XYLT_LACBR (O52733) D-xylose-proton symporter (D-xylose transporter)| Length = 457 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 429 GAGILNETGVYFVEYFSFDEQISCLETVKRAMIAKIGKEAAE 554 G GIL ++FV+ F+ + LE ++ + AK G++AAE Sbjct: 411 GYGILCFASIWFVQKKVFETRNRSLEDIEATLRAKTGEDAAE 452
>YJGB_BACSU (O34960) Hypothetical protein yjgB precursor| Length = 191 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = +3 Query: 165 TKGPVTYVFGDSMSDVGNNNYFQLSLARSNYPWYGIDY 278 TKG V FG+ VG +N F L P YG Y Sbjct: 76 TKGDVHAAFGEPERPVGGDNRFDLYHWNMGQPGYGFSY 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,967,857 Number of Sequences: 219361 Number of extensions: 762298 Number of successful extensions: 2051 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2027 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2045 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)