ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29d01 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 79.7 bits (195), Expect = 5e-15 Identities = 49/160 (30%), Positives = 74/160 (46%) Frame = +3 Query: 78 TDAELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQ 257 TD LL AQ +LW + ++ SM L+ AI L I AIH GG SL +++ + L S+ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 258 PFLGRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVL 437 L RLMRVL T+ VF +++L P+SR+L+ +QT Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIG---SQSSQLAQTPLAA 125 Query: 438 AATSPFYTEAALGLADWFRKDVTGPAVPSPFEDVHGASLF 557 P L WF+ ++ P + F+ HG ++ Sbjct: 126 MVLDPTIVSPFSELGAWFQHELPDPCI---FKHTHGRGIW 162
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 66.2 bits (160), Expect = 6e-11 Identities = 42/138 (30%), Positives = 63/138 (45%) Frame = +3 Query: 87 ELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFL 266 +LLQAQA +W H + SM L+CAI+LGIP +H+ +L L+ A+ + K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 267 GRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAAT 446 RLMR LV S F + L P SR+L+ G + V Sbjct: 74 QRLMRALVNSNFF-----IEENSNNQEVCYWLTPASRLLLKGA-----PLTVAPLVQVVL 123 Query: 447 SPFYTEAALGLADWFRKD 500 P +T +++WF+ + Sbjct: 124 DPTFTNPWHYMSEWFKHE 141
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 62.0 bits (149), Expect = 1e-09 Identities = 40/135 (29%), Positives = 61/135 (45%) Frame = +3 Query: 87 ELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFL 266 +LLQAQ +W H + SM L+CAI+LGIP +H+ G +L L+ ++ + K Sbjct: 14 QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCF 73 Query: 267 GRLMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAAT 446 RLMR LV S F + L P S +L+ + + T V Sbjct: 74 QRLMRALVNSNFF----IEENNSNNQEVCYWLTPASCLLL-----KEAPLTVTPLVQVVL 124 Query: 447 SPFYTEAALGLADWF 491 P +T +++WF Sbjct: 125 DPTFTNPWHHMSEWF 139
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 57.0 bits (136), Expect = 4e-08 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +3 Query: 84 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPF 263 +E+ +AQA L++H ++ SM L+ A+ + IP IH G SL NL++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 264 LGRLMRVLVTSGVF 305 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = +3 Query: 84 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPF 263 +E+ +AQA L++H ++ SM L+ A+++ IP I G SL NL++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 264 LGRLMRVLVTSGVF 305 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = +3 Query: 84 AELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPF 263 +E+ +AQA L++H ++ SM L+ A+++ IP I G SL NL++ L +P+SK Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 264 LGRLMRVLVTSGVF 305 + RLMR L +G F Sbjct: 71 VRRLMRYLAHNGFF 84
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 48.1 bits (113), Expect = 2e-05 Identities = 35/120 (29%), Positives = 52/120 (43%) Frame = +3 Query: 93 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGR 272 ++AQA +W+H + ++ LR + LGIP IH G VT L L+ L L ++ Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNGPVT-LSQLVTHLPLKSTSIDRFHH 71 Query: 273 LMRVLVTSGVFXXXXXXXXXXXXXXXLFSLNPLSRILVDGVVGHDEHHSQTSFVLAATSP 452 MR LV +F + L P S++LV H S +V+ T P Sbjct: 72 FMRYLVHMQLFTISTDQITKEDK----YELTPASKLLV-----HGHQKSLAPYVMLQTHP 122
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 39.7 bits (91), Expect = 0.006 Identities = 23/71 (32%), Positives = 35/71 (49%) Frame = +3 Query: 93 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGR 272 L +QA LW + S+ L+CA++L + IH G +L L + L + L R Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYR 67 Query: 273 LMRVLVTSGVF 305 +MR LV +F Sbjct: 68 VMRYLVHMKLF 78
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 38.5 bits (88), Expect = 0.013 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = -3 Query: 553 SDAPCTSSNGDGTAGPVTSFLNQSAS-PSAASV*KGDVAASTKDVWLWCSSWPTTPSTRM 377 S AP TSS + ++ PVTS +S+S P +S + A T S+ TPS+ Sbjct: 406 SSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 465 Query: 376 RDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRI 275 +S +S ++ S P+P P++ T + +S + Sbjct: 466 TESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPV 500 Score = 36.6 bits (83), Expect = 0.049 Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 8/137 (5%) Frame = -3 Query: 553 SDAPCTSSNGDGTAGPVTSFLNQSAS-----PSAASV*KGDVAAST-KDVWLWCSSWPT- 395 S AP TSS + ++ PVTS +S+S PS+++ T SS P Sbjct: 679 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVP 738 Query: 394 TPSTRMRDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKF 218 TPS+ +S +S ++ S P+P P++ T + +S + P + S SA + Sbjct: 739 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSS--TTESSSAPVPT 796 Query: 217 GSEVTPPRRWMAVGMPS 167 S T V PS Sbjct: 797 PSSSTTESSVAPVPTPS 813 Score = 35.8 bits (81), Expect = 0.084 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Frame = -3 Query: 553 SDAPCTSSNGDGTAGPVTSFLNQSAS---PSAASV*KGDVAASTKDVWLWCSSWPT-TPS 386 S AP TSS + ++ PVTS +S+S P+ +S +A SS P TPS Sbjct: 430 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPS 489 Query: 385 TRMRDSGLRLKSSPASDPDSEPLP-PAAKTPDVTSTRIRRP 266 + +S +S ++ S P+P P++ T + +S P Sbjct: 490 SSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTP 530 Score = 32.0 bits (71), Expect = 1.2 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 9/100 (9%) Frame = -3 Query: 553 SDAPCTSSNGDGTAGPVTSFLNQSAS---PSAASV*KGDVAASTKDVWLWCSSWPTTPST 383 S AP TSS + ++ PVTS +S+S P+ +S +A SS P T ST Sbjct: 367 SSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSST 426 Query: 382 R------MRDSGLRLKSSPASDPDSEPLPPAAKTPDVTST 281 + S S+P + +E TP ++T Sbjct: 427 TESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTT 466
>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3| Length = 944 Score = 36.2 bits (82), Expect = 0.064 Identities = 29/92 (31%), Positives = 47/92 (51%) Frame = -3 Query: 553 SDAPCTSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMR 374 +++P + + ++ +T L +A+P+A S AST + + S+ P P+TR+ Sbjct: 793 AESPRPARSSPASSPELTPALEATAAPAAPS------GASTTRMQIGSSTEP--PTTRLA 844 Query: 373 DSGLRLKSSPASDPDSEPLPPAAKTPDVTSTR 278 +G R SPAS P P PP+A P TR Sbjct: 845 AAG-RSVQSPASTPPPTPTPPSA--PSAGQTR 873
>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)| Length = 1186 Score = 34.3 bits (77), Expect = 0.24 Identities = 31/116 (26%), Positives = 46/116 (39%) Frame = -3 Query: 550 DAPCTSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRD 371 D TS++G T+G AS S+AS K D A+S W W + R Sbjct: 1044 DGSVTSTDGSSTSG--------GASSSSASTAKSDAASSEDGFWWW--------NRRKSG 1087 Query: 370 SGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVT 203 SG + + +S D A+ T +ST +G S S++ GS + Sbjct: 1088 SGHKSATVQSSTTDKTSTDSASSTDSTSST------SGASTTTSGSSSTSGGSSTS 1137
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 34.3 bits (77), Expect = 0.24 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +3 Query: 93 LQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGR 272 ++AQA +W+ + S+ LRCA++LGI I +L +L + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 273 LMRVLV 290 ++R LV Sbjct: 72 ILRYLV 77
>GLYA1_RHOPA (Q6N693) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine| methylase 1) (SHMT 1) Length = 432 Score = 32.3 bits (72), Expect = 0.92 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 328 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 + P+P A T T +R PR G +L ++ A KF S + P Sbjct: 225 ASPVPHAHVTTTTTHKSLRGPRGGLILTNDEALAKKFNSAIFP 267
>GLYA_NITWN (Q3SRV3) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 433 Score = 32.3 bits (72), Expect = 0.92 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -3 Query: 328 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 + P+P A T T +R PR G +L ++ A KF S + P Sbjct: 226 ASPVPHAHVTTTTTHKSLRGPRGGLILCNDEALAKKFNSAIFP 268
>IRX1_HUMAN (P78414) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 400 PTTPSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRP 266 P PS RD G L ++ P PL A + P+ STR+ P Sbjct: 255 PAAPSALARDQGSPLAAADVLKPQDSPLGLAKEAPEPGSTRLLSP 299
>DNAJ_METCA (Q607A6) Chaperone protein dnaJ| Length = 377 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +3 Query: 117 RHSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNL--MAALSLPASKQPFLGRLMRV 284 +H ++ L C + +G PTA LGG +P L L +PA Q GRL RV Sbjct: 254 QHPIFTRDGADLYCEVPIGFPTAC--LGGELEVPTLDGKVVLKIPAETQ--TGRLFRV 307
>CSD_MYCPA (Q9KII6) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 685 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = -3 Query: 484 SASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDS--GLRLKSSPASDPDSEPLPP 311 SA + A+ G AA T DV+ SSW P + D G + P + P S P P Sbjct: 124 SAPDATAATSAGRAAAGTSDVY---SSW--VPQLGVADIYLGAPTPAGPEAPPQSAPPAP 178 Query: 310 AAKTPDVTS 284 + PD T+ Sbjct: 179 RGQVPDTTA 187
>GLYA_STRA5 (Q8DZM7) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>GLYA_STRA3 (Q8E5C6) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>GLYA_STRA1 (Q3K122) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 418 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T T +R PR G +L ++ A K S V P Sbjct: 210 ASGHHPSPIPYAHVTTTTTHKTLRGPRGGLILTNDEAIAKKINSAVFP 257
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 31.2 bits (69), Expect = 2.1 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 6/139 (4%) Frame = -3 Query: 556 KSDAPCTSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRM 377 KSD P T S P S + A ++ +V K DV A+ + P+ M Sbjct: 454 KSDVPATESAPVPEMTPAGSQPSIPAGETSPAVPKSDVPAT-----------ESAPAPEM 502 Query: 376 RDSGLRLK------SSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFG 215 +G K S+PA++P P+ P ++ P++ L S+++ I G Sbjct: 503 TPAGTETKPAAPKSSAPATEP--SPVAPGTESAPAGPGASSSPKSSVL--ASETSPIAPG 558 Query: 214 SEVTPPRRWMAVGMPSLMA 158 +E P A+ +P A Sbjct: 559 AETAPAGSSGAITIPESSA 577
>DNAJ_NEIMB (P63969) Chaperone protein dnaJ| Length = 373 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 120 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGRLMRV 284 H ++ + L C + + TA LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHCELPISFATAA--LGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>DNAJ_NEIMA (P63968) Chaperone protein dnaJ| Length = 373 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +3 Query: 120 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGRLMRV 284 H ++ + L C + + TA LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHCELPISFATAA--LGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = -3 Query: 502 TSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSE 323 TS + + S S ++ ST + +S T+ ++ + S + SSP+S S Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLST 359 Query: 322 PLPPAAKTPDVTSTRIRRPRN 260 +P TP++TST P N Sbjct: 360 SIPTTT-TPEITSTLSSLPDN 379
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -2 Query: 302 DTRRDQHTH*AAEEWLLARRKRQRGHQV-RQRGDPAEAVDGRRDAELDGAAEPHGREV 132 + +R + AE +R+RQRG + RQRG AE G R+AE GREV Sbjct: 100 ERQRGREAEREAERQRERQRERQRGREAERQRGREAERQRG-REAEKQRGERQRGREV 156
>PKNE_MYCTU (P72001) Serine/threonine-protein kinase pknE (EC 2.7.11.1)| Length = 566 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 162 WRSGAPWT*GSRGCGATGPPVPAAARHPW 76 W PW G+ G P+P +AR PW Sbjct: 309 WPQPTPWAGGAPPWGPPSSPLPRSARQPW 337
>PKNE_MYCBO (Q7TZN3) Serine/threonine-protein kinase pknE (EC 2.7.11.1)| Length = 566 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 162 WRSGAPWT*GSRGCGATGPPVPAAARHPW 76 W PW G+ G P+P +AR PW Sbjct: 309 WPQPTPWAGGAPPWGPPSSPLPRSARQPW 337
>TOB1_MOUSE (Q61471) Tob1 protein (Transducer of erbB-2 1)| Length = 363 Score = 30.4 bits (67), Expect = 3.5 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = -3 Query: 352 SSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTPPRRWMAVGM 173 S PAS S P PP + V+ T + R + AA KFGS + G Sbjct: 143 SDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGS-----TKMKNSGR 197 Query: 172 PSLMAQRSPMDV 137 S +A+ SP+++ Sbjct: 198 SSKVARTSPINL 209
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 30.4 bits (67), Expect = 3.5 Identities = 23/78 (29%), Positives = 34/78 (43%) Frame = -3 Query: 538 TSSNGDGTAGPVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLR 359 T S D +A TS + S S + +S G AAS+ SS P++ + S Sbjct: 423 TGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA 482 Query: 358 LKSSPASDPDSEPLPPAA 305 SSP+S S P ++ Sbjct: 483 ASSSPSSSASSSSSPSSS 500
>MYC_FLVTT (P21438) Viral myc transforming protein (v-Myc)| Length = 437 Score = 30.4 bits (67), Expect = 3.5 Identities = 29/99 (29%), Positives = 41/99 (41%) Frame = -3 Query: 493 LNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSEPLP 314 LN S+SP + D AA + SS ++P + GL ++ P + DSE Sbjct: 199 LNDSSSPKPCA--SPDSAAFSPSSDSLLSSAESSPRASPKPLGLHEETPPTTSSDSEEEQ 256 Query: 313 PAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTPP 197 + DV S R+P +GS SA G PP Sbjct: 257 EEEEEIDVVSVEKRQPPAKRSESGSPSA----GGHSKPP 291
>GLYA_STRT2 (Q5M4W1) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T T +R PR G +L + A K S V P Sbjct: 210 ASGHHPSPVPYAHVTTTTTHKTLRGPRGGLILTDDEDIAKKLNSAVFP 257
>GLYA_STRT1 (Q5M0B4) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T T +R PR G +L + A K S V P Sbjct: 210 ASGHHPSPVPYAHVTTTTTHKTLRGPRGGLILTDDEDIAKKLNSAVFP 257
>CDX2_MOUSE (P43241) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 311 Score = 30.0 bits (66), Expect = 4.6 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +2 Query: 62 DHGGPHGCRAAAGTGG---PVAPQPLLPHVHGAPLRHQAXXXXXXXXXXXXXLAAELDGR 232 D+GG H AAA T +P P P +GAPLR +A L+G Sbjct: 39 DYGGYHVAAAAAATANLDSAQSPGPSWPTAYGAPLREDWNGYAPGGAAAANAVAHGLNGG 98 Query: 233 AVAS 244 + A+ Sbjct: 99 SPAA 102
>GLYA_BRAJA (P24060) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 432 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 328 SEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 + P+P A T T +R PR G +L+ ++ A K S + P Sbjct: 225 ASPVPYAHVTTTTTHKSLRGPRGGLILSNDETLAKKLNSAIFP 267
>TOB1_RAT (Q8R5K6) Tob1 protein (Transducer of erbB-2 1)| Length = 365 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = -3 Query: 352 SSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTPPRRWMAVGM 173 S PAS S P PP + V+ T + R + AA KFGS + G Sbjct: 143 SDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGS-----TKMKNSGR 197 Query: 172 PSLMAQRSPMDV 137 S +A+ SP+ + Sbjct: 198 SSKVARTSPISL 209
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 432 VLAATSPFYTEAALGLADWFRKDVTGPAVPSP 527 VLAA+SPF+ EA L A TG A P+P Sbjct: 47 VLAASSPFFREALLTSAPLPLPPATGGAAPNP 78
>LRC21_MOUSE (Q8K099) Leucine-rich repeat-containing protein 21 precursor| (Photoreceptor-associated LRR superfamily protein) (Retina-specific protein PAL) Length = 618 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -3 Query: 421 WLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRR 269 W +C S + S R+ G + ++ SDPD LPPA+ PD R+ R Sbjct: 14 WGFCPS-ECSCSLRILSDGSKARTVVCSDPDLT-LPPASIPPDTCKLRLER 62
>DNAJ_NEIG1 (Q5F5M1) Chaperone protein dnaJ| Length = 373 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +3 Query: 120 HSLYYLTSMGLRCAIKLGIPTAIHRLGGVTSLPNLMAALSLPASKQPFLGRLMRV 284 H ++ + L C +L I A+ LGG +P L + L K+ GR MRV Sbjct: 256 HKIFQRDGLDLHC--ELPISFAMAALGGELEVPTLDGKVKLTVPKETQTGRRMRV 308
>GLYA_METEX (P50435) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 434 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -3 Query: 322 PLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 P P A T +R PR G +L ++ A KF S + P Sbjct: 229 PFPHAHVATTTTHKTLRGPRGGMILTNDEALAKKFNSAIFP 269
>TOB1_HUMAN (P50616) Tob1 protein (Transducer of erbB-2 1)| Length = 345 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/72 (29%), Positives = 32/72 (44%) Frame = -3 Query: 352 SSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTPPRRWMAVGM 173 S PAS S P PP + V+ T + R + AA KFGS + G Sbjct: 143 SDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGS-----TKMKNSGR 197 Query: 172 PSLMAQRSPMDV 137 + +A+ SP+++ Sbjct: 198 SNKVARTSPINL 209
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 29.3 bits (64), Expect = 7.8 Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 10/100 (10%) Frame = -3 Query: 409 SSWPTTPSTRMRDSGLRLKSSPAS--DPDSEPLPPAAKTPDVT-----STRIRRPRNGCL 251 S WP+ PS +RD +L++S S E LP PD T S R+ P + Sbjct: 29 SHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFRVTIPTD--- 85 Query: 250 LAGSDSAAIKF---GSEVTPPRRWMAVGMPSLMAQRSPMD 140 L GS IK G EV P W+ S + P+D Sbjct: 86 LIGSSGEVIKVSTAGKEVLP--SWLHWDPQSHTLEGLPLD 123
>CCNE_DROME (P54733) G1/S-specific cyclin-E (DmCycE)| Length = 709 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = -3 Query: 508 PVTSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPD 329 P+ S SAS + G AAS D C S ST +G + K +SD + Sbjct: 59 PIPSTSFSSASQRSEEELPGTSAASRTDEMCSCDSQNLAASTAATSNGNKRKRRLSSDSN 118 Query: 328 SEP----LPPAAK 302 +P PP+AK Sbjct: 119 EDPELGFEPPSAK 131
>GLYA_STRMU (Q8DU67) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 420 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -3 Query: 322 PLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 PLP A T T +R PR G +L + A K S + P Sbjct: 217 PLPYAHITTTTTHKTLRGPRGGLVLTNDEDLAKKINSAIFP 257
>HUTI_AGRRH (Q9KWE5) Imidazolonepropionase (EC 3.5.2.7)| (Imidazolone-5-propionate hydrolase) Length = 407 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -3 Query: 391 PSTRMRDSGLRLKSSPASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFG 215 P +RD+G+R+ + +P + PL T ++++T R C+ + AA G Sbjct: 301 PIQTLRDAGVRMAIATDCNPGTSPLTSLLLTMNMSATLFRLTVEECICGATREAARALG 359
>GLYA_ENTFA (Q831F9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 412 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 343 ASDPDSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEVTP 200 AS P+P A T +R PR G +L S+ A K S + P Sbjct: 205 ASGLHPNPVPYADIVTSTTHKTLRGPRGGLILTNSEELAKKVNSSIFP 252
>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)| Length = 1980 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -3 Query: 331 DSEPLPPAAKTPDVTSTRIRRPRNGCLLAGSDSAAIKFGSEV 206 DS+PL PD R+ RPR G L + K EV Sbjct: 311 DSDPLSRGDHPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEV 352 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,564,990 Number of Sequences: 219361 Number of extensions: 1221795 Number of successful extensions: 6253 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 5619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6233 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
