>FER_MYCTU (P64122) Ferredoxin|
          Length = 113

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 240 DADSRKPTCRAVIQDATLWPEAVDSDWHQHLGGNLLYTRFHVLL 371
           D  + KP CR    +A  W   +  D HQHLG N  +  FH +L
Sbjct: 41  DCGACKPACRV---EAIYWEGDLPDDQHQHLGDNAAF--FHQVL 79

>FER_MYCBO (P64123) Ferredoxin|
          Length = 113

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 240 DADSRKPTCRAVIQDATLWPEAVDSDWHQHLGGNLLYTRFHVLL 371
           D  + KP CR    +A  W   +  D HQHLG N  +  FH +L
Sbjct: 41  DCGACKPACRV---EAIYWEGDLPDDQHQHLGDNAAF--FHQVL 79

>DLL4_XENLA (P53775) Homeobox protein DLL-4 (XDLL-4)|
          Length = 285

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = -3

Query: 565 VPAFSQNLCHEASPAPSTCGFLALDSS------QQQHAGALHPLQSP*IHRGFEILGSYQ 404
           +P+ S +  H++  +P+     A DSS      QQQH GA+ P         +  LGSYQ
Sbjct: 17  MPSSSYHSLHKSQESPTLPVSTATDSSYYTNQQQQQHCGAVSP---------YGQLGSYQ 67

Query: 403 QTSSASSGI 377
              +A +GI
Sbjct: 68  FHGAAINGI 76

>HUTU_BACHD (Q9KBE5) Urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 559

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 130 RYPRRLTHSLPRAAGW-SCCGTSGD*LSVGVEGEAAPAH 17
           +Y  R+T SL +A  W S     G+ LS+G+ G AA  H
Sbjct: 207 KYTDRITESLDQALAWASEAKAKGEPLSIGLVGNAAHLH 245

>AINX_HUMAN (Q16352) Alpha-internexin (Alpha-Inx) (66 kDa neurofilament|
           protein) (Neurofilament-66) (NF-66)
          Length = 499

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 139 GGWHRCSCRSKNPRGASGRRPPGVSRSTGCSNLEMPTAESLRAELSSKTPP 291
           G   R S R     GA G R   +SRS   S+    +A SL   L+ + PP
Sbjct: 20  GDGSRLSARLSGAGGAGGFRSQSLSRSNVASSAACSSASSLGLGLAYRRPP 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.134    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,840,880
Number of Sequences: 219361
Number of extensions: 1463099
Number of successful extensions: 4040
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4040
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)