Clone Information

BLAST Search Result

Clone Name	bart29c12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VNUA_PRVKA (P33485) Probable nuclear antigen	39	0.014
2	DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-re...	37	0.031
3	DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re...	35	0.15
4	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	35	0.20
5	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	34	0.26
6	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	34	0.26
7	TEGU_EHV1B (P28955) Large tegument protein	34	0.34
8	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	33	0.44
9	PRP8_YEAST (P33334) Pre-mRNA-splicing factor 8	33	0.58
10	VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like prote...	33	0.75
11	DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re...	32	1.3
12	MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosi...	32	1.3
13	LAS17_YEAST (Q12446) Proline-rich protein LAS17	32	1.3
14	RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X ...	32	1.3
15	VMSA_HHBV (P13847) Major surface antigen precursor	32	1.7
16	BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 ...	32	1.7
17	POU1_XENLA (P31363) Transcription factor POU1 (XLPOU1) (Homeotic...	32	1.7
18	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	32	1.7
19	FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity ...	32	1.7
20	FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)	32	1.7
21	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	32	1.7
22	LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage prote...	31	2.2
23	FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)	31	2.2
24	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	31	2.2
25	WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem...	31	2.2
26	Y462_MYCPN (P75321) Hypothetical protein MPN462 (H08_orf270)	31	2.9
27	VRP1_YEAST (P37370) Verprolin	31	2.9
28	SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-a...	31	2.9
29	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	30	3.7
30	SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Fo...	30	3.7
31	GP128_MOUSE (Q8BM96) Probable G-protein coupled receptor 128 pre...	30	3.7
32	ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote...	30	3.7
33	SMG_DROME (Q23972) Protein Smaug	30	3.7
34	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	30	3.7
35	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	30	3.7
36	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	30	4.9
37	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	30	4.9
38	RPTN_MOUSE (P97347) Repetin	30	4.9
39	SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains pro...	30	6.4
40	RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology doma...	30	6.4
41	SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-a...	30	6.4
42	BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeo...	30	6.4
43	VL2_HPV2A (P25487) Minor capsid protein L2	30	6.4
44	PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20	30	6.4
45	COVA1_MOUSE (Q8R0Z2) Tumor-associated hydroquinone oxidase (tNOX...	30	6.4
46	EXPA_DROME (Q07436) Protein expanded	30	6.4
47	ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6) (E...	30	6.4
48	CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity fa...	30	6.4
49	CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity fa...	30	6.4
50	COVA1_HUMAN (Q16206) Tumor-associated hydroquinone oxidase (tNOX...	30	6.4
51	Y066_NPVLD (P30325) Hypothetical protein in POL 5'region (Fragment)	30	6.4
52	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	29	8.3
53	INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)	29	8.3
54	HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)	29	8.3
55	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	29	8.3
56	SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially...	29	8.3
57	PTC1_BRARE (Q98864) Protein patched homolog 1 (Patched 1) (PTC1)	29	8.3
58	RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X re...	29	8.3
59	INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase...	29	8.3
60	FMN2_MOUSE (Q9JL04) Formin-2	29	8.3

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 33/109 (30%), Positives = 37/109 (33%), Gaps = 1/109 (0%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PPS    HH  P     P          P        P PPP    +    H G  STRP
Sbjct: 149 PPSAKTHHHQDPPGGGPPSTSSHHHHQDP---PGGGPPSPPPRPSTSSSSSHQGPPSTRP 205

Query: 249 PPPPRHGLNHRPHQAGSKGIFKGGI*RT-QTLLSPEANSWWKKQPWGQG 392
           PPP R      P         + G   T QTL S   N  +   P G+G
Sbjct: 206 PPPQRPPPRWPPPSPQKISETRAGSENTAQTLFSHSENKLF-SHPMGEG 253

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>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1)
          Length = 1248

 Score = 37.4 bits (85), Expect = 0.031
 Identities = 28/70 (40%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGI---RPLLPTAASVPWPPPSLKATHHRIHSGVDS 239
           PP LPGS  + P  P LP       GI    P LP  A +P PPP L         G+  
Sbjct: 657 PPPLPGSARIPPPPPPLP----GSAGIPPPPPPLPGEAGMPPPPPPLPG-----GPGI-- 705

Query: 240 TRPPPPPRHG 269
             PPPPP  G
Sbjct: 706 --PPPPPFPG 713



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
 Frame = +3

Query: 63  TFPPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGV--- 233
           T PPS+P S    P +P LP          P  P  ++ P PPP        +  G    
Sbjct: 562 TVPPSVP-SRAPVPPAPPLPGDSGTIIPPPPA-PGDSTTPPPPPPPPPPPPPLPGGTAIS 619

Query: 234 -------DSTRPPPPP 260
                  D+T PPPPP
Sbjct: 620 PPPPLSGDATIPPPPP 635

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>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 27/72 (37%), Positives = 29/72 (40%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP LPG   + P  P LP          P LP  AS+P PPP   AT            P
Sbjct: 614 PPPLPGGACIPP-PPQLPGSAAIPPP--PPLPGVASIPPPPPLPGAT----------AIP 660

Query: 249 PPPPRHGLNHRP 284
           PPPP  G    P
Sbjct: 661 PPPPLPGATAIP 672



 Score = 33.5 bits (75), Expect = 0.44
 Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGI--RPLLPTAASVPWPPPSLKATHHRIHSGVDST 242
           PP LPG   + P  P LP       G+   P LP    +P PPP           G+   
Sbjct: 674 PPPLPGGTGIPPPPPPLP----GSVGVPPPPPLPGGPGLPPPPPPFPGA-----PGI--- 721

Query: 243 RPPPPPRHGLNHRP 284
            PPPPP  G+   P
Sbjct: 722 -PPPPPGMGVPPPP 734

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 18/72 (25%), Positives = 28/72 (38%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP  P S+      P  P        + P + + +  P PPPS + +   + +      P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313

Query: 249 PPPPRHGLNHRP 284
           PPPP      +P
Sbjct: 314 PPPPSRRNRGKP 325

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLS----PTLPHXXXXXXGIRPLLPTAA-SVPWPPPSLKATHHRIHS-- 227
           PPS PG   L P S    P LP          P LP+   S P PPP  +     +    
Sbjct: 304 PPSRPGPPPLPPASNDEIPRLPQRNLSLTSSAPPLPSPGRSGPLPPPPSERPPPPVRDPP 363

Query: 228 GVDSTRPPPPP 260
           G     PPPPP
Sbjct: 364 GRSGPLPPPPP 374



 Score = 30.0 bits (66), Expect = 4.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 162 PTAASVPWPPPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPHQ 290
           P+ +S P+P P L  T  R    +D   PPPPP  G     H+
Sbjct: 232 PSGSSSPFPRPPLPPTPSR---ALDDKPPPPPPPVGNRPSMHR 271

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLS----PTLPHXXXXXXGIRPLLPTAA-SVPWPPPSLKATHHRIHS-- 227
           PPS PG   L P S    P LP          P LP+   S P PPP  +     +    
Sbjct: 298 PPSRPGPPPLPPTSSDEIPRLPQRNLSLTSPTPPLPSPGRSGPLPPPPTERPPPPVRDPP 357

Query: 228 GVDSTRPPPPP 260
           G     PPPPP
Sbjct: 358 GRSGPLPPPPP 368

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>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +3

Query: 69   PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
            PPS+P    L P  P          G  P LP       P P L  +  +  SG   T P
Sbjct: 2540 PPSVPAPPTLPPAPPLPQSTSKAASGPPPTLP-------PAPPLPQSTSKAASGPPPTLP 2592

Query: 249  PPPP 260
            P PP
Sbjct: 2593 PAPP 2596



 Score = 30.0 bits (66), Expect = 4.9
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = +3

Query: 63   TFPPS---LPGSHHLAPLS--PTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHS 227
            T PP    LP S   A +S  P   +       + P +P   ++P P P L  +  +  S
Sbjct: 2506 TLPPKAAPLPPSDASAIMSGKPVFKYTPGNKSAVPPSVPAPPTLP-PAPPLPQSTSKAAS 2564

Query: 228  GVDSTRPPPPP 260
            G   T PP PP
Sbjct: 2565 GPPPTLPPAPP 2575

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLS------PTLPHXXXXXXGIRPLLPTAA-SVPWPPPSLKATHHRIHS 227
           PPS PG   L P S      P LP          P LP+   S P PPP  +     +  
Sbjct: 312 PPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD 371

Query: 228 --GVDSTRPPPPP--RHGLNHR 281
             G     PPPPP  R+G   R
Sbjct: 372 PPGRSGPLPPPPPVSRNGSTSR 393

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>PRP8_YEAST (P33334) Pre-mRNA-splicing factor 8|
          Length = 2413

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
 Frame = +3

Query: 69  PPSLPG----SHHLAPLSPTLPHXXXXXXGIRPLLPTAAS----VPWPPPSLKATHHRIH 224
           PP  PG    S    P  P  P          P++P++ +    +P PPP          
Sbjct: 5   PPPPPGFEEDSDLALPPPPPPPPGYEIEELDNPMVPSSVNEDTFLPPPPPPPSNFEINAE 64

Query: 225 SGVDSTRPPPPPRHGLNHRPHQAGSK 302
             VD T PPPPP  GL+    +A  K
Sbjct: 65  EIVDFTLPPPPPPPGLDELETKAEKK 90

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>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)|
           (VITO1 protein)
          Length = 317

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 23/78 (29%), Positives = 31/78 (39%)
 Frame = +3

Query: 63  TFPPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDST 242
           +FP S   S + AP+ P L             LP AA+ P+ P +L   H  +H G    
Sbjct: 140 SFPASFWNSAYQAPVPPPLGSPLATAHSE---LPFAAADPYSPAAL---HGHLHQGATEP 193

Query: 243 RPPPPPRHGLNHRPHQAG 296
                P H   H P+  G
Sbjct: 194 WHHAHPHHAHPHHPYALG 211

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>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/81 (33%), Positives = 31/81 (38%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP LPG+    P  P  P          P  P    VP PPP L         G+    P
Sbjct: 549 PPPLPGAGPCPPPPPPPP----------PPPPLPGVVPPPPPPLPGM-----PGIPP--P 591

Query: 249 PPPPRHGLNHRPHQAGSKGIF 311
           PPPP  G+   P   G  G+F
Sbjct: 592 PPPPLSGVPPPPPPPG--GVF 610

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>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
 Frame = +3

Query: 75   SLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLK-ATHHRIHSG------- 230
            SLPG  + +PL P  P         +P  P     P  P SL+ A   R  SG       
Sbjct: 773  SLPGQGYHSPLGPLSPQLSLRRGPFQPPFPPP---PRRPQSLREAFSLRRASGRLGPPRS 829

Query: 231  --VDSTRPPPPP---RHGLNHR 281
              + S RPP PP   +HG  HR
Sbjct: 830  PVLGSPRPPSPPPLLKHGPRHR 851

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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP+  G   +   +P+ P        I P LP+  S   PPP    T      G  +  P
Sbjct: 473 PPASLGQSQIPQSAPSAP--------IPPTLPSTTSAAPPPPPAFLTQQPQSGGAPA--P 522

Query: 249 PPPPR 263
           PPPP+
Sbjct: 523 PPPPQ 527



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 18/39 (46%), Positives = 19/39 (48%)
 Frame = +3

Query: 153 PLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPPRHG 269
           P LP   + P PPP    T     SGV    PPPPPR G
Sbjct: 314 PQLPNRNNRPVPPPPPMRTTTE-GSGVRLPAPPPPPRRG 351

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>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (MHC class I regulatory element-binding protein
           H-2RIIBP)
          Length = 520

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/65 (33%), Positives = 27/65 (41%)
 Frame = +3

Query: 81  PGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPP 260
           P S  + P SP  P          PL P+A   P PPP L +    I S + S   PPP 
Sbjct: 87  PLSQGIRPSSPPGP----------PLTPSAPPPPMPPPPLGSPFPVISSSMGSPGLPPPA 136

Query: 261 RHGLN 275
             G +
Sbjct: 137 PPGFS 141

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>VMSA_HHBV (P13847) Major surface antigen precursor|
          Length = 335

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP   G    A   PT+ H       +  L    A   WP    + T  R+  G+D  RP
Sbjct: 30  PPEFSGPITTAGKFPTIQHVMDHIDSVEELRTLQAGGHWP----EGTARRL--GLDQPRP 83

Query: 249 PPPP 260
            PPP
Sbjct: 84  TPPP 87

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>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)|
          Length = 1157

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +3

Query: 72  PSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPP-PSLKATHHRIHSGVDSTRP 248
           PS+P    + P+S   P        I P+ PT  + P PP P     H+ +   V S+ P
Sbjct: 725 PSVPPVPPVPPVSSAPP--ALSAPSIPPVPPTPPAPPAPPAPLALPKHNEVEEHVKSSAP 782

Query: 249 PPPPRHGLNHRPHQA 293
            PP     +  P+ A
Sbjct: 783 LPPVSEEYHPMPNTA 797

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>POU1_XENLA (P31363) Transcription factor POU1 (XLPOU1) (Homeotic protein|
           NRL-22/NRL-34)
          Length = 356

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = +3

Query: 84  GSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVP----WPPPSLKATHHRIHS------GV 233
           G HHLAP+SP+           +PL+ + +S         P   + HH +        GV
Sbjct: 102 GGHHLAPMSPS-------SNSHQPLIYSQSSYTNLNGMLGPQASSLHHSMRDPLHDDPGV 154

Query: 234 DSTRPPPPPRHGLNHRPH 287
             T+   PP+H  +H+ H
Sbjct: 155 HDTQVDSPPQHLGHHQDH 172

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 28/95 (29%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATH------HRIHSG 230
           P S PG     P + + P       G  P        P PPP++ +T           SG
Sbjct: 111 PGSAPGVSSAPPPAVSAPPANPPTTGAPP---GPGPTPTPPPAVPSTAPGPPPPSTPSSG 167

Query: 231 VDSTRP-----PPPPRHGLNHRPHQAGSKGIFKGG 320
           V +T P     PPPP  G    P      G  KGG
Sbjct: 168 VSTTPPQTGGPPPPPAGGAGPGPKPGPGPGGPKGG 202

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>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)|
          Length = 1468

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 26/76 (34%), Positives = 29/76 (38%)
 Frame = +3

Query: 69   PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
            PP LP    L PL P  P        I P+ P   S P PPP    T      G     P
Sbjct: 887  PPPLPPG--LGPLPPAPP--------IPPVCPV--SPPPPPPPPPPTPVPPSDGPPPPPP 934

Query: 249  PPPPRHGLNHRPHQAG 296
            PPPP   +   P+  G
Sbjct: 935  PPPPLPNVLALPNSGG 950

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>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 26/76 (34%), Positives = 29/76 (38%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP LP    L PL P  P        I P+ P   S P PPP    T      G     P
Sbjct: 661 PPPLPPG--LGPLPPAPP--------IPPVCPV--SPPPPPPPPPPTPVPPSDGPPPPPP 708

Query: 249 PPPPRHGLNHRPHQAG 296
           PPPP   +   P+  G
Sbjct: 709 PPPPLPNVLALPNSGG 724

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 22/68 (32%), Positives = 27/68 (39%)
 Frame = +3

Query: 81  PGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPP 260
           PG H  AP  P  P       G  P  P+++     PP + +   R    V S RPPP P
Sbjct: 792 PGPHSGAPPVPFRP-------GPLPPFPSSSDSFGAPPQVPSRPTRAPPSVPSRRPPPSP 844

Query: 261 RHGLNHRP 284
                 RP
Sbjct: 845 TRPTIIRP 852

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>LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage protein 10)|
          Length = 982

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
 Frame = +3

Query: 99  APLSPTL------PHXXXXXXGIRPLLPTAASVPW--PPPSLKATHHRIHSGVDST-RPP 251
           APL PT+      P         + +  +AA  P+  PPPS+ +T     SG      PP
Sbjct: 412 APLVPTVSAQQFTPEQLAAAFAQQQIAQSAAPTPFDSPPPSMPSTS----SGPSGALAPP 467

Query: 252 PPPRHGLNHR 281
           PPP H +  R
Sbjct: 468 PPPSHPIPRR 477

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>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/64 (37%), Positives = 25/64 (39%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PPS P      PL+P LP          P LP     P PPP L         G D   P
Sbjct: 558 PPSAP------PLAPPLPGCAEPPPA--PPLPGDLPPPPPPPPL---------GTDGPVP 600

Query: 249 PPPP 260
           PPPP
Sbjct: 601 PPPP 604

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 162 PTAASVPWPPPSLKATH-HRIHSGVDSTRPPPPPRHG 269
           P AA  P PPP     H H  H    +  PP PP HG
Sbjct: 276 PPAAPPPPPPPPHPHPHPHAHHLHAAAAPPPAPPHHG 312

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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = +3

Query: 102 PLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPPRHG 269
           P  P+ P          P  P AA  P PPP L        SG     PPPPP  G
Sbjct: 348 PSPPSFPPHPDFAAPPPPPPPPAADYPMPPPPLSQP-----SGGAPPPPPPPPPPG 398

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>Y462_MYCPN (P75321) Hypothetical protein MPN462 (H08_orf270)|
          Length = 270

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 1   TPDANSKARQGKRREGEEKPAPFHLPSQA 87
           T D ++K +QG R++GE+ PAP  LP +A
Sbjct: 220 TDDTDNK-KQGFRKQGEQSPAPIALPFEA 247

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
 Frame = +3

Query: 90  HHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPP-----PSLKATHHRIHSGVDSTRPPP 254
           +H +P  P LP          P +PT+ + P PP     PSL            +  PPP
Sbjct: 301 NHKSPSQPPLPSSA-------PPIPTSHAPPLPPTAPPPPSLPNVTSAPKKATSAPAPPP 353

Query: 255 PP 260
           PP
Sbjct: 354 PP 355

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>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 464

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/68 (30%), Positives = 25/68 (36%)
 Frame = +3

Query: 63  TFPPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDST 242
           + PP  PG   L P+ PT P       G   L P A  V  P P +      +H      
Sbjct: 250 SLPPPPPGGLPLPPMPPTGP-APSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGV 308

Query: 243 RPPPPPRH 266
            PP P  H
Sbjct: 309 HPPAPGVH 316

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 30/102 (29%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
 Frame = +3

Query: 66  FPPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTR 245
           +PP LP     AP  P  P       G   + P     P PPP                 
Sbjct: 343 YPPPLPALPSSAPSGPPPPPPPLSVSG--SVAPPPPPPPPPPPG---------------- 384

Query: 246 PPPPP---RHGLNHRPHQAGSKGIFKGGI*RTQTLLSPEANS 362
           PPPPP     G +  P  AGSK      I     L   E NS
Sbjct: 385 PPPPPGLPSDGDHQVPTPAGSKAALLDQIREGAQLKKVEQNS 426

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>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression|
            inhibition of growth A)
          Length = 1790

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 26/83 (31%), Positives = 27/83 (32%)
 Frame = +3

Query: 69   PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
            PP+ PG    AP  P  P       G  P  P     P PPP           G     P
Sbjct: 1023 PPAHPGLSGAAPPPPPPPPPPPPGAGAAP--PPPPPPPPPPPG--------GLGGPPPPP 1072

Query: 249  PPPPRHGLNHRPHQAGSKGIFKG 317
            PPPP  G    P      G F G
Sbjct: 1073 PPPPPGGFGGPPPPPPPPGGFGG 1095

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>GP128_MOUSE (Q8BM96) Probable G-protein coupled receptor 128 precursor|
          Length = 785

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 563 LPSLPVQHCLQGRCWKKERCWAFAAAGWLRC 471
           +PS+PVQ C  G  W+  RC        LRC
Sbjct: 44  VPSIPVQFCRNGGTWQNGRCICTEEWKGLRC 74

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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 168 AASVPWPPPSLKATHHRIHSGVDSTRPPPPP---RHGLNHRPHQAGSKGIF 311
           AA+   P P L+  HH          PPPPP   +H   H PH  G+ G F
Sbjct: 317 AAAAAGPGPHLQ--HH-----APPPAPPPPPAPAQHPHQHHPHLPGAAGAF 360

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>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/70 (27%), Positives = 24/70 (34%)
 Frame = +3

Query: 81   PGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPP 260
            P  HH     P LP       G           P   P  K++ +    G    +PPPPP
Sbjct: 828  PLPHHSQQAPPPLPQFDYNGYG---------GGPSHQPQYKSSSYPSFMGNPQQQPPPPP 878

Query: 261  RHGLNHRPHQ 290
                +H P Q
Sbjct: 879  SSKSHHHPQQ 888

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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 24/79 (30%), Positives = 29/79 (36%)
 Frame = +3

Query: 81  PGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPP 260
           PGS H  PL P  PH        +P  P   S   PPPS    H    S   S   P P 
Sbjct: 419 PGSGH--PLPPASPHHVPPLQQ-QPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPH 475

Query: 261 RHGLNHRPHQAGSKGIFKG 317
           +  +    + + S G   G
Sbjct: 476 QELIGQNSNDSSSGGAHSG 494

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/80 (26%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
 Frame = +3

Query: 69  PPSLP---GSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDS 239
           PP+ P   G   L P  P++        G   L P   + P P     +          S
Sbjct: 152 PPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSPRFLPRGNAPS 211

Query: 240 TRPPPPPRHGLNHRPHQAGS 299
             PPPPP   LN   +  G+
Sbjct: 212 PAPPPPPAISLNAPSYNWGA 231

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>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 20/65 (30%), Positives = 26/65 (40%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP  P +   +P  P  P          P    A   P PPP +KA      +   + +P
Sbjct: 168 PPQPPPAKQPSPPPPPPPVKA-------PSPSPAKQPPPPPPPVKAPSPSPATQPPTKQP 220

Query: 249 PPPPR 263
           PPPPR
Sbjct: 221 PPPPR 225

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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
 Frame = +3

Query: 99  APLSPTLPHXXXXXXGIR---PLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPP-PRH 266
           AP  P+ P+      G     P +P   S P P P   A    +  G+    PPPP P  
Sbjct: 214 APPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGA----LPPGIPPAMPPPPMPPG 269

Query: 267 GLNHRPHQAGSKG 305
              H P  AG+ G
Sbjct: 270 AAGHGPPSAGTPG 282

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>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 400  QDHHQQEEVETRQVKARKEGCCSTQRSQPAAAKA 501
            QDHHQQ E +T + K + +G     RS P   K+
Sbjct: 1040 QDHHQQRERQTHEEKEKYQGGQDQSRSFPNREKS 1073

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>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +3

Query: 174  SVPWPPPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPH 287
            S P PP      HH  H       PPP P H   H PH
Sbjct: 990  SGPLPPAHHHPPHHHHHHA-----PPPQPHHHHAHPPH 1022

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>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
           protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
           ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
           sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP  PGS  +A L P             P  P+      PPP LK    +  + V    P
Sbjct: 769 PPPTPGSA-MAQLKPA------------PCAPSLPQFSAPPPPLKIHQVQHITQVAPPTP 815

Query: 249 PPPP 260
           PPPP
Sbjct: 816 PPPP 819

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>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 475

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/66 (30%), Positives = 24/66 (36%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           PP  PG   L P+ PT P       G   + P A  V  P P +      +H       P
Sbjct: 242 PPPPPGGLPLPPMPPTGP-APSGPPGPPQMPPPAPGVHPPAPVVHPPTSGVHPPAPGVHP 300

Query: 249 PPPPRH 266
           P P  H
Sbjct: 301 PAPVVH 306

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>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain|
           protein MBH1) (Homeobox protein B-H1)
          Length = 384

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
 Frame = +3

Query: 144 GIRPLLPTAASVPWPPPSLKAT----HHRIHSGVDSTRPPPPPRHGLNHRPHQ 290
           G  P  P + ++  P P L       HH +H G     P  PP   L   P Q
Sbjct: 60  GTAPSSPISVTLEPPEPHLVTDGPQHHHHLHHGQQPPPPSAPPAQSLQPSPQQ 112

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>VL2_HPV2A (P25487) Minor capsid protein L2|
          Length = 524

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWP 188
           PP++PG   L P++P+LP       G   L+P  + V WP
Sbjct: 470 PPNVPGMGPLIPVAPSLPSSVYIFGGDYYLMP--SYVLWP 507

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>PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20|
          Length = 902

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
 Frame = +3

Query: 66  FPPSLPGSHHLAPL---SPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVD 236
           F PS P S   +P+   +P+ P            LP  +S  W P S           VD
Sbjct: 778 FQPSAPSSFSSSPVRSPAPSAPARRESPPKTLSFLPHPSSSAWQPAS-----------VD 826

Query: 237 STRPPPPP 260
              PPPPP
Sbjct: 827 FLPPPPPP 834

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>COVA1_MOUSE (Q8R0Z2) Tumor-associated hydroquinone oxidase (tNOX) (Cytosolic|
           ovarian carcinoma antigen 1) (APK1 antigen) [Includes:
           Hydroquinone [NADH] oxidase (EC 1.-.-.-); Protein
           disulfide-thiol oxidoreductase (EC 1.-.-.-)]
          Length = 598

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +3

Query: 147 IRPLLPTAASVPWP-PPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPHQAGSKGIFKGGI 323
           I P++P    VP P PP +      IH    +  PP P       R    G K +F GG+
Sbjct: 47  ITPMMPGLGIVPPPIPPDMPVAKEIIHCKSCTLFPPNPNLPPPATRERPPGCKTVFVGGL 106

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>EXPA_DROME (Q07436) Protein expanded|
          Length = 1427

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 102 PLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGV 233
           PL P+LP        I   LP+    PW   +++A  HR H G+
Sbjct: 238 PLPPSLPPNGADYYRIEDYLPSGLHTPWARSAMRAC-HREHLGM 280

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>ENG2_YEAST (Q12168) Endo-1,3(4)-beta-glucanase 2 (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 2) (Endo-1,3-beta-glucanase 2)
           (Laminarinase-2)
          Length = 779

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 216 RIHSGVDSTRPPPPPRHGLNHRPHQAGSKGIFKGGI*RTQTLLSPEANSWWKKQPWGQGT 395
           R +SGVD+  P  P     +     + +KG+F  G  + +   S + NS +  + WG  T
Sbjct: 569 RDYSGVDNDDPYFPQFRSFDWFNGHSWAKGLFPSGDGKDEESTSEDVNSCYAIKLWGLVT 628

Query: 396 G 398
           G
Sbjct: 629 G 629

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>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7|
          Length = 471

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
 Frame = +3

Query: 69  PPSLPGSH--HLAPLSPTLP-HXXXXXXGIRP--------LLPTAASVPWPPPS--LKAT 209
           PP  PG H  HL P  P LP H      G  P          P   +   PPP   +KA+
Sbjct: 255 PPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKAS 314

Query: 210 HHRIHSGVDSTRPPP 254
               H G   + PPP
Sbjct: 315 TPYNHHGSRDSGPPP 329

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>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7|
           (Cleavage and polyadenylation specificity factor 59 kDa
           subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor
           Im 59-kDa subunit)
          Length = 471

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
 Frame = +3

Query: 69  PPSLPGSH--HLAPLSPTLP-HXXXXXXGIRP--------LLPTAASVPWPPPS--LKAT 209
           PP  PG H  HL P  P LP H      G  P          P   +   PPP   +KA+
Sbjct: 255 PPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKAS 314

Query: 210 HHRIHSGVDSTRPPP 254
               H G   + PPP
Sbjct: 315 APYNHHGSRDSGPPP 329

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>COVA1_HUMAN (Q16206) Tumor-associated hydroquinone oxidase (tNOX) (Cytosolic|
           ovarian carcinoma antigen 1) (APK1 antigen) [Includes:
           Hydroquinone [NADH] oxidase (EC 1.-.-.-); Protein
           disulfide-thiol oxidoreductase (EC 1.-.-.-)]
          Length = 610

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +3

Query: 147 IRPLLPTAASVPWP-PPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPHQAGSKGIFKGGI 323
           I P++P    VP P PP +      IH    +  PP P       R    G K +F GG+
Sbjct: 76  ITPMMPGLGIVPPPIPPDMPVVKEIIHCKSCTLFPPNPNLPPPATRERPPGCKTVFVGGL 135

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>Y066_NPVLD (P30325) Hypothetical protein in POL 5'region (Fragment)|
          Length = 369

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 9/65 (13%)
 Frame = +3

Query: 102 PLSPTLPHXXXXXXGIRPLLPTAASVPWPP----PSLKATHHRIHSGVD-----STRPPP 254
           P+ P  P        I P  PT AS P PP    P+    +  I+S  +     S RPPP
Sbjct: 106 PVGPARP-TDAFGAPIAPSEPTPASAPSPPKADAPNPIQQNVYINSAGEAARPSSPRPPP 164

Query: 255 PPRHG 269
           PP  G
Sbjct: 165 PPASG 169

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>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 22/76 (28%), Positives = 27/76 (35%)
 Frame = +3

Query: 69  PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
           P   PG     P S + P       G  P      + P PPP+       + S      P
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT-PTPPPA-------VTSAPPGAPP 166

Query: 249 PPPPRHGLNHRPHQAG 296
           P PP  G+   P QAG
Sbjct: 167 PTPPSSGVPTTPPQAG 182

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>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)|
          Length = 2001

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +3

Query: 168 AASVPWPPPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPHQAGS 299
           AA+ P PPP++ ++   +H G+ ++ PPP   + +   PH + S
Sbjct: 62  AAAAPPPPPAVASSS--LH-GIAASVPPPSSTNSMRATPHSSSS 102

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>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)|
          Length = 488

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 15/77 (19%)
 Frame = +3

Query: 99  APLSPTLPHXXXXXXGIRPLLPTAASVPWPPPS--------LKATHHRIH-------SGV 233
           A L    PH         PL PT    P   P+        L A +H  H          
Sbjct: 74  AHLGSVHPHASFQAAARSPLRPTPVVAPSEVPAGFPQRLSPLPAAYHHHHPQQQQQQQQP 133

Query: 234 DSTRPPPPPRHGLNHRP 284
              +PPPPPR G    P
Sbjct: 134 QQQQPPPPPRAGALQPP 150

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +3

Query: 93  HLAPLSPTLPHXXXX----XXGIRPLLPTAASVPWP--PPSLKATHHRIHSGVDSTRPPP 254
           + +PL P+ P           G RP+LP   S P P  PPS  A +  + S      PPP
Sbjct: 376 NFSPLPPSPPIMISSPPGKATGPRPVLPVCVSSPVPQMPPSPTAPNGSLDSVTYPVSPPP 435

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>SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially expressed|
           2-like)
          Length = 456

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -1

Query: 492 CGRLAPLR*AATFFACFDLPRFDFF--LLMMVLNQSPDPMAASSTRSW 355
           CG L   R  A +  CF    F FF  LLM+ ++ S DP AA     W
Sbjct: 88  CGSLLGYR--AVYRMCFATAAFFFFFTLLMLCVSSSRDPRAAIQNGFW 133

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>PTC1_BRARE (Q98864) Protein patched homolog 1 (Patched 1) (PTC1)|
          Length = 1220

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 156  LLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPPRHGLNHRPHQAG 296
            LLP   S+  PP  +   ++  H    S  P PPP   +NH  + AG
Sbjct: 1159 LLPVLLSLMGPPAEVVPANNANHLQSPSPEPMPPP---MNHHGYYAG 1202

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>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (Nuclear receptor coregulator 1) (Fragment)
          Length = 458

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 21/65 (32%), Positives = 26/65 (40%)
 Frame = +3

Query: 81  PGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRPPPPP 260
           P S  + P SP  P          P  P+A   P PPP L +    I S + S   PPP 
Sbjct: 25  PLSQGIPPSSPPGP----------PHTPSAPPPPMPPPPLGSPFPVISSSMGSPGLPPPA 74

Query: 261 RHGLN 275
             G +
Sbjct: 75  PPGFS 79

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>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 96  LAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSL 200
           +A  SP LPH      G  P LP+    P PPP+L
Sbjct: 164 VASSSPNLPHRDAAVAGSSPRLPSLLP-PRPPPAL 197

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>FMN2_MOUSE (Q9JL04) Formin-2|
          Length = 1567

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 25/72 (34%), Positives = 27/72 (37%)
 Frame = +3

Query: 69   PPSLPGSHHLAPLSPTLPHXXXXXXGIRPLLPTAASVPWPPPSLKATHHRIHSGVDSTRP 248
            PP LPG     P  P LP       GI P  P   S   PPP+L               P
Sbjct: 1012 PPPLPGVG--IPPPPPLP-----GMGIPPPPPLPGSGIPPPPALPGV----------AIP 1054

Query: 249  PPPPRHGLNHRP 284
            PPPP  G+   P
Sbjct: 1055 PPPPLPGMGVPP 1066


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,896,578
Number of Sequences: 219361
Number of extensions: 1166868
Number of successful extensions: 5641
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5483
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result