ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
15NG4_PINTA (Q6J163) Auxin-induced protein 5NG4 156 4e-38
2MRAY_CORGL (Q8NNN2) Phospho-N-acetylmuramoyl-pentapeptide-transf... 32 0.82
3NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076) 31 1.8
4LGT_HELHP (Q7VIU4) Prolipoprotein diacylglyceryl transferase (EC... 31 2.4
5CP51_YEAST (P10614) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (... 29 9.1

>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4|
          Length = 410

 Score =  156 bits (394), Expect = 4e-38
 Identities = 81/130 (62%), Positives = 100/130 (76%)
 Frame = +1

Query: 139 EKVKLFMGVLALQFLLAGFHIVSRAALNMGISRLVFIVYRNVISLALLAPFAYFLEKKDR 318
           E+VKL   +LALQF  AGFHIVSRAALNMG+S++VF VYRN+++L L+ P AYFLEKK+R
Sbjct: 15  ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query: 319 PPLTLSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQNMVPAITFVLAAVLRLEQ 498
           P LTLS L +FF+LAL GIT       L +    PT+ASAIQN VPAITF++AA LRLE+
Sbjct: 75  PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEK 134

Query: 499 VDLGRRHGVA 528
           V + RR G+A
Sbjct: 135 VHISRRDGLA 144



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>MRAY_CORGL (Q8NNN2) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 366

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
 Frame = +1

Query: 148 KLFMG---VLALQFLLAGFHIVSRAALNMGISRLVFIVYRNVISLAL------------- 279
           K+FMG    LAL  L+AG  +VSR  L M I   +F++   + S+A+             
Sbjct: 261 KIFMGDTGSLALGGLVAGISVVSRTELLMVIIGALFVI--EIASVAIQIGVFKTRGKRVF 318

Query: 280 -LAPFAYFLEKKDRPPLTLSLLAEFFVLALIGITANQGFYLLGLYHLS 420
            +AP  +  E       T+++   F+++A++ + A  G +     HL+
Sbjct: 319 KMAPIHHHFEALGWAETTVTI--RFWLIAIMAVLAGVGVFYSDWLHLA 364



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>NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076)|
          Length = 276

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 525 HPVPPAQVHLLQPEHRGQHEGDGRHH 448
           HP PPAQ+H    +H+  H+G G HH
Sbjct: 185 HPFPPAQLHGGAADHK--HDGAGGHH 208



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>LGT_HELHP (Q7VIU4) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 292

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 247 IVYRNVISLALLAPFAYFLEKKDRPPLTLSLLAEFFVLALIGI 375
           I+Y + + +ALL   A+   + +R P+T  LL  FF+   IG+
Sbjct: 31  IMYVSAMLIALLIAKAFITYRNERFPITQELLDSFFIWVEIGV 73



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>CP51_YEAST (P10614) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1)|
           (Sterol 14-alpha demethylase) (Lanosterol 14-alpha
           demethylase) (P450-14DM)
          Length = 530

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
 Frame = +1

Query: 217 LNMGISRLVFIVYRNVISLALLAPFAY-------FLEKKDRPPL 327
           +N+G+S  + +     ISL ++ PF Y       +  +KDRPPL
Sbjct: 15  VNIGLSHFLALPLAQRISLIIIIPFIYNIVWQLLYSLRKDRPPL 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,898,905
Number of Sequences: 219361
Number of extensions: 632105
Number of successful extensions: 2118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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