ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart29d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CB021_MOUSE (Q8BLN6) Protein C2orf21 homolog 30 4.0
2ALR_FUSNN (Q8RGA2) Alanine racemase (EC 5.1.1.1) 30 4.0
3IAA1_WHEAT (P01085) Alpha-amylase inhibitor 0.19 (0.19 AI) (0.19... 30 5.3

>CB021_MOUSE (Q8BLN6) Protein C2orf21 homolog|
          Length = 394

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 579 LAAEHXHQKATISNTHQLQSCSGCSQDTTQVTHGQSLSRLLFALYQCEATQY 424
           L ++    KATIS  HQ  S  G     T    G S SR    +  C+ ++Y
Sbjct: 276 LQSDSISPKATISGCHQGNSFDGSLSSQTSQERGPSHSRASLVIPPCQRSRY 327



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>ALR_FUSNN (Q8RGA2) Alanine racemase (EC 5.1.1.1)|
          Length = 354

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 435 LRTDTRRTAVGLDFD--RESLEWCLENNLSKIGADGYSRLLLFDGNVLQ 575
           L+ DT  T +G + D   + +E+C  NNL+ +G   +S L   DGN ++
Sbjct: 119 LKFDTGMTRLGFEVDDAEKVIEYCKNNNLNLVGI--FSHLSDSDGNTIE 165



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>IAA1_WHEAT (P01085) Alpha-amylase inhibitor 0.19 (0.19 AI) (0.19 alpha-AI)|
          Length = 124

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 281 AFQVPPVPAFRAVAK---RGHQLPAEVLSDVCRR 373
           AFQVP +PA R + +    G Q+P  VL D C++
Sbjct: 11  AFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQ 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,492,553
Number of Sequences: 219361
Number of extensions: 1000500
Number of successful extensions: 3382
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3381
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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