ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart29c08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ539160.1|TAE539160 Triticum aestivum sdh2-rps14 gene Length = 3666 Score = 672 bits (339), Expect = 0.0 Identities = 381/395 (96%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 548 ccgcctcgtcgcctccaagccccactcctcgtcccccgcgccaccgccgccatcgtcgaa 607 Query: 220 gcctgctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgacgaa 279 ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 608 gcccgccagcaccaagaccttctcgatctaccgctgggacccggactccccgtcgaccaa 667 Query: 280 gccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcgacgc 339 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 668 gccccacctcaaggactacaaggtggacctctcggactgcggccccatggtgctcgacgc 727 Query: 340 gctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcga 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 gctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcga 787 Query: 400 gggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcctcac 459 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gggcatctgcggcacgtgcgccatgaacatcgacggcgacaacgggctggcctgcctcac 847 Query: 460 caagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgttcgt 519 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 848 caagatctcctcggaggcggccggggcctccacgatctcgccgctcccccacatgttcgt 907 Query: 520 cgtcaaggacctcgtcgtcgacatgaccaacttct 554 ||||||||||||||||||||||||||||||||||| Sbjct: 908 cgtcaaggacctcgtcgtcgacatgaccaacttct 942 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 1 acgcgccaccttcccctctcctacctcccaaaaataaaggagaaaaag 48 ||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 397 acgcgcccccttcccctctccaacctcccaaaaataaaggagaaaaag 444 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 73 aacgcgaaaccccaaatcgatggc 96 |||||||||||||||||||||||| Sbjct: 461 aacgcgaaaccccaaatcgatggc 484
>ref|XM_479820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1257 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 135 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 194 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 195 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 254 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 255 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 314 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 374 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 375 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 434 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 491 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 492 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 529
>ref|XM_507103.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-2 mRNA Length = 1328 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 131 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 190 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 191 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 250 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 251 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 310 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 311 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 370 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 371 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 430 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 431 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 487 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 488 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 525
>ref|XM_479819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1154 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 136 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 195 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 196 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 255 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 256 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 315 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 316 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 375 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 376 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 435 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 436 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 492 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 493 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 530
>ref|XM_507565.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1218 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 135 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 194 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 195 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 254 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 255 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 314 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 374 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 375 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 434 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 491 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 492 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 529
>ref|XM_507564.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1219 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 136 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 195 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 196 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 255 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 256 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 315 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 316 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 375 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 376 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 435 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 436 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 492 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 493 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 530
>ref|XM_507563.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1208 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 136 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 195 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 196 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 255 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 256 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 315 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 316 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 375 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 376 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 435 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 436 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 492 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 493 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 530
>ref|XM_507102.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1005_B05.29-1 mRNA Length = 1163 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 138 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 197 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 198 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 257 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 258 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 317 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 318 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 377 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 378 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 437 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 438 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 494 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 495 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 532
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 1088208 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 1088149 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 1088148 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 1088089 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 1088088 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 1088029 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1088028 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 1087969 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 1087968 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 1087909 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 1087908 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 1087852 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 1087851 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 1087814
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 1445 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 1386 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 1385 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 1326 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 1325 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 1266 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1265 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 1206 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 1205 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 1146 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 1145 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 1089 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 1088 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 1051
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 116735 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 116676 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 116675 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 116616 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 116615 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 116556 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 116555 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 116496 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 116495 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 116436 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 116435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 116379 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 116378 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 116341
>dbj|AK104421.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C04, full insert sequence Length = 1154 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 136 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 195 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 196 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 255 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 256 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 315 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 316 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 375 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 376 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 435 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 436 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctccctcacatgtt 492 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 493 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 530
>dbj|AK104304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-D05, full insert sequence Length = 1208 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 136 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 195 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 196 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 255 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 256 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 315 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 316 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 375 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 376 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 435 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 436 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 492 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 493 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 530
>dbj|AK104303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-F04, full insert sequence Length = 1218 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 135 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 194 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 195 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 254 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 255 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 314 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 374 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 375 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 434 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 491 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 492 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 529
>dbj|AK102607.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099B04, full insert sequence Length = 1257 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 135 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 194 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 195 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 254 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 255 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 314 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 374 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 375 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 434 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 491 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 492 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 529
>dbj|AK099077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D08, full insert sequence Length = 1218 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 135 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 194 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 195 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 254 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 255 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 314 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 315 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 374 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 375 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 434 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 435 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 491 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 492 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 529
>dbj|AK059815.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B11, full insert sequence Length = 1163 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 138 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 197 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 198 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 257 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 258 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 317 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 318 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 377 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 378 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 437 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 438 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 494 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 495 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 532
>dbj|AK059789.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D12, full insert sequence Length = 1328 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 131 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 190 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 191 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 250 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 251 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 310 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 311 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 370 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 371 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 430 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 431 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 487 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 488 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 525
>dbj|AB017429.1| Oryza sativa (japonica cultivar-group) rps14 and sdhB genes for mitochondrial ribosomal portein S14 and succinate dehydrogenase iron-protein subunit, complete cds Length = 3700 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 271 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 330 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 331 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 390 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 391 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 450 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 451 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 510 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 511 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 570 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 571 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 627 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 628 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 665
>dbj|AB017428.1| Oryza sativa (japonica cultivar-group) mRNA for succinate dehydrogenase iron-protein subunit (SDHB), complete cds Length = 1113 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 124 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 183 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 184 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 243 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 244 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 303 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 304 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 363 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 364 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 423 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 424 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 480 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 481 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 518
>dbj|AB017427.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial ribosomal protein S14, complete cds Length = 1233 Score = 448 bits (226), Expect = e-123 Identities = 356/398 (89%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgccgccctcatcgaa 219 |||||||||||||||||||||||| || || |||||||||||||||||||| | ||||| Sbjct: 89 ccgcctcgtcgcctccaagccccactcgtcgtcccccgcgccgccgccgccgccgtcgaa 148 Query: 220 gcctg---ctagcaccaagaccttctcgatctaccgctgggacccggattccccgtcgac 276 | | | | | ||||||||| |||||||||||| | ||||| || || || |||||||| Sbjct: 149 ggcgggggcgaacaccaagacgttctcgatctacaggtgggatcccgactcgccgtcgac 208 Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 209 gaagccccacctcaaggactacaaggtggacctctccgactgcgggccgatggtgctcga 268 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 || ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 269 cgtgctgctcaagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccg 328 Query: 397 cgagggcatctgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcct 456 |||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 329 cgaggggatctgcgggagctgcgcgatgaacatcgacggcgacaatggcctcgcctgcct 388 Query: 457 caccaagatctcctcggaggcggccggtgcctccacgatctcgccgctcccgcacatgtt 516 |||||||||||| || |||| || ||||||||||||||||||||||| |||||||| Sbjct: 389 caccaagatctcgtc---ggcgtcctcggcctccacgatctcgccgctcccccacatgtt 445 Query: 517 cgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||| ||||||||||||||||||||||||||||||||| Sbjct: 446 cgtcatcaaggacctcgtcgtcgacatgaccaacttct 483
>emb|AJ012374.1|ZMA012374 Zea mays nuclear sdh2-rps14 gene Length = 3480 Score = 355 bits (179), Expect = 1e-94 Identities = 227/243 (93%) Strand = Plus / Plus Query: 227 agcaccaagaccttctcgatctaccgctgggacccggattccccgtcgacgaagccccac 286 ||||| |||||||||||||||||||| ||||||||||| || |||||||||||||| ||| Sbjct: 320 agcacgaagaccttctcgatctaccggtgggacccggactcgccgtcgacgaagccgcac 379 Query: 287 ctcaaggactacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctc 346 |||||||||||| |||||||||| ||||||||||| || |||||||| |||||||| ||| Sbjct: 380 ctcaaggactaccaggtggacctgtccgactgcgggccgatggtgctggacgcgctgctc 439 Query: 347 aagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatc 406 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 440 aagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccgcgagggcatc 499 Query: 407 tgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 500 tgcgggagctgcgccatgaacatcgacggcgacaacggcctcgcctgcctcaccaagatc 559 Query: 467 tcc 469 ||| Sbjct: 560 tcc 562 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 488 tccacgatctcgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgacc 547 |||||| |||||||||| || ||||||||||||||||||||||| || || ||||||||| Sbjct: 578 tccacggtctcgccgctgccccacatgttcgtcgtcaaggacctggtggtggacatgacc 637 Query: 548 aacttct 554 ||||||| Sbjct: 638 aacttct 644 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgcc 207 |||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 253 ccgcctcgtcgcgtccaagccccactcctcgtcccccgcgccgccgcc 300
>gb|BT017381.1| Zea mays clone EL01N0326E03.c mRNA sequence Length = 1367 Score = 335 bits (169), Expect = 9e-89 Identities = 226/245 (92%) Strand = Plus / Plus Query: 227 agcaccaagaccttctcgatctaccgctgggacccggattccccgtcgacgaagccccac 286 ||||| |||||||||||||||||||| ||||||||||| || |||||||| ||||| ||| Sbjct: 191 agcacgaagaccttctcgatctaccggtgggacccggactcgccgtcgaccaagccgcac 250 Query: 287 ctcaaggactacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctc 346 |||| ||||||| |||||||||| ||||||||||| || |||||||| |||||||| ||| Sbjct: 251 ctcagggactaccaggtggacctgtccgactgcgggccgatggtgctggacgcgctgctc 310 Query: 347 aagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatc 406 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 311 aagatcaagaacgagcaggacccgtcgctcaccttccgccgcagctgccgcgagggcatc 370 Query: 407 tgcggcagctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 371 tgcgggagctgcgccatgaacatcgacggggacaacggtctcgcctgcctcaccaagatc 430 Query: 467 tcctc 471 ||||| Sbjct: 431 tcctc 435 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 495 tctcgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||||||||| || |||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 456 tctcgccgctgccccacatgttcgtcatcaaggacctggtggtcgacatgaccaacttct 515 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 160 ccgcctcgtcgcctccaagccccattcctcttcccccgcgccgccgcc 207 |||||||||||| ||||||||||| ||||| |||||| ||| |||||| Sbjct: 121 ccgcctcgtcgcgtccaagccccactcctcctcccccacgcagccgcc 168
>dbj|D10414.1|RICK7 Oryza sativa mRNA for succinate dehydrogenase (K7 gene), partial sequence Length = 814 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 485 gcctccacgatctcgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatg 544 ||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 29 gcctccacgatctcgccgctcccccacatgttcgtcattaaggacctcgtcgtcgacatg 88 Query: 545 accaacttct 554 |||||||||| Sbjct: 89 accaacttct 98
>gb|AY118923.1| Drosophila melanogaster LD23740 full insert cDNA Length = 1247 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 327 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 386 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 387 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 446 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 447 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 498
>ref|NM_057753.3| Drosophila melanogaster Succinate dehydrogenase B CG3283-RA (SdhB), mRNA Length = 1235 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 345 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 404 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 405 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 464 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 465 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 516
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 101791 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 101850 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 101851 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 101910 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 101911 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 101962
>gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR04F03, complete sequence Length = 150587 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 50880 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 50939 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 50940 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 50999 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 51000 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 51051
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 138002 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 138061 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 138062 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 138121 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 138122 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 138173
>gb|L27705.1|DROSDHB Drosophila melanogaster succinate dehydrogenase iron-subunit (sdhB) gene, complete cds Length = 2741 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccgactgcggccccatggtgctcgacgcgctcctcaagatcaa 354 |||| |||||||||| ||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1490 ctacgaggtggacctgcgcgagtgcggccccatggtgctggacgcgctgatcaagatcaa 1549 Query: 355 gaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcag 414 ||||||| |||||| | |||||||| | || ||| |||||||||||||||||| Sbjct: 1550 gaacgagatggaccccacgctcacctttaggcgctcctgtcgcgagggcatctgcggctc 1609 Query: 415 ctgcgccatgaacatcgacggcgacaacgggctggcctgcctcaccaagatc 466 ||||||||||||||||| |||| |||| |||||||||| ||| ||||||| Sbjct: 1610 ctgcgccatgaacatcggcggcaccaacacgctggcctgcatcagcaagatc 1661
>gb|U31902.1|PDU31902 Paracoccus denitrificans succinate dehydrogenase b-type cytochrome subunit (sdhC), succinate dehydrogenase hydrophobic membrane anchor (sdhD), succinate dehydrogenase flavoprotein subunit (sdhA), and succinate dehydrogenase iron-sulfur protein subunit (sdhB) genes, complete cds Length = 6380 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| ||||||||||| |||||||| ||||||||||||||||| |||||| | || Sbjct: 5375 tgcggtcccatggtgctggacgcgctgatcaagatcaagaacgagatcgacccgacgctg 5434 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| Sbjct: 5435 accttccgccgttcctgccgagagggcatctgcggctcctgcgccatgaatatcgacggc 5494 Query: 437 gacaac 442 | |||| Sbjct: 5495 ggcaac 5500
>ref|XM_369077.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00167.4) partial mRNA Length = 825 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 323 cccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttc 382 ||||||||||||||||| || ||| |||||||||||||| ||||||| || | || ||| Sbjct: 214 cccatggtgctcgacgctctggtcaggatcaagaacgagctggacccgaccttgactttc 273 Query: 383 cgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacgg 435 ||||| |||||| | ||||| |||||||| |||||||||||||||||| |||| Sbjct: 274 cgccgaagctgcagagagggtatctgcggaagctgcgccatgaacatcaacgg 326
>ref|XM_503189.1| Yarrowia lipolytica CLIB122, YALI0D23397g predicted mRNA Length = 807 Score = 105 bits (53), Expect = 2e-19 Identities = 128/153 (83%) Strand = Plus / Plus Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||| | |||||||| ||| |||| ||||| || | || |||||||||||||| || Sbjct: 150 gaagcccgagctcaaggagtacgaggtcgacctgtcacagtgtggccccatggtgctgga 209 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 ||||||| ||||||||||||||||||||||||| |||| || ||||| ||| ||||| Sbjct: 210 cgcgctcatcaagatcaagaacgagcaggaccccaccctgacgttccgacggtcgtgccg 269 Query: 397 cgagggcatctgcggcagctgcgccatgaacat 429 ||||||||||| ||| ||| ||||||||||| Sbjct: 270 agagggcatctgtggctcctgtgccatgaacat 302
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||| ||||||||||| |||||| ||||||| ||| ||||||||||||| ||||| Sbjct: 2466566 tgcggcccgatggtgctcgatgcgctcatcaagatgaagggcgagcaggacccgaccctc 2466625 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 ||||||||||| ||||||||| ||||||||||| |||||| |||||||| Sbjct: 2466626 accttccgccgttcctgccgcgaaggcatctgcggttcctgcgcgatgaacat 2466678
>gb|AY850306.1| Magnaporthe grisea succinate dehydrogenase ubiquinone iron-sulfur protein-like protein mRNA, complete cds Length = 1109 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 323 cccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttc 382 ||||||||||||||||| || ||| |||||||||||||| ||||||| || | || ||| Sbjct: 350 cccatggtgctcgacgctctggtcaggatcaagaacgagctggacccgaccttgactttc 409 Query: 383 cgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacgg 435 ||||| |||||| | ||||| |||||||| |||||||||||||||||| |||| Sbjct: 410 cgccgaagctgcagagagggtatctgcggaagctgcgccatgaacatcaacgg 462
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 105 bits (53), Expect = 2e-19 Identities = 128/153 (83%) Strand = Plus / Plus Query: 277 gaagccccacctcaaggactacaaggtggacctctccgactgcggccccatggtgctcga 336 ||||||| | |||||||| ||| |||| ||||| || | || |||||||||||||| || Sbjct: 3041934 gaagcccgagctcaaggagtacgaggtcgacctgtcacagtgtggccccatggtgctgga 3041993 Query: 337 cgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccg 396 ||||||| ||||||||||||||||||||||||| |||| || ||||| ||| ||||| Sbjct: 3041994 cgcgctcatcaagatcaagaacgagcaggaccccaccctgacgttccgacggtcgtgccg 3042053 Query: 397 cgagggcatctgcggcagctgcgccatgaacat 429 ||||||||||| ||| ||| ||||||||||| Sbjct: 3042054 agagggcatctgtggctcctgtgccatgaacat 3042086
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| || ||||| |||||||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 2738389 tgcgggccgatggtcctcgacgccctcatcaagatcaagaacgaggtcgaccccaccctc 2738448 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| |||||| || || ||||||||| |||||| ||||||||||||||| Sbjct: 2738449 accttccgccgctcctgccgtgaagggatctgcggctcctgcgcgatgaacatcgacggc 2738508 Query: 437 gacaacgggctggcctgc 454 |||| |||||||||| Sbjct: 2738509 atcaacacgctggcctgc 2738526 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gatctaccgctgggacccgga 264 ||||||||||||||||||||| Sbjct: 2738319 gatctaccgctgggacccgga 2738339
>gb|DQ066192.1| Ixodes scapularis isolate ISUFL97 succinate dehydrogenase Ip subunit mRNA, complete cds Length = 849 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| ||||||||||| ||||| || ||||||||||||||||| ||||||| | || Sbjct: 196 tgcgggcccatggtgctggacgcactgatcaagatcaagaacgaggtggacccgacgctg 255 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcga 432 ||||||||||| |||||| |||||||||||||| ||||||||||||||||| Sbjct: 256 accttccgccgctcctgccgggagggcatctgcgggtcgtgcgccatgaacatcga 311
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 85.7 bits (43), Expect = 1e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 320 ggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcacc 379 ||||| |||||||||||||||||| ||||||| |||| ||||||||| || | || ||| Sbjct: 2347833 ggcccgatggtgctcgacgcgctcatcaagatgaagagcgagcaggattcgacgctgacc 2347774 Query: 380 ttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggcgac 439 |||||||| |||||||| ||||||||||||||||| | |||||||| ||||| | Sbjct: 2347773 ttccgccgttcgtgccgcgaaggcatctgcggcagctgttcgatgaacatgaacggcaag 2347714 Query: 440 aacgggctggcctgc 454 ||||| || |||||| Sbjct: 2347713 aacggcctcgcctgc 2347699
>gb|AE012320.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 228 of 460 of the complete genome Length = 13110 Score = 79.8 bits (40), Expect = 9e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| || ||||| || |||||||| ||||||||||||||||| |||||| |||| Sbjct: 703 tgcggaccgatggtcctggacgcgctgatcaagatcaagaacgagatcgacccgaccctg 644 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 643 accttccgccgctcctgccgcgaaggcatctgcggttcgtgcgcgatgaacatcgacggc 584
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 79.8 bits (40), Expect = 9e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| || ||||| || |||||||| ||||||||||||||||| |||||| |||| Sbjct: 2396924 tgcggaccgatggtcctggacgcgctgatcaagatcaagaacgagatcgacccgaccctg 2396983 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 2396984 accttccgccgctcctgccgcgaaggcatctgcggttcgtgcgcgatgaacatcgacggc 2397043
>gb|AF457978.1| Zea mays clone cen3n.pk0018.h7, mRNA sequence Length = 463 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 495 tctcgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 |||||||||| || |||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 62 tctcgccgctgccccacatgttcgtcatcaaggacctggtggtcgacatgaccaacttct 121 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 431 gacggcgacaacgggctggcctgcctcaccaagatctcctc 471 ||||| |||||||| || ||||||||||||||||||||||| Sbjct: 1 gacggggacaacggcctcgcctgcctcaccaagatctcctc 41
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 365 gacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatg 424 |||||||| || ||||||||||| ||||||||| ||| |||||||| |||||||||| Sbjct: 552606 gacccgtcgctgaccttccgccgctcctgccgcgaaggcgtctgcggctcctgcgccatg 552665 Query: 425 aacatcgacggcgacaacgggctggcctgc 454 |||||||||||| | ||| |||||||||| Sbjct: 552666 aacatcgacggccagaacacgctggcctgc 552695
>gb|AF007569.1|AF007569 Bradyrhizobium japonicum GstR (gstR) gene, partial cds, and succinate dehydrogenase membrane anchor subunit (sdhC), membrane anchor subunit (sdhD), flavoprotein subunit (sdhA) and iron-sulfur protein subunit (sdhB) genes, complete cds Length = 5284 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 365 gacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatg 424 |||||||| || ||||||||||| ||||||||| ||| |||||||| |||||||||| Sbjct: 4398 gacccgtcgctgaccttccgccgctcctgccgcgaaggcgtctgcggctcctgcgccatg 4457 Query: 425 aacatcgacggcgacaacgggctggcctgc 454 |||||||||||| | ||| |||||||||| Sbjct: 4458 aacatcgacggccagaacacgctggcctgc 4487
>gb|AY682984.1| Xanthomonas citri succinate dehydrogenase subunit B (sdhB) gene, complete cds Length = 929 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||| ||||| || |||||||| ||||||||||||||||| |||||| | || Sbjct: 207 tgcggcccgatggtcctggacgcgctgatcaagatcaagaacgagatcgacccgacgctg 266 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 | ||||| || |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 267 gcgttccgtcgctcctgccgcgagggcatctgcggctcgtgcgcgatgaacatcgacggc 326
>gb|AE011843.1| Xanthomonas axonopodis pv. citri str. 306, section 221 of 469 of the complete genome Length = 12507 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||| ||||| || |||||||| ||||||||||||||||| |||||| | || Sbjct: 8995 tgcggcccgatggtcctggacgcgctgatcaagatcaagaacgagatcgacccgacgctg 9054 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 | ||||| || |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 9055 gcgttccgtcgctcctgccgcgagggcatctgcggctcgtgcgcgatgaacatcgacggc 9114
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||||||||| || ||||| || || ||||||||||||||| ||| || || | Sbjct: 4362102 tgcggccccatggtcctggacgccctgctgaagatcaagaacgagatcgactcgaccttg 4362161 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 4362162 accttccgccgttcgtgccgcgaaggcatctgcgggtcgtgcgccatgaacatcgacggc 4362221
>gb|DQ145263.1| Drosophila miranda neo-Y SdhB gene, partial sequence Length = 1190 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 313 cgactgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtc 372 |||||| |||||||||||||| || |||||| ||||||||||||||||| ||| ||| | Sbjct: 441 cgactgtggccccatggtgctggatgcgctcatcaagatcaagaacgagatggatccgac 500 Query: 373 cctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaa 426 || ||||| || || ||||||||||| || |||||| |||||||||||| Sbjct: 501 tctgacctttcgtcgctcgtgccgcgagggaatttgcggctcctgcgccatgaa 554
>gb|DQ145262.1| Drosophila miranda neo-X SdhB gene, partial sequence Length = 1190 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 313 cgactgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtc 372 |||||| |||||||||||||| || |||||| ||||||||||||||||| ||| ||| | Sbjct: 441 cgactgtggccccatggtgctggatgcgctcatcaagatcaagaacgagatggatccgac 500 Query: 373 cctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaa 426 || ||||| || || ||||||||||| || |||||| |||||||||||| Sbjct: 501 tctgacctttcgtcgctcgtgccgcgagggtatttgcggctcctgcgccatgaa 554
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||||||| Sbjct: 552748 accttccgccgctcctgccgcgaaggcgtctgcggctcctgcgcgatgaacatcgacggc 552689 Query: 437 gacaacgggctggcctgc 454 || ||| |||||||||| Sbjct: 552688 gagaacacgctggcctgc 552671
>emb|BX050802.1|CNS09BD2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 741 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 369 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 428 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 429 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 482
>emb|BX049613.1|CNS09AG1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 831 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Minus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 609 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 550 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 549 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 496
>emb|BX049612.1|CNS09AG0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 904 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 386 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 445 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 446 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 499
>emb|BX042376.1|CNS094V0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14BE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 796 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 369 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 428 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 429 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 482
>emb|BX014229.1|CNS08J55 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21BE01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 897 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 350 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 409 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 410 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 463
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||||||| Sbjct: 78192 accttccgccgctcctgccgcgaaggcgtctgcggctcctgcgcgatgaacatcgacggc 78133 Query: 437 gacaacgggctggcctgc 454 || ||| |||||||||| Sbjct: 78132 gagaacacgctggcctgc 78115
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 |||||| || ||||| || |||||||| ||||||||||||||||| || || |||| Sbjct: 766389 ctgcgggccgatggttctggacgcgctgatcaagatcaagaacgagattgatcccaccct 766330 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacgg 435 |||||||||||| ||||||||| ||||||||||| |||||| ||||| |||| ||| Sbjct: 766329 caccttccgccgctcctgccgcgaaggcatctgcgggtcctgcgcgatgaatatcggcgg 766270 Query: 436 cg 437 || Sbjct: 766269 cg 766268 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcgccgccgccgccctca 214 |||||||||||||||||||| Sbjct: 1027615 ccgcgccgccgccgccctca 1027596
>ref|XM_308512.2| Anopheles gambiae str. PEST ENSANGP00000024398 (ENSANGG00000013539), partial mRNA Length = 762 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 90 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgct 149 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 150 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 203
>gb|AF042062.1|AF042062 Mycosphaerella graminicola succinate dehydrogenase iron-sulphur protein gene, complete cds Length = 3486 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 349 gatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctg 408 ||||||||||||| ||||||| || | || ||||| |||| ||| | ||||| || || Sbjct: 1101 gatcaagaacgaggtggacccgaccttgacattccgaaggagttgcagagagggtatttg 1160 Query: 409 cggcagctgcgccatgaacatcgacggcgacaac 442 ||||||||| ||||||||||||||||||| |||| Sbjct: 1161 cggcagctgtgccatgaacatcgacggcgtcaac 1194
>ref|XM_654844.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2332.2), mRNA Length = 822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 319 cggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcac 378 |||||| ||| |||| ||||||||| || ||||||||||| ||||| |||| || Sbjct: 207 cggccctatgatgctggacgcgctcatccgcatcaagaacgaaatcgaccccaccctgac 266 Query: 379 cttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacgg 435 |||||| || || ||||| ||||| |||||||| |||||||| |||||||||||||| Sbjct: 267 cttccgacgaagttgccgtgagggtatctgcggtagctgcgcgatgaacatcgacgg 323
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 313 cgactgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtc 372 |||||||||||| ||||| || ||||||||| ||||||||| ||||| |||||| | Sbjct: 1422766 cgactgcggcccgatggttctggacgcgctcaacaagatcaaaaacgaaatcgacccgac 1422825 Query: 373 cctcaccttccgccggagctgccgcgagggcatctgcggc 412 ||| |||| ||| || |||||||||||||||||||||| Sbjct: 1422826 cctgacctaccggcgctcctgccgcgagggcatctgcggc 1422865
>gb|AY181036.1| Methylobacterium extorquens succinate dehydrogenase gamma subunit (sdhC), succinate dehydrogenase delta subunit, succinate dehydrogenase alpha subunit (sdhA), and succinate dehydrogenase beta subunit (sdhB) genes, complete cds Length = 4163 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 391 ctgccgcgagggcatctgcggcagctgcgccatgaacatcga 432 ||||||||||||||||||||| |||||||||||||||||| Sbjct: 3575 ctgccgcgagggcatctgcggttcctgcgccatgaacatcga 3616
>emb|BX042150.1|CNS094OQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14AC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 365 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccct 375 ||||||||| |||||||| | |||||| |||||||||||||||| |||||| | || Sbjct: 138 ctgcggcccgatggtgctggtcgcgctgatcaagatcaagaacgaaatggaccccacgct 197 Query: 376 caccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 198 gacgttccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 251
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 326 atggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgc 385 |||||||| |||||||| |||||||||||||||||||||| || | || || ||||| Sbjct: 239006 atggtgctagacgcgctgatcaagatcaagaacgagcaggatcccacgctgacgttccgg 238947 Query: 386 cggagctgccgcgagggcatctgcgg 411 ||| ||||| |||||||||||||| Sbjct: 238946 cggtcttgccgtgagggcatctgcgg 238921
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| ||||||||| ||| | |||||| |||||| ||||||||||||||| Sbjct: 369337 accttccgccgctcctgccgcgaaggcgtgtgcggctcctgcgcgatgaacatcgacggc 369278 Query: 437 gacaacgggctggcctgc 454 || ||| |||||||||| Sbjct: 369277 gagaacacgctggcctgc 369260
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 60.0 bits (30), Expect = 8e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 ||||| || ||||||||||||||||| || |||||||||| || |||||| | || Sbjct: 3398587 tgcgggccgatggtgctcgacgcgctgctgtggatcaagaacaagatcgacccgacgctg 3398528 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||| ||||| ||||||||| || || |||||| ||| |||||||||||||||||| Sbjct: 3398527 accttgcgccgctcctgccgcgaagggatttgcggctcctgtgccatgaacatcgacggc 3398468 Query: 437 gacaacgggctggcctgc 454 |||| |||||||||| Sbjct: 3398467 tccaacacgctggcctgc 3398450
>ref|NM_208692.1| Eremothecium gossypii ACL065Cp (ACL065C), mRNA Length = 786 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 326 atggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttccgc 385 |||||||| |||||||| |||||||||||||||||||||| || | || || ||||| Sbjct: 178 atggtgctagacgcgctgatcaagatcaagaacgagcaggatcccacgctgacgttccgg 237 Query: 386 cggagctgccgcgagggcatctgcgg 411 ||| ||||| |||||||||||||| Sbjct: 238 cggtcttgccgtgagggcatctgcgg 263
>gb|DQ213695.1| Taeniopygia guttata clone 0058P0019H12 succinate dehydrogenase Ip subunit-like mRNA, complete sequence Length = 1001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 323 cccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttc 382 |||||||||||||| || || ||||||||||||||||| |||| | | || |||||| Sbjct: 218 cccatggtgctcgatgccctgatcaagatcaagaacgagatggactccacgctgaccttc 277 Query: 383 cgccggagctgccgcgagggcatctgcggcagctgcgccatgaac 427 ||| || |||| | ||||| ||||||||| ||||||||||||| Sbjct: 278 cgcaggtcctgcagggaggggatctgcggctcctgcgccatgaac 322
>ref|XM_450687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1057 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 498 cgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 ||||||| || ||||||| |||||| | |||||||||||||||| |||||| ||||| Sbjct: 512 cgccgctgccccacatgtacgtcgtgagggacctcgtcgtcgacctgaccagcttct 568
>emb|BX050803.1|CNS09BD3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 604 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||| |||||||| |||||||| |||||||||||||||| |||||| | || Sbjct: 604 tgcggcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgctg 545 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || ||||||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 544 acgttccgccggtcgtgccgcgaaggcatatgtggctcgtgcgccatgaacat 492
>emb|BX042377.1|CNS094V1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC14BE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacga 360 ||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 627 ctgcggcccgatggtgctggacgcgctgatcaagatcaagaacga 583
>emb|BX016593.1|CNS08KYT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA24DH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 445 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 321 gccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcacct 380 |||| |||||||| |||||||| |||||||||||||||| |||||| | || || | Sbjct: 161 gcccgatggtgctggacgcgctgatcaagatcaagaacgaaatggaccccacgctgacgt 220 Query: 381 tccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 |||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 221 tccgccggtcgtgccgcgaaggcatctgtggctcgtgcgccatgaacat 269
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 365 gacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatg 424 |||||| |||| ||||||||||| ||||||||| ||| | |||||| ||||| ||| Sbjct: 241734 gacccgaccctgaccttccgccgctcctgccgcgaaggcgtgtgcggctcgtgcgcgatg 241675 Query: 425 aacatcgacggcgacaacgggctggcctg 453 |||||||||||||| ||| ||||||||| Sbjct: 241674 aacatcgacggcgagaacacgctggcctg 241646
>emb|CR937744.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YG14AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 802 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacga 360 ||||||||| ||||||||||| || ||| |||||||||||||||| Sbjct: 269 ctgcggcccgatggtgctcgatgccctcatcaagatcaagaacga 313
>emb|CR937488.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YA03AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 803 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacga 360 ||||||||| ||||||||||| || ||| |||||||||||||||| Sbjct: 270 ctgcggcccgatggtgctcgatgccctcatcaagatcaagaacga 314
>emb|CR937246.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YI19AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 808 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacga 360 ||||||||| ||||||||||| || ||| |||||||||||||||| Sbjct: 270 ctgcggcccgatggtgctcgatgccctcatcaagatcaagaacga 314
>emb|CR937103.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB2YO05AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 695 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 316 ctgcggccccatggtgctcgacgcgctcctcaagatcaagaacga 360 ||||||||| ||||||||||| || ||| |||||||||||||||| Sbjct: 271 ctgcggcccgatggtgctcgatgccctcatcaagatcaagaacga 315
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 498 cgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 ||||||| || ||||||| |||||| | |||||||||||||||| |||||| ||||| Sbjct: 12242468 cgccgctgccccacatgtacgtcgtgagggacctcgtcgtcgacctgaccagcttct 12242412
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 498 cgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 ||||||| || ||||||| |||||| | |||||||||||||||| |||||| ||||| Sbjct: 26022 cgccgctgccccacatgtacgtcgtgagggacctcgtcgtcgacctgaccagcttct 25966
>dbj|AK108199.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C10, full insert sequence Length = 1057 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 498 cgccgctcccgcacatgttcgtcgtcaaggacctcgtcgtcgacatgaccaacttct 554 ||||||| || ||||||| |||||| | |||||||||||||||| |||||| ||||| Sbjct: 512 cgccgctgccccacatgtacgtcgtgagggacctcgtcgtcgacctgaccagcttct 568
>gb|AY661544.1| Xanthomonas oryzae pv. oryzae succinate dehydrogenase membrane anchor subunit (sdhC), succinate dehydrogenase membrane anchor subunit (sdhD), succinate dehydrogenase flavoprotein subunit (sdhA), and succinate dehydrogenase iron-sulfur subunit (sdhB) genes, complete cds Length = 3616 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 391 ctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 3067 ctgccgcgagggcatttgcggctcgtgcgcaatgaacatcgacggc 3112
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||||| ||||| || |||||||| ||||||||||||||||| |||||| | || Sbjct: 2576601 tgcggcccgatggtcctggacgcgctgatcaagatcaagaacgagatcgacccgacgctg 2576660 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatc 430 | ||||| || ||||||||||||||| |||||| ||||| ||||||||| Sbjct: 2576661 gcgttccgtcgctcctgccgcgagggcatttgcggctcgtgcgcgatgaacatc 2576714
>ref|XM_748512.1| Aspergillus fumigatus Af293 succinate dehydrogenase iron-sulphur protein (Afu5g10370) partial mRNA Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 398 gagggcatctgcggcagctgcgccatgaacatcgacgg 435 ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 364 gagggtatctgcggtagctgcgccatgaacattgacgg 401
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 391 ctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 2423834 ctgccgcgagggcatttgcggctcgtgcgcaatgaacatcgacggc 2423789
>ref|NM_133112.1| Drosophila melanogaster CG7349-RA (CG7349), mRNA Length = 1890 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||| |||||||||| || || || ||||||||||||||||| |||||| | || Sbjct: 792 tgcggcgccatggtgctggatgccctgatcaagatcaagaacgagatggaccccacgctg 851 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatc 430 ||||| | || ||| |||||||||||||||||| |||||| ||||||||| Sbjct: 852 acctttaggcgctcctgtcgcgagggcatctgcggctcctgcgcgatgaacatc 905
>gb|AY089563.1| Drosophila melanogaster RE03249 full insert cDNA Length = 1905 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||| |||||||||| || || || ||||||||||||||||| |||||| | || Sbjct: 793 tgcggcgccatggtgctggatgccctgatcaagatcaagaacgagatggaccccacgctg 852 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatc 430 ||||| | || ||| |||||||||||||||||| |||||| ||||||||| Sbjct: 853 acctttaggcgctcctgtcgcgagggcatctgcggctcctgcgcgatgaacatc 906
>gb|AC018490.6| Drosophila melanogaster, chromosome X, region 17E-17F, BAC clone BACR25O02, complete sequence Length = 165098 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||| |||||||||| || || || ||||||||||||||||| |||||| | || Sbjct: 102203 tgcggcgccatggtgctggatgccctgatcaagatcaagaacgagatggaccccacgctg 102262 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatc 430 ||||| | || ||| |||||||||||||||||| |||||| ||||||||| Sbjct: 102263 acctttaggcgctcctgtcgcgagggcatctgcggctcctgcgcgatgaacatc 102316
>emb|CR942628.2| Xenopus tropicalis finished cDNA, clone TNeu087p20 Length = 1080 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 324 ccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctcaccttcc 383 |||||||||| |||||||| ||||||| ||||| ||| |||||| |||| ||||||| Sbjct: 234 ccatggtgctggacgcgctgatcaagattaagaatgagatggaccccaccctgaccttcc 293 Query: 384 gccggagctgccgcgagggcatctgcggcagctgcgccatgaacat 429 || | |||||| ||||| || || ||| ||||||||||||||| Sbjct: 294 gcagatcctgccgagagggtatatgtggctcctgcgccatgaacat 339
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete sequence Length = 297236 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 317 tgcggccccatggtgctcgacgcgctcctcaagatcaagaacgagcaggacccgtccctc 376 |||||| |||||||||| || || || ||||||||||||||||| |||||| | || Sbjct: 137430 tgcggcgccatggtgctggatgccctgatcaagatcaagaacgagatggaccccacgctg 137489 Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatc 430 ||||| | || ||| |||||||||||||||||| |||||| ||||||||| Sbjct: 137490 acctttaggcgctcctgtcgcgagggcatctgcggctcctgcgcgatgaacatc 137543
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 391 ctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||||||| |||||| ||||| ||||||||||||||| Sbjct: 2443906 ctgccgcgagggcatttgcggctcgtgcgcaatgaacatcgacggc 2443861
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 391 ctgccgcgagggcatctgcggcagctgcg 419 ||||||||| ||||||||||||||||||| Sbjct: 1913129 ctgccgcgaaggcatctgcggcagctgcg 1913157
>ref|XM_760644.1| Theileria parva strain Muguga chromosome 1 succinate dehydrogenase iron-sulfur subunit (TP01_0210) partial mRNA Length = 792 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 374 ctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgac 433 ||||| |||||| | ||||| || || ||||| ||||||||||| || |||||||| | Sbjct: 199 ctcacattccgcagaagctgtcgagaaggcatttgcggcagctgtgcaatgaacattaat 258 Query: 434 ggcgacaacgggctggcctgcctca 458 || || ||||| ||||||||||||| Sbjct: 259 ggagaaaacggcctggcctgcctca 283
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcga 432 ||||||||||| ||||||||| ||| | |||||| |||||||||||||||||| Sbjct: 3985937 accttccgccgctcctgccgcgaaggcgtgtgcggctcctgcgccatgaacatcga 3985992
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 518 gtcgtcaaggacctcgtcgtcgac 541 |||||||||||||||||||||||| Sbjct: 64320 gtcgtcaaggacctcgtcgtcgac 64297 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 391 ctgccgcgagggcatctgcggc 412 |||||||||||||||||||||| Sbjct: 64471 ctgccgcgagggcatctgcggc 64450
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 401 ggcatctgcggcagctgcgccatgaacatcgacggc 436 |||||||||||| |||||| ||||||||||||||| Sbjct: 4128441 ggcatctgcggctcctgcgcgatgaacatcgacggc 4128406
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 518 gtcgtcaaggacctcgtcgtcgac 541 |||||||||||||||||||||||| Sbjct: 8718147 gtcgtcaaggacctcgtcgtcgac 8718170 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ctgccgcgagggcatctgcggc 412 |||||||||||||||||||||| Sbjct: 8717996 ctgccgcgagggcatctgcggc 8718017
>dbj|AB112919.1| Cucumis sativus sdhB mRNA for succinate dehydrogenase iron-sulfur protein subunit, partial cds Length = 488 Score = 48.1 bits (24), Expect = 0.031 Identities = 72/88 (81%) Strand = Plus / Plus Query: 345 tcaagatcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggca 404 |||| |||||||||||| |||||||| || ||||||||||| |||||| || || | Sbjct: 138 tcaaaatcaagaacgagatcgacccgtctcttaccttccgccgctcctgccgtgaaggga 197 Query: 405 tctgcggcagctgcgccatgaacatcga 432 ||||||| |||||| ||||||||||| Sbjct: 198 tctgcggttcctgcgcgatgaacatcga 225
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 363 aggacccgtccctcaccttccgccggagctgccgcgagggcatctgcggcagctgcgcca 422 ||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 2834727 aggacccctccctggccttccgctacagctgccgcgaggcgatctgcggctcctgcgcca 2834786 Query: 423 tgaacatc 430 || ||||| Sbjct: 2834787 tgtacatc 2834794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 ctacaaggtggacctctccga 315 ||||||||||||||||||||| Sbjct: 2797822 ctacaaggtggacctctccga 2797842
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 189 cttcccccgcgccgccgccgccc 211 ||||||||||||||||||||||| Sbjct: 179779 cttcccccgcgccgccgccgccc 179801
>ref|XM_960059.1| Neurospora crassa OR74A hypothetical protein (NCU00959.1) partial mRNA Length = 849 Score = 46.1 bits (23), Expect = 0.12 Identities = 71/87 (81%) Strand = Plus / Plus Query: 350 atcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgc 409 |||||||| |||| ||||| |||| ||||||||||| ||||| ||||| |||||| Sbjct: 268 atcaagaatgagctcgaccctacccttaccttccgccgctcgtgccgtgagggtatctgc 327 Query: 410 ggcagctgcgccatgaacatcgacggc 436 || |||||||||||||||| ||||| Sbjct: 328 ggttcctgcgccatgaacatcaacggc 354
>ref|XM_325138.1| Neurospora crassa OR74A hypothetical protein (NCU00959.1) partial mRNA Length = 849 Score = 46.1 bits (23), Expect = 0.12 Identities = 71/87 (81%) Strand = Plus / Plus Query: 350 atcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgc 409 |||||||| |||| ||||| |||| ||||||||||| ||||| ||||| |||||| Sbjct: 268 atcaagaatgagctcgaccctacccttaccttccgccgctcgtgccgtgagggtatctgc 327 Query: 410 ggcagctgcgccatgaacatcgacggc 436 || |||||||||||||||| ||||| Sbjct: 328 ggttcctgcgccatgaacatcaacggc 354
>ref|XM_751898.1| Ustilago maydis 521 succinate dehydrogenase (UM00844.1) partial mRNA Length = 888 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 atggtgctcgacgcgctcctcaagatcaagaacga 360 ||||| |||||||||||| |||| ||||||||||| Sbjct: 250 atggttctcgacgcgctcatcaaaatcaagaacga 284
>emb|Z11738.1|UMSDISSG U.maydis encoding iron-sulphur subunit of succinate dehydrogenase Length = 1145 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 atggtgctcgacgcgctcctcaagatcaagaacga 360 ||||| |||||||||||| |||| ||||||||||| Sbjct: 433 atggttctcgacgcgctcatcaaaatcaagaacga 467
>emb|X62762.1|UMCPXRG U.maydis cbxr gene for carboxin resistance form of succinate dehydrogenase Length = 1771 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 326 atggtgctcgacgcgctcctcaagatcaagaacga 360 ||||| |||||||||||| |||| ||||||||||| Sbjct: 829 atggttctcgacgcgctcatcaaaatcaagaacga 863
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 46.1 bits (23), Expect = 0.12 Identities = 71/87 (81%) Strand = Plus / Plus Query: 350 atcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgc 409 |||||||| |||| ||||| |||| ||||||||||| ||||| ||||| |||||| Sbjct: 34865 atcaagaatgagctcgaccctacccttaccttccgccgctcgtgccgtgagggtatctgc 34924 Query: 410 ggcagctgcgccatgaacatcgacggc 436 || |||||||||||||||| ||||| Sbjct: 34925 ggttcctgcgccatgaacatcaacggc 34951
>dbj|AB225277.1| Aspergillus oryzae cDNA, contig sequence: AoEST2129 Length = 1208 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 350 atcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgc 409 |||||||||||| |||||| |||| |||||||| | || ||||| ||||| ||||| Sbjct: 425 atcaagaacgagatggaccccaccctgaccttccggagaagttgccgtgagggtatctgt 484 Query: 410 ggcagctgcgccatgaacatcga 432 || ||||| || ||||||||||| Sbjct: 485 ggaagctgtgctatgaacatcga 507
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Plus Query: 350 atcaagaacgagcaggacccgtccctcaccttccgccggagctgccgcgagggcatctgc 409 |||||||||||| |||||| |||| |||||||| | || ||||| ||||| ||||| Sbjct: 1355749 atcaagaacgagatggaccccaccctgaccttccggagaagttgccgtgagggtatctgt 1355808 Query: 410 ggcagctgcgccatgaacatcga 432 || ||||| || ||||||||||| Sbjct: 1355809 ggaagctgtgctatgaacatcga 1355831
>emb|AL833776.9| Mouse DNA sequence from clone RP23-478M17 on chromosome X, complete sequence Length = 136414 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 189 cttcccccgcgccgccgccgccc 211 ||||||||||||||||||||||| Sbjct: 114264 cttcccccgcgccgccgccgccc 114286
>ref|NM_189265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 tcctcttcccccgcgccgccgccgcc 210 |||||||||| ||||||||||||||| Sbjct: 428 tcctcttcccacgcgccgccgccgcc 403
>ref|XM_422071.1| PREDICTED: Gallus gallus similar to KIAA1399 protein (LOC424221), mRNA Length = 1116 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccctc 213 |||||||||||||||||||||| Sbjct: 146 cccccgcgccgccgccgccctc 167
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tgccgcgagggcatctgcggca 413 |||||||||||||||||||||| Sbjct: 543678 tgccgcgagggcatctgcggca 543657
>emb|CR590252.1| full-length cDNA clone CS0DI063YL17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1146 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccctc 213 |||||||||||||||||||||| Sbjct: 29 cccccgcgccgccgccgccctc 50
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 ctgccgcgagggcatctgcggc 412 |||||||||||||||||||||| Sbjct: 4133152 ctgccgcgagggcatctgcggc 4133173
>dbj|AB169846.1| Macaca fascicularis brain cDNA, clone: QtrA-12415, similar to human profilin 2 (PFN2), transcript variant 1, mRNA, RefSeq: NM_053024.1 Length = 2151 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 cttcccccgcgccgccgccgcc 210 |||||||||||||||||||||| Sbjct: 18 cttcccccgcgccgccgccgcc 39
>gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q11, complete sequence Length = 184929 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccctc 213 |||||||||||||||||||||| Sbjct: 126522 cccccgcgccgccgccgccctc 126501
>gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q11, complete sequence Length = 168239 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccctc 213 |||||||||||||||||||||| Sbjct: 114633 cccccgcgccgccgccgccctc 114612
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 tcctcttcccccgcgccgccgccgcc 210 |||||||||| ||||||||||||||| Sbjct: 16688251 tcctcttcccacgcgccgccgccgcc 16688276 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cccgcgccgccgccgccctca 214 ||||||||||||||||||||| Sbjct: 9322282 cccgcgccgccgccgccctca 9322262 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 42413566 cccccgcgccgccgccgccc 42413585
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 tcctcttcccccgcgccgccgccgcc 210 |||||||||| ||||||||||||||| Sbjct: 118200 tcctcttcccacgcgccgccgccgcc 118225
>dbj|AK072999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149N01, full insert sequence Length = 2681 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 tcctcttcccccgcgccgccgccgcc 210 |||||||||| ||||||||||||||| Sbjct: 23 tcctcttcccacgcgccgccgccgcc 48
>ref|XM_475967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2568 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 117 ccccgcgccgccgccgccctc 97
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 386 cctcttcccccccgccgccgccgcc 362
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 347 cctcttcccccccgccgccgccgcc 323
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 349 cctcttcccccccgccgccgccgcc 325
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 32581 ccccgcgccgccgccgccctc 32601
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 422 atgaacatcgacggcgacaacgggctggcctgcctcaccaa 462 ||||||||| ||||| | ||||| ||||||||||| ||||| Sbjct: 3805384 atgaacatcaacggcaagaacggcctggcctgcctgaccaa 3805424
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 422 atgaacatcgacggcgacaacgggctggcctgcctcaccaa 462 ||||||||| ||||| | ||||| ||||||||||| ||||| Sbjct: 2561653 atgaacatcaacggcaagaacggcctggcctgcctgaccaa 2561613
>emb|AJ491307.1|RRU491307 Rhodococcus ruber padh gene (partial), sadh gene and sudh gene Length = 2537 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 aaggacctcgtcgtcgacatg 544 ||||||||||||||||||||| Sbjct: 1788 aaggacctcgtcgtcgacatg 1768
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 262 cctcttcccccccgccgccgccgcc 238
>ref|XM_696223.1| PREDICTED: Danio rerio similar to RAS-like, estrogen-regulated, growth inhibitor (LOC572500), mRNA Length = 690 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ttcccccgcgccgccgccgcc 210 ||||||||||||||||||||| Sbjct: 104 ttcccccgcgccgccgccgcc 84
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 28303372 ccccgcgccgccgccgccctc 28303352 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 20815462 tcccccgcgccgccgccgcc 20815481
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 28878288 ccccgcgccgccgccgccctc 28878308
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 35093908 cctcttcccccccgccgccgccgcc 35093932 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 23248358 tcccccgcgccgccgccgcc 23248339 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 1196950 tcttcccccgcgccgccgcc 1196931
>gb|AF275683.1|AF275683 Rattus norvegicus sex-determining region Y protein (Sry2) gene, partial cds Length = 1980 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 ccaccttcccctctcctacctccca 30 |||||||||||||||| |||||||| Sbjct: 849 ccaccttcccctctcccacctccca 825
>gb|AF275682.1|AF275682 Rattus norvegicus sex-determining region Y protein (Sry3) gene, complete cds Length = 2130 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 ccaccttcccctctcctacctccca 30 |||||||||||||||| |||||||| Sbjct: 999 ccaccttcccctctcccacctccca 975
>gb|AE004754.1| Pseudomonas aeruginosa PAO1, section 315 of 529 of the complete genome Length = 10092 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 tggtgctcgacgcgctcctca 347 ||||||||||||||||||||| Sbjct: 4344 tggtgctcgacgcgctcctca 4364
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 ctgccgcgagggcatctgcgg 411 ||||||||||||||||||||| Sbjct: 3310964 ctgccgcgagggcatctgcgg 3310944 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 4224178 cccccgcgccgccgccgccc 4224159 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 1543807 cccgcgccgccgccgccctc 1543826
>gb|AF274872.1|AF274872 Rattus norvegicus sex-determining region Y protein (Sry1) gene, complete cds Length = 2134 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 ccaccttcccctctcctacctccca 30 |||||||||||||||| |||||||| Sbjct: 1003 ccaccttcccctctcccacctccca 979
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 cccgcgccgccgccgccctca 214 ||||||||||||||||||||| Sbjct: 98876 cccgcgccgccgccgccctca 98856
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 15950 ccccgcgccgccgccgccctc 15930
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 101401 ccccgcgccgccgccgccctc 101381
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 154249 cctcttcccccccgccgccgccgcc 154273
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 67071 cctcttcccccccgccgccgccgcc 67095
>dbj|AK107350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H04, full insert sequence Length = 2465 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 242 ccccgcgccgccgccgccctc 222
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 347 cctcttcccccccgccgccgccgcc 323
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 349 cctcttcccccccgccgccgccgcc 325
>dbj|AK072537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N21, full insert sequence Length = 2989 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccctc 213 ||||||||||||||||||||| Sbjct: 243 ccccgcgccgccgccgccctc 223
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctcttcccccgcgccgccgccgcc 210 ||||||||||| ||||||||||||| Sbjct: 386 cctcttcccccccgccgccgccgcc 362
>dbj|AK068395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C11, full insert sequence Length = 2118 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctca 214 ||||||||||||||||||||| Sbjct: 35 cccgcgccgccgccgccctca 55
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 418 cgccatgaacatcgacggcgacaacgggctggcctgcctcaccaa 462 ||||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2170601 cgccatgaacatcaacggcaagaatggtctggcctgcctgaccaa 2170557
>gb|AF479751.1| Ralstonia eutropha BraC protein, citrate synthase (cisY), SdhB protein (sdhB), SdhA protein (sdhA), SdhD protein (sdhD), SdhC protein (sdhC), putative transcriptional regulator, NAD-dependent malate dehydrogenase (mdh), putative lyase protein, and 2-methylcitrate synthase 2 (prpC2) genes, complete cds Length = 12449 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 422 atgaacatcgacggcgacaacgggctggcctgcctcaccaa 462 ||||||||| ||||| | ||||| ||||||||||| ||||| Sbjct: 3963 atgaacatcaacggcaagaacggcctggcctgcctgaccaa 3923
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcgccgccgccgccctca 214 |||||||||||||||||||| Sbjct: 144602 ccgcgccgccgccgccctca 144583 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcgccgccgccgccctca 214 |||||||||||||||||||| Sbjct: 129407 ccgcgccgccgccgccctca 129426
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 392 tgccgcgagggcatctgcggcagctgcgccatgaacatcgacgg 435 ||||||||||| ||||||||| ||| || ||||| |||||||| Sbjct: 373577 tgccgcgaggggatctgcggctcctgtgcgatgaatatcgacgg 373620
>ref|XM_466548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 507 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 137 tcccccgcgccgccgccgcc 118
>ref|XM_463929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1315 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 107 tcttcccccgcgccgccgcc 126
>ref|XM_506696.1| PREDICTED Oryza sativa (japonica cultivar-group), P0575F10.6-2 mRNA Length = 1328 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 108 tcttcccccgcgccgccgcc 127
>ref|NM_189369.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 309 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 31 cccccgcgccgccgccgccc 12
>ref|XM_515927.1| PREDICTED: Pan troglodytes similar to Homeobox protein Hox-D11 (Hox-4F) (LOC459761), mRNA Length = 933 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 307 cccccgcgccgccgccgccc 288
>gb|BT016776.1| Zea mays clone Contig609 mRNA sequence Length = 1943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 890 tcccccgcgccgccgccgcc 871
>ref|NM_053024.3| Homo sapiens profilin 2 (PFN2), transcript variant 1, mRNA Length = 2117 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 10 cccccgcgccgccgccgccc 29
>ref|NM_002628.4| Homo sapiens profilin 2 (PFN2), transcript variant 2, mRNA Length = 1795 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 10 cccccgcgccgccgccgccc 29
>gb|DQ020476.1| Sus scrofa sterol regulatory element binding protein 2 (SREBP-2) mRNA, partial cds Length = 3106 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgccaccttcccctctcctacctc 27 ||||||||||||||||||| |||| Sbjct: 2517 cgccaccttcccctctccttcctc 2540
>gb|AY207496.1| Chlamydomonas reinhardtii CR051 protein gene, complete cds Length = 6868 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 1698 cccccgcgccgccgccgccc 1717
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 377 accttccgccggagctgccgcgagggcatctgcggcagctgcgccatgaacatcgacggc 436 ||||||||||| |||||||||||| | ||||| |||||||||||||||| ||||| Sbjct: 3038694 accttccgccgctcctgccgcgagggtgtatgcggttcctgcgccatgaacatcaacggc 3038753
>gb|AF033817.1| Human T-cell lymphotropic virus 1, complete genome Length = 8507 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccctcatc 216 |||||||||||||||||| ||||| Sbjct: 740 ccccgcgccgccgccgccgtcatc 763
>ref|XR_003119.1| PREDICTED: Mus musculus similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) (LOC670773), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 498 ccccgcgccgccgccgccct 479
>ref|XR_004800.1| PREDICTED: Mus musculus similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) (LOC675555), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 498 ccccgcgccgccgccgccct 479
>ref|XM_990287.1| PREDICTED: Mus musculus hypothetical protein LOC667390 (LOC667390), mRNA Length = 978 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 498 ccccgcgccgccgccgccct 479
>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence Length = 220622 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccttcccctctcctacctcc 28 |||||||||||||||||||| Sbjct: 16787 ccttcccctctcctacctcc 16806
>ref|XM_544055.2| PREDICTED: Canis familiaris similar to Homeobox protein HMX2 (Homeobox protein Nkx-5.2) (LOC486925), mRNA Length = 856 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 297 ccccgcgccgccgccgccct 278
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccatggtgctcgacgcgctc 343 |||||||||||||||||||| Sbjct: 1870818 ccatggtgctcgacgcgctc 1870799
>gb|AC142098.2| Mus musculus BAC clone RP24-458F14 from chromosome 19, complete sequence Length = 193811 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cttcccctctcctacctccc 29 |||||||||||||||||||| Sbjct: 110362 cttcccctctcctacctccc 110343
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cttcccctctcctacctccc 29 |||||||||||||||||||| Sbjct: 186262 cttcccctctcctacctccc 186281
>gb|AC006644.1| Caenorhabditis elegans cosmid F55A3, complete sequence Length = 30973 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 caaaaataaaggagaaaaag 48 |||||||||||||||||||| Sbjct: 16045 caaaaataaaggagaaaaag 16064
>gb|AC164971.2| Mus musculus BAC clone RP23-441D19 from chromosome 9, complete sequence Length = 213482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcccctctcctacctcc 28 |||||||||||||||||||| Sbjct: 74368 ccttcccctctcctacctcc 74349
>emb|AL671561.7| Human DNA sequence from clone XXbac-209H21 on chromosome 6 contains a HLA (MHC) class 1 pseudogene, a putative novel MHC class 1 (HLA) protein (fragment), a 60S ribosomal protein L7A (RPL7A) pseudogene, a P5-1 pseudogene, the HLA-G gene for histompatibility antigen, class I, G, a major histocompatibility complex, class I, H pseudogene (HLA-H, HLAHP) and five CpG islands, complete sequence Length = 105633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 64679 tcccccgcgccgccgccgcc 64660
>emb|Z75271.1|SCYOR363C S.cerevisiae chromosome XV reading frame ORF YOR363c Length = 4624 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 acctcccaaaaataaaggagaaaa 46 |||||||| ||||||||||||||| Sbjct: 2302 acctcccagaaataaaggagaaaa 2279
>emb|X91991.1|SCPIP2GEN S.cerevisiae pip2 gene Length = 3471 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 acctcccaaaaataaaggagaaaa 46 |||||||| ||||||||||||||| Sbjct: 2576 acctcccagaaataaaggagaaaa 2599
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcggaggcggccggtgcct 488 |||||||||||||||||||| Sbjct: 3546051 ctcggaggcggccggtgcct 3546032
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 cctcccaaaaataaaggagaaaaa 47 |||||| ||||||||||||||||| Sbjct: 37625 cctccccaaaataaaggagaaaaa 37648
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 419 gccatgaacatcgacggcgacaacgggctggcctgc 454 |||||||||||| ||||| | ||||| ||||||||| Sbjct: 67404 gccatgaacatcaacggcaagaacggcctggcctgc 67369
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 419 gccatgaacatcgacggcgacaacgggctggcctgc 454 |||||||||||| ||||| | ||||| ||||||||| Sbjct: 67568 gccatgaacatcaacggcaagaacggcctggcctgc 67533
>gb|BC043646.1| Homo sapiens profilin 2, transcript variant 1, mRNA (cDNA clone MGC:43904 IMAGE:5274799), complete cds Length = 2276 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 167 cccccgcgccgccgccgccc 186
>emb|BX324005.11| Zebrafish DNA sequence from clone DKEY-115F6 in linkage group 13, complete sequence Length = 66154 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ccaaaaataaaggagaaaaa 47 |||||||||||||||||||| Sbjct: 21339 ccaaaaataaaggagaaaaa 21358
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 107584 cccccgcgccgccgccgccc 107565
>emb|CR609064.1| full-length cDNA clone CS0DH005YJ17 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 3028 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cgccgccgccgccctcatcgaagc 221 |||||||||||||| ||||||||| Sbjct: 13 cgccgccgccgcccgcatcgaagc 36
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 100054 cccccgcgccgccgccgccc 100035
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 48480 cccccgcgccgccgccgccc 48461
>dbj|AK147768.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270029H08 product:ring finger protein (C3HC4 type) 19, full insert sequence Length = 4264 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 194 ccccgcgccgccgccgccct 213
>ref|XM_939576.1| PREDICTED: Homo sapiens KIAA1957 (KIAA1957), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cgccgccgccgccctcatcgaagc 221 |||||||||||||| ||||||||| Sbjct: 127 cgccgccgccgcccgcatcgaagc 150
>ref|XM_065166.3| PREDICTED: Homo sapiens KIAA1957 (KIAA1957), mRNA Length = 3327 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cgccgccgccgccctcatcgaagc 221 |||||||||||||| ||||||||| Sbjct: 253 cgccgccgccgcccgcatcgaagc 276
>dbj|AK166197.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830012N14 product:ring finger protein (C3HC4 type) 19, full insert sequence Length = 1137 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 194 ccccgcgccgccgccgccct 213
>ref|NM_060420.3| Caenorhabditis elegans F55A3.3 (F55A3.3) mRNA, complete cds Length = 3346 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 caaaaataaaggagaaaaag 48 |||||||||||||||||||| Sbjct: 1171 caaaaataaaggagaaaaag 1190
>dbj|AK082665.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230080H10 product:RING FINGER PROTEIN 19 (XY BODY PROTEIN) (XYBP) (GAMETOGENESIS EXPRESSED PROTEIN GEG-154) (UBCM4-INTERACTING PROTEIN 117) (UIP117) homolog [Mus musculus], full insert sequence Length = 3454 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 158 ccccgcgccgccgccgccct 177
>gb|AC010616.5|AC010616 Homo sapiens chromosome 19 clone CTD-2575K13, complete sequence Length = 171849 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 89905 tcccccgcgccgccgccgcc 89886
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 17972465 cccgcgccgccgccgccctc 17972446
>gb|AC079031.39| Homo sapiens 12 BAC RP11-503G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89059 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 61824 tcccccgcgccgccgccgcc 61843
>gb|AC116482.11| Mus musculus chromosome 8, clone RP23-423D8, complete sequence Length = 202027 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ccaccttcccctctcctacc 25 |||||||||||||||||||| Sbjct: 147959 ccaccttcccctctcctacc 147978
>gb|AC008988.13| Homo sapiens chromosome 19 clone LLNLF-215A5, complete sequence Length = 34210 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 cgccgccgccgccctcatcgaagc 221 |||||||||||||| ||||||||| Sbjct: 20207 cgccgccgccgcccgcatcgaagc 20184
>gb|AF218053.1|AF218053 Desulfovibrio gigas rubredoxin-oxygen oxidoreductase (roo) gene, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ccgccctcatcgaagcctgc 225 |||||||||||||||||||| Sbjct: 266 ccgccctcatcgaagcctgc 285
>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 91648 cccccgcgccgccgccgccc 91629
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 72904 cccccgcgccgccgccgccc 72923
>gb|AF335495.1| Homo sapiens mucin (MUC8) gene, sequence Length = 16709 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 16126 tcccccgcgccgccgccgcc 16107
>gb|AF154915.1|AF154915 Homo sapiens transcription factor HOXD12 (HOXD12) and transcription factor HOXD11 (HOXD11) genes, complete cds Length = 10469 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 8489 cccccgcgccgccgccgccc 8470
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 2090369 tcccccgcgccgccgccgcc 2090388
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gcgccgccgccgccctcatc 216 |||||||||||||||||||| Sbjct: 2936334 gcgccgccgccgccctcatc 2936315
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 70137 tcccccgcgccgccgccgcc 70156
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 28041 tcttcccccgcgccgccgcc 28022
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_D02 Length = 112773 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 7504 tcccccgcgccgccgccgcc 7485
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 105589 tcccccgcgccgccgccgcc 105570
>dbj|AK121372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126J16, full insert sequence Length = 1328 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 108 tcttcccccgcgccgccgcc 127
>dbj|AK099965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M09, full insert sequence Length = 1718 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 84 cccgcgccgccgccgccctc 103
>dbj|AK070912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064I01, full insert sequence Length = 1672 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 65 cccgcgccgccgccgccctc 84
>dbj|AK065148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B03, full insert sequence Length = 1754 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 108 tcttcccccgcgccgccgcc 127
>dbj|AK062255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G07, full insert sequence Length = 1314 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcccccgcgccgccgcc 207 |||||||||||||||||||| Sbjct: 107 tcttcccccgcgccgccgcc 126
>dbj|AK061740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E11, full insert sequence Length = 1437 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 29 tcccccgcgccgccgccgcc 48
>dbj|AK059165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E01, full insert sequence Length = 588 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 169 cccccgcgccgccgccgccc 150
>emb|AL160192.3|CNS01RGU Human chromosome 14 DNA sequence BAC R-226P1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185228 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 caaaaataaaggagaaaaag 48 |||||||||||||||||||| Sbjct: 43522 caaaaataaaggagaaaaag 43503
>ref|NM_021192.2| Homo sapiens homeobox D11 (HOXD11), mRNA Length = 1463 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cccccgcgccgccgccgccc 211 |||||||||||||||||||| Sbjct: 304 cccccgcgccgccgccgccc 285
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 ccgcgccgccgccgccctcatcga 218 |||||||| ||||||||||||||| Sbjct: 4783689 ccgcgccgtcgccgccctcatcga 4783712 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 caagatctcctcggaggcggccgg 483 ||||||| |||||||||||||||| Sbjct: 3787658 caagatcacctcggaggcggccgg 3787681
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 17898784 cccgcgccgccgccgccctc 17898765
>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124294 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 113227 cccgcgccgccgccgccctc 113246
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cccgcgccgccgccgccctc 213 |||||||||||||||||||| Sbjct: 26091 cccgcgccgccgccgccctc 26110
>gb|AC147366.5| Mus musculus BAC clone RP23-386J3 from 15, complete sequence Length = 175781 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccct 212 |||||||||||||||||||| Sbjct: 77702 ccccgcgccgccgccgccct 77721
>gb|L02534.1|HTVMEL5 Human T-cell leukemia virus type 1 Melanesian variant (mel5) proviral DNA sequence Length = 9039 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccctcatc 216 |||||||||||||||||| ||||| Sbjct: 1096 ccccgcgccgccgccgccgtcatc 1119
>dbj|D13784.1|HTVPRCAR Human T-cell lymphotropic virus type 1 proviral DNA, complete genome Length = 8400 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 ccccgcgccgccgccgccctcatc 216 |||||||||||||||||| ||||| Sbjct: 1093 ccccgcgccgccgccgccgtcatc 1116
>dbj|AB075837.1| Homo sapiens mRNA for KIAA1957 protein Length = 2976 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cgccgccgccgccctcatcgaagc 221 |||||||||||||| ||||||||| Sbjct: 44 cgccgccgccgcccgcatcgaagc 67
>dbj|AB023057.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:779F20, complete sequence Length = 81561 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcccccgcgccgccgccgcc 210 |||||||||||||||||||| Sbjct: 56559 tcccccgcgccgccgccgcc 56578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,977,147 Number of Sequences: 3902068 Number of extensions: 3977147 Number of successful extensions: 126428 Number of sequences better than 10.0: 227 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 119598 Number of HSP's gapped (non-prelim): 6803 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
