ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 272 1e-69
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
3dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene f... 272 1e-69
4dbj|AK103003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
5dbj|AK073182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 272 1e-69
7ref|NM_197177.1| Oryza sativa (japonica cultivar-group) putative... 268 2e-68
8emb|AJ830722.1| Zea mays pk8-a gene for putative protein kinase,... 105 2e-19
9emb|AJ830721.1| Zea mays mRNA for putative protein kinase (pk8-a... 105 2e-19
10emb|AJ832128.1| Zea mays partial mRNA for putative protein kinas... 90 9e-15
11emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase,... 90 9e-15
12gb|AY105420.1| Zea mays PCO117595 mRNA sequence 62 2e-06
13gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.9
14gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome... 42 1.9
15gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence 42 1.9
16dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.9
17ref|XM_343138.2| PREDICTED: Rattus norvegicus similar to Hypothe... 42 1.9
18ref|XM_307982.2| Anopheles gambiae str. PEST ENSANGP00000006292 ... 42 1.9
19gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 42 1.9
20ref|NM_106376.3| Arabidopsis thaliana unknown protein AT1G77270 ... 40 7.7
21ref|NM_191156.1| Oryza sativa (japonica cultivar-group), predic... 40 7.7
22ref|XM_516294.1| PREDICTED: Pan troglodytes similar to brefeldin... 40 7.7
23ref|XM_515636.1| PREDICTED: Pan troglodytes similar to cytochrom... 40 7.7
24gb|BC010267.1| Homo sapiens IQ motif and Sec7 domain 1, mRNA (cD... 40 7.7
25gb|AY653734.1| Homo sapiens brefeldin resistant Arf-GEF 2b isofo... 40 7.7
26ref|XM_958469.1| Neurospora crassa OR74A related to verrucotoxin... 40 7.7
27ref|XM_330817.1| Neurospora crassa OR74A related to verrucotoxin... 40 7.7
28gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.7
29gb|AC006808.1| Caenorhabditis elegans cosmid Y58G8A, complete se... 40 7.7
30gb|AY096420.1| Arabidopsis thaliana unknown protein (At1g77270) ... 40 7.7
31gb|AY074315.1| Arabidopsis thaliana unknown protein (At1g77270) ... 40 7.7
32ref|NM_001031196.1| Gallus gallus LOC423249 (LOC423249), mRNA 40 7.7
33gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, com... 40 7.7
34emb|AL390354.1|NCB24M22 Neurospora crassa DNA linkage group II B... 40 7.7
35emb|AJ719363.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.7
36gb|DQ116388.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 7.7
37ref|NM_014869.3| Homo sapiens IQ motif and Sec7 domain 1 (IQSEC1... 40 7.7
38dbj|AK221395.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 7.7
39ref|NM_001029094.2| Caenorhabditis elegans Y58G8A.4b (Y58G8A.4) ... 40 7.7
40ref|NM_001029093.2| Caenorhabditis elegans Y58G8A.4a (Y58G8A.4) ... 40 7.7
41gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 40 7.7
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
43gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, compl... 40 7.7
44gb|AC110619.3| Homo sapiens BAC clone RP11-649N20 from 2, comple... 40 7.7
45gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I1... 40 7.7
46gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B... 40 7.7
47dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
48gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, comple... 40 7.7
49gb|AY884165.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 7.7
50gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genom... 40 7.7
51gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Pa... 40 7.7
52dbj|AB018306.1| Homo sapiens mRNA for KIAA0763 protein, partial cds 40 7.7
53dbj|AK065656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
54gb|M59250.1|HUMCOX5B Homo sapiens cytochrome c oxidase subunit V... 40 7.7
55gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p... 40 7.7
56gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 40 7.7 
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
             sequence
          Length = 136120

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Minus

                                                                         
Query: 239   agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
             ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 51241 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 51182

                                                                         
Query: 299   tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
             ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 51181 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 51122

                                                                         
Query: 359   tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
             |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 51121 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 51062

                                                                         
Query: 419   tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
             ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 51061 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 51002

                                                                         
Query: 479   ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
             |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 51001 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 50942

                                          
Query: 539   acaaagattctgggaaaatgctgggacac 567
             | |||||||| ||||||||||||| ||||
Sbjct: 50941 agaaagattcagggaaaatgctggcacac 50913
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Plus

                                                                            
Query: 239      agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
                ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 18455452 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 18455511

                                                                            
Query: 299      tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
                ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 18455512 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 18455571

                                                                            
Query: 359      tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
                |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 18455572 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 18455631

                                                                            
Query: 419      tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
                ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 18455632 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 18455691

                                                                            
Query: 479      ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
                |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 18455692 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 18455751

                                             
Query: 539      acaaagattctgggaaaatgctgggacac 567
                | |||||||| ||||||||||||| ||||
Sbjct: 18455752 agaaagattcagggaaaatgctggcacac 18455780
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>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer,
             PPR794, PPR683, PPR762 genes for hypothetical protein,
             complete cds
          Length = 76363

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Plus

                                                                         
Query: 239   agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
             ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 70499 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 70558

                                                                         
Query: 299   tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
             ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 70559 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 70618

                                                                         
Query: 359   tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
             |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 70619 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 70678

                                                                         
Query: 419   tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
             ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 70679 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 70738

                                                                         
Query: 479   ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
             |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 70739 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 70798

                                          
Query: 539   acaaagattctgggaaaatgctgggacac 567
             | |||||||| ||||||||||||| ||||
Sbjct: 70799 agaaagattcagggaaaatgctggcacac 70827
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>dbj|AK103003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G17, full
           insert sequence
          Length = 2419

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Plus

                                                                       
Query: 239 agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
           ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 518 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 577

                                                                       
Query: 299 tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
           ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 578 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 637

                                                                       
Query: 359 tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
           |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 638 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 697

                                                                       
Query: 419 tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
           ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 698 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 757

                                                                       
Query: 479 ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
           |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 758 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 817

                                        
Query: 539 acaaagattctgggaaaatgctgggacac 567
           | |||||||| ||||||||||||| ||||
Sbjct: 818 agaaagattcagggaaaatgctggcacac 846
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>dbj|AK073182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001F09, full
           insert sequence
          Length = 2373

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Plus

                                                                       
Query: 239 agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
           ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 494 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 553

                                                                       
Query: 299 tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
           ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 554 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 613

                                                                       
Query: 359 tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
           |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 614 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 673

                                                                       
Query: 419 tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
           ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 674 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 733

                                                                       
Query: 479 ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
           |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 734 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 793

                                        
Query: 539 acaaagattctgggaaaatgctgggacac 567
           | |||||||| ||||||||||||| ||||
Sbjct: 794 agaaagattcagggaaaatgctggcacac 822
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  272 bits (137), Expect = 1e-69
 Identities = 281/329 (85%)
 Strand = Plus / Plus

                                                                            
Query: 239      agatgccgacagccgaaagcctacgtgcagagctgtcatccaagacgccaccctttggcc 298
                ||||| ||||||  |||| ||| ||||||||||| ||||||| |||||| || || ||  
Sbjct: 18465505 agatgtcgacaggtgaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtt 18465564

                                                                            
Query: 299      tgaggctgtggatagtgattggcatcagcatctgggtggtaatcttctgtatactaggtt 358
                ||||||| ||||| |||||||| ||||| || |||||||| ||||||| |||||||||||
Sbjct: 18465565 tgaggctatggattgtgattggaatcagtatttgggtggtgatcttctttatactaggtt 18465624

                                                                            
Query: 359      tcatgtgcttctggtccatataccggaggaagccgaagaagtctgttgataagatcccag 418
                |||||||| |||||||||||||||| |||||||||||||||||  |||||||||| ||||
Sbjct: 18465625 tcatgtgcctctggtccatataccgaaggaagccgaagaagtcctttgataagattccag 18465684

                                                                            
Query: 419      tatctcaaatccccgatgtatctaaggagattgcagtggatgaagtgcgccagcatgctg 478
                ||||||||||||| ||||| || |||||||||||||| |||||||| ||  |||||||||
Sbjct: 18465685 tatctcaaatcccggatgtttccaaggagattgcagtagatgaagttcgtgagcatgctg 18465744

                                                                            
Query: 479      ttgttgagaactatcaagtgcaagaaagccacacgttgacggtgcaggagaagcctcatg 538
                |||| || ||||  |  ||||||||||||||| || |  ||||||||||||| | | | |
Sbjct: 18465745 ttgtcgaaaacttccgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacg 18465804

                                             
Query: 539      acaaagattctgggaaaatgctgggacac 567
                | |||||||| ||||||||||||| ||||
Sbjct: 18465805 agaaagattcagggaaaatgctggcacac 18465833
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>ref|NM_197177.1| Oryza sativa (japonica cultivar-group) putative kinase
           (OSJNBa0017E08.16), mRNA
          Length = 1563

 Score =  268 bits (135), Expect = 2e-68
 Identities = 270/315 (85%)
 Strand = Plus / Plus

                                                                       
Query: 253 gaaagcctacgtgcagagctgtcatccaagacgccaccctttggcctgaggctgtggata 312
           |||| ||| ||||||||||| ||||||| |||||| || || ||  ||||||| ||||| 
Sbjct: 13  gaaaccctgcgtgcagagctatcatccaggacgccgcctttcggtttgaggctatggatt 72

                                                                       
Query: 313 gtgattggcatcagcatctgggtggtaatcttctgtatactaggtttcatgtgcttctgg 372
           |||||||| ||||| || |||||||| ||||||| ||||||||||||||||||| |||||
Sbjct: 73  gtgattggaatcagtatttgggtggtgatcttctttatactaggtttcatgtgcctctgg 132

                                                                       
Query: 373 tccatataccggaggaagccgaagaagtctgttgataagatcccagtatctcaaatcccc 432
           ||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||| 
Sbjct: 133 tccatataccgaaggaagccgaagaagtcctttgataagattccagtatctcaaatcccg 192

                                                                       
Query: 433 gatgtatctaaggagattgcagtggatgaagtgcgccagcatgctgttgttgagaactat 492
           ||||| || |||||||||||||| |||||||| ||  ||||||||||||| || ||||  
Sbjct: 193 gatgtttccaaggagattgcagtagatgaagttcgtgagcatgctgttgtcgaaaacttc 252

                                                                       
Query: 493 caagtgcaagaaagccacacgttgacggtgcaggagaagcctcatgacaaagattctggg 552
           |  ||||||||||||||| || |  ||||||||||||| | | | || |||||||| |||
Sbjct: 253 cgtgtgcaagaaagccacgcgatatcggtgcaggagaaacattacgagaaagattcaggg 312

                          
Query: 553 aaaatgctgggacac 567
           |||||||||| ||||
Sbjct: 313 aaaatgctggcacac 327
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>emb|AJ830722.1| Zea mays pk8-a gene for putative protein kinase, exons 1-8
          Length = 5378

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                        
Query: 268  gagctgtcatccaagacgccaccctttggcctgaggctgtggatagtgattggcatcagc 327
            ||||| || |||| |||||| || || ||||||||||| ||||| || ||||||||| ||
Sbjct: 1436 gagctatcttccaggacgccgccgttcggcctgaggctatggattgtcattggcatctgc 1495

                                                                        
Query: 328  atctgggtggtaatcttctgtatactaggtttcatgtgcttctggtccatataccggagg 387
            ||||||||||  ||| |||  ||  |||| ||||||||||||||||||||||||||||||
Sbjct: 1496 atctgggtggcgatcctcttcatcataggcttcatgtgcttctggtccatataccggagg 1555

                 
Query: 388  aagcc 392
            |||||
Sbjct: 1556 aagcc 1560
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>emb|AJ830721.1| Zea mays mRNA for putative protein kinase (pk8-a gene)
          Length = 2336

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 gagctgtcatccaagacgccaccctttggcctgaggctgtggatagtgattggcatcagc 327
           ||||| || |||| |||||| || || ||||||||||| ||||| || ||||||||| ||
Sbjct: 443 gagctatcttccaggacgccgccgttcggcctgaggctatggattgtcattggcatctgc 502

                                                                       
Query: 328 atctgggtggtaatcttctgtatactaggtttcatgtgcttctggtccatataccggagg 387
           ||||||||||  ||| |||  ||  |||| ||||||||||||||||||||||||||||||
Sbjct: 503 atctgggtggcgatcctcttcatcataggcttcatgtgcttctggtccatataccggagg 562

                
Query: 388 aagcc 392
           |||||
Sbjct: 563 aagcc 567
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>emb|AJ832128.1| Zea mays partial mRNA for putative protein kinase (pk8-b gene)
          Length = 1552

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 277 tccaagacgccaccctttggcctgaggctgtggatagtgattggcatcagcatctgggtg 336
           |||| |||||| || || ||||||||||| ||||| |||||||||||| | ||||||| |
Sbjct: 26  tccaggacgccgccgttcggcctgaggctatggattgtgattggcatctgtatctgggcg 85

                                                                    
Query: 337 gtaatcttctgtatactaggtttcatgtgcttctggtccatataccggaggaagccg 393
            ||||| | |  || ||||| |||||||||||||||||| || ||||||||||||||
Sbjct: 86  ctaatcctgttcatcctaggcttcatgtgcttctggtccctacaccggaggaagccg 142
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>emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase, exons 1-7
          Length = 9397

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                        
Query: 277  tccaagacgccaccctttggcctgaggctgtggatagtgattggcatcagcatctgggtg 336
            |||| |||||| || || ||||||||||| ||||| |||||||||||| | ||||||| |
Sbjct: 4362 tccaggacgccgccgttcggcctgaggctatggattgtgattggcatctgtatctgggcg 4421

                                                                     
Query: 337  gtaatcttctgtatactaggtttcatgtgcttctggtccatataccggaggaagccg 393
             ||||| | |  || ||||| |||||||||||||||||| || ||||||||||||||
Sbjct: 4422 ctaatcctgttcatcctaggcttcatgtgcttctggtccctacaccggaggaagccg 4478
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>gb|AY105420.1| Zea mays PCO117595 mRNA sequence
          Length = 512

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 268 gagctgtcatccaagacgccaccctttggcctgaggctgtggatagtgattggcatcagc 327
           ||||| || |||| |||||| || || ||||||||||| ||||| || ||||||||| ||
Sbjct: 410 gagctatcttccaggacgccgccgttcggcctgaggctatggattgtcattggcatctgc 469

                                                      
Query: 328 atctgggtggtaatcttctgtatactaggtttcatgtgcttct 370
           ||||||||||  ||| |||  ||  |||| |||||||||||||
Sbjct: 470 atctgggtggcgatcctcttcatcataggcttcatgtgcttct 512
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 64      cggaggtgccgcagcagctccagcc 88
               |||| ||||||||||||||||||||
Sbjct: 6075358 cggatgtgccgcagcagctccagcc 6075334
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>gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome 9, complete
            sequence
          Length = 181542

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 305  tgtggatagtgattggcatcagcat 329
            ||||||||||||||||| |||||||
Sbjct: 5796 tgtggatagtgattggcttcagcat 5820
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>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence
          Length = 7479

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 71   gccgcagcagctccagccggc 91
            |||||||||||||||||||||
Sbjct: 1391 gccgcagcagctccagccggc 1371
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 72      ccgcagcagctccagccggcg 92
               |||||||||||||||||||||
Sbjct: 8221571 ccgcagcagctccagccggcg 8221551
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>ref|XM_343138.2| PREDICTED: Rattus norvegicus similar to Hypothetical protein
           FLJ32452 (LOC362810), mRNA
          Length = 1581

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 71  gccgcagcagctccagccggcggcgcgcg 99
           |||||||||||||| | ||||||||||||
Sbjct: 344 gccgcagcagctccgggcggcggcgcgcg 316
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>ref|XM_307982.2| Anopheles gambiae str. PEST ENSANGP00000006292
           (ENSANGG00000004788), partial mRNA
          Length = 1683

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 184 gcaagcgggaggcggccgcca 204
           |||||||||||||||||||||
Sbjct: 428 gcaagcgggaggcggccgcca 448
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>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 536    atgacaaagattctgggaaaa 556
              |||||||||||||||||||||
Sbjct: 185871 atgacaaagattctgggaaaa 185851
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>ref|NM_106376.3| Arabidopsis thaliana unknown protein AT1G77270 mRNA, complete cds
          Length = 2463

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 384 gaggaagccgaagaagtctg 403
           ||||||||||||||||||||
Sbjct: 260 gaggaagccgaagaagtctg 279
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>ref|NM_191156.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 gaggagcaagcgggaggcgg 198
           ||||||||||||||||||||
Sbjct: 93  gaggagcaagcgggaggcgg 112
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>ref|XM_516294.1| PREDICTED: Pan troglodytes similar to brefeldin resistant Arf-GEF 2b
            isoform (LOC460188), mRNA
          Length = 7134

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccgctgctcctgccgctcca 169
            ||||||||||||||||||||
Sbjct: 2076 ccgctgctcctgccgctcca 2057
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>ref|XM_515636.1| PREDICTED: Pan troglodytes similar to cytochrome c oxidase subunit
           Vb precursor; cytochrome c oxidase polypeptide VB,
           mitochondrial precursor; Mutations: 375:OK (LOC459426),
           mRNA
          Length = 780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 accgctgctcctgccgctcc 168
           ||||||||||||||||||||
Sbjct: 423 accgctgctcctgccgctcc 442
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>gb|BC010267.1| Homo sapiens IQ motif and Sec7 domain 1, mRNA (cDNA clone MGC:5112
            IMAGE:2900367), complete cds
          Length = 3782

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccgctgctcctgccgctcca 169
            ||||||||||||||||||||
Sbjct: 1114 ccgctgctcctgccgctcca 1095
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>gb|AY653734.1| Homo sapiens brefeldin resistant Arf-GEF 2b isoform mRNA, complete
            cds, alternatively spliced
          Length = 4414

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccgctgctcctgccgctcca 169
            ||||||||||||||||||||
Sbjct: 1122 ccgctgctcctgccgctcca 1103
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>ref|XM_958469.1| Neurospora crassa OR74A related to verrucotoxin alpha [MIPS]
           (NCU08701.1) partial mRNA
          Length = 3813

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 442 aaggagattgcagtggatgaagtg 465
           ||||||||||||| ||||||||||
Sbjct: 862 aaggagattgcagcggatgaagtg 885
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>ref|XM_330817.1| Neurospora crassa OR74A related to verrucotoxin alpha [MIPS]
           (NCU08701.1) partial mRNA
          Length = 3813

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 442 aaggagattgcagtggatgaagtg 465
           ||||||||||||| ||||||||||
Sbjct: 862 aaggagattgcagcggatgaagtg 885
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 183     agcaagcgggaggcggccgccagg 206
               |||||||| |||||||||||||||
Sbjct: 3321850 agcaagcgcgaggcggccgccagg 3321827
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>gb|AC006808.1| Caenorhabditis elegans cosmid Y58G8A, complete sequence
          Length = 34544

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   tatctaaggagattgcagtg 456
             ||||||||||||||||||||
Sbjct: 22129 tatctaaggagattgcagtg 22148
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>gb|AY096420.1| Arabidopsis thaliana unknown protein (At1g77270) mRNA, complete cds
          Length = 2080

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 384 gaggaagccgaagaagtctg 403
           ||||||||||||||||||||
Sbjct: 6   gaggaagccgaagaagtctg 25
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>gb|AY074315.1| Arabidopsis thaliana unknown protein (At1g77270) mRNA, complete cds
          Length = 2479

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 384 gaggaagccgaagaagtctg 403
           ||||||||||||||||||||
Sbjct: 260 gaggaagccgaagaagtctg 279
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>ref|NM_001031196.1| Gallus gallus LOC423249 (LOC423249), mRNA
          Length = 1883

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cagccggcggcgcgcggcag 103
           ||||||||||||||||||||
Sbjct: 494 cagccggcggcgcgcggcag 513
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>gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, complete sequence
          Length = 246033

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 443    aggagattgcagtggatgaagtgc 466
              ||||| ||||||||||||||||||
Sbjct: 129997 aggagtttgcagtggatgaagtgc 130020
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>emb|AL390354.1|NCB24M22 Neurospora crassa DNA linkage group II BAC contig B24M22
          Length = 90558

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 442   aaggagattgcagtggatgaagtg 465
             ||||||||||||| ||||||||||
Sbjct: 77031 aaggagattgcagcggatgaagtg 77054
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>emb|AJ719363.1| Gallus gallus mRNA for hypothetical protein, clone 1k4
          Length = 1883

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cagccggcggcgcgcggcag 103
           ||||||||||||||||||||
Sbjct: 494 cagccggcggcgcgcggcag 513
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>gb|DQ116388.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
           complete cds
          Length = 2070

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 gaggagcaagcgggaggcgg 198
           ||||||||||||||||||||
Sbjct: 249 gaggagcaagcgggaggcgg 268
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>ref|NM_014869.3| Homo sapiens IQ motif and Sec7 domain 1 (IQSEC1), mRNA
          Length = 4414

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccgctgctcctgccgctcca 169
            ||||||||||||||||||||
Sbjct: 1122 ccgctgctcctgccgctcca 1103
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>dbj|AK221395.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL25-45-L07
          Length = 2528

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 384 gaggaagccgaagaagtctg 403
           ||||||||||||||||||||
Sbjct: 258 gaggaagccgaagaagtctg 277
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>ref|NM_001029094.2| Caenorhabditis elegans Y58G8A.4b (Y58G8A.4) mRNA, complete cds
          Length = 1537

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 tatctaaggagattgcagtg 456
           ||||||||||||||||||||
Sbjct: 469 tatctaaggagattgcagtg 450
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>ref|NM_001029093.2| Caenorhabditis elegans Y58G8A.4a (Y58G8A.4) mRNA, complete cds
          Length = 1484

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 tatctaaggagattgcagtg 456
           ||||||||||||||||||||
Sbjct: 469 tatctaaggagattgcagtg 450
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>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ccgctgctcctgccgctcca 169
             ||||||||||||||||||||
Sbjct: 88431 ccgctgctcctgccgctcca 88412
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 179      gaggagcaagcgggaggcgg 198
                ||||||||||||||||||||
Sbjct: 31006935 gaggagcaagcgggaggcgg 31006916
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>gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, complete sequence
          Length = 230426

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    accgctgctcctgccgctcc 168
              ||||||||||||||||||||
Sbjct: 156732 accgctgctcctgccgctcc 156751
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>gb|AC110619.3| Homo sapiens BAC clone RP11-649N20 from 2, complete sequence
          Length = 161830

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    ctgtcatccaagacgccacc 290
              ||||||||||||||||||||
Sbjct: 109822 ctgtcatccaagacgccacc 109803
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>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence
          Length = 196044

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ccgctgctcctgccgctcca 169
              ||||||||||||||||||||
Sbjct: 141436 ccgctgctcctgccgctcca 141417
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>gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B18 map 3p, complete sequence
          Length = 178548

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ccgctgctcctgccgctcca 169
              ||||||||||||||||||||
Sbjct: 169817 ccgctgctcctgccgctcca 169798
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   gaggagcaagcgggaggcgg 198
             ||||||||||||||||||||
Sbjct: 63914 gaggagcaagcgggaggcgg 63895
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>gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, complete sequence
          Length = 159856

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  accgctgctcctgccgctcc 168
            ||||||||||||||||||||
Sbjct: 2291 accgctgctcctgccgctcc 2272
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>gb|AY884165.1| Oryza sativa (japonica cultivar-group) hexokinase 2 (HXK2) mRNA,
           complete cds
          Length = 1955

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 gaggagcaagcgggaggcgg 198
           ||||||||||||||||||||
Sbjct: 126 gaggagcaagcgggaggcgg 145
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>gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete
             sequence
          Length = 83822

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   gaggaagccgaagaagtctg 403
             ||||||||||||||||||||
Sbjct: 56868 gaggaagccgaagaagtctg 56887
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>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 209876

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   ccgctgctcctgccgctcca 169
             ||||||||||||||||||||
Sbjct: 68449 ccgctgctcctgccgctcca 68468
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>dbj|AB018306.1| Homo sapiens mRNA for KIAA0763 protein, partial cds
          Length = 4148

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 ccgctgctcctgccgctcca 169
           ||||||||||||||||||||
Sbjct: 853 ccgctgctcctgccgctcca 834
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>dbj|AK065656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039E17, full
           insert sequence
          Length = 2156

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 gaggagcaagcgggaggcgg 198
           ||||||||||||||||||||
Sbjct: 279 gaggagcaagcgggaggcgg 298
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>gb|M59250.1|HUMCOX5B Homo sapiens cytochrome c oxidase subunit Vb (COX5B) gene, complete
           cds
          Length = 2593

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 accgctgctcctgccgctcc 168
           ||||||||||||||||||||
Sbjct: 307 accgctgctcctgccgctcc 326
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>gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p, complete sequence
          Length = 229408

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ccgctgctcctgccgctcca 169
              ||||||||||||||||||||
Sbjct: 222133 ccgctgctcctgccgctcca 222114
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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ccgctgctcctgccgctcca 169
             ||||||||||||||||||||
Sbjct: 24048 ccgctgctcctgccgctcca 24029


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,283,569
Number of Sequences: 3902068
Number of extensions: 4283569
Number of successful extensions: 89474
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89104
Number of HSP's gapped (non-prelim): 367
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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