Clone Information

BLAST Search Result

Clone Name	bart29c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-su...	172	7e-43
2	DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-su...	168	8e-42
3	DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-su...	164	2e-40
4	DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-su...	164	2e-40
5	DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-su...	157	2e-38
6	DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-su...	157	2e-38
7	DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-su...	156	3e-38
8	DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-su...	155	7e-38
9	DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-su...	154	2e-37
10	DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-su...	152	8e-37
11	DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone...	151	1e-36
12	DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-su...	144	1e-34
13	DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein ...	140	2e-33
14	DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein ...	129	7e-30
15	DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein ...	128	1e-29
16	DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-su...	127	2e-29
17	DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-su...	126	4e-29
18	DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-su...	125	6e-29
19	DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein ...	100	2e-21
20	DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein ...	100	4e-21
21	DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein ...	87	3e-17
22	FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1...	81	2e-15
23	FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1...	80	4e-15
24	FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1...	79	7e-15
25	FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1...	72	1e-12
26	FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1...	71	2e-12
27	FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1...	64	2e-10
28	FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1...	64	2e-10
29	FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1...	64	2e-10
30	FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1...	64	2e-10
31	FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1...	61	2e-09
32	Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092	58	2e-08
33	Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067	55	2e-07
34	DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulf...	47	4e-05
35	DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein ...	39	0.008
36	MOP_DESGI (Q46509) Aldehyde oxidoreductase (EC 1.2.99.7) (Molybd...	35	0.11
37	IORA_BREDI (Q51697) Isoquinoline 1-oxidoreductase alpha subunit ...	32	1.2
38	PYRK_PYRAB (Q9UXV5) Probable dihydroorotate dehydrogenase electr...	31	2.7
39	SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a...	30	3.5
40	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	30	3.5
41	PYRK_PYRKO (Q5JJ90) Probable dihydroorotate dehydrogenase electr...	30	4.6
42	PYRK_PYRHO (O57738) Probable dihydroorotate dehydrogenase electr...	30	4.6
43	CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (...	30	4.6
44	PYRK_METJA (Q58841) Probable dihydroorotate dehydrogenase electr...	30	6.0
45	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	30	6.0
46	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	29	7.9
47	ASCD_YERPS (Q66DP5) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-d...	29	7.9
48	ASCD_YERPE (P68641) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-d...	29	7.9
49	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	29	7.9
50	XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (E...	29	7.9

>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 253

 Score =  172 bits (435), Expect = 7e-43
 Identities = 79/107 (73%), Positives = 89/107 (83%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           KTF IYRW+PD P+ KPHL++YKVDL DCGPMVLDALLKIKNEQD +LTFRRSCREGICG
Sbjct: 21  KTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGICG 80

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI G N LACL KI  + +  + I PLPHMF+VKDLV D+T F
Sbjct: 81  SCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGF 127

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>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 266

 Score =  168 bits (426), Expect = 8e-42
 Identities = 77/107 (71%), Positives = 88/107 (82%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           KTF +YRW+PD PS KPHL+ Y+VDL+DCGPMVLDALLKIK+EQD +LTFRRSCREGICG
Sbjct: 34  KTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICG 93

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI G N LAC+ KI    +    I PLPHMF+VKDLV D+TNF
Sbjct: 94  SCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNF 140

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>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 261

 Score =  164 bits (415), Expect = 2e-40
 Identities = 76/107 (71%), Positives = 88/107 (82%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K+F IYRW+PD+P+ KP +++YKVDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG
Sbjct: 29  KSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 88

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI G N LACL KI         I PLPHM+VVKDLV D+TNF
Sbjct: 89  SCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNF 135

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>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 283

 Score =  164 bits (415), Expect = 2e-40
 Identities = 75/107 (70%), Positives = 87/107 (81%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K FSIYRW+PD PS KP L+ Y +DL  CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 52  KEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRRSCREGICG 111

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNIDG N LACL +I+ E +    I PLPHM+++KDLV DMT+F
Sbjct: 112 SCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHF 158

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>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  157 bits (396), Expect = 2e-38
 Identities = 72/108 (66%), Positives = 87/108 (80%)
 Frame = +2

Query: 230 TKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGIC 409
           TKTF IYRW+PD P+ KP ++ Y +DL+  GPM+LDAL++IKNE DP+LTFRRSCREGIC
Sbjct: 63  TKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGIC 122

Query: 410 GSCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           GSCAMNIDG N LACL +I ++ A  + I PLPH +VVKDLV DMT F
Sbjct: 123 GSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQF 170

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>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score =  157 bits (396), Expect = 2e-38
 Identities = 70/107 (65%), Positives = 86/107 (80%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K F IYRW+PD+   KP+++ Y+VDL +CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 47  KKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICG 106

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI G N LAC++KI    + +  + PLPHM+VV+DLV DM NF
Sbjct: 107 SCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNF 153

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>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 280

 Score =  156 bits (395), Expect = 3e-38
 Identities = 71/107 (66%), Positives = 85/107 (79%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K F+IYRWDPD    KPH++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 40  KKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 99

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI+G N LAC  +I +     S I PLPHM+V+KDLV D++NF
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNF 146

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>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 282

 Score =  155 bits (392), Expect = 7e-38
 Identities = 70/107 (65%), Positives = 86/107 (80%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K F+IYRWDPD    KP ++ Y+VDL+ CGPMVLDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 42  KKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 101

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI+G N LAC  +I ++ +  S I PLPHM+V+KDLV D++NF
Sbjct: 102 SCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNF 148

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>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 252

 Score =  154 bits (388), Expect = 2e-37
 Identities = 72/107 (67%), Positives = 84/107 (78%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           KTF IYRW+P+ P  KP L+ Y VDL+ CGPMVLDAL+KIKNEQDP+LTFRRSCREGICG
Sbjct: 22  KTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 81

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI+G N LAC+  I  +    + I PLPH F+VKDLV D+T F
Sbjct: 82  SCAMNINGSNTLACICNIKKDNK-PTKIYPLPHCFIVKDLVPDLTYF 127

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>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 295

 Score =  152 bits (383), Expect = 8e-37
 Identities = 72/107 (67%), Positives = 84/107 (78%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K F IYRW+PD PS KP L+ Y +DL+  GPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 53  KQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCREGICG 112

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNIDG N LACL +I  +    + I PLPHM++VKDLV D+T F
Sbjct: 113 SCAMNIDGVNTLACLCRIDKQ--NDTKIYPLPHMYIVKDLVPDLTQF 157

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>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur|
           protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP
           subunit of complex II)
          Length = 298

 Score =  151 bits (382), Expect = 1e-36
 Identities = 70/107 (65%), Positives = 85/107 (79%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           KTF IYR++P++P  KP ++ + VDL  CG M+LDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 54  KTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICG 113

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNI G N LAC+ KI S+ + ++ I PLPHMFVVKDLV DM  F
Sbjct: 114 SCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLF 160

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>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score =  144 bits (364), Expect = 1e-34
 Identities = 67/105 (63%), Positives = 80/105 (76%)
 Frame = +2

Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC 418
           F +YRW+PD    KPH+  Y VDL+ CGPMVLDAL+KIKNEQD +LTFRRSCREG+CGSC
Sbjct: 11  FKVYRWNPDKKE-KPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSC 69

Query: 419 AMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           AMNIDG N LAC+  I +       I PLPHM ++KDLV D++NF
Sbjct: 70  AMNIDGTNTLACIKSIDTNKK-EMKIYPLPHMHIIKDLVPDLSNF 113

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>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 259

 Score =  140 bits (354), Expect = 2e-33
 Identities = 70/107 (65%), Positives = 81/107 (75%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           + F+IYRWDPD+    P +  Y VD+  CGPMVLDAL+KIKNE DP+LTFRRSCREGICG
Sbjct: 28  RRFNIYRWDPDT-GENPRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICG 86

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNIDG N LAC+  +  E  G   I PLPHM VVKDLV D+T+F
Sbjct: 87  SCAMNIDGGNHLACIYGM-DEIKGDVNIYPLPHMPVVKDLVPDLTHF 132

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>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  129 bits (323), Expect = 7e-30
 Identities = 65/107 (60%), Positives = 79/107 (73%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           +   IYR+DPD     P +  +++DLS  GPM+LDAL+KIKNE D +LTFRRSCREGICG
Sbjct: 28  RKIKIYRYDPDLDKN-PTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICG 86

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCAMNIDG N LAC+  I  + +G   I PLPHM VVKDLV DM++F
Sbjct: 87  SCAMNIDGTNTLACIKPI-EDISGDIKIYPLPHMKVVKDLVPDMSHF 132

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>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score =  128 bits (322), Expect = 1e-29
 Identities = 65/103 (63%), Positives = 78/103 (75%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           +YR+DPD     P +  +++DLS  GPMVLDAL+KIKNE D +LTFRRSCREGICGSCAM
Sbjct: 32  VYRYDPDLDEN-PTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAM 90

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           NIDG N LAC+  I  + +G   I PLPHM VVKDLV DM++F
Sbjct: 91  NIDGTNTLACIKPI-EDISGDIKIYPLPHMKVVKDLVPDMSHF 132

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>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score =  127 bits (320), Expect = 2e-29
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K   IYRW P S   +     + +  S+CGPM+LDAL+KIK+EQD SL FRRSCREGICG
Sbjct: 11  KFIRIYRWTP-SNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCREGICG 69

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SC+MNIDG N LACL  I +  A   TI PLPHM+++KDLV D++NF
Sbjct: 70  SCSMNIDGINTLACLKPIKTN-ANIITIYPLPHMYIIKDLVPDLSNF 115

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>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 250

 Score =  126 bits (317), Expect = 4e-29
 Identities = 59/107 (55%), Positives = 80/107 (74%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K   IYRW+P+  +  P    + +  ++CGPM+LDAL++IKN QD SLTFRRSCREGICG
Sbjct: 21  KFIRIYRWNPNL-NLNPWFSIFPISTNNCGPMILDALIQIKNIQDSSLTFRRSCREGICG 79

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SC+MNIDG N LACL  ++++ +   TI PLPH +++KDLV D++NF
Sbjct: 80  SCSMNIDGTNSLACLRSLNTK-SNFITIYPLPHTYIIKDLVPDLSNF 125

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>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 262

 Score =  125 bits (315), Expect = 6e-29
 Identities = 62/107 (57%), Positives = 78/107 (72%)
 Frame = +2

Query: 233 KTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           K   I+RWD  S    P    Y V L +CGP+VLDAL+KIKNE D +++FRRSCREGICG
Sbjct: 21  KLIKIFRWD-SSEKKDPWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGICG 79

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           SCA+NI+G N LACL K++ +      + PLPH+FV+KDLVVD+TNF
Sbjct: 80  SCAININGTNSLACLQKLNIK-NNIIYVYPLPHIFVLKDLVVDLTNF 125

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>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score =  100 bits (250), Expect = 2e-21
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 3/108 (2%)
 Frame = +2

Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 415
           FSIYR++PD     P ++DY ++  +   M+L DAL+++K E+DPSL+FRRSCREG+CGS
Sbjct: 5   FSIYRYNPDVDDA-PRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62

Query: 416 CAMNIDGDNGLACLTKIS--SEAAGASTISPLPHMFVVKDLVVDMTNF 553
             +N++G NGLAC+T IS  ++      I PLP + V++DLVVDM  F
Sbjct: 63  DGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQF 110

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>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score =  100 bits (248), Expect = 4e-21
 Identities = 54/108 (50%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
 Frame = +2

Query: 239 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVL-DALLKIKNEQDPSLTFRRSCREGICGS 415
           FSIYR++PD  +  P ++DY ++  +   M+L DAL+++K E+DPSL+FRRSCREG+CGS
Sbjct: 5   FSIYRYNPDVDNA-PRMQDYTLEGEEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62

Query: 416 CAMNIDGDNGLACLTKIS--SEAAGASTISPLPHMFVVKDLVVDMTNF 553
             +N++G NGLAC+T IS  ++      I PLP + V++DLVVDM  F
Sbjct: 63  DGLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQF 110

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>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 235

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 45/107 (42%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = +2

Query: 236 TFSIYRWDPDSPSTKPHLKDYKVDLSDC-GPMVLDALLKIKNEQDPSLTFRRSCREGICG 412
           TFSI R++P++   KP+++D+++D+S   G M+L+AL  ++ E+ P +  RRSC EG+CG
Sbjct: 2   TFSIMRFNPETDK-KPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCG 59

Query: 413 SCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           S  MNI+G N LAC+T++  +      + PLP   +++DL+VDM  F
Sbjct: 60  SDGMNINGKNALACVTQL-KDLPDRVVVRPLPGFPIIRDLIVDMEQF 105

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>FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/99 (41%), Positives = 61/99 (61%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + ++DP S  +KPH K+Y++  +    + + AL  I+  QDP L+F   CR GICGSCAM
Sbjct: 12  VLKFDPQSAVSKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVD 541
            ++G   LAC T  SS  +G  T+ P+P   ++KDL V+
Sbjct: 71  MVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVN 109

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>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 239

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 41/106 (38%), Positives = 59/106 (55%)
 Frame = +2

Query: 236 TFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGS 415
           T  ++++DP S  +KPH ++YK++ +    + +  L  I+   DP L F   CR GICGS
Sbjct: 6   TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIFI-VLNMIRETYDPDLNFDFVCRAGICGS 64

Query: 416 CAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           C M I+G   LAC T       G  T+ PLP   ++KDL VD  N+
Sbjct: 65  CGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNW 110

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>FRDB_HELPJ (Q9ZMP1) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 245

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 41/99 (41%), Positives = 59/99 (59%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + ++DP S   KPH K+Y++  +    + + AL  I+  QDP L+F   CR GICGSCAM
Sbjct: 12  VLKFDPQSAVNKPHFKEYQLKETPSMTLFI-ALNLIREHQDPDLSFDFVCRAGICGSCAM 70

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVD 541
            ++G   LAC T  SS   G  T+ P+P   ++KDL V+
Sbjct: 71  MVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVN 109

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>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 247

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 42/103 (40%), Positives = 62/103 (60%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R+ P+  S  P  + Y+V L+     VLD L  IK+  D +L+FR SCR GICGS  M
Sbjct: 9   VSRYRPEIESA-PTFQAYEVPLTREWA-VLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            I+GD  LAC T ++    G   + P+ +  V++DLVVD+++F
Sbjct: 67  TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDF 109

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>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 256

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 41/103 (39%), Positives = 64/103 (62%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P+    +PHL  Y+V   D    +LDAL  IK++ +PSL++R SCR  ICGSC M
Sbjct: 11  VLRYNPEIDQ-EPHLSTYQVPY-DNQTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +  + +G   I PL +  + +DLVVD+++F
Sbjct: 69  MVNNKPKLACKTFL-RDYSGHMRIEPLANFPIERDLVVDLSHF 110

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>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 57/103 (55%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +     G   +  L +  + +DLVVDMT+F
Sbjct: 68  MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109

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>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 57/103 (55%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +     G   +  L +  + +DLVVDMT+F
Sbjct: 68  MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109

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>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 57/103 (55%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +     G   +  L +  + +DLVVDMT+F
Sbjct: 68  MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109

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>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 40/103 (38%), Positives = 57/103 (55%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P+   T PH   Y+V   D    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 10  VVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 67

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +     G   +  L +  + +DLVVDMT+F
Sbjct: 68  MVNNVPKLACKTFLRDYTDGMK-VEALANFPIERDLVVDMTHF 109

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>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 244

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 40/103 (38%), Positives = 56/103 (54%)
 Frame = +2

Query: 245 IYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAM 424
           + R++P++    PH   Y V   +    +LDAL  IK+   P L++R SCR  ICGSC M
Sbjct: 11  VMRYNPETDDA-PHFVTYDVPYDE-QTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGM 68

Query: 425 NIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
            ++    LAC T +     G   I  L +  V +DLVVDMT+F
Sbjct: 69  MVNRVPKLACKTFMRDYPNGV-RIEALGNFPVERDLVVDMTHF 110

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>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092|
          Length = 489

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = +2

Query: 278 KPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACL 457
           K +L+ Y+V  +     VL+AL  I    + ++ FR SCR   CGSCA+ I+G+  LAC 
Sbjct: 13  KEYLESYEVPENIT---VLEALEYINKHYEANILFRASCRNAQCGSCAVTINGEPRLACE 69

Query: 458 TKISSEAAGASTISPLPHMFVVKDLVVD 541
           TK+         I PL    V++DL+VD
Sbjct: 70  TKVED----GMIIEPLRGFKVIRDLIVD 93

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>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +2

Query: 320 GPMVLDALLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGASTIS 499
           G  +LDAL  I      ++ FR SC+ G CGSCA+ I+  + LAC TK+         I 
Sbjct: 22  GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVEDN----MIIE 77

Query: 500 PLPHMFVVKDLVVD 541
           PL    V+ DLVVD
Sbjct: 78  PLEGFDVISDLVVD 91

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>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II)
           (Fragment)
          Length = 143

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +2

Query: 434 GDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNF 553
           G N LAC  +I +     S I PLPHM+V+KDLV D++NF
Sbjct: 1   GGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNF 40

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>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 252

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +2

Query: 344 LKIKNEQDPSLTFRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGASTISPLPHMFVV 523
           + +K E+   +T+  +C E +CG+C+M I+G    +C T +  +      + P+    VV
Sbjct: 47  VNVKGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSC-TALIDQLEQPIRLKPMKTFPVV 105

Query: 524 KDLVVD 541
           +DL VD
Sbjct: 106 RDLQVD 111

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>MOP_DESGI (Q46509) Aldehyde oxidoreductase (EC 1.2.99.7) (Molybdenum iron|
           sulfur protein)
          Length = 907

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 335 DALLKIKNEQDPSLT-FRRSCREGICGSCAMNIDGDNGLACLTKISSEAAGA 487
           +ALL     Q   LT  +  C +G CG+C++ +DG    AC+TK+   A GA
Sbjct: 20  EALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGA 71

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>IORA_BREDI (Q51697) Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)|
          Length = 152

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +2

Query: 392 CREGICGSCAMNIDGDNGLACLTKISSEAAGAST 493
           C  G+CG+C ++I+G+   +C+T +S  A  + T
Sbjct: 39  CGLGLCGACTVHINGEAARSCITPLSVVARQSVT 72

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>PYRK_PYRAB (Q9UXV5) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 247

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 299 KVDLSD---CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 424
           KV+ S    CGP V+ A +L+I N +   ++  R   C  GICGSCA+
Sbjct: 163 KVEFSQVYACGPEVMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210

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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
 Frame = +1

Query: 283 PPQGLQG-----------GPLRLRPHGARRAPQDQERAGPVPHLPPELP 396
           PP G++G           GP R  P+G +R P    R  P P +PP  P
Sbjct: 369 PPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGP 417

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 25/88 (28%), Positives = 28/88 (31%)
 Frame = +1

Query: 280 APPQGLQGGPLRLRPHGARRAPQDQERAGPVPHLPPELPXXXXXXXXXXXXXXXXXXXPH 459
           APP G  G P    PH  ++  Q Q+   P P  PP  P                   PH
Sbjct: 211 APPAGPTGLPPPTPPHHLQQQQQQQQHPAPPP--PPYFP------AAALAALAGSPAGPH 262

Query: 460 QDLLGGGRCLHDLAAPAHVRRQGPRRRH 543
             L  GG     L  P H     P   H
Sbjct: 263 PGLYPGG----GLRFPPHHPGAHPHAHH 286

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>PYRK_PYRKO (Q5JJ90) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 233

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +2

Query: 317 CGPM-VLDALLKIKNEQDPSLTFRR--SCREGICGSC 418
           CGP  +L A+LK+ N ++  ++  R   C  G+CGSC
Sbjct: 174 CGPEPMLKAVLKVMNYKNVQISAERYMKCGIGVCGSC 210

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>PYRK_PYRHO (O57738) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 247

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +2

Query: 317 CGPMVLDA-LLKIKNEQDPSLTFRR--SCREGICGSCAM 424
           CGP ++ A +L+I N +   ++  R   C  GICGSCA+
Sbjct: 172 CGPEIMLAKVLEIMNYERTQISAERYMKCGIGICGSCAL 210

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>CXA3_SHEEP (Q9TU17) Gap junction alpha-3 protein (Connexin-44) (Cx44)|
          Length = 412

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +1

Query: 268 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVP----HLPPELP 396
           P    PP    GGP +  P GA  +  D +  G V     H PPE P
Sbjct: 342 PPASTPPAAPAGGPQQFLPGGAAGSSGDSDGEGAVTAVELHAPPEPP 388

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>PYRK_METJA (Q58841) Probable dihydroorotate dehydrogenase electron transfer|
           subunit
          Length = 257

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 278 KPHLKDYKVDLS-DCGP-MVLDALLKIKNEQD----PSLTFRRSCREGICGSCAMNIDG 436
           K  LK+ K DL   CGP +++  +++I NE +     S+     C  GICG C ++ +G
Sbjct: 164 KEVLKEEKFDLIITCGPEIMMKKVVEIANEYNIPVQVSMERYMKCGIGICGQCCVDDEG 222

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 268 PVDEAPPQGLQGGPLRLRPHGARRAPQDQERAGPVPHLPPELP 396
           P D   PQG+Q  P    P G +  P  Q  +GP  H+ P+ P
Sbjct: 668 PQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGP 710

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 268 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 396
           P+   PP    G   R  P   +   R+  D  R+GP P LPP+ P
Sbjct: 362 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 407

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>ASCD_YERPS (Q66DP5) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase|
           reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase)
           (EC 1.17.1.-) (E3)
          Length = 328

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 311 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGDNGLACLTKISSEAAGA 487
           SD    +LDA L      D ++    SC++G CGSC A+ I G+   A  T ++ E    
Sbjct: 15  SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGEVDSAENTFLTEEDVAK 68

Query: 488 STI 496
             I
Sbjct: 69  GAI 71

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>ASCD_YERPE (P68641) CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase|
           reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase)
           (EC 1.17.1.-) (E3)
          Length = 328

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 311 SDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGSC-AMNIDGDNGLACLTKISSEAAGA 487
           SD    +LDA L      D ++    SC++G CGSC A+ I G+   A  T ++ E    
Sbjct: 15  SDGTSTILDAAL------DSNIHIEYSCKDGTCGSCKAILISGEVDSAENTFLTEEDVAK 68

Query: 488 STI 496
             I
Sbjct: 69  GAI 71

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 268 PVDEAPPQGLQGGPLRLRPHGAR---RAPQDQERAGPVPHLPPELP 396
           P+   PP    G   R  P   +   R+  D  R+GP P LPP+ P
Sbjct: 368 PLPPPPPINRNGSTARALPATPQLPSRSGMDSPRSGPRPPLPPDRP 413

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>XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (EC 1.17.1.4)|
           (XDHase subunit E)
          Length = 173

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 389 SCREGICGSCAMNIDGDNGLACLT 460
           SC  G CG+C++ IDG    AC+T
Sbjct: 51  SCGIGRCGACSILIDGKLANACMT 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,722,039
Number of Sequences: 219361
Number of extensions: 614752
Number of successful extensions: 2854
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2820
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result